Metagenome / Metatranscriptome Family F071107

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071107
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	42 residues
Representative Sequence	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGATSTTLGRIS
Number of Associated Samples	78
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.07 %
% of genes near scaffold ends (potentially truncated)	88.52 %
% of genes from short scaffolds (< 2000 bps)	84.43 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.328 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (59.836 % of family members)
Environment Ontology (ENVO)	Unclassified (79.508 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (59.836 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.29% β-sheet: 0.00% Coil/Unstructured: 64.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01381	HTH_3	4.10
PF07883	Cupin_2	3.28
PF00582	Usp	2.46
PF00196	GerE	2.46
PF08031	BBE	2.46
PF13191	AAA_16	1.64
PF00496	SBP_bac_5	1.64
PF00400	WD40	0.82
PF00589	Phage_integrase	0.82
PF04978	DUF664	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.46

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
All Organisms	root	All Organisms	19.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
cellular organisms	root	All Organisms → cellular organisms	19.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.57 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.84 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.64 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.82 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.82 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.84 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.64 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.82 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.82 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.82 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.84 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	1.64 %
Paeniglutamicibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Paeniglutamicibacter	0.82 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.82 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.82 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.84 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	1.64 %
Paeniglutamicibacter quisquiliarum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Paeniglutamicibacter → Paeniglutamicibacter quisquiliarum	0.82 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.82 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.82 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.84 %
Rhodococcus sp. WB9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. WB9	1.64 %
Paeniglutamicibacter quisquiliarum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Paeniglutamicibacter → Paeniglutamicibacter quisquiliarum	0.82 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.82 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.82 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_102548311	Not Available	930	Open in IMG/M
3300005363\|Ga0008090_15517016	Not Available	744	Open in IMG/M
3300005764\|Ga0066903_101743819	Not Available	1187	Open in IMG/M
3300006028\|Ga0070717_10789212	Not Available	864	Open in IMG/M
3300006052\|Ga0075029_101044026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300006755\|Ga0079222_10519147	Not Available	880	Open in IMG/M
3300006939\|Ga0081244_1482634	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300009698\|Ga0116216_10102761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1759	Open in IMG/M
3300010047\|Ga0126382_10047937	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2481	Open in IMG/M
3300010358\|Ga0126370_11063261	Not Available	743	Open in IMG/M
3300010361\|Ga0126378_13375879	Not Available	507	Open in IMG/M
3300010366\|Ga0126379_10832021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1023	Open in IMG/M
3300010376\|Ga0126381_100306949	Not Available	2175	Open in IMG/M
3300010376\|Ga0126381_101558766	Not Available	955	Open in IMG/M
3300010376\|Ga0126381_102607902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300010398\|Ga0126383_11671875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	726	Open in IMG/M
3300010398\|Ga0126383_12016297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300010398\|Ga0126383_12192900	Not Available	639	Open in IMG/M
3300012199\|Ga0137383_11269454	Not Available	526	Open in IMG/M
3300012971\|Ga0126369_10584806	Not Available	1185	Open in IMG/M
3300012971\|Ga0126369_12047302	Not Available	660	Open in IMG/M
3300016294\|Ga0182041_10830878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300016294\|Ga0182041_11212313	Not Available	688	Open in IMG/M
3300016341\|Ga0182035_10545197	Not Available	996	Open in IMG/M
3300016357\|Ga0182032_10262444	Not Available	1348	Open in IMG/M
3300016387\|Ga0182040_10648312	Not Available	859	Open in IMG/M
3300016422\|Ga0182039_12226862	Not Available	506	Open in IMG/M
3300027898\|Ga0209067_10965598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300031544\|Ga0318534_10247162	Not Available	1029	Open in IMG/M
3300031545\|Ga0318541_10404705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300031545\|Ga0318541_10820021	Not Available	519	Open in IMG/M
3300031546\|Ga0318538_10567786	Not Available	615	Open in IMG/M
3300031546\|Ga0318538_10745676	Not Available	531	Open in IMG/M
3300031549\|Ga0318571_10062607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1139	Open in IMG/M
3300031561\|Ga0318528_10298888	Not Available	864	Open in IMG/M
3300031572\|Ga0318515_10030475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2628	Open in IMG/M
3300031573\|Ga0310915_10499562	Not Available	864	Open in IMG/M
3300031573\|Ga0310915_10558681	Not Available	812	Open in IMG/M
3300031640\|Ga0318555_10545010	Not Available	629	Open in IMG/M
3300031640\|Ga0318555_10727167	Not Available	536	Open in IMG/M
3300031679\|Ga0318561_10343891	Not Available	818	Open in IMG/M
3300031679\|Ga0318561_10737667	Not Available	541	Open in IMG/M
3300031680\|Ga0318574_10292103	Not Available	947	Open in IMG/M
3300031682\|Ga0318560_10125303	Not Available	1347	Open in IMG/M
3300031724\|Ga0318500_10081280	Not Available	1443	Open in IMG/M
3300031747\|Ga0318502_10418272	Not Available	798	Open in IMG/M
3300031751\|Ga0318494_10117580	Not Available	1479	Open in IMG/M
3300031751\|Ga0318494_10209097	Not Available	1113	Open in IMG/M
3300031751\|Ga0318494_10771077	Not Available	563	Open in IMG/M
3300031764\|Ga0318535_10422176	Not Available	594	Open in IMG/M
3300031765\|Ga0318554_10216641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1090	Open in IMG/M
3300031768\|Ga0318509_10529274	Not Available	658	Open in IMG/M
3300031770\|Ga0318521_10569605	Not Available	684	Open in IMG/M
3300031770\|Ga0318521_10800155	Not Available	574	Open in IMG/M
3300031771\|Ga0318546_10391292	Not Available	970	Open in IMG/M
3300031778\|Ga0318498_10093216	Not Available	1363	Open in IMG/M
3300031778\|Ga0318498_10124706	Not Available	1171	Open in IMG/M
3300031778\|Ga0318498_10336338	Not Available	675	Open in IMG/M
3300031778\|Ga0318498_10560661	Not Available	501	Open in IMG/M
3300031779\|Ga0318566_10634689	Not Available	519	Open in IMG/M
3300031781\|Ga0318547_10145711	Not Available	1389	Open in IMG/M
3300031782\|Ga0318552_10054388	Not Available	1904	Open in IMG/M
3300031793\|Ga0318548_10077230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1568	Open in IMG/M
3300031793\|Ga0318548_10231577	Not Available	907	Open in IMG/M
3300031793\|Ga0318548_10653186	Not Available	510	Open in IMG/M
3300031796\|Ga0318576_10134873	Not Available	1146	Open in IMG/M
3300031796\|Ga0318576_10290614	Not Available	772	Open in IMG/M
3300031798\|Ga0318523_10329818	Not Available	761	Open in IMG/M
3300031799\|Ga0318565_10310915	Not Available	765	Open in IMG/M
3300031821\|Ga0318567_10601510	Not Available	624	Open in IMG/M
3300031835\|Ga0318517_10072045	Not Available	1484	Open in IMG/M
3300031835\|Ga0318517_10241372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300031880\|Ga0318544_10028924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Paeniglutamicibacter → Paeniglutamicibacter quisquiliarum	1914	Open in IMG/M
3300031880\|Ga0318544_10179749	Not Available	815	Open in IMG/M
3300031880\|Ga0318544_10447674	Not Available	503	Open in IMG/M
3300031890\|Ga0306925_10031577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5409	Open in IMG/M
3300031890\|Ga0306925_10077108	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3516	Open in IMG/M
3300031890\|Ga0306925_12131516	Not Available	524	Open in IMG/M
3300031897\|Ga0318520_10100937	Not Available	1619	Open in IMG/M
3300031910\|Ga0306923_11407600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. WB9	734	Open in IMG/M
3300031910\|Ga0306923_11794918	Not Available	630	Open in IMG/M
3300031910\|Ga0306923_11865421	Not Available	615	Open in IMG/M
3300031910\|Ga0306923_12157635	Not Available	560	Open in IMG/M
3300031912\|Ga0306921_10429290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	1541	Open in IMG/M
3300031912\|Ga0306921_11535390	Not Available	726	Open in IMG/M
3300031941\|Ga0310912_10881837	Not Available	689	Open in IMG/M
3300031941\|Ga0310912_11409512	Not Available	526	Open in IMG/M
3300031942\|Ga0310916_10232195	Not Available	1551	Open in IMG/M
3300031945\|Ga0310913_11081595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300031946\|Ga0310910_10720115	Not Available	788	Open in IMG/M
3300031946\|Ga0310910_11144725	Not Available	605	Open in IMG/M
3300031954\|Ga0306926_11615408	Not Available	743	Open in IMG/M
3300032008\|Ga0318562_10256819	Not Available	1015	Open in IMG/M
3300032009\|Ga0318563_10451361	Not Available	695	Open in IMG/M
3300032043\|Ga0318556_10624040	Not Available	562	Open in IMG/M
3300032043\|Ga0318556_10724025	Not Available	517	Open in IMG/M
3300032044\|Ga0318558_10045583	Not Available	1919	Open in IMG/M
3300032054\|Ga0318570_10053178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1686	Open in IMG/M
3300032054\|Ga0318570_10593560	Not Available	505	Open in IMG/M
3300032059\|Ga0318533_11107165	Not Available	580	Open in IMG/M
3300032064\|Ga0318510_10412022	Not Available	577	Open in IMG/M
3300032076\|Ga0306924_10871597	Not Available	998	Open in IMG/M
3300032076\|Ga0306924_12208887	Not Available	561	Open in IMG/M
3300032089\|Ga0318525_10511110	Not Available	615	Open in IMG/M
3300032261\|Ga0306920_100780823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. WB9	1403	Open in IMG/M
3300032261\|Ga0306920_101094517	Not Available	1156	Open in IMG/M
3300032261\|Ga0306920_103467527	Not Available	584	Open in IMG/M
3300032261\|Ga0306920_103918518	Not Available	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.54%
Aquatic	Environmental → Aquatic	1.64%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.54%
Sediment	Environmental → Aquatic → Sediment	1.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.08%
Loam	Environmental → Terrestrial → Soil → Loam	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	81.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.64%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	59.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.64%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006939	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1025483111	3300005332	Tropical Forest Soil	MKRIIFIIAGFLLLTPLTLTGVAWATPPSGVTSSVTLGRISLGPYHQ
Ga0008090_155170162	3300005363	Tropical Rainforest Soil	MKRIVIILAGLLFLAPLTLAGVAWATPPSGAASTTLGRISLGPYHE
Ga0066903_1017438191	3300005764	Tropical Forest Soil	MKRIVIIIAGVLLLSPLPLAGVAWATPPSGVTSSTTLGRISLGA
Ga0070717_107892121	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VKRIVIIIAGFLLLTPLTLVGVAWATPPSGLTSTTLGRISLG
Ga0075029_1010440261	3300006052	Watersheds	VKRIITIAGFLLLGSLAIAGVAQATPPSNLTSTTL
Ga0079222_105191473	3300006755	Agricultural Soil	MKRIIIIIGFLLLVSSTLVGVASATPPSGATSTTLGRISLG
Ga0075426_102746351	3300006903	Populus Rhizosphere	MKRLIIIIGFLLLSSSTLVGVASATPPSGAHSTTLGRISL
Ga0081244_14826341	3300006939	Tropical Rainforest Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGLTSTTLGRI
Ga0116216_101027611	3300009698	Peatlands Soil	VKRIIIAGFLILGSLALAGVAQATPPSNLTSTTLGRISLGPFHESSHG
Ga0126382_100479371	3300010047	Tropical Forest Soil	MKRIIFIIAGFLLLTPLTLTGVAWATPPSGVTSSGTLGRISLGPYH
Ga0126370_110632611	3300010358	Tropical Forest Soil	MKRTVIIILAGFLFLTPLTLAGVAWATPPSGVTSSVTLGRISLG
Ga0126378_133758791	3300010361	Tropical Forest Soil	MKRIIIIIIGGFLLLTPLTLVGVARATTPSSVTSTTLGRISLGP
Ga0126379_108320211	3300010366	Tropical Forest Soil	MKRIVIILAGFLLLTSSMLVGVAQATPPSGVTSSVTLG
Ga0126381_1003069494	3300010376	Tropical Forest Soil	MKRIIIIIIGGFLLLTPLALAGAARATPASNLTSTTLGRI
Ga0126381_1015587662	3300010376	Tropical Forest Soil	MKRIIIIIIGGFLLLTPLTLAGVAWATPPSNLTSTTLGRISLG
Ga0126381_1026079022	3300010376	Tropical Forest Soil	MKRIVIILAGFLLLTSSMLVGVAQATPPSGVTSSVTLGRISLGA
Ga0126383_116718752	3300010398	Tropical Forest Soil	MKRIITIIIGGFLLLTPLTLAGVAWATPPSNLTSTTLGRISLG
Ga0126383_120162971	3300010398	Tropical Forest Soil	MKRIIVIIAGFLLLTPLTLVGVAWATPPSNLTSTTLGRISLGP
Ga0126383_121929001	3300010398	Tropical Forest Soil	MKRIIFIIAGFLLLTPLTLTGVAWATPPSGVTSSGTLGRISLGPYHQTS
Ga0137383_112694542	3300012199	Vadose Zone Soil	MKRIIIAAAGVLFLAPLTLAGVAWATPPAGVTSTT
Ga0126369_105848063	3300012971	Tropical Forest Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPAGAHSTTLGRI
Ga0126369_120473021	3300012971	Tropical Forest Soil	MKRIVIILAGFLLLTPLTLVGVAWATPPSGVTYTAELGRIS
Ga0182041_108308781	3300016294	Soil	MKRIIIILAGFLLLTPLTLAGVAWATPPSGVTYTAELGRISLGPYHETSPS
Ga0182041_112123132	3300016294	Soil	MKRIVIILAGLLFLAPLTAAGVAWATPPTGAVSTT
Ga0182035_105451972	3300016341	Soil	MKRIVIILAGFLFLAPLTLAGVAWATPPVGAISTTLGRISLGPYHE
Ga0182032_102624443	3300016357	Soil	MKRIVIILAGVLFLAPLTMAGVAWATPPTGATSTTLGRISLGPYHQ
Ga0182040_106483121	3300016387	Soil	MKRIVIILAGFLFLAPLTLAGVAWATPPSGVTSTTL
Ga0182039_122268621	3300016422	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGATSTTLGRISLGPYHESSDS
Ga0210402_104024371	3300021478	Soil	MKRVVIILGFLFLVSSTLAGVASATPPSGANPTPSGGSASA
Ga0209067_109655981	3300027898	Watersheds	MKRIITIAGFLLLGSLALAGVAQATPPSNLTSTTLGRIS
Ga0318534_102471622	3300031544	Soil	MKRIILIIIGGFLLLTPLTLAGAARATPPSNLTSTTLGRISLGPYHE
Ga0318541_104047052	3300031545	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGAHSTTLGRISLGPYQD
Ga0318541_108200211	3300031545	Soil	MKRIAIILAGFLFLAPLTLAGVAWATPPSGVTSSTTLGRISLGPYHE
Ga0318538_105677862	3300031546	Soil	MKRIVIILAGLLFLAPLTLAGVAWATPPSGVTHSAELGRIS
Ga0318538_107456761	3300031546	Soil	MKRIILIIIGGFLLLTPLTLAGAARATPPSNLTSTTLGRISLG
Ga0318571_100626073	3300031549	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGAHSTTLGRIS
Ga0318571_102194463	3300031549	Soil	MKRVIIIIIGFLFLSSTTLAGVASATPPSGAHPTPLGVISLGPYHE
Ga0318528_102988881	3300031561	Soil	MKRIIFILAGFLLLTPLTLGGVAWATPPSGVTSSTTLGRISLGPY
Ga0318515_100304754	3300031572	Soil	MKRIIFILAGFLLLTPLTLGGVAWATPPSGVTSSTTLGRISLGPYHETSP
Ga0318515_102171891	3300031572	Soil	MKRVIIIIGFLFLSSTTLAGVASATPPSGAHPTPLGVISLGPYHETSPGFK
Ga0310915_104995621	3300031573	Soil	MKRIILIIIGGFLLLTPLAIAGAAQATPPSNSHSTQLGRIHLDPFHERS
Ga0310915_105586812	3300031573	Soil	MKRIVIILAGVLFLAPLTLAGAAQATPPSGVTYSTTLGRISLG
Ga0318555_100329771	3300031640	Soil	MKRVIIIIIGFLFLSSTTLAGVASATPPSGAHPTPLG
Ga0318555_105450102	3300031640	Soil	MKRIVIILAGVLLLTPLTLGGVAWATPPSGATSTTLGRI
Ga0318555_107271672	3300031640	Soil	MRRIVIILAGFLFLAPLTLAGVAWAAPPPGGPSTTQG
Ga0318542_100800741	3300031668	Soil	MKRVIIIIIGFLFLSSTTLAGVASATPPSGAHPTPSG
Ga0318561_103438911	3300031679	Soil	MKRIIIIIIGGFLLLTPLALAGAAQATPPSNSHSTQLGRIHLGPFHERSHS
Ga0318561_107376671	3300031679	Soil	MKRIVIILAGLLFLAPLTAAGVAWATPPTGATSTTLGRISLGPYH
Ga0318574_102921031	3300031680	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGVTYSATLG
Ga0318560_101253031	3300031682	Soil	MKRIVIILAGFLFVAPLTLAGVAWATPPSGATSTTLGRISLGPYHETSP
Ga0318496_105348652	3300031713	Soil	MKRVIIIIGFLLLSSSTLVGVASATPPSGAHSTPLGRISLGPY
Ga0318500_100812803	3300031724	Soil	MKRTVIILAGLLFLAPLTMAGVAWATPPSGAVSTTLGRIS
Ga0318502_104182722	3300031747	Soil	MKRIVIILAGVLFLAPLTMAGVAWATPPTGAVSTT
Ga0318494_101175802	3300031751	Soil	MKRIIIIIIGGFLLLTPLALAGAAQATPPSNAHSTPLGRIH
Ga0318494_102090971	3300031751	Soil	MKRIVIILAGVLFLAPLTMAGVAWATPPTGAVSTTLGRISLG
Ga0318494_107710772	3300031751	Soil	MKRIVIILAGVLFLAPLTLTGAAQATPPSGVTSSATLGRISL
Ga0318494_109056863	3300031751	Soil	MKRVIIIIIGFLFLSSTTLAGVASATPPSGAHPTPLGVISLG
Ga0318494_109598761	3300031751	Soil	AAEGYTHMKRVIIIIIGFLFLSSTTLAGVASATPPSGAHPTPSG
Ga0318535_104221761	3300031764	Soil	MKRIIIIIIGGFLLLTSLTVAGVARATTPSGATSTTLGRISLGPYHE
Ga0318554_102166411	3300031765	Soil	MKRIVIILAGFLFLAPLTLAGVAWATPPSGVTSTTLGRISVAPFHD
Ga0318509_105292741	3300031768	Soil	MKRIVIIFAGFLFLAPLTLAGVAWATPPSGVTSTTLGRISVAP
Ga0318521_105696051	3300031770	Soil	MKRIVIILAGFLFLAPLTLAGVAWATPPVGAISTTLGRIS
Ga0318521_108001551	3300031770	Soil	MKRIVIILAGFLFVAPLTLAGVAWATPPSGATSTTLG
Ga0318546_103912922	3300031771	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGATSTTLGRIS
Ga0318498_100932161	3300031778	Soil	MKRTVIILAGLLFLAPLTMAGVAWATPPSGAVSTTL
Ga0318498_101247063	3300031778	Soil	MKRIVIILAGVLFLAPLTMAGVAWATPPTGATSTTLGRIS
Ga0318498_103363381	3300031778	Soil	MKRIILIIIGGFLLLIPLTLAGAARATPPSNSHSTPLGRI
Ga0318498_105606611	3300031778	Soil	MKRIILIIIGGFLLLTPLTLAGAARATPPSNLTSTTLGRISLGPYHETSPGFK
Ga0318566_106346891	3300031779	Soil	MKRIIIILAGFLLLTPLTLAGVAWATPPSGVTYTAELGRI
Ga0318547_101457111	3300031781	Soil	MKRTVIILAGVLFLAPLTAAGVAWATPPTGATSTTLGRISLGPYHQTSPSFK
Ga0318552_100543881	3300031782	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGVTSSTTLGRISLG
Ga0318548_100772305	3300031793	Soil	MKRVIIIIIGFLFLSSTTLAGVASATPPSGAHPTPLGVIS
Ga0318548_102315772	3300031793	Soil	MKRIIFILAGFLLLTPLTLGGVAWATPPSGVTSSTTLGRISLGPYHETS
Ga0318548_106531862	3300031793	Soil	MKRIVIILAGVLFLAPLTMAGVAWATPPTGATSTTLGRISLGPYHQTSP
Ga0318576_101348731	3300031796	Soil	MKRIILIIIGGFLLLTPLTLAGAARATPPSNSHSTPLGRISLGPY
Ga0318576_102906141	3300031796	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGATSTT
Ga0318523_103298182	3300031798	Soil	MRRIVIILAGFLFLAPLTLAGVAWATPPSGVTSTTLGRI
Ga0318565_103109151	3300031799	Soil	MKRIVIILAGFLFVAPLTLAGVAWATPPSGATSTTLGRIS
Ga0318497_104287803	3300031805	Soil	MKRVIIIIIGFLFLSSTTLAGVASATPPSGAHPTPLGVISLGPY
Ga0318567_106015101	3300031821	Soil	MKRIVIILAGVLLLTPLTLGGVAWATPPSGATSTTLGRIS
Ga0318517_100720453	3300031835	Soil	MKRIVIILAGVLLFAPLTLAGEAWATPPSGATSTTLGRISLGPYHETSP
Ga0318517_102413722	3300031835	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGAHSTTLGRI
Ga0306919_112427411	3300031879	Soil	MKRVIIIIIGFLLLSSSTLVGVASATPPSGAHSTPLG
Ga0318544_100289241	3300031880	Soil	MKRMIIVLAGVLFLAPLTLAGVAHATAPSGVTSTTLGRI
Ga0318544_101797492	3300031880	Soil	MKRIIFILAGFLLLTPLTLGGVAWATPPSGVTSSTTLGRISLGPYHE
Ga0318544_104476742	3300031880	Soil	MKRIVIILAGFLFLAPLTLAGVAWATPPSGVTSTTLGRISVA
Ga0306925_100315771	3300031890	Soil	MRRIVIILAGFLFLAPLTLAGVAWATPPSGVTSTTLG
Ga0306925_100771081	3300031890	Soil	VKRIVIIIAGFLLLSPLTVAGVAWATPPSGATSTTLG
Ga0306925_101181816	3300031890	Soil	MKRVIIIIIGFLFLSSTTLAGVASATPPSGAHPTPLGVISLGPYHETSPG
Ga0306925_121315162	3300031890	Soil	MKRIILIIIGGFLLLTPLTLAGAARATPPSNSYST
Ga0318520_101009371	3300031897	Soil	MKRIVIILAGFLFLAPLTMAGVAWATPPTGAVSTTLGRI
Ga0306923_114076002	3300031910	Soil	MKRMIIVLAGVLFLAPLTLAGVAHATAPSGVTSTTLGRISLG
Ga0306923_117949181	3300031910	Soil	MKRVIIIIGFLLLTSSTLAGVAWATTPSGVTSTTPGRI
Ga0306923_118654212	3300031910	Soil	MKRIVIIIAGVLLFAPLTLAGEAWATPPSGATSTTLGRIS
Ga0306923_121576351	3300031910	Soil	MKRIAIILAGFLFLAPLTLAGVAWATPPSGVTSSTTLG
Ga0306921_104292901	3300031912	Soil	MKRIVIILAGFLLLTSSMLVGVAQATPPSGITSSTPLGR
Ga0306921_115353901	3300031912	Soil	MRRIVIILAGFLFLAPLTLAGVAWATPPAGVTSTTLGRISVAPF
Ga0310912_108818371	3300031941	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGVTSSTTLGRISLGP
Ga0310912_114095122	3300031941	Soil	MKRIILIVIGGFLLLTPLALAGAARATPPSNSHSTQLGRIHLGP
Ga0310916_102321953	3300031942	Soil	MKRIIFILAGFLLLTPLTLGGVAWATPPSGVTSSTTLGRISLGPYHET
Ga0310913_110815951	3300031945	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGAHSTTLGRISLG
Ga0310910_107201152	3300031946	Soil	MKRIVIILAGFLFVAPLTLAGVAWATPPSGATSTTLGRISLGPYHET
Ga0310910_111447252	3300031946	Soil	MKRIVIILAGLLFLAPLTLAGVAWATPPSGVTHSAELGR
Ga0306926_116154082	3300031954	Soil	MKRIVIIIAGFLFLAPLTLAGVAWATPPSGVSSTPLGVI
Ga0307479_114827991	3300031962	Hardwood Forest Soil	MKRIIIIIGFLLLSSSALAGVASATPPSGAHPTTLGVISLGPYHETSPGFKI
Ga0318562_102568191	3300032008	Soil	MKRIILIIIAGFLLLTPLALAGPALATPPTNAHSTPLGRI
Ga0318563_104513612	3300032009	Soil	MKRIILIIIGGFLLLTPLTLAGAARATPPSNLTSTTLGRISLGPYH
Ga0318556_106240401	3300032043	Soil	MKRIILIIIGGFLLLTPLTLAGAARATPPSNLTSTTLGRISLGPY
Ga0318556_107240252	3300032043	Soil	MKRIVIILAGFLFLAPLTLAGVAWATPPVGAISTTLGRISLGTY
Ga0318558_100455832	3300032044	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGVTSSTTLGRISLGPYHESSP
Ga0318570_100531783	3300032054	Soil	MKRIVIILAGVLFLAPLTMAGVAWATPPTGAVSTTLGRI
Ga0318570_105935601	3300032054	Soil	MKRIIIIIIGGFLLLTPLALAGAAQATPPSNAHSTPLGRI
Ga0318533_111071652	3300032059	Soil	MKRIVIILAGVLFLAPLTMAGVAWATPPTGATSTTLGRISLGPYHQT
Ga0318510_104120221	3300032064	Soil	MKRIIIIIIGGFLLLTPLALAGAAQATPPSNAHSTP
Ga0306924_104754154	3300032076	Soil	MKRVIIIIGFLLLSSSTLVGVASATPPSGAHSTPLGR
Ga0306924_108715972	3300032076	Soil	MKRIILIIIGGFLLLTPLTLAGAARATPPSNLTSTTLGRISLGPYHETSP
Ga0306924_122088872	3300032076	Soil	MKRIVIIIAGFLLLTPLTLAGVAWATPPSGATSTTLGRISLGPYHE
Ga0318525_105111101	3300032089	Soil	MKRIVIIIAGVLFLAPLTLAGEAWATPPSGVTSSTTLGRISLGPY
Ga0306920_1007808231	3300032261	Soil	MKRMIIVLAGVLFLAPLTLVGVAQATTPSGVTSTT
Ga0306920_1010945171	3300032261	Soil	MKRIIIIIIGGFLLLIPLALAGAARATPPSGATST
Ga0306920_1034675272	3300032261	Soil	MKRVIIIIIGFLLLSSSTLVGVASATPPSGAHSTPLGRISLGPYHETSPGFK
Ga0306920_1039185182	3300032261	Soil	MKRIVIILAGFLFLAPLTLAGVAWATPPSGVTYTATLGRISVAPFHESSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071107

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences