Basic Information | |
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Family ID | F071302 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 122 |
Average Sequence Length | 58 residues |
Representative Sequence | MEILLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKERADGEIEKVNDEQSK |
Number of Associated Samples | 108 |
Number of Associated Scaffolds | 122 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 45.76 % |
% of genes near scaffold ends (potentially truncated) | 29.51 % |
% of genes from short scaffolds (< 2000 bps) | 61.48 % |
Associated GOLD sequencing projects | 99 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.45 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (69.672 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (23.770 % of family members) |
Environment Ontology (ENVO) | Unclassified (48.361 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (87.705 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 43.18% β-sheet: 6.82% Coil/Unstructured: 50.00% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.45 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 122 Family Scaffolds |
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PF02675 | AdoMet_dc | 13.93 |
PF02622 | DUF179 | 8.20 |
PF00118 | Cpn60_TCP1 | 4.10 |
PF00012 | HSP70 | 3.28 |
PF00155 | Aminotran_1_2 | 2.46 |
PF13759 | 2OG-FeII_Oxy_5 | 1.64 |
PF00398 | RrnaAD | 0.82 |
PF04304 | DUF454 | 0.82 |
PF04773 | FecR | 0.82 |
COG ID | Name | Functional Category | % Frequency in 122 Family Scaffolds |
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COG1586 | S-adenosylmethionine decarboxylase | Amino acid transport and metabolism [E] | 13.93 |
COG1678 | Putative transcriptional regulator, AlgH/UPF0301 family | Transcription [K] | 8.20 |
COG0459 | Chaperonin GroEL (HSP60 family) | Posttranslational modification, protein turnover, chaperones [O] | 4.10 |
COG0443 | Molecular chaperone DnaK (HSP70) | Posttranslational modification, protein turnover, chaperones [O] | 3.28 |
COG0030 | 16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) | Translation, ribosomal structure and biogenesis [J] | 0.82 |
COG2832 | Uncharacterized membrane protein YbaN, DUF454 family | Function unknown [S] | 0.82 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 69.67 % |
All Organisms | root | All Organisms | 30.33 % |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 23.77% |
Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 20.49% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 10.66% |
Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 5.74% |
Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 4.92% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 4.10% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 4.10% |
Surface Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater | 3.28% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 2.46% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 2.46% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 2.46% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 2.46% |
Meromictic Pond | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond | 1.64% |
Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.82% |
Marine | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine | 0.82% |
Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater | 0.82% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.82% |
Estuary Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water | 0.82% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.82% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.82% |
Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 0.82% |
Estuarine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine | 0.82% |
Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 0.82% |
Saline Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water | 0.82% |
Saline Lake | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake | 0.82% |
Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment | 0.82% |
Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment | 0.82% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001353 | Pelagic Microbial community sample from North Sea - COGITO 998_met_09 | Environmental | Open in IMG/M |
3300001355 | Pelagic Microbial community sample from North Sea - COGITO 998_met_08 | Environmental | Open in IMG/M |
3300003477 | Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3 | Environmental | Open in IMG/M |
3300003620 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA | Environmental | Open in IMG/M |
3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
3300005432 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78 | Environmental | Open in IMG/M |
3300005512 | Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water | Environmental | Open in IMG/M |
3300005611 | Saline surface water microbial communities from Etoliko Lagoon, Greece | Environmental | Open in IMG/M |
3300005735 | Seawater microbial communities from Vineyard Sound, MA, USA - control T0 | Environmental | Open in IMG/M |
3300005933 | Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE | Environmental | Open in IMG/M |
3300006334 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m | Environmental | Open in IMG/M |
3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
3300006867 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA | Environmental | Open in IMG/M |
3300006868 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA | Environmental | Open in IMG/M |
3300006925 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG | Environmental | Open in IMG/M |
3300007973 | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um | Environmental | Open in IMG/M |
3300009000 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG | Environmental | Open in IMG/M |
3300009001 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG | Environmental | Open in IMG/M |
3300009447 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 | Environmental | Open in IMG/M |
3300009466 | Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UD | Environmental | Open in IMG/M |
3300009470 | Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, surface; DNA IDBA-UD | Environmental | Open in IMG/M |
3300009496 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 | Environmental | Open in IMG/M |
3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
3300009703 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG | Environmental | Open in IMG/M |
3300009790 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome | Environmental | Open in IMG/M |
3300010296 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA | Environmental | Open in IMG/M |
3300010299 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA | Environmental | Open in IMG/M |
3300010318 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA | Environmental | Open in IMG/M |
3300012919 | Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG | Environmental | Open in IMG/M |
3300012920 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG | Environmental | Open in IMG/M |
3300012928 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG | Environmental | Open in IMG/M |
3300012936 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG | Environmental | Open in IMG/M |
3300012954 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG | Environmental | Open in IMG/M |
3300013188 | Marine hypoxic microbial communities from the Gulf of Mexico, USA - 6m_Station1_GOM_Metagenome | Environmental | Open in IMG/M |
3300016797 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300017708 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG | Environmental | Open in IMG/M |
3300017714 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15 | Environmental | Open in IMG/M |
3300017721 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG | Environmental | Open in IMG/M |
3300017756 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 | Environmental | Open in IMG/M |
3300017824 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017949 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017950 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017952 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017956 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017958 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017967 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018036 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018048 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018416 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018424 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018426 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300019261 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413BS (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019459 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300020175 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2 | Environmental | Open in IMG/M |
3300020247 | Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962) | Environmental | Open in IMG/M |
3300020248 | Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556118-ERR599141) | Environmental | Open in IMG/M |
3300020264 | Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158) | Environmental | Open in IMG/M |
3300020266 | Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951) | Environmental | Open in IMG/M |
3300020267 | Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556026-ERR599108) | Environmental | Open in IMG/M |
3300020269 | Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041) | Environmental | Open in IMG/M |
3300020281 | Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116) | Environmental | Open in IMG/M |
3300020294 | Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153) | Environmental | Open in IMG/M |
3300020296 | Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX556002-ERR599140) | Environmental | Open in IMG/M |
3300020299 | Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX555923-ERR599016) | Environmental | Open in IMG/M |
3300020305 | Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX556024-ERR599003) | Environmental | Open in IMG/M |
3300020371 | Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555978-ERR598991) | Environmental | Open in IMG/M |
3300020394 | Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026) | Environmental | Open in IMG/M |
3300020397 | Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075) | Environmental | Open in IMG/M |
3300020402 | Marine microbial communities from Tara Oceans - TARA_B000000609 (ERX555971-ERR599057) | Environmental | Open in IMG/M |
3300020403 | Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145) | Environmental | Open in IMG/M |
3300020404 | Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978) | Environmental | Open in IMG/M |
3300020408 | Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118) | Environmental | Open in IMG/M |
3300020416 | Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039) | Environmental | Open in IMG/M |
3300020438 | Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942) | Environmental | Open in IMG/M |
3300020445 | Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087) | Environmental | Open in IMG/M |
3300020448 | Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954) | Environmental | Open in IMG/M |
3300020450 | Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077) | Environmental | Open in IMG/M |
3300020456 | Marine microbial communities from Tara Oceans - TARA_B100001741 (ERX555984-ERR599123) | Environmental | Open in IMG/M |
3300020471 | Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002) | Environmental | Open in IMG/M |
3300021335 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540 | Environmental | Open in IMG/M |
3300021356 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245 | Environmental | Open in IMG/M |
3300021368 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550 | Environmental | Open in IMG/M |
3300021373 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282 | Environmental | Open in IMG/M |
3300021379 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247 | Environmental | Open in IMG/M |
3300021957 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D | Environmental | Open in IMG/M |
3300021960 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D | Environmental | Open in IMG/M |
3300021961 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D | Environmental | Open in IMG/M |
3300021964 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D | Environmental | Open in IMG/M |
3300022074 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2) | Environmental | Open in IMG/M |
3300022198 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3) | Environmental | Open in IMG/M |
3300022200 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3) | Environmental | Open in IMG/M |
3300022825 | Saline water microbial communities from Ace Lake, Antarctica - #730 | Environmental | Open in IMG/M |
3300022923 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG | Environmental | Open in IMG/M |
3300022925 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG | Environmental | Open in IMG/M |
3300022929 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG | Environmental | Open in IMG/M |
3300022935 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG | Environmental | Open in IMG/M |
3300023170 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG | Environmental | Open in IMG/M |
3300023180 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG | Environmental | Open in IMG/M |
3300024264 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG | Environmental | Open in IMG/M |
3300024301 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly) | Environmental | Open in IMG/M |
3300025751 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025830 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes) | Environmental | Open in IMG/M |
3300026187 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
3300026258 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78 (SPAdes) | Environmental | Open in IMG/M |
3300026266 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257 (SPAdes) | Environmental | Open in IMG/M |
3300027906 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes) | Environmental | Open in IMG/M |
3300031785 | Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI20159J14440_100918481 | 3300001353 | Pelagic Marine | MSEILIFGMGIGAIIYISFKLGKERGTMLASARAVDTMIAMGYLKENPN |
JGI20158J14315_100350131 | 3300001355 | Pelagic Marine | MSEILIFGMGIGAIIYISFKLGKERGTMLASARTVDIMIAMGYLKENPNGEIEKVENDK* |
nap3_100273324 | 3300003477 | Estuarine | MNEILIFGLGIGAIIYISYKLGKEKGTMLASERAVDIMIAMGYLKETRDGEIEKVENDK* |
JGI26273J51734_100044001 | 3300003620 | Marine | MNEILIFGLSIGAIIYISFKLGKERGTMLASARAVDMMISMGYLKETDKGEIEKVNDEQSQ* |
Ga0055584_1010513844 | 3300004097 | Pelagic Marine | VMNEILIFGLGIGAIIYISFKLGKERGTMLASARAVDMMISMGYLKETDKGEIEKVNDEQSQ* |
Ga0066845_103637091 | 3300005432 | Marine | MNDILMFGLGIGAIIYISFKLGKERGTMLASERAIDMMIAMGYLKEKANGEIKKVDNDK* |
Ga0074648_100084222 | 3300005512 | Saline Water And Sediment | MIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIETVDNEQSK* |
Ga0074647_10096621 | 3300005611 | Saline Water And Sediment | VDNLYFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIETVDNEQSK |
Ga0076923_11182017 | 3300005735 | Marine | MNEILIFGLGIGAIIYISFKLGKERGTMLASARAVDMMISMGYLKETDKGEIEKVNDEQSQ* |
Ga0075118_1000234714 | 3300005933 | Saline Lake | MNEILIFGLSIGAIIYISFKLGKEQGTMLASARAVDMMISMGYLKETDKGEIEKVENDK* |
Ga0099675_10879522 | 3300006334 | Marine | MDILLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKEREDGEIQKVNDEQSK |
Ga0098038_10650875 | 3300006735 | Marine | MNEILIFVLFISAIIFISFRLGKERGTMLASERAVDIMIAMGYLKEKTNGEIEKVDNEKSN* |
Ga0098038_11634223 | 3300006735 | Marine | MSEILIFGMGIGAIIYISFKLGKERGTMLASARAVDTMIAMGYLKEKPNGEIEKVENDK* |
Ga0098037_11608754 | 3300006737 | Marine | MNDILMFGLGISIIIYISFKLGKERGTMLASERAIDMMIAMGYLKEKANGEIKKVDDEQSK* |
Ga0075476_101308454 | 3300006867 | Aqueous | MENLYFILGIGIVVYLSYQLGKDRGTLLASERVVDIMIAMG |
Ga0075481_103301873 | 3300006868 | Aqueous | IPCSGISPLLLCLTLARLCGVLLVDNLYFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDNEQSK* |
Ga0098050_11134991 | 3300006925 | Marine | ILMFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKEKTNGEIEKVDNDK* |
Ga0105746_13027193 | 3300007973 | Estuary Water | MSEILIFGMGIGAIIYISFKLGKDRGTMLASARAVDTMIAMGYLKEKPNGEIEKVENDK* |
Ga0102960_10074097 | 3300009000 | Pond Water | MENLYFIIGIAIIIYFSYKLGKDKGVYMASERAVDMMIAMGYLKERADGEIQRVDDE* |
Ga0102960_12212021 | 3300009000 | Pond Water | MENLYFILGIGIVVYLSYQLGKDRGTLLASERVVDIMIAMGYLKENVKGE |
Ga0102963_100341112 | 3300009001 | Pond Water | MENLYFIIGIAIIIYFSYKLGKDRGVYMASERAVDMMIAMGYLKERADGEIQRVDDE* |
Ga0102963_10427883 | 3300009001 | Pond Water | VDNLYFILGIAMIIYFSYRLGKDRGALLASERVVNIMIAMGYLKEKANGEIEKVDNEQSK |
Ga0115560_12489022 | 3300009447 | Pelagic Marine | MSEILIFGMGIGAIIYISFKLGKERGTMLASARAVDTMIAMGYLKENPNGEIEKVENDK* |
Ga0126448_10307342 | 3300009466 | Meromictic Pond | VDNVYFILGIAIIIYFSYRLGIDRGTYLASERAVDMMITMGLLKEKANGEIEKVNNDRTE |
Ga0126447_10164791 | 3300009470 | Meromictic Pond | LLVDNVYFILGIAIIIYFSYRLGIDRGTYLASERAVDMMITMGLLKEKANGEIEKVNNDRTE* |
Ga0115570_101150695 | 3300009496 | Pelagic Marine | GIGAIIYISFKLGKERGTMLASARAVDTMIAMGYLKENPNGEIEKVENDK* |
Ga0115011_100123063 | 3300009593 | Marine | MNEILMFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKEKPNGEIEKVENDK* |
Ga0114933_101030386 | 3300009703 | Deep Subsurface | MNEILIFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKETRDGEIEKVENDK* |
Ga0115012_101539243 | 3300009790 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKERADGEIEKVNDEQS* |
Ga0129348_10962302 | 3300010296 | Freshwater To Marine Saline Gradient | VDNLYFILGIAMIIYFSYRLGKDRGTLLASERAVDMMIAMGYLKEKANGEIEKVNDEQSK |
Ga0129342_11983222 | 3300010299 | Freshwater To Marine Saline Gradient | VDNVYFILGIAIIIYFSYRLGIDRGTYLASERAVDMMIAMGLLKEKANGEIEKVNNDRNE |
Ga0136656_11133571 | 3300010318 | Freshwater To Marine Saline Gradient | NVYFILGIAIIIYFSYRLGIDRGTYLASERAVDMMIAMGLLKEKANGEIEKVNNDRTE* |
Ga0160422_104273762 | 3300012919 | Seawater | MDILLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERSDGEIEKVNDEQSK |
Ga0160423_100849473 | 3300012920 | Surface Seawater | MEIFLFFTGISTIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVNDEQSK |
Ga0163110_105509433 | 3300012928 | Surface Seawater | MEILLFFTGISTIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVNDEQSK |
Ga0163109_105221653 | 3300012936 | Surface Seawater | MNDILMFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKEKTNGEIEKVDNDK* |
Ga0163111_101038014 | 3300012954 | Surface Seawater | MEIVLFFTGISTIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVNDEQSK |
Ga0116834_10003246 | 3300013188 | Marine | MDILLFFTGISAIVYMSYKLGKDRGTMLASERAVDMMIAMGYLKERADGEIEKVDNEKSN |
Ga0182090_14741003 | 3300016797 | Salt Marsh | YFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDNEQSK |
Ga0181369_10309605 | 3300017708 | Marine | MSEILIFGMGIGAIIYISFKLGKERGTMLASARAVDTMIAMGYLKEKPNGEIEKVENDK |
Ga0181412_10713554 | 3300017714 | Seawater | MNEILIFVLFVSAIIFISFRLGKERGTMLASERAVDIMIAMGYLKEKTNGEI |
Ga0181373_10788442 | 3300017721 | Marine | MFGLGISIIIYISFKLGKERGTMLASERAIDMMIAMGYLKEKANGEIEKVDDEQSK |
Ga0181382_10967521 | 3300017756 | Seawater | MSEILIFGMGIGAIIYISFKLGKDRGTMLASARAVDTMIAMGYLKEKPNGEIEK |
Ga0181552_101954763 | 3300017824 | Salt Marsh | VLLVDNLYFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDNEQSK |
Ga0181584_1000729016 | 3300017949 | Salt Marsh | VDNLYFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDNEQSK |
Ga0181584_100553128 | 3300017949 | Salt Marsh | MEIILFFTGISAIIYMSYKLGEDRGTMLASERAVDIMIAMGYLKEKANGELQKVDDEKSN |
Ga0181584_102139532 | 3300017949 | Salt Marsh | VDNLYFIIGISAIIYFSYKLGKDKGTLLASERAVDMMIAMGYLKEKANGEIEKADDEQSK |
Ga0181607_1000327815 | 3300017950 | Salt Marsh | VDNLYFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDHEQSK |
Ga0181583_103176293 | 3300017952 | Salt Marsh | MIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDNEQSK |
Ga0181583_103918113 | 3300017952 | Salt Marsh | MIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDHEQSK |
Ga0181580_107576202 | 3300017956 | Salt Marsh | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVDNEKSN |
Ga0181582_104221952 | 3300017958 | Salt Marsh | VDNLYFILGIAMIIYFSYQLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDHEQSK |
Ga0181590_107401352 | 3300017967 | Salt Marsh | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVDNEKYN |
Ga0181600_102853722 | 3300018036 | Salt Marsh | VDNLYFILGIAMIIYFSYRLGKDRGTLLASERAVDMMIAMGYLKEKANGEIEKVDNEQSK |
Ga0181606_102872243 | 3300018048 | Salt Marsh | MIIYFSYRLGKDRGTLLASERAVDMMIAMGYLKEKANGEIEKVDNEQSK |
Ga0181553_106951952 | 3300018416 | Salt Marsh | ISAIIYFSYKLGKDKGTLLASERAVDMMIAMGYLKEKANGEIEKADDEQSK |
Ga0181591_101573228 | 3300018424 | Salt Marsh | FFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVDNEKSN |
Ga0181566_105209794 | 3300018426 | Salt Marsh | MEIILFFTGISAIIYMSYKLGEDRGTMLASERAVDMMIAMGYLKERADGEIEKVDNAK |
Ga0182097_11063481 | 3300019261 | Salt Marsh | SPLLLCLTLARLCGVLLVDNLYFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDHEQSK |
Ga0181562_100222401 | 3300019459 | Salt Marsh | MEIILFFTGISAIIYMSYKLGEDRGTMLASERAVDIMIAMGYLKEKANGEL |
Ga0206124_100279157 | 3300020175 | Seawater | MSEILIFGMGIGAIIYISFKLGKERGTMLASARTVDIMIAMGYLKENPNGEIEKVENDK |
Ga0211654_100068411 | 3300020247 | Marine | MNEILIFVLFISAIIFISFRLGKERGTMLASERAVDIMIAMGYLKEKTNGEIEKVDNEKS |
Ga0211584_100082411 | 3300020248 | Marine | MEILLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKEKANGELQKVEDEQSK |
Ga0211526_100130813 | 3300020264 | Marine | SIMEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERANGEIEKVDNEKSN |
Ga0211519_10586783 | 3300020266 | Marine | MNEILIFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKETRDGEIEKVENDK |
Ga0211519_10685741 | 3300020266 | Marine | MEIILFFTGISAIIYMSYKLGEDRGTMLASERAVDIMIAMGYLKEKANGELQKVDNEKSN |
Ga0211648_100325910 | 3300020267 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVNDEQSK |
Ga0211484_10701322 | 3300020269 | Marine | MEILLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKEKANGELQKVKDEQSK |
Ga0211483_100143365 | 3300020281 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERANGEIEKVDNEKSN |
Ga0211483_100167053 | 3300020281 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKERADGEIEKVSDEQSK |
Ga0211520_10042675 | 3300020294 | Marine | VDGSLMEILLFFTGISAIIYMSYKLGKDHGTMLASERAVDIMIAMGYLKEKANGEIEKVSDEQSK |
Ga0211474_100394011 | 3300020296 | Marine | MEILLFFTGISAIIYMSYKLGKDHGTMLASERAVDIMIAMGYLKEKANGEIEKVSDEQSK |
Ga0211615_10324464 | 3300020299 | Marine | MEILLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKERADGEIEKVNDEQSK |
Ga0211513_10692001 | 3300020305 | Marine | MEILLFFTGISAIIYMSYKLGKDHGTMLASERAVDIMIAMGYLKEKAN |
Ga0211500_12100222 | 3300020371 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKEKTNGEI |
Ga0211497_103636942 | 3300020394 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKERADGEIEKVNDEQSK |
Ga0211583_100168487 | 3300020397 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTILASERAVDLMIAMGYLKERADGEIEKVNDEQSK |
Ga0211499_102396193 | 3300020402 | Marine | MEILLFFTGISAIIYMSYKLGKDRGTMLASERAVDMMIAMGYLKEKANGELQKVEDEQSK |
Ga0211532_102295153 | 3300020403 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADG |
Ga0211659_103909022 | 3300020404 | Marine | MFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKEKTNGEIE |
Ga0211651_100399987 | 3300020408 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEK |
Ga0211644_100106621 | 3300020416 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKV |
Ga0211644_100327129 | 3300020416 | Marine | FFTGISTIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVNDEQSK |
Ga0211576_1000183115 | 3300020438 | Marine | MSEILIFGMGIGAIIYISFKLGKDRGTMLASARAVDTMIAMGYLKEKPNGEIEKVENDK |
Ga0211564_1000355210 | 3300020445 | Marine | MNDILMFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKEKTNGEIEKVDNDK |
Ga0211638_100714542 | 3300020448 | Marine | MEILLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKEREDGEIQKVNDEQSK |
Ga0211638_100979023 | 3300020448 | Marine | MEILLFFTGISAIIYMSYKLGKDHGTMLASERAVDIMIAMGYLKEKADGEIEKVSDEQS |
Ga0211641_102390331 | 3300020450 | Marine | SAIIFISFRLGKERGTMLASERAVDIMIAMGYLKEKTNGEIEKVDNEKSN |
Ga0211551_104739971 | 3300020456 | Marine | MEILLFFTGISAIIYISYKLGKDHGTMLASERAVDIMIAMGYLKEKADGEIEKVNDEQS |
Ga0211614_104453571 | 3300020471 | Marine | NPSRRVDGSLMEILLFFTGISAIIYMSYKLGKDHGTMLASERAVDIMIAMGYLKEKADGEIEKVNDEQS |
Ga0213867_10474962 | 3300021335 | Seawater | VDNLYFILGISAIIYFSYRLGKEKGTLLASERAVDIMIAMGYLKEKANGEIEKVNDEQSK |
Ga0213858_100600201 | 3300021356 | Seawater | NLYFILGISAIIYFSYRLGKEKGTLLASERAVDIMIAMGYLKEKANGEIEKVNDEQSK |
Ga0213860_100087677 | 3300021368 | Seawater | VDNLYFIIGISAIIYFSYRLGKDRGTLLASERAVDMMIAMGYLKEKANGEIEKVDDEQSK |
Ga0213865_100142972 | 3300021373 | Seawater | MNEILIFGLGIGAIIYISFKLGKERGTMLASARAVDMMISMGYLKETDKGEIEKVNDEQS |
Ga0213864_103321211 | 3300021379 | Seawater | MEIILFFTGISAIIYMSYKLGEDRGTMLASERAVDIMIAMGYLKEKANGELQKVDDEKSNXSK |
Ga0222717_1001498211 | 3300021957 | Estuarine Water | MENLYFIIGIAIIIYFSYKLGKDKGVYMASERAVDMMIAMGYLKERADGEIQRVDDE |
Ga0222717_103479161 | 3300021957 | Estuarine Water | MENLYFILGIGIVVYLSYQLGKDRGTLLASERVVDIMIAMGYLKENVKGEIEKIDHEQSK |
Ga0222717_104418771 | 3300021957 | Estuarine Water | MIIYFSYRLGKDRGALLASERVVDMMIAMGYLKEKANGEIEKVDNEQSK |
Ga0222715_100293719 | 3300021960 | Estuarine Water | MENLYFILGIAIIIYFSYKLGKDRGTYLASERAVDMMIAMGYLKENVKGEIEKAHNEQSK |
Ga0222715_100653448 | 3300021960 | Estuarine Water | MIIYFSYRLGKDRGALLASERVVDIMIAMGYLKEKANGEIEKVDNEQSK |
Ga0222714_104669882 | 3300021961 | Estuarine Water | VDNLYFILGIAMIIYFSYRLGKDRGALLASERVVDIMIAMGYLKEKANGEIEKVDNEQSK |
Ga0222719_107471113 | 3300021964 | Estuarine Water | MENLYFILGIGIVVYLSYQLGKDRGTLLASERVVDIMIAMGYLKENVKGEIEKID |
Ga0224906_100446012 | 3300022074 | Seawater | MNEILIFVLFVSAIIFISFRLGKERGTMLASERAVDIMIAMGYLKEKTNGEIEKVDNDK |
Ga0196905_10278843 | 3300022198 | Aqueous | VDNVYFILGIAIIIYFSYRLGIDRGTYLASERAVDMMIAMGLLKEKANGEIEKVNNDRTE |
Ga0196901_10711745 | 3300022200 | Aqueous | VLLVDNVYFILGIAIIIYFSYRLGIDRGTYLASERAVDMMIAMGLLKEKANGEIEKVNNDRTE |
Ga0222669_100179212 | 3300022825 | Saline Water | MNEILIFGLSIGAIIYISFKLGKEQGTMLASARAVDMMISMGYLKETDKGEIEKVENDK |
Ga0255783_103672162 | 3300022923 | Salt Marsh | MEIILFFTGISAIIYMSYKLGEDRGTMLASERAVDIMIAMGYLKERADGEIEKV |
Ga0255773_1004295511 | 3300022925 | Salt Marsh | FFTGISAIIYMSYKLGEDRGTMLASERAVDIMIAMGYLKEKANGELQKVDDEKSN |
Ga0255752_103422022 | 3300022929 | Salt Marsh | VLLVDNLYFIIGISAIIYFSYKLGKDKGTLLASERAVDMMIAMGYLKEKANGEIEKADDEQSK |
Ga0255780_102961131 | 3300022935 | Salt Marsh | ARLCGVLLVDNLYFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDHEQSK |
Ga0255761_1002471310 | 3300023170 | Salt Marsh | VLLVDNLYFILGIAMIIYFSYRLGKDRGTLLASERVVDIMIAMGYLKEKANGEIEKVDHEQSK |
Ga0255768_100286599 | 3300023180 | Salt Marsh | VDNLYFIIGIFAIIYFSYKLGKDKGTLLASERAVDMMIAMGYLKEKANGEIEKADDEQSK |
(restricted) Ga0233444_1000434227 | 3300024264 | Seawater | MNEILIFGLSIGAIIYISFKLGKERGTMLASARAVDMMISMGYLKETDKGEIEKVNDEQS |
Ga0233451_101785441 | 3300024301 | Salt Marsh | MEIILFFTGISAIIYMSYKLGEDRGTMLASERAVDIMIAMGYLKEKAN |
Ga0208150_12233222 | 3300025751 | Aqueous | LGIGIVVYLSYQLGKDRGTLLASERVVDIMIAMGYLKENVKGEIEKIDHEQSK |
Ga0209832_11851753 | 3300025830 | Pelagic Marine | MSEILIFGMGIGAIIYISFKLGKERGTMLASARAVDTMIAMGYLKENPNGEIEKVENDK |
Ga0209929_10209858 | 3300026187 | Pond Water | MIIYFSYRLGKDRGTLLASERVVDMMIAMGYLKEKANGEIEKVDNEQSK |
Ga0209929_10348831 | 3300026187 | Pond Water | IFGLGIGAIIYISFKLGKERGTMLASARAVDMMISMGYLKETDKGEIEKVNDEQSQ |
Ga0208130_10451334 | 3300026258 | Marine | MEIVLFFTGISAIIYMSYKLGKDRGTMLASERAVDLMIAMGYLKERADGEIEKVNDEQPK |
Ga0208410_10849342 | 3300026266 | Marine | MFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKERADGEIEKVNDEQSK |
Ga0209404_100738775 | 3300027906 | Marine | MNEILMFGLGIGAIIYISFKLGKEKGTMLASERAVDIMIAMGYLKEKPNGEIEKVENDK |
Ga0310343_110852313 | 3300031785 | Seawater | ILLFFTGISAIIYMSYKLGKDRGTMLASERAVDIMIAMGYLKEREDGEIQKVNDEQSK |
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