Metagenome Family F071379

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071379
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	109 residues
Representative Sequence	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Number of Associated Samples	65
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.38 %
% of genes near scaffold ends (potentially truncated)	29.51 %
% of genes from short scaffolds (< 2000 bps)	76.23 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.164 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (32.787 % of family members)
Environment Ontology (ENVO)	Unclassified (37.705 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.984 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.10% β-sheet: 0.00% Coil/Unstructured: 52.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF12146	Hydrolase_4	6.56
PF03266	NTPase_1	5.74
PF09107	SelB-wing_3	2.46
PF08240	ADH_N	2.46
PF01734	Patatin	1.64
PF14403	CP_ATPgrasp_2	1.64
PF12695	Abhydrolase_5	1.64
PF16576	HlyD_D23	1.64
PF09722	Xre_MbcA_ParS_C	1.64
PF00689	Cation_ATPase_C	1.64
PF00216	Bac_DNA_binding	1.64
PF00326	Peptidase_S9	1.64
PF00149	Metallophos	0.82
PF04879	Molybdop_Fe4S4	0.82
PF04324	Fer2_BFD	0.82
PF00011	HSP20	0.82
PF04168	Alpha-E	0.82
PF09335	SNARE_assoc	0.82
PF11799	IMS_C	0.82
PF00563	EAL	0.82
PF13671	AAA_33	0.82
PF05728	UPF0227	0.82
PF07589	PEP-CTERM	0.82
PF02310	B12-binding	0.82
PF00690	Cation_ATPase_N	0.82
PF12697	Abhydrolase_6	0.82
PF10576	EndIII_4Fe-2S	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1618	Nucleoside-triphosphatase THEP1	Nucleotide transport and metabolism [F]	5.74
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	2.46
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.64
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.64
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.64
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.64
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.82
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.82
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.82
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.82
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	0.82
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.82
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.82
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.16 %
Unclassified	root	N/A	9.02 %
unclassified Thiobacillus	no rank	unclassified Thiobacillus	0.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.16 %
Unclassified	root	N/A	9.02 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.16 %
Unclassified	root	N/A	9.02 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.07 %
Unclassified	root	N/A	9.02 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	55.74 %
Unclassified	root	N/A	9.02 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	50.00 %
Unclassified	root	N/A	9.02 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	0.82 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Thiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae	47.54 %
Unclassified	root	N/A	9.02 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.82 %
Acidithiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Thiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	47.54 %
Unclassified	root	N/A	9.02 %
Acidithiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus	0.82 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.02 %
Thiobacillus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3.28 %
unclassified Acidithiobacillus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus	0.82 %
Thiobacillus thioparus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thioparus	0.82 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.02 %
Thiobacillus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3.28 %
Acidithiobacillus sp. MC6.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp. MC6.1	0.82 %
Thiobacillus thioparus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thioparus	0.82 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Thiobacillus sp.	species	unclassified Thiobacillus → Thiobacillus sp.	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000228\|TB_PC08_66DRAFT_10103318	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300000231\|TB_LI09_4DRAFT_10116643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	946	Open in IMG/M
3300000854\|WSSedB2T2DRAFT_1031352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	539	Open in IMG/M
3300001213\|JGIcombinedJ13530_108321502	Not Available	570	Open in IMG/M
3300003432\|JGI20214J51088_10001108	All Organisms → cellular organisms → Bacteria → Proteobacteria	18311	Open in IMG/M
3300003858\|Ga0031656_10017232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3024	Open in IMG/M
3300004072\|Ga0055512_10004629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1538	Open in IMG/M
3300004072\|Ga0055512_10030055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	869	Open in IMG/M
3300004241\|Ga0066604_10278009	Not Available	669	Open in IMG/M
3300004481\|Ga0069718_10147126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	687	Open in IMG/M
3300004481\|Ga0069718_15748509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7128	Open in IMG/M
3300004481\|Ga0069718_16065700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1441	Open in IMG/M
3300005045\|Ga0071328_101020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3508	Open in IMG/M
3300005217\|Ga0069005_10058014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	865	Open in IMG/M
3300005217\|Ga0069005_10134873	Not Available	647	Open in IMG/M
3300005219\|Ga0069004_10134583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	688	Open in IMG/M
3300006224\|Ga0079037_100009195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6306	Open in IMG/M
3300006224\|Ga0079037_100250865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1618	Open in IMG/M
3300006224\|Ga0079037_100571892	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300006224\|Ga0079037_101479934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	677	Open in IMG/M
3300009053\|Ga0105095_10039565	All Organisms → cellular organisms → Bacteria → Proteobacteria	2538	Open in IMG/M
3300009053\|Ga0105095_10112291	All Organisms → cellular organisms → Bacteria → Proteobacteria	1480	Open in IMG/M
3300009053\|Ga0105095_10306395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	873	Open in IMG/M
3300009053\|Ga0105095_10396397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	762	Open in IMG/M
3300009078\|Ga0105106_11074320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	571	Open in IMG/M
3300009082\|Ga0105099_10876951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	565	Open in IMG/M
3300009082\|Ga0105099_10910501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	556	Open in IMG/M
3300009087\|Ga0105107_10057451	All Organisms → cellular organisms → Bacteria → Proteobacteria	2747	Open in IMG/M
3300009087\|Ga0105107_10175033	All Organisms → cellular organisms → Bacteria → Proteobacteria	1507	Open in IMG/M
3300009087\|Ga0105107_10312651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1094	Open in IMG/M
3300009087\|Ga0105107_10933390	Not Available	604	Open in IMG/M
3300009087\|Ga0105107_11062700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	564	Open in IMG/M
3300009091\|Ga0102851_10048288	All Organisms → cellular organisms → Bacteria	3401	Open in IMG/M
3300009091\|Ga0102851_10488138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1263	Open in IMG/M
3300009091\|Ga0102851_10665710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1097	Open in IMG/M
3300009091\|Ga0102851_10744801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1042	Open in IMG/M
3300009091\|Ga0102851_13271170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	520	Open in IMG/M
3300009111\|Ga0115026_10098026	All Organisms → cellular organisms → Bacteria → Proteobacteria	1780	Open in IMG/M
3300009120\|Ga0117941_1008661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	5494	Open in IMG/M
3300009131\|Ga0115027_10015709	All Organisms → cellular organisms → Bacteria → Proteobacteria	3120	Open in IMG/M
3300009131\|Ga0115027_10266965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1132	Open in IMG/M
3300009131\|Ga0115027_10366245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	995	Open in IMG/M
3300009153\|Ga0105094_10012980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4450	Open in IMG/M
3300009153\|Ga0105094_10028451	All Organisms → cellular organisms → Bacteria → Proteobacteria	3053	Open in IMG/M
3300009153\|Ga0105094_10188883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1178	Open in IMG/M
3300009166\|Ga0105100_10009204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5725	Open in IMG/M
3300009166\|Ga0105100_10750427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	603	Open in IMG/M
3300009167\|Ga0113563_10206271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1958	Open in IMG/M
3300009167\|Ga0113563_10342637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1570	Open in IMG/M
3300009167\|Ga0113563_11957793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	700	Open in IMG/M
3300009167\|Ga0113563_11994805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	693	Open in IMG/M
3300009171\|Ga0105101_10014485	All Organisms → cellular organisms → Bacteria → Proteobacteria	3777	Open in IMG/M
3300009171\|Ga0105101_10352445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	714	Open in IMG/M
3300009179\|Ga0115028_10054143	All Organisms → cellular organisms → Bacteria → Proteobacteria	2045	Open in IMG/M
3300009179\|Ga0115028_10109987	All Organisms → cellular organisms → Bacteria → Proteobacteria	1584	Open in IMG/M
3300014322\|Ga0075355_1188555	Not Available	568	Open in IMG/M
3300014323\|Ga0075356_1040911	Not Available	977	Open in IMG/M
3300014885\|Ga0180063_1253180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	563	Open in IMG/M
3300018055\|Ga0184616_10168772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	814	Open in IMG/M
3300025000\|Ga0209318_1011757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2358	Open in IMG/M
3300025117\|Ga0208958_1082307	unclassified Thiobacillus → Thiobacillus sp.	1004	Open in IMG/M
3300025963\|Ga0210146_1000218	All Organisms → cellular organisms → Bacteria → Proteobacteria	5214	Open in IMG/M
3300025975\|Ga0210091_1000083	All Organisms → cellular organisms → Bacteria → Proteobacteria	7532	Open in IMG/M
3300027713\|Ga0209286_1018326	Not Available	2553	Open in IMG/M
3300027723\|Ga0209703_1015121	All Organisms → cellular organisms → Bacteria → Proteobacteria	2852	Open in IMG/M
3300027723\|Ga0209703_1117320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1014	Open in IMG/M
3300027731\|Ga0209592_1067417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1327	Open in IMG/M
3300027739\|Ga0209575_10049754	All Organisms → cellular organisms → Bacteria → Proteobacteria	1526	Open in IMG/M
3300027811\|Ga0256868_10401487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	552	Open in IMG/M
3300027818\|Ga0209706_10040371	All Organisms → cellular organisms → Bacteria	2359	Open in IMG/M
3300027818\|Ga0209706_10277712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	798	Open in IMG/M
3300027841\|Ga0209262_10018467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	2935	Open in IMG/M
3300027871\|Ga0209397_10144470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1051	Open in IMG/M
3300027877\|Ga0209293_10186453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1010	Open in IMG/M
3300027887\|Ga0208980_10005901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thioparus	7344	Open in IMG/M
3300032018\|Ga0315272_10027047	All Organisms → cellular organisms → Bacteria → Proteobacteria	2593	Open in IMG/M
3300032256\|Ga0315271_11052211	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300032275\|Ga0315270_10253696	Not Available	1092	Open in IMG/M
3300033406\|Ga0316604_10122355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1378	Open in IMG/M
3300033406\|Ga0316604_10708444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	553	Open in IMG/M
3300033408\|Ga0316605_10288674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1433	Open in IMG/M
3300033408\|Ga0316605_10339677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1333	Open in IMG/M
3300033408\|Ga0316605_10355705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1306	Open in IMG/M
3300033413\|Ga0316603_10007832	All Organisms → cellular organisms → Bacteria	6361	Open in IMG/M
3300033413\|Ga0316603_10297501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1424	Open in IMG/M
3300033414\|Ga0316619_11061266	Not Available	709	Open in IMG/M
3300033414\|Ga0316619_11108483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	695	Open in IMG/M
3300033414\|Ga0316619_11780099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	558	Open in IMG/M
3300033414\|Ga0316619_11937502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	536	Open in IMG/M
3300033416\|Ga0316622_101429468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	808	Open in IMG/M
3300033416\|Ga0316622_101998209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	673	Open in IMG/M
3300033416\|Ga0316622_102359167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	615	Open in IMG/M
3300033419\|Ga0316601_101139927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	781	Open in IMG/M
3300033419\|Ga0316601_101556614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	666	Open in IMG/M
3300033419\|Ga0316601_101898195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	600	Open in IMG/M
3300033433\|Ga0326726_10000256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	51978	Open in IMG/M
3300033433\|Ga0326726_10019792	All Organisms → cellular organisms → Bacteria → Proteobacteria	5849	Open in IMG/M
3300033434\|Ga0316613_10295426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1070	Open in IMG/M
3300033482\|Ga0316627_101497728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	682	Open in IMG/M
3300033482\|Ga0316627_102974202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	504	Open in IMG/M
3300033483\|Ga0316629_10337106	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300033483\|Ga0316629_10589746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	824	Open in IMG/M
3300033483\|Ga0316629_11038380	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300033485\|Ga0316626_10192065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1598	Open in IMG/M
3300033485\|Ga0316626_10437594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1100	Open in IMG/M
3300033485\|Ga0316626_10742583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	857	Open in IMG/M
3300033485\|Ga0316626_11309252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	649	Open in IMG/M
3300033487\|Ga0316630_10363770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1141	Open in IMG/M
3300033487\|Ga0316630_10443514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1048	Open in IMG/M
3300033487\|Ga0316630_10529027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	971	Open in IMG/M
3300033488\|Ga0316621_10314397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1035	Open in IMG/M
3300033513\|Ga0316628_104368000	Not Available	502	Open in IMG/M
3300033521\|Ga0316616_100246368	All Organisms → cellular organisms → Bacteria → Proteobacteria	1836	Open in IMG/M
3300033521\|Ga0316616_100354026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	1596	Open in IMG/M
3300033521\|Ga0316616_101416259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp. MC6.1	896	Open in IMG/M
3300033521\|Ga0316616_101761013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	813	Open in IMG/M
3300033521\|Ga0316616_104277178	Not Available	537	Open in IMG/M
3300033557\|Ga0316617_100385198	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300033557\|Ga0316617_100765846	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300033557\|Ga0316617_101744686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	634	Open in IMG/M
3300034090\|Ga0326723_0000060	All Organisms → cellular organisms → Bacteria → Proteobacteria	35893	Open in IMG/M
3300034169\|Ga0370480_0010806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3213	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.20%
Terrestrial	Environmental → Terrestrial	41.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.36%
Soil	Environmental → Terrestrial → Soil	39.34%
Marine	Environmental → Aquatic → Marine	7.38%
Sediment	Environmental → Aquatic → Sediment	2.46%
Peat	Environmental → Terrestrial → Peat	2.46%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	36.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	29.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.66%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.38%
Lake	Environmental → Aquatic → Freshwater → Lake	2.46%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.46%
Pond	Environmental → Aquatic → Freshwater → Pond	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.82%
Loam	Environmental → Terrestrial → Soil → Loam	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	36.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	29.51%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.66%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.10%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.28%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.46%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.46%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	1.64%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	32.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	20.49%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.66%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	6.56%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.10%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	3.28%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.46%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.46%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.46%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	1.64%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.82%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000228	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- PC08_66	Environmental	Open in IMG/M
3300000231	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_4	Environmental	Open in IMG/M
3300000854	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B2 Tule	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental	Open in IMG/M
3300004241	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005217	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014323	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300025000	Soil microbial communities from Rifle, Colorado, USA - Groundwater E1	Environmental	Open in IMG/M
3300025117	Soil microbial communities from Rifle, Colorado - Rifle Oxygen_injection B1 (SPAdes)	Environmental	Open in IMG/M
3300025963	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025975	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_PC08_66DRAFT_101033182	3300000228	Groundwater	MPQQRFHVVPVLKILFLTCPATALAFVLAACGSHTPPKPDAPSLEQRVDALERRLENLEARPEVKPPFRNKAEIQSHIEALEVERAQLQTRYLAPHPEIRTIDRELDILYTQLRMLE*
TB_LI09_4DRAFT_101166432	3300000231	Groundwater	MSHTRPILPLSCLTVALAFALTACGTQAPPKADTPSLEQQRLLDLERGTERLEARPAVQLPYRNKEEIQAHIKALEDERAKLLTGYLAQHPAIKDIDRRLEILYIQLRMLE*
WSSedB2T2DRAFT_10313522	3300000854	Wetland	LFRSCLTVASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP*
JGIcombinedJ13530_1083215022	3300001213	Wetland	MSPTRLIFLRSCLAAVPAFALVACGSPAPPKADTPSVEQRLLDLELRMQKLEARPVIAPPYRSKAEIQAQINALEAERDKLLTRYHAQHPEIRDIDRQLAILNSQLKMAE*
JGI20214J51088_100011086	3300003432	Wetland	MSPVRSILFRSCLTVASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP*
Ga0031656_100172322	3300003858	Freshwater Lake Sediment	MSPLLPILSRTCLTAVLAFSLAACGSHAPPNPDAPSLEQRVDELERRMESLEARPLVKPPFRSKAEIQANIEALEVERAQLLARYFTPHPEIKDIDRKLEILNTQLKMLE*
Ga0055512_100046291	3300004072	Natural And Restored Wetlands	TVASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP*
Ga0055512_100300551	3300004072	Natural And Restored Wetlands	MSPILPILSRSCLTVALAFALVACATHAPPKTDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKAEIQANIKALEAERDKLLIRYLPQHPDIKDIDRRLEILNNQLKMQE*
Ga0066604_102780091	3300004241	Freshwater	MSPLLPILYRTCLTAVLAFALAACGSHAPPNPDAPSLEQRVDELERRMESLEARPLVKPPFRSKAEIQANIEALEVERAQLLARYFTPHPEIKDIDRKLEILNTQLKMLE*
Ga0069718_101471262	3300004481	Sediment	MSHTRPILWSCLSVALAFALAACGTQAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLRVDYNAQHPAIKDIDRRLEILNVQLRMME*
Ga0069718_157485096	3300004481	Sediment	MSHTLSIPSRSCLSAALAFALAACGTQAPPKADTPPLEQRLFDLERRMERLEARPAVQPPYRNKEDIQAHIKALEEERAKLLAGYLAQHPAIRDIDRRLEILNVQLRMLE*
Ga0069718_160657002	3300004481	Sediment	MSHTRPILPLSCLTVALAFALTACGTQAPPKADTPSLEQQRLLDLERRTERLEARPAVQLPYRNKEEIQAHINALEDERAKLLTGYLAQHPAIKDIDRRLEVLYIQLRMLE*
Ga0071328_1010202	3300005045	Permafrost	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0069005_100580142	3300005217	Natural And Restored Wetlands	VASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP*
Ga0069005_101348732	3300005217	Natural And Restored Wetlands	MSPARPILSRSCLTVALAFALVACATHAPPETDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKAAIQENIKALEEERDKLLIRYFPQHPEIKDIDRRLEILNSQLKMQE*
Ga0069004_101345832	3300005219	Natural And Restored Wetlands	MSPTLPILSKSCQTVALAFALVACATHMPPETDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKAAIEENIKALEEERNKLLIRYFPQHPEIKDIDRRLEILNSQLKMQE*
Ga0079037_1000091958	3300006224	Freshwater Wetlands	MSPTRPILSRSCSTVVLAISLVGCGSSALPKPDAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQMLE*
Ga0079037_1002508652	3300006224	Freshwater Wetlands	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP*
Ga0079037_1005718922	3300006224	Freshwater Wetlands	MSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEEERTQLLADYRAQHPAIKDIDRRLEILNVQLRMLE*
Ga0079037_1014799342	3300006224	Freshwater Wetlands	MSHTRPILSRSCLTVALTLALAACGTPPKADTPSLEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME*
Ga0105095_100395651	3300009053	Freshwater Sediment	MSSKPEVAVSAPTHKNAASFVAARKFAMSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0105095_101122912	3300009053	Freshwater Sediment	MQLRFVAARRFAMSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQLRMPE*
Ga0105095_103063951	3300009053	Freshwater Sediment	VLALALAACATSAPPKADTPSVEQRLVDLERRMERLEARPAVQPAYRTREEILSHINALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME*
Ga0105095_103963972	3300009053	Freshwater Sediment	MVALAFALAACGANAPPKADTLPLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQAHIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0105106_110743201	3300009078	Freshwater Sediment	MQLRFVAARRFAMSPTRPILSLPCLTVALAFALAACGTQAPAPPKADTPPQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERTKLLIDYHAQHPAIKDIDRRLEILNVQLRMLE*
Ga0105099_108769511	3300009082	Freshwater Sediment	RSRMQLRFVAARRFAMSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQLRMPE*
Ga0105099_109105012	3300009082	Freshwater Sediment	LTVALAFALAACGTQAPPKADTPSQEQRLLDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERAALLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0105107_100574514	3300009087	Freshwater Sediment	MSHTLSILCRSCLPAALALALAACATPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEVQAHIKDLETERSRLRVDYHAEHPAIKDIDRRLEILNVQLKMME*
Ga0105107_101750332	3300009087	Freshwater Sediment	VLALALAACATSAPPKADTPSVEQRLVDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME*
Ga0105107_103126513	3300009087	Freshwater Sediment	MSPTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDR
Ga0105107_109333901	3300009087	Freshwater Sediment	MSHPLPIFSLSCLTVALTFALAACGTQAPPKADTPSVEQRLFDLERRMERLEARLAVEPPYRSKVEIQAHIRELEAERAELLTRYLPQHPAIKDIDRMLWILDKQLKELE*
Ga0105107_110627001	3300009087	Freshwater Sediment	QLWFAAARRFAMSLARPILSQSCLAVALALALAACGTQLPKADTPSQEQRLFDLERRMERLEARPAVQPPYRDKAEIEAHIKALEEERTTLLADYHAQHPAIRDIDRRLEILNVQLRMLE
Ga0102851_100482883	3300009091	Freshwater Wetlands	MQLRFVAAWRAAMSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQMLE*
Ga0102851_104881381	3300009091	Freshwater Wetlands	EALARATISDRKPGGLAARRIAMSHTRPILSLPCLTVALALTLAACGTQAPPKTDTPSVEQRLFDLERRMERLEARPVVQPAYRTREEVQAHIKALEDERTKLLTDYHAQHPAIKDIDRRLEILNIQLRMLE*
Ga0102851_106657102	3300009091	Freshwater Wetlands	MLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKAEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP*
Ga0102851_107448012	3300009091	Freshwater Wetlands	MQQRRPTLSLSCLTVALAFALAACGTQMPPKADAPSLEQRLFDLERRTERLEARPAVQPPHRSREEIQAHIKALEAERSKLLIDYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0102851_132711701	3300009091	Freshwater Wetlands	MLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKAEIQANIEALEAERSKLLTHYYPQHPEIKDIDRSLEILNSQLQMLEQP*
Ga0115026_100980262	3300009111	Wetland	MSPTRPILPLSGLTVALALALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEEERTQLLADYRAQHPAIKDIDRRLEILNVQLRMLE*
Ga0117941_10086615	3300009120	Lake Sediment	MQIRFVAARWIAMSHTRLILSRSCLTVALAFALAACGANAPPKADTPLLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQAHIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0115027_100157094	3300009131	Wetland	MQLRFVAAWRAAMSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPAIRDIDRQLAILNSQLQMRE*
Ga0115027_102669652	3300009131	Wetland	SHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEGERTQLLTDYHAQHPAIKDIDRRLEILNVQLRMLE*
Ga0115027_103662451	3300009131	Wetland	LRFVAAWRAAMSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQRLE
Ga0105094_100129808	3300009153	Freshwater Sediment	LALAACGTPAPPKADTPSVEQRLVDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME*
Ga0105094_100284511	3300009153	Freshwater Sediment	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMPE*
Ga0105094_101888832	3300009153	Freshwater Sediment	MQIQSVAARWIAMSHTRLIPSRSCLTVALAFALAACGANAAQKADTPPLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQAHIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0105100_100092045	3300009166	Freshwater Sediment	MSSKPEVAVSAPTHKNAASFVAARKFAMSHTRPILPLSGPTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERAALLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0105100_107504272	3300009166	Freshwater Sediment	MQLRFVAARRFAMSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQ
Ga0113563_102062712	3300009167	Freshwater Wetlands	VLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQMLE*
Ga0113563_103426372	3300009167	Freshwater Wetlands	MLGLTFALAACGSPAPPKAGTPSVEHRLSDLERRVEMLEARPAVQPPYRSKAEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP*
Ga0113563_119577932	3300009167	Freshwater Wetlands	SVAARRFAMSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0113563_119948052	3300009167	Freshwater Wetlands	QFVRQPTTMQIQFVAARKFAMRHTRPILSRSFMMVALAFALAACASNVPPKADTPSLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQANIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0105101_100144852	3300009171	Freshwater Sediment	MSPTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERAALLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0105101_103524452	3300009171	Freshwater Sediment	MSHTRLIPSRSCLTVALAFALAACGANAPPKADTLPLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQAHIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE*
Ga0115028_100541434	3300009179	Wetland	VLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTHYLPQHPEIRDIDRQLAILNSQLQRLE*
Ga0115028_101099873	3300009179	Wetland	MLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP*
Ga0075355_11885551	3300014322	Natural And Restored Wetlands	MQIRFVATRRVAMSPTLPILSRSCQTVALALALVACATHVPPETDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKVEIQENIKALEEERDKLLIRYLPQHPDIKDIDRRLEILNSQLKMLQ*
Ga0075356_10409112	3300014323	Natural And Restored Wetlands	MQIRFVAARRVAMSPARPILSRSCQTVALAFALVACATHMPPETDTPSVEQRLSDLERRVEKLEARPVVEPPYRNKAEIQAHIKALEAERDKLLTRYLPQHPDIKDIDRRLEILNNQLKMQE
Ga0180063_12531801	3300014885	Soil	MSSKPGVAVSAPTHKNAASFVAARKFAMSPTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE*
Ga0184616_101687721	3300018055	Groundwater Sediment	MSHTRPLLSRSCLAVALAFALAACGTQAPPKADAPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSKLLIDYLAQHPAIKDIDRRLEILNVQLRMLE
Ga0209318_10117572	3300025000	Soil	MPDTFPMFPWSCMALVLALAGCGSNAPLKAGTPSIEQRLLELERRMDTMEARFAVAPPYRNKAEIQAHIQELEAERAELLIRYLPQHPAIQDIDRMLWILDKQLKELE
Ga0208958_10823072	3300025117	Soil	MPDTFPMPPRSCMALALAFALAGCGSNALPKPETPSIEKRLLDLERRMDRMEARFAVAPPYRNKAEIQAHIQELEAERAELLTRYLPQHPAIQDIDRMLWILGKQLQELE
Ga0210146_10002182	3300025963	Natural And Restored Wetlands	MSPVRSILFRSCLTVASALAGCGTPAPPKADMPSLEQRLLELERRVERLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP
Ga0210091_10000832	3300025975	Natural And Restored Wetlands	MSPVRSILFRSCLTVASALAGCGTPAPPKADMPSLEQRLLELERRVEGLEARPVIESPYRSKVEVQAHIKALEAERDALLVRYRDQHPDIRDINRRLGILNSQLQMMEQP
Ga0209286_10183264	3300027713	Freshwater Sediment	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERTKLLIDYHAQHPAIKD
Ga0209703_10151211	3300027723	Freshwater Sediment	MSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERAALLADYLPQHPAIKDIDRRLEILNVQLRMM
Ga0209703_11173202	3300027723	Freshwater Sediment	MSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQLRMPE
Ga0209592_10674172	3300027731	Freshwater Sediment	MSHTRPILCLTVALAFALAACGTQAPPKADTPSLEQRLFDLERRTERLEARPAVQPPHRSKEEIQAHIKALEAERSRLLIDYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0209575_100497543	3300027739	Freshwater	MSPLLPILYRTCLTAVLAFALAACGSHAPPKPDAPSLEQRVDELERRMESLEARPLVKPPFRSKAEIQANIEALEVERAQLLARYFTPHPEIKDIDRKLEILNTQLKVLE
Ga0256868_104014871	3300027811	Soil	MPRTLPILPRSCLMVAFAFALAACGSQAPPKTDKPSLEQRLFELERRMERLEARPAVEPPYRSKAEIRAHIEALEEERGELLTRYYAQHPAIKDIDRRLEILNIQLRMPDSHGGEASR
Ga0209706_100403711	3300027818	Freshwater Sediment	MSHTLSILCRSCLPAALALALAACATPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKDLETERSRLRVDYHAEHPAIKDIDRRLEILNVQLKMME
Ga0209706_102777122	3300027818	Freshwater Sediment	PEVAVSAPTHKNAASFVAARKFAMSHTRPILPLSGLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQSPYRTKEEIQAHIKALEDERASLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0209262_100184675	3300027841	Freshwater	MSPLLPILYRTCLTAVLAFSLAACGSHAPPNPDAPSLEQRVDELERRMESLEARPLVKPPFRSKAEIQANIEALEVERAQLLARYFTPHPEIKDIDRKLEILNTQLKMLE
Ga0209397_101444702	3300027871	Wetland	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQRLE
Ga0209293_101864532	3300027877	Wetland	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKAEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP
Ga0208980_100059014	3300027887	Wetland	MSPIFLISSRSCLMLALTFSLAACGSPAPPQTTTPSVEQRLSGLERRMDRLEARPVVQPPYRSKAEIQANIEALEAERVKLLPRYSAQHPDIKDIDRKLAILNSQLKMLESP
Ga0315272_100270472	3300032018	Sediment	MFSIFLIPSRACLMLALTFALVACGSPAPPKADMPSVEQRLSEIERRMERLDARPVVQPPYRSKAEIQANIEALEAERGKLLIRYSAQHPDIKDIDRKVEILNCQLKLLESP
Ga0315271_110522111	3300032256	Sediment	SLLPQKVSMSPIFLSPSRSCLMLALTFALAACGSPAPPKADTPSVEQRLSGLEHRMDMQEARPVVQPPYRSKAEIQANIEALEAERRELLVRYSAQHPDIRDIDRKVGILNCQMKLLESP
Ga0315270_102536961	3300032275	Sediment	MMLAFTLALAACGSPAPPKADTPSVERCLSDLDRRMDILEARPVVQPPYRSKAEIQANIEALEAERGKLLTRYYAQHPDIKDIDRKVEILNCQLKLLESP
Ga0316604_101223551	3300033406	Soil	MSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQSPYRTKEDIQAHIKALEEERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0316604_107084442	3300033406	Soil	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP
Ga0316605_102886741	3300033408	Soil	ALAACGTPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRVME
Ga0316605_103396773	3300033408	Soil	MSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEEERTQLLADYRAQHPAIKDIDRRLEILNVQLRMLE
Ga0316605_103557052	3300033408	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQRLE
Ga0316603_100078327	3300033413	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKPDAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPEIRDIDRQLAILNSQLQRLE
Ga0316603_102975012	3300033413	Soil	MSHTRPILCRSCLTVALALALAACGTPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME
Ga0316619_110612662	3300033414	Soil	MQIRSVTDTKDAMPHTPPILSRAWLTVALSFSLAACGSQAPPKTDTPSLEQRMSELERRVESLEARPVVKPPYRNRAEIQANIRALEDERAELLTHYLPQHPYIKGIDRELEILNSQLKMLE
Ga0316619_111084832	3300033414	Soil	MSPTCPILSRSCSTFLLAIALAGCGSSAPPKADAPSVEQRLSDLERRVEKLEARPAVAPPLRSKAEIESQIKALEAERAKLLARYLPQHPEIRDIDRQLAILNSQLQMRE
Ga0316619_117800991	3300033414	Soil	MSPTRPILPLSGLTVALALALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQVHIKALEDERSKLLIDYHAQHPAIKDIDRRLEILNV
Ga0316619_119375021	3300033414	Soil	MSPTRPIPSVSCLTVALAFALAGCGTQAPLKAEPPSLEQRLFDLERRMERLEARPAVQPPYRTREEIQAQIKALEDERTQLLIDYRAQHPAIKDIDRRLEILNAQ
Ga0316622_1014294681	3300033416	Soil	MSRIFPIPARSCLMLALSFALVACGSQAPPKADSPSVEQRLSDLERRLEMLEARPVVQPPYRSRAEIQTNIEALEAERVRLLARYYPQHPEIKDIDRMLGILNDQLKLLKSP
Ga0316622_1019982091	3300033416	Soil	ILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMSDLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPAIRDIDRQLAILNSQLQMRE
Ga0316622_1023591672	3300033416	Soil	LAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQSPYRTKEEIQAHIKALEEERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0316601_1011399271	3300033419	Soil	MSHTRPILSLPCLTVALALTLAACGTQAPPKTDTPSVEQRLFDLERRMERLEARPVVQPAYRTREEVQAHIKALEDERTKLLTDYHAQHPAIKDIDRRLEILNIQLRMLE
Ga0316601_1015566141	3300033419	Soil	MRHTRPILSRSFMTVALAFALAACASNAPPKADTPSLEQRVLELEHRIEMLEARPEVKPPYRSKEEIQANIKSLEAERGELLTRYFAQHPAIKDIDRRLEILNSQLKMLE
Ga0316601_1018981952	3300033419	Soil	ACGSPAPPKADTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP
Ga0326726_1000025617	3300033433	Peat Soil	MSPTLPILSKSCQTVALAFALVACATHAPPETDTPSVEQRLSDLERRVEKLEARPMVEPPYRNKAAIQENIKALEEERDKLLIRYFPQHPEIKDIDRRLEILNSQLKMQE
Ga0326726_100197923	3300033433	Peat Soil	MSPALPILARSCQAIALAFALVACATHAPPKTDTPSVEQRLSDLERRVEKLEARSVVEPPYRNKAEIQAHIKALEAERDKLLTRYLPQHPDIKDIDRRLEILNSQLKMLE
Ga0316613_102954262	3300033434	Soil	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKAGTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRRLEILYSQLQMLEQP
Ga0316627_1014977282	3300033482	Soil	ACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0316627_1029742021	3300033482	Soil	MSHTRPILSRSCLTLALALALAACGTPPKADTPSLEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEAERTKLLTDYHAQHPAIKDIDRRLEILNVQLRMLE
Ga0316629_103371061	3300033483	Soil	MSRIFPIPARSCLMLALSFALVACGSQAPPKADSPSVEQRLSDLERRLDMLEARPVVQPPYRSRAEIQTNIEALEAERVRLLARYYPQHPEIKDIDRMLGILNDQLKLLKSP
Ga0316629_105897462	3300033483	Soil	MSPIFPIPSRSCLMLGLTFALAACGSPAPPKAGTPSVEHRLSDLERRVEMLEARPAVQPPYRSKVEIQANIEALEAERNKLLAHYYPQHPEIKDIDRR
Ga0316629_110383801	3300033483	Soil	LAACGSQAPPKTGTPSLEQRMFELERRVESLEARPVVKPPYRNRAEIQANIRALEDERAELLTHYLPQHPYIKGIDRELEILNSQLKMLE
Ga0316626_101920652	3300033485	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYFPQHPEIRDIDRQLAILNSQLKMLE
Ga0316626_104375942	3300033485	Soil	MQQRRPTLSLSCLTVALAFALAACGTQMPPKADAPSLEQRLFDLERRTERLEARPAVQPPHRSREEIQAHIKALEAERSKLLIDYLPQHPAIKDIDRRLEILNVQLRMLE
Ga0316626_107425831	3300033485	Soil	CLTVALALTLAACGTQAPPKTDTPSVEQRLFDLERRMERLEARPVVQPAYRTREEVQAHIKALEDERTKLLTDYHAQHPAIKDIDRRLEILNIQLRMLE
Ga0316626_113092521	3300033485	Soil	ALAACGTPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME
Ga0316630_103637701	3300033487	Soil	CLTVALALALAACGTPAPPKADTPSVEQRLFDLERRMERLEARPAVQPAYRTREEIQAHIKALQDERSRLLVDYHAQHPAIKDIDRRLEILNVQLRMME
Ga0316630_104435142	3300033487	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYRPQHPEIRDIDRQLAILNSQLQMLE
Ga0316630_105290271	3300033487	Soil	MSHTLPILSLPCLTVALAFALAACGTQAPAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRTKEEIQAHIKALEDERSKLLIDYHAQHPAIKDIDRRLEILNVQLRMLE
Ga0316621_103143973	3300033488	Soil	MSHTRPILSLSCLTVALAFALAACGTQAPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEDERATLLADYLPQHPAIKDIDRRL
Ga0316628_1043680001	3300033513	Soil	MQIRSVTDTKDAMPHTPPILSRAWLTVALSFSLAACGSQAPPKTDTPSLEQRMFELERRVESLEARPAVKPPYRNKAEIQANIRALEDERAELLTHYLPQHPYIKDIDRELEIL
Ga0316616_1002463682	3300033521	Soil	MSRIFPIPARSCLMLALSFAVAACGSPAPPRPDTPSLEQRLSELERRVEMLEARPLVQPPYRSRAEIQTNIEALEAERVKLLSRYYPQHPEIKDIDRMLQILNDQLKLLGSP
Ga0316616_1003540263	3300033521	Soil	MSPTRPILSRSCSTVVLAISLVGCGSSALPKADAPSVEQRMADLERRVEKLEARPAVEPPFRSKAEIESQIKALEAERASLLTRYLPQHPAIRDIDRQLAILNSQLQMRE
Ga0316616_1014162591	3300033521	Soil	MSRIFPIPARSCLMLALSFALLACGSQAPPKADSPSVEQRLSDLERRLEMLEARPVVQPPYRSRAEIQTNIEALEAERVRLLARYYPQHPEIRNIDRMLEILNDQLKLLKSP
Ga0316616_1017610132	3300033521	Soil	MSPTCPLLSRSCSTFVLAIALAGCGSSAPPKADAPSVEQRLSDLERRVEKLEARPAVAPPLRSKAEIESQIKALEAERAKLLARYLPQHPEIRDIDRQLAILNSQLKMLE
Ga0316616_1042771781	3300033521	Soil	ILSRAWLTVALSFSLAACGSQAPPKTGTPSLEQRMFELERRVESLEARPVVKPPYRNRAEIQANIRALEDERAELLTHYLPQHPYIKGIDRELEILNSQLKMLE
Ga0316617_1003851982	3300033557	Soil	MSHTRPILSRSYLTLVLALALVACETPPKADTPSQEQRLFDLERRMERLEARPAVQPPYRNKEEIQAHIKALEEERTQLLADYRAQHPAIKDIDRRLEILNVQLRMLE
Ga0316617_1007658461	3300033557	Soil	MPHTPPILSRAWLTVALSFSLAACGSQAPPKTDTPSLEQRMSELERRVESLEARPVVKPPYRNRAEIQANIRALEDERAELLTHYLPQHPYIKGIDRELEILNSQLKMLE
Ga0316617_1017446862	3300033557	Soil	SCSTFLLAIALAGCGSSAPPKADAPSVEQRLSDLERRVEKLEARPAVAPPLRSKAEIESQIKALEAERAKLLARYLPQHPEIRDIDRQLAILNSQLKMLE
Ga0326723_0000060_24216_24584	3300034090	Peat Soil	MQIRFVAARRVAMSPTLPILSKSCQTVALAFALVACATHAPPETDTPSVEQRLSDLERRVEKLEARPMVEPPYRNKAAIQENIKALEEERDKLLIRYFPQHPEIKDIDRRLEILNSQLKMQE
Ga0370480_0010806_1538_1870	3300034169	Untreated Peat Soil	MSHTRPILSLPCLTVALASTLAACGTQAPPKTDTPSVEQRLFDLERRMERLEARPVVQPAYRTREEVQAHIKALEDERTKLLTDYHAQHPAIKDIDRRLEILNIQLRMLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071379

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences