Metagenome / Metatranscriptome Family F071163

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071163
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	51 residues
Representative Sequence	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKND
Number of Associated Samples	82
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.59 %
% of genes near scaffold ends (potentially truncated)	33.61 %
% of genes from short scaffolds (< 2000 bps)	77.87 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (40.984 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (13.115 % of family members)
Environment Ontology (ENVO)	Unclassified (32.787 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (37.705 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.78% β-sheet: 0.00% Coil/Unstructured: 39.22%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF11116	DUF2624	9.02
PF07460	NUMOD3	4.92
PF03330	DPBB_1	1.64
PF04255	DUF433	0.82
PF16075	DUF4815	0.82
PF01555	N6_N4_Mtase	0.82
PF02672	CP12	0.82
PF12323	HTH_OrfB_IS605	0.82
PF00565	SNase	0.82
PF11246	Phage_gp53	0.82
PF01467	CTP_transf_like	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.82
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.82
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.82
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	52.46 %
Unclassified	root	N/A	40.98 %
cellular organisms	root	All Organisms → cellular organisms	6.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.07 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	16.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.07 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	16.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.07 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	16.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.07 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16.39 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	6.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.07 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	6.56 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	4.92 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.64 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.07 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.56 %
unclassified Kyanoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae	2.46 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1.64 %
Synechococcus phage S-H1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.07 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.56 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	2.46 %
Nodensvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus	0.82 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	0.82 %
Synechococcus phage S-H1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.07 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.56 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	2.46 %
Synechococcus virus SPM2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	0.82 %
Synechococcus phage S-CRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CRM01	0.82 %
Synechococcus phage S-H1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352004\|2199786774	All Organisms → Viruses → Predicted Viral	2290	Open in IMG/M
2199352004\|2199866725	All Organisms → Viruses → Predicted Viral	4135	Open in IMG/M
3300001267\|B570J13875_100404	All Organisms → Viruses → Predicted Viral	2825	Open in IMG/M
3300001267\|B570J13875_102122	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300001274\|B570J13895_1000255	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10401	Open in IMG/M
3300002408\|B570J29032_108951140	Not Available	549	Open in IMG/M
3300002408\|B570J29032_109567874	Not Available	882	Open in IMG/M
3300002835\|B570J40625_100016228	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12980	Open in IMG/M
3300002835\|B570J40625_100077948	All Organisms → Viruses → Predicted Viral	4318	Open in IMG/M
3300002835\|B570J40625_100368068	All Organisms → Viruses → Predicted Viral	1415	Open in IMG/M
3300005662\|Ga0078894_10380757	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1	1276	Open in IMG/M
3300005805\|Ga0079957_1000291	Not Available	43428	Open in IMG/M
3300005805\|Ga0079957_1095357	All Organisms → Viruses → Predicted Viral	1638	Open in IMG/M
3300006641\|Ga0075471_10027534	All Organisms → Viruses → Predicted Viral	3304	Open in IMG/M
3300006641\|Ga0075471_10618639	Not Available	530	Open in IMG/M
3300006802\|Ga0070749_10376853	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	785	Open in IMG/M
3300006875\|Ga0075473_10280866	Not Available	673	Open in IMG/M
3300007541\|Ga0099848_1054433	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1604	Open in IMG/M
3300007541\|Ga0099848_1179999	Not Available	768	Open in IMG/M
3300007542\|Ga0099846_1275053	Not Available	580	Open in IMG/M
3300007546\|Ga0102874_1160932	Not Available	696	Open in IMG/M
3300007560\|Ga0102913_1078589	All Organisms → Viruses → Predicted Viral	1073	Open in IMG/M
3300007624\|Ga0102878_1164961	Not Available	641	Open in IMG/M
3300007634\|Ga0102901_1063360	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300007960\|Ga0099850_1083866	All Organisms → Viruses → Predicted Viral	1328	Open in IMG/M
3300008055\|Ga0108970_11750757	Not Available	687	Open in IMG/M
3300008107\|Ga0114340_1074311	All Organisms → Viruses → Predicted Viral	1421	Open in IMG/M
3300008107\|Ga0114340_1152835	Not Available	847	Open in IMG/M
3300008107\|Ga0114340_1159235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	820	Open in IMG/M
3300008108\|Ga0114341_10148130	All Organisms → Viruses → Predicted Viral	1937	Open in IMG/M
3300008113\|Ga0114346_1087744	All Organisms → Viruses → Predicted Viral	1453	Open in IMG/M
3300008113\|Ga0114346_1162848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	937	Open in IMG/M
3300008113\|Ga0114346_1248835	Not Available	663	Open in IMG/M
3300008120\|Ga0114355_1032697	All Organisms → Viruses → Predicted Viral	2568	Open in IMG/M
3300008261\|Ga0114336_1095657	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
3300008261\|Ga0114336_1318144	Not Available	576	Open in IMG/M
3300008261\|Ga0114336_1363312	Not Available	514	Open in IMG/M
3300008266\|Ga0114363_1063252	All Organisms → Viruses → Predicted Viral	2406	Open in IMG/M
3300008267\|Ga0114364_1100694	Not Available	900	Open in IMG/M
3300009009\|Ga0105105_10147830	All Organisms → Viruses → Predicted Viral	1181	Open in IMG/M
3300009009\|Ga0105105_10594663	Not Available	645	Open in IMG/M
3300009027\|Ga0102957_1120785	Not Available	921	Open in IMG/M
3300009075\|Ga0105090_10296178	Not Available	992	Open in IMG/M
3300009165\|Ga0105102_10389697	Not Available	738	Open in IMG/M
3300009470\|Ga0126447_1146333	Not Available	572	Open in IMG/M
3300010354\|Ga0129333_10235729	All Organisms → Viruses → Predicted Viral	1654	Open in IMG/M
3300010354\|Ga0129333_10396466	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	1222	Open in IMG/M
3300010354\|Ga0129333_10657369	Not Available	905	Open in IMG/M
3300010354\|Ga0129333_11135377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	651	Open in IMG/M
3300010370\|Ga0129336_10213426	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	1094	Open in IMG/M
3300010370\|Ga0129336_10733226	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	522	Open in IMG/M
3300010370\|Ga0129336_10741256	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	519	Open in IMG/M
3300010389\|Ga0136549_10105569	All Organisms → Viruses → Predicted Viral	1320	Open in IMG/M
3300020498\|Ga0208050_1012268	Not Available	943	Open in IMG/M
3300020514\|Ga0208202_1033048	Not Available	576	Open in IMG/M
3300020519\|Ga0208223_1010695	All Organisms → Viruses → Predicted Viral	1453	Open in IMG/M
3300020519\|Ga0208223_1024184	Not Available	816	Open in IMG/M
3300020526\|Ga0208085_1009346	All Organisms → Viruses → Predicted Viral	1583	Open in IMG/M
3300020570\|Ga0208465_1000023	Not Available	61094	Open in IMG/M
3300020570\|Ga0208465_1008211	All Organisms → Viruses → Predicted Viral	1513	Open in IMG/M
3300020574\|Ga0208221_1070311	Not Available	632	Open in IMG/M
3300021141\|Ga0214163_1028142	All Organisms → Viruses → Predicted Viral	1622	Open in IMG/M
3300021323\|Ga0210295_1005864	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	5149	Open in IMG/M
3300021962\|Ga0222713_10043389	All Organisms → Viruses → Predicted Viral	3497	Open in IMG/M
3300021964\|Ga0222719_10079856	All Organisms → Viruses → Predicted Viral	2425	Open in IMG/M
3300022198\|Ga0196905_1019770	All Organisms → Viruses → Predicted Viral	2116	Open in IMG/M
3300022200\|Ga0196901_1210329	Not Available	620	Open in IMG/M
3300024239\|Ga0247724_1050155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	619	Open in IMG/M
3300024289\|Ga0255147_1000026	Not Available	99109	Open in IMG/M
3300024289\|Ga0255147_1000801	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	8179	Open in IMG/M
3300024289\|Ga0255147_1024083	All Organisms → Viruses → Predicted Viral	1262	Open in IMG/M
3300024348\|Ga0244776_10036609	All Organisms → Viruses → Predicted Viral	3917	Open in IMG/M
3300024351\|Ga0255141_1020480	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300024357\|Ga0255165_1027321	All Organisms → Viruses → Predicted Viral	1037	Open in IMG/M
3300024503\|Ga0255152_1000025	Not Available	117387	Open in IMG/M
3300025646\|Ga0208161_1044936	All Organisms → Viruses → Predicted Viral	1453	Open in IMG/M
3300025732\|Ga0208784_1223558	Not Available	545	Open in IMG/M
3300025889\|Ga0208644_1286363	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	662	Open in IMG/M
3300026455\|Ga0255155_1054049	Not Available	675	Open in IMG/M
3300027247\|Ga0208679_1048247	Not Available	805	Open in IMG/M
3300027693\|Ga0209704_1017198	All Organisms → Viruses → Predicted Viral	1804	Open in IMG/M
3300027693\|Ga0209704_1022182	All Organisms → Viruses → Predicted Viral	1626	Open in IMG/M
3300027762\|Ga0209288_10213233	Not Available	633	Open in IMG/M
3300027793\|Ga0209972_10263711	Not Available	772	Open in IMG/M
3300027793\|Ga0209972_10323294	Not Available	674	Open in IMG/M
3300027975\|Ga0209391_10407407	Not Available	521	Open in IMG/M
3300027975\|Ga0209391_10418245	Not Available	512	Open in IMG/M
3300031758\|Ga0315907_10150959	All Organisms → Viruses → Predicted Viral	1968	Open in IMG/M
3300031758\|Ga0315907_10343941	All Organisms → Viruses → Predicted Viral	1215	Open in IMG/M
3300031787\|Ga0315900_10571930	Not Available	835	Open in IMG/M
3300031787\|Ga0315900_10882018	Not Available	604	Open in IMG/M
3300031857\|Ga0315909_10147366	All Organisms → Viruses → Predicted Viral	1945	Open in IMG/M
3300031951\|Ga0315904_10010652	Not Available	11853	Open in IMG/M
3300031951\|Ga0315904_10021148	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7806	Open in IMG/M
3300031963\|Ga0315901_10165129	All Organisms → Viruses → Predicted Viral	1956	Open in IMG/M
3300031963\|Ga0315901_10501776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	945	Open in IMG/M
3300032116\|Ga0315903_10431228	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1063	Open in IMG/M
3300032116\|Ga0315903_10513089	Not Available	943	Open in IMG/M
3300033418\|Ga0316625_100326102	All Organisms → Viruses → Predicted Viral	1111	Open in IMG/M
3300033482\|Ga0316627_100011358	All Organisms → Viruses → Predicted Viral	4182	Open in IMG/M
3300033488\|Ga0316621_11500309	Not Available	517	Open in IMG/M
3300033521\|Ga0316616_101797755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	805	Open in IMG/M
3300033557\|Ga0316617_101961842	Not Available	601	Open in IMG/M
3300033993\|Ga0334994_0464767	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM2	596	Open in IMG/M
3300033994\|Ga0334996_0332248	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	741	Open in IMG/M
3300034061\|Ga0334987_0000028	Not Available	119321	Open in IMG/M
3300034061\|Ga0334987_0079897	All Organisms → Viruses → Predicted Viral	2583	Open in IMG/M
3300034061\|Ga0334987_0640219	Not Available	620	Open in IMG/M
3300034063\|Ga0335000_0001692	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	18796	Open in IMG/M
3300034063\|Ga0335000_0403169	Not Available	813	Open in IMG/M
3300034066\|Ga0335019_0095356	All Organisms → Viruses → Predicted Viral	1997	Open in IMG/M
3300034066\|Ga0335019_0378262	Not Available	870	Open in IMG/M
3300034066\|Ga0335019_0592291	Not Available	650	Open in IMG/M
3300034066\|Ga0335019_0824349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	521	Open in IMG/M
3300034072\|Ga0310127_179732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	805	Open in IMG/M
3300034072\|Ga0310127_256910	Not Available	617	Open in IMG/M
3300034073\|Ga0310130_0023577	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1943	Open in IMG/M
3300034103\|Ga0335030_0019236	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5228	Open in IMG/M
3300034104\|Ga0335031_0142668	All Organisms → Viruses → Predicted Viral	1661	Open in IMG/M
3300034118\|Ga0335053_0356116	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CRM01	901	Open in IMG/M
3300034118\|Ga0335053_0690066	Not Available	576	Open in IMG/M
3300034272\|Ga0335049_0047476	All Organisms → Viruses → Predicted Viral	3190	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.80%
Terrestrial	Environmental → Terrestrial	7.38%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	65.57%
Marine	Environmental → Aquatic → Marine	23.77%
Soil	Environmental → Terrestrial → Soil	4.10%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.28%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.82%
Sediment	Environmental → Aquatic → Sediment	0.82%
Unclassified	Environmental → Aquatic → Unclassified	0.82%
Leaf	Host-Associated → Plants → Leaf	0.82%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	25.41%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.03%
Coastal	Environmental → Aquatic → Marine → Coastal	16.39%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	9.02%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.38%
River	Environmental → Aquatic → Freshwater → River	5.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.10%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.64%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	25.41%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.39%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	13.11%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	9.02%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.38%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	5.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	5.74%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	4.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.10%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	13.11%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.11%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	10.66%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	10.66%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	9.02%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.38%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	5.74%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.74%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.10%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.46%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.46%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	2.46%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.64%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.64%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.82%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.82%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.82%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.82%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300001267	Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion	Environmental	Open in IMG/M
3300001274	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009470	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, surface; DNA IDBA-UD	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020514	Freshwater microbial communities from Lake Mendota, WI - 27AUG2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020526	Freshwater microbial communities from Lake Mendota, WI - 21JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020570	Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020574	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021141	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300021323	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R9.63AS (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300024239	Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-E	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024351	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0h	Environmental	Open in IMG/M
3300024357	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8d	Environmental	Open in IMG/M
3300024503	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8h	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026455	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8h	Environmental	Open in IMG/M
3300027247	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2199945549	2199352004	Freshwater	MTKTQSALERVIIELDNWCDNWTPTSYNDPRISLRQIADRARNVLEQEKNDYDFK
2200052503	2199352004	Freshwater	MTKIQSALERVILELDSWCDNWMPNSYNDPRISLRQIADRARDVLEQEKNDM
B570J13875_1004043	3300001267	Freshwater	MNKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDL*
B570J13875_1021222	3300001267	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARGVLEEEK*
B570J13895_100025521	3300001274	Freshwater	MTKTQSALERVIIELDNWCDNWTPTSYNDPRISLRQIADRARNVLEQEKNDYDFK*
B570J29032_1089511402	3300002408	Freshwater	MTKTQSALERVIIELDSWCNNWTPNSYNDPRISLRQIADRARGVLEQEKND*
B570J29032_1095678744	3300002408	Freshwater	MTKTQSALERVILDLDRWCDSWMPNSYNDPRISLRQIADRARGVLEQEND*
B570J40625_1000162285	3300002835	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLDPRKKK*
B570J40625_1000779486	3300002835	Freshwater	MTKTQLALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKNDLRSSNLG*
B570J40625_1003680683	3300002835	Freshwater	MTKIQSALERVILELDSWCDNWMPNSYNDPRISLRQIADRARDVLEQEKNDM*
Ga0078894_103807572	3300005662	Freshwater Lake	MTKIQSALQRVISELDFWCDTWHPDSYTDPRISLGRIADRGRAALEETD*
Ga0079957_100029152	3300005805	Lake	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEQEKND*
Ga0079957_10953573	3300005805	Lake	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEEKKTEE*
Ga0075471_1002753413	3300006641	Aqueous	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFR*
Ga0075471_106186391	3300006641	Aqueous	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKND*
Ga0070749_103768532	3300006802	Aqueous	MTKTQSALERVILDLDRWCDSWTPNSYNDPRISLRQIADRARNVLEQEKNDYDFR*
Ga0075473_102808662	3300006875	Aqueous	MTKTQSALERVIIELDNWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFK*
Ga0099848_10544334	3300007541	Aqueous	MTKTQSALERVIIELDSWCDNWMPNSYNDPRISLRQIADRARDALEQEKND*
Ga0099848_11799991	3300007541	Aqueous	MTKTQSALERVIIELDSWCDNWMPNSYNDPRISLRQIADRARDVLEQEKNDYDFK*
Ga0099846_12750532	3300007542	Aqueous	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKK*
Ga0102874_11609324	3300007546	Estuarine	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEK*
Ga0102913_10785896	3300007560	Estuarine	MTKTQSALERVIIELDSWCDNWTSTSYNDPRISLRQIADRARNVLE
Ga0102878_11649611	3300007624	Estuarine	MTKTQSALERVIIELDSWCDNWTSTSYNDPRISLRQIADRARNVL
Ga0102901_10633605	3300007634	Estuarine	MTKTQSALERVIIELDSWCDNWTSTSYNDPRISLRQIADRARNVLEEE
Ga0099850_10838662	3300007960	Aqueous	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEEK*
Ga0108970_117507572	3300008055	Estuary	MTKTQKALERVIIELDSWCDNWTPTSYNDPRISLRQIANRARDVLEQEKNDYDFK*
Ga0114340_10743113	3300008107	Freshwater, Plankton	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEQEKNDL*
Ga0114340_11528354	3300008107	Freshwater, Plankton	MTKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEND*
Ga0114340_11592353	3300008107	Freshwater, Plankton	MNKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFR*
Ga0114341_101481303	3300008108	Freshwater, Plankton	MTKIQSALERVIIELDSWCDNWTPTSYNDPRISLRQRSS*
Ga0114346_10877443	3300008113	Freshwater, Plankton	MTKIQSALERVILELDSWCDNWMPNSYNDPRISLRQIADRARNVLEQEENDYDFR*
Ga0114346_11628484	3300008113	Freshwater, Plankton	MNKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRAR
Ga0114346_12488351	3300008113	Freshwater, Plankton	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARD
Ga0114355_10326972	3300008120	Freshwater, Plankton	MNKTQSALERVIIELDSWCDNWMPNSYNDPRISLRQIADRARDVLEQEKNDYDFK*
Ga0114336_10956576	3300008261	Freshwater, Plankton	MTKIQSALERVILDLDRWCDSWTPTSYNDPRISLRQIADRARNVLEQEND*
Ga0114336_13181442	3300008261	Freshwater, Plankton	ERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFR*
Ga0114336_13633122	3300008261	Freshwater, Plankton	MTKTQSALERVIIELDSWCDNWAPTSYNDPRISLRQIADRARNVLEQEKNDYQTHQS*
Ga0114363_10632526	3300008266	Freshwater, Plankton	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFK*
Ga0114364_11006941	3300008267	Freshwater, Plankton	MWSWIGKMTKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFK*
Ga0105105_101478302	3300009009	Freshwater Sediment	MTKIQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLDPRKK*
Ga0105105_105946632	3300009009	Freshwater Sediment	MTKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEEK*
Ga0102957_11207854	3300009027	Pond Water	MTKTQSALERVIIELDSWCDNWTPASYNDPRISLRQIADRARNVLE
Ga0105090_102961781	3300009075	Freshwater Sediment	MTKTQKALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKND
Ga0105102_103896971	3300009165	Freshwater Sediment	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKN
Ga0126447_11463332	3300009470	Meromictic Pond	MTKTQSALERVIIELDSWCDNRTPTSYNDPRISLRQIADRARNVLEQEKND*
Ga0129333_102357294	3300010354	Freshwater To Marine Saline Gradient	MTKTQKALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKND*
Ga0129333_103964662	3300010354	Freshwater To Marine Saline Gradient	MTKTQKALERVIIELDSWCDNWMPNSYNDPRISLRQIADRARNVLEEEK*
Ga0129333_106573693	3300010354	Freshwater To Marine Saline Gradient	MTKTQSALERVIIELDNWCDNWAPTSYNDPRISLRQIADRARNVLEQEND*
Ga0129333_111353772	3300010354	Freshwater To Marine Saline Gradient	IICLIIWGGAFMWSWIGKMTKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARGVLEQEKNDL*
Ga0129336_102134261	3300010370	Freshwater To Marine Saline Gradient	MTKTQKALERVIIELDSWCDNWMPNSYNDPRISLRQIADRA
Ga0129336_107332261	3300010370	Freshwater To Marine Saline Gradient	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQI
Ga0129336_107412561	3300010370	Freshwater To Marine Saline Gradient	RVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEEKND*
Ga0136549_101055691	3300010389	Marine Methane Seep Sediment	ALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLGEEKND*
Ga0208050_10122681	3300020498	Freshwater	MTKTQSALERVIIELDSWCDNWTPNSYNDPRISLRQIADRARDVLEEEKK
Ga0208202_10330482	3300020514	Freshwater	MNKTQSALERVIIELDNWCDNWTPTSYNDPRISLRQIADRARNVLVEEKNDLRSSNLG
Ga0208223_10106952	3300020519	Freshwater	MTKTQSALERVIIELDSWCNNWTPNSYNDPRISLRQIADRARGVLEQEKND
Ga0208223_10241842	3300020519	Freshwater	MTKTQSALERVILDLDRWCDSWMPNSYNDPRISLRQIADRARGVLEQEND
Ga0208085_10093461	3300020526	Freshwater	RVIIELDNWCDNWTPTSYNDPRISLRQIADRARNVLEQEKNDYDFK
Ga0208465_1000023104	3300020570	Freshwater	MNKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDL
Ga0208465_10082114	3300020570	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARGVLEEEK
Ga0208221_10703112	3300020574	Freshwater	MTKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEEKND
Ga0214163_10281428	3300021141	Freshwater	MWSWSGKMTKTQSALERVIIELDNWCDNWTPTSYNDPRISLRQIADRARNVLEQEKNDYDFK
Ga0210295_100586414	3300021323	Estuarine	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEQEKND
Ga0222713_100433892	3300021962	Estuarine Water	MTKTQSALERVIIELDSWCDNWTPASYNDPRISLRQIADRARNVLKHEDD
Ga0222719_100798568	3300021964	Estuarine Water	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKETDALRN
Ga0196905_10197705	3300022198	Aqueous	MTKTQSALERVIIELDSWCNNWTPTSYNDPRISLRQIADRARNVLEEEKND
Ga0196901_12103293	3300022200	Aqueous	MTKTQSALERVIIELDSWCNNWTPTSYNDPRISLRQIADRACNVLEEEKND
Ga0247724_10501551	3300024239	Deep Subsurface Sediment	MTKTQKALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDLQVF
Ga0255147_10000267	3300024289	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFR
Ga0255147_100080123	3300024289	Freshwater	MWSWSGKMTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEQEKNDYDFR
Ga0255147_10240835	3300024289	Freshwater	MTKTQKALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEETNNYLLII
Ga0244776_100366092	3300024348	Estuarine	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIANRARDVLEQEKNDYDFK
Ga0255141_10204804	3300024351	Freshwater	MTKTQKALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEETNN
Ga0255165_10273215	3300024357	Freshwater	MWSWSGKMTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVL
Ga0255152_10000256	3300024503	Freshwater	VEHLCGVGLVMTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFR
Ga0208161_10449363	3300025646	Aqueous	MTKTQSALERVIIELDSWCDNWMPNSYNDPRISLRQIADRARDALEQEKND
Ga0208784_12235581	3300025732	Aqueous	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKND
Ga0208644_12863634	3300025889	Aqueous	MTKTQSALERVILDLDRWCDSWTPNSYNDPRISLRQIADRARNVL
Ga0255155_10540494	3300026455	Freshwater	MWSWSGKMTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIVD
Ga0208679_10482474	3300027247	Estuarine	MTKTQSALERVIIELDSWCDNWTSTSYNDPRISLRQIADRARNVLEEEKE
Ga0209704_10171988	3300027693	Freshwater Sediment	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRAR
Ga0209704_10221823	3300027693	Freshwater Sediment	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKNDLRSSNLG
Ga0209288_102132331	3300027762	Freshwater Sediment	RVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKNDLRSSNLG
Ga0209972_102637111	3300027793	Freshwater Lake	TKTQSALERIIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFK
Ga0209972_103232943	3300027793	Freshwater Lake	VEHLCGVGLVIMNKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEN
Ga0209391_104074072	3300027975	Freshwater Sediment	LERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEEK
Ga0209391_104182451	3300027975	Freshwater Sediment	MNKTQKALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEEKKTEE
Ga0315907_101509591	3300031758	Freshwater	MNKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLDPRKK
Ga0315907_103439412	3300031758	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEND
Ga0315900_105719302	3300031787	Freshwater	MTKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEND
Ga0315900_108820182	3300031787	Freshwater	MNKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFK
Ga0315909_101473664	3300031857	Freshwater	MTKIQSALERVILELDSWCDNWMPNSYNDPRISLRQIADRARDVLEQEKNDYDFK
Ga0315904_100106521	3300031951	Freshwater	MNKTQSALERVIIELDSWCDNWMPNSYNDPRISLRQIADRARDVLEQEKNDYDFK
Ga0315904_1002114831	3300031951	Freshwater	MTKTQSALERVIIELDSWCDNWMPNSYNDPRISLRQIADRARDVLE
Ga0315901_101651292	3300031963	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEQEKNDL
Ga0315901_105017765	3300031963	Freshwater	MTKTQSALERVIIELDNWCDNWTPTSYNDPRISLRQIADHARDALD
Ga0315903_104312282	3300032116	Freshwater	MTKTQSALERVIIELDSWCDNWMPNSYNDPRISLRQIADRARDVLEQEKNDYDFK
Ga0315903_105130895	3300032116	Freshwater	MTKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIADRARDV
Ga0316625_1003261022	3300033418	Soil	MIELQSALERVILDLDRWCDSWTPNSYNDPRISLRQIADRARDVLEQEKNDYDFR
Ga0316627_10001135812	3300033482	Soil	MIELQSALERVILDLDRWCDSWTPNSYNDPRISLRQIADRARNVLEQEKND
Ga0316621_115003091	3300033488	Soil	QSALERVILDLDRWCDSWTPNSYNDPRISLRQIADRARDVLEQEKNDYDFR
Ga0316616_1017977552	3300033521	Soil	MTKTQSALERVILDLDRWCDSWTPTSYNDPRISLRQIADRARDVLEQEKNDYDFR
Ga0316617_1019618422	3300033557	Soil	MTKTQSALERVIIELDSWCDNWTPASYNDPRISLRQIADRARDVLEQEKNDYDFR
Ga0334994_0464767_251_427	3300033993	Freshwater	MTKTQLALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKNDLRSSNLG
Ga0334996_0332248_402_557	3300033994	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKND
Ga0334987_0000028_2544_2699	3300034061	Freshwater	MTKTQSALERVIIELDSWCDNWTPNSYNDPRISLRQIADRARDVLEQEKND
Ga0334987_0079897_2467_2583	3300034061	Freshwater	MTKTQLALERVIIELDSWCDNWTPTSYNDPRISLRQIAD
Ga0334987_0640219_1_117	3300034061	Freshwater	MTKTQKALERVIIELDSWCDNWTPTSYNDPRISLRQIAD
Ga0335000_0001692_3470_3646	3300034063	Freshwater	MTKTQKALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLVEEKNDLRSSNLG
Ga0335000_0403169_2_136	3300034063	Freshwater	MTKTQSALERVIIELDSWCDNWAPTSYNDPRISLRQIADRARDVL
Ga0335019_0095356_29_187	3300034066	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLDPRKKND
Ga0335019_0378262_559_714	3300034066	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEEKND
Ga0335019_0592291_513_650	3300034066	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLD
Ga0335019_0824349_81_236	3300034066	Freshwater	MTKTQSALERVIIELDSWCDNWTPNSYNDPRISLRQIADRARGVLEQEKND
Ga0310127_179732_384_551	3300034072	Fracking Water	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEQEKNDLQVF
Ga0310127_256910_3_137	3300034072	Fracking Water	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVL
Ga0310130_0023577_1707_1862	3300034073	Fracking Water	MSKTKKALERVILELDAWCDTWTPHSYIDPRISLRLIADRARTVLNEDSND
Ga0335030_0019236_1689_1865	3300034103	Freshwater	MNKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARNVLEEEKNDLRSSNLG
Ga0335031_0142668_1548_1661	3300034104	Freshwater	MTKTQSALERVILELDSWCDNWTPTSYNDPRISLRQIA
Ga0335053_0356116_132_293	3300034118	Freshwater	MTKTQLALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDVLEEKKNEQS
Ga0335053_0690066_443_574	3300034118	Freshwater	MTKTQSALERVIIELDSWCDNWTPTSYNDPRISLRQIADRARDV
Ga0335049_0047476_1572_1727	3300034272	Freshwater	MTKTQSALERVIIELDSWCDNWTPNSYNDPRISLRQIADRARGVLEQKKND

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071163

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences