Metagenome / Metatranscriptome Family F071481

Basic Information
Family ID	F071481
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	48 residues
Representative Sequence	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPEPNRFSPVT
Number of Associated Samples	94
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.05 %
% of genes near scaffold ends (potentially truncated)	53.28 %
% of genes from short scaffolds (< 2000 bps)	86.89 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (59.016 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (18.852 % of family members)
Environment Ontology (ENVO)	Unclassified (38.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.213 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 23.53% Coil/Unstructured: 76.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF04392	ABC_sub_bind	4.10
PF00589	Phage_integrase	2.46
PF12849	PBP_like_2	2.46
PF13857	Ank_5	1.64
PF02518	HATPase_c	1.64
PF02635	DrsE	0.82
PF13412	HTH_24	0.82
PF00903	Glyoxalase	0.82
PF03480	DctP	0.82
PF13602	ADH_zinc_N_2	0.82
PF06078	DUF937	0.82
PF07536	HWE_HK	0.82
PF03354	TerL_ATPase	0.82
PF00313	CSD	0.82
PF02665	Nitrate_red_gam	0.82
PF10282	Lactonase	0.82
PF13683	rve_3	0.82
PF01548	DEDD_Tnp_IS110	0.82
PF08240	ADH_N	0.82
PF01070	FMN_dh	0.82
PF07508	Recombinase	0.82
PF09954	DUF2188	0.82
PF00216	Bac_DNA_binding	0.82
PF07519	Tannase	0.82
PF00924	MS_channel	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.10
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.82
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.82
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.82
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.82
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.82
COG2181	Nitrate reductase gamma subunit	Energy production and conversion [C]	0.82
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.82
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.82
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.82
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.82
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.82
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
All Organisms	root	All Organisms	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
cellular organisms	root	All Organisms → cellular organisms	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.49 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.21 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.74 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.10 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.10 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.56 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.82 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.56 %
Bradyrhizobium sp. Leo170	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	0.82 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10003486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3578	Open in IMG/M
3300000956\|JGI10216J12902_102650649	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300001081\|JGI12662J13196_1003943	Not Available	1151	Open in IMG/M
3300001867\|JGI12627J18819_10271486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300002245\|JGIcombinedJ26739_100305269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1475	Open in IMG/M
3300005147\|Ga0066821_1012278	Not Available	639	Open in IMG/M
3300005167\|Ga0066672_10705314	Not Available	646	Open in IMG/M
3300005332\|Ga0066388_103761171	Not Available	774	Open in IMG/M
3300005332\|Ga0066388_106904387	Not Available	571	Open in IMG/M
3300005363\|Ga0008090_10216287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1527	Open in IMG/M
3300005434\|Ga0070709_11587866	Not Available	532	Open in IMG/M
3300005436\|Ga0070713_100129761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2221	Open in IMG/M
3300005552\|Ga0066701_10567995	Not Available	695	Open in IMG/M
3300005576\|Ga0066708_10467373	Not Available	811	Open in IMG/M
3300005602\|Ga0070762_10813480	Not Available	633	Open in IMG/M
3300005713\|Ga0066905_100228611	Not Available	1413	Open in IMG/M
3300005713\|Ga0066905_102235635	Not Available	510	Open in IMG/M
3300005764\|Ga0066903_101712183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1197	Open in IMG/M
3300005764\|Ga0066903_102763030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	952	Open in IMG/M
3300005764\|Ga0066903_103158678	Not Available	891	Open in IMG/M
3300005921\|Ga0070766_11274601	Not Available	509	Open in IMG/M
3300006028\|Ga0070717_11313668	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006041\|Ga0075023_100253453	Not Available	705	Open in IMG/M
3300006175\|Ga0070712_100975989	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300006791\|Ga0066653_10471532	Not Available	638	Open in IMG/M
3300006797\|Ga0066659_11166749	Not Available	644	Open in IMG/M
3300006800\|Ga0066660_11517416	Not Available	528	Open in IMG/M
3300006806\|Ga0079220_10091816	Not Available	1552	Open in IMG/M
3300009088\|Ga0099830_11807545	Not Available	510	Open in IMG/M
3300009792\|Ga0126374_10383911	Not Available	976	Open in IMG/M
3300010043\|Ga0126380_10352790	Not Available	1072	Open in IMG/M
3300010043\|Ga0126380_10686766	Not Available	821	Open in IMG/M
3300010046\|Ga0126384_12321755	Not Available	518	Open in IMG/M
3300010047\|Ga0126382_10896868	Not Available	767	Open in IMG/M
3300010048\|Ga0126373_11667190	Not Available	702	Open in IMG/M
3300010048\|Ga0126373_12742832	Not Available	550	Open in IMG/M
3300010048\|Ga0126373_12990833	Not Available	527	Open in IMG/M
3300010048\|Ga0126373_13059804	Not Available	521	Open in IMG/M
3300010301\|Ga0134070_10168533	Not Available	792	Open in IMG/M
3300010339\|Ga0074046_10033104	All Organisms → cellular organisms → Bacteria	3514	Open in IMG/M
3300010358\|Ga0126370_10275108	Not Available	1321	Open in IMG/M
3300010360\|Ga0126372_10512704	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300010360\|Ga0126372_10627285	Not Available	1036	Open in IMG/M
3300010366\|Ga0126379_12892364	Not Available	575	Open in IMG/M
3300010373\|Ga0134128_11327576	Not Available	793	Open in IMG/M
3300010376\|Ga0126381_103316279	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300010397\|Ga0134124_12581980	Not Available	551	Open in IMG/M
3300010398\|Ga0126383_10203608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1903	Open in IMG/M
3300010398\|Ga0126383_10946527	Not Available	948	Open in IMG/M
3300010398\|Ga0126383_11393048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	791	Open in IMG/M
3300010863\|Ga0124850_1013534	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300010863\|Ga0124850_1013586	All Organisms → cellular organisms → Bacteria	2588	Open in IMG/M
3300010868\|Ga0124844_1187806	Not Available	762	Open in IMG/M
3300011003\|Ga0138514_100077304	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300011269\|Ga0137392_10756277	Not Available	803	Open in IMG/M
3300012204\|Ga0137374_10659012	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300012207\|Ga0137381_11767350	Not Available	508	Open in IMG/M
3300012357\|Ga0137384_10098031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2445	Open in IMG/M
3300012357\|Ga0137384_10424512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1096	Open in IMG/M
3300012918\|Ga0137396_10794556	Not Available	696	Open in IMG/M
3300012948\|Ga0126375_10107374	Not Available	1669	Open in IMG/M
3300012948\|Ga0126375_11922230	Not Available	520	Open in IMG/M
3300012971\|Ga0126369_10431427	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300012977\|Ga0134087_10332867	Not Available	721	Open in IMG/M
3300015373\|Ga0132257_100312434	All Organisms → cellular organisms → Bacteria → Proteobacteria	1891	Open in IMG/M
3300016270\|Ga0182036_11014859	Not Available	684	Open in IMG/M
3300016319\|Ga0182033_10551028	Not Available	997	Open in IMG/M
3300016319\|Ga0182033_10753210	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300016341\|Ga0182035_10185226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1633	Open in IMG/M
3300016357\|Ga0182032_10362092	Not Available	1163	Open in IMG/M
3300016357\|Ga0182032_11420903	Not Available	601	Open in IMG/M
3300016387\|Ga0182040_11076728	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300016422\|Ga0182039_10955265	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300016422\|Ga0182039_12052055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	526	Open in IMG/M
3300016445\|Ga0182038_11164867	Not Available	686	Open in IMG/M
3300017822\|Ga0187802_10379090	Not Available	558	Open in IMG/M
3300021358\|Ga0213873_10108470	Not Available	805	Open in IMG/M
3300021444\|Ga0213878_10175469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300021560\|Ga0126371_11603612	Not Available	777	Open in IMG/M
3300021560\|Ga0126371_12113677	Not Available	678	Open in IMG/M
3300021560\|Ga0126371_13803887	Not Available	509	Open in IMG/M
3300025910\|Ga0207684_10585695	Not Available	953	Open in IMG/M
3300025916\|Ga0207663_10809127	Not Available	747	Open in IMG/M
3300025928\|Ga0207700_10373667	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300026865\|Ga0207746_1015391	Not Available	647	Open in IMG/M
3300026990\|Ga0207824_1031663	Not Available	562	Open in IMG/M
3300027603\|Ga0209331_1008224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2761	Open in IMG/M
3300027654\|Ga0209799_1037005	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300027874\|Ga0209465_10074982	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300027874\|Ga0209465_10188216	Not Available	1029	Open in IMG/M
3300027874\|Ga0209465_10283353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300027894\|Ga0209068_10605684	Not Available	638	Open in IMG/M
3300031543\|Ga0318516_10108973	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300031545\|Ga0318541_10617479	Not Available	606	Open in IMG/M
3300031564\|Ga0318573_10050661	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300031573\|Ga0310915_10058051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2519	Open in IMG/M
3300031573\|Ga0310915_11006061	Not Available	581	Open in IMG/M
3300031719\|Ga0306917_11242432	Not Available	577	Open in IMG/M
3300031723\|Ga0318493_10645731	Not Available	591	Open in IMG/M
3300031744\|Ga0306918_10088742	Not Available	2171	Open in IMG/M
3300031744\|Ga0306918_10310669	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300031751\|Ga0318494_10859884	Not Available	531	Open in IMG/M
3300031781\|Ga0318547_10715748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300031793\|Ga0318548_10109333	Not Available	1329	Open in IMG/M
3300031833\|Ga0310917_10267536	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031833\|Ga0310917_10464161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	861	Open in IMG/M
3300031835\|Ga0318517_10045767	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300031846\|Ga0318512_10300512	Not Available	798	Open in IMG/M
3300031910\|Ga0306923_10248294	Not Available	2035	Open in IMG/M
3300031910\|Ga0306923_11637162	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300031912\|Ga0306921_10666903	Not Available	1198	Open in IMG/M
3300031942\|Ga0310916_10140751	Not Available	1982	Open in IMG/M
3300031946\|Ga0310910_10171545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1670	Open in IMG/M
3300031947\|Ga0310909_10053869	All Organisms → cellular organisms → Bacteria	3101	Open in IMG/M
3300031947\|Ga0310909_11040166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300032001\|Ga0306922_10102731	All Organisms → cellular organisms → Bacteria	3025	Open in IMG/M
3300032001\|Ga0306922_10876712	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300032076\|Ga0306924_10117562	Not Available	3021	Open in IMG/M
3300032076\|Ga0306924_11564059	Not Available	696	Open in IMG/M
3300032090\|Ga0318518_10021403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2855	Open in IMG/M
3300032180\|Ga0307471_101230557	Not Available	912	Open in IMG/M
3300032261\|Ga0306920_100096659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4370	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.36%
Host-Associated	Host-Associated	1.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.90%
Aquatic	Environmental → Aquatic	2.46%
Plants	Host-Associated → Plants	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.08%
Sediment	Environmental → Aquatic → Sediment	1.64%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.49%
Loam	Environmental → Terrestrial → Soil → Loam	23.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.28%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026865	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100034863	3300000793	Forest Soil	VEFGARIELPFPSRTVEWLIYHSTVHRFESESSVGITADAVPEPNRFSPVA*
JGI10216J12902_1026506491	3300000956	Soil	MEFGDHTELPFPSRTVEWLIYHSTVHRFESESSVDI
JGI12662J13196_10039432	3300001081	Forest Soil	VEFGEPRIELPVPEPHGRVAHLPLDRAPRFESESSVDITADAVPEPNRVSPVT*
JGI12627J18819_102714863	3300001867	Forest Soil	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRFSP
JGIcombinedJ26739_1003052693	3300002245	Forest Soil	VEFGDRIELHVPEPHGRVAHYHSTVPRLESESSVDITADAVPEPSGISATT*
Ga0066821_10122782	3300005147	Soil	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVDITADAVPEPNRFSPVT*
Ga0066672_107053142	3300005167	Soil	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRFSPVT*
Ga0066388_1037611712	3300005332	Tropical Forest Soil	VEFGDHIELPFPSRTVEWLIYHSTVHRFESESSVDITADAVPEL
Ga0066388_1069043871	3300005332	Tropical Forest Soil	VEFGDGIELPFPSRTVEWLISHSTVHRFESESSVGITADAVPEPN
Ga0008090_102162874	3300005363	Tropical Rainforest Soil	VEFGARIELPFPSRTVGWLNHSTVHRFESESSVGITADAVPEPNRFSPVA*
Ga0070709_115878662	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VEFGDSIELPVPEPARSSGSHSTVHRFKSESSADITADAVPELNRFSPVT*
Ga0070713_1001297611	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VEFGDRIELPVPEPHGRVVNEPLDRAPLESESSVDITADAVPELNRFSPVT*
Ga0066701_105679953	3300005552	Soil	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVDITADAVPE
Ga0066708_104673731	3300005576	Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPELNRFSPVT*
Ga0070762_108134801	3300005602	Soil	PVPEPHGRVAHLPLDRAPRFESESSVDITADAVPEPNRFSPVT*
Ga0066905_1002286111	3300005713	Tropical Forest Soil	VEFGDRVELPFPSRTVEWLIYHSTVHRFESESSVGITADAVPELNRFSPVA*
Ga0066905_1022356351	3300005713	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLISHSTVHRFESESSVGITADAVPEPN
Ga0066903_1017121832	3300005764	Tropical Forest Soil	VDRIELPFPSRTVGWLIYHSTVHRESESSVDITADAVPEPNRFSPVT*
Ga0066903_1027630301	3300005764	Tropical Forest Soil	VEFGDRIELPFPSRTVEWFIYHSTVPRLSESSVGITADAVPEPNRFSPVT*
Ga0066903_1031586782	3300005764	Tropical Forest Soil	VNRIELPFPSRTVEWLIYHSTVHRFESESSVGITADAVPELNRFSPVA*
Ga0070766_112746011	3300005921	Soil	RIELPFPSRTVEWLIYRSTVHRFESESSADITADAVPELNRFSPVT*
Ga0070717_113136682	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVGITA
Ga0075023_1002534532	3300006041	Watersheds	VTASSFPFPSRTVEWLIYHSTVHCFESESSVDITADAVPELNRFSPVT*
Ga0070712_1009759893	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SVFWREIHAVEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVDITADAVPEPNRFSPVT
Ga0066653_104715322	3300006791	Soil	VLPFPSRTVEWLIYHSTVHRFESESSVDITADAVPELNRFSPVT*
Ga0066659_111667491	3300006797	Soil	VIHAVEFDERIELPVPERTVEWVIYHSTVHRLESESSVDITADAVPELNRFSPVT*
Ga0066660_115174162	3300006800	Soil	RLTQWSSVNRIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRFSPVT*
Ga0079220_100918162	3300006806	Agricultural Soil	VTASSFPFPSRTVEWLIYHSTVHCLESESSVDITADAVPELNRFSPVT*
Ga0099830_118075452	3300009088	Vadose Zone Soil	MNRIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPELNRFSPVT*
Ga0126374_103839111	3300009792	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPEPNRFSPVT*
Ga0126380_103527902	3300010043	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVDITA
Ga0126380_106867662	3300010043	Tropical Forest Soil	VEFGGSIELPFPSRTVEWLISHSTVHRFESESSVG
Ga0126384_123217552	3300010046	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVHRFESESSVGITADAVPEPNRFSPVA*
Ga0126382_108968681	3300010047	Tropical Forest Soil	VEFGGSIELPFPSRTVEGLIYHSTVHRFESESSVGITADA
Ga0126373_116671901	3300010048	Tropical Forest Soil	VEFGHRIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPEPNRFS
Ga0126373_127428321	3300010048	Tropical Forest Soil	GERHAVEFGDRIELPFPSRTVEWLIYRSTVHRFESESSVDITADAVPELNRFSPVT*
Ga0126373_129908331	3300010048	Tropical Forest Soil	VEFGGLIELPFPSRTVGWLIYHSTVHRFESESSVDITADAVPEPNRFSP
Ga0126373_130598042	3300010048	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEPN
Ga0134070_101685332	3300010301	Grasslands Soil	VEFGNRIELPFPSRTVEWLIYHSTVPRFENESSVDITADAVPELNRFSPDT*
Ga0074046_100331042	3300010339	Bog Forest Soil	VNRIELPFPSRTVEWLIYHSTVHRFESESSVDITADAVFELNRFSPVA*
Ga0126370_102751081	3300010358	Tropical Forest Soil	VEFGGSIELPFPSRTVEWLISHSTVHRFESESSVGITADAVPEPNRFSPVA*
Ga0126372_105127042	3300010360	Tropical Forest Soil	VEFGDLIELPFPSRTVEWLIYHSTVHRFESESSVGITADAVPEPNRFSPVA*
Ga0126372_106272852	3300010360	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLISHSTVHRFESESSVGITAD
Ga0126379_128923641	3300010366	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEPNRFSPVT*
Ga0134128_113275762	3300010373	Terrestrial Soil	GNRIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRFSPVT*
Ga0126381_1033162792	3300010376	Tropical Forest Soil	VEFGDRVELPFPSRTVEWLIYRSTVHRFESESSVDITADAVPELNRFSPVT*
Ga0134124_125819801	3300010397	Terrestrial Soil	MQAVEFGGDIELPFPSRAVEWLITTRRAPLESESSVSIAADAVPELNRISPVT*
Ga0126383_102036081	3300010398	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEPNRFSP
Ga0126383_109465273	3300010398	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLISHSTVHRFESESSVGITADAVPEPNRFSPVA*
Ga0126383_113930481	3300010398	Tropical Forest Soil	VEFGARIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRFSPVT*
Ga0124850_10135344	3300010863	Tropical Forest Soil	VEFGARIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPEPNRFSPVT*
Ga0124850_10135862	3300010863	Tropical Forest Soil	VEFGDRSELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPEPNRFSPVT*
Ga0124844_11878062	3300010868	Tropical Forest Soil	VEFGDGIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEPNRFSPVT*
Ga0138514_1000773041	3300011003	Soil	EFGERIELPFPSRTVEWLIYHSTVHSFESESSVGITADAVPEPNRFSPVA*
Ga0137392_107562771	3300011269	Vadose Zone Soil	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVDITADAVPEPNRFSPVA*
Ga0137374_106590122	3300012204	Vadose Zone Soil	VEFGDRTELPFPSRTVEWLIYHSTVHRFESESSVDITADAVPEPNRFSPVT*
Ga0137381_117673503	3300012207	Vadose Zone Soil	REIHAVEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRFSPVT*
Ga0137384_100980312	3300012357	Vadose Zone Soil	VEFGDRTELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPELNRFSPVA*
Ga0137384_104245121	3300012357	Vadose Zone Soil	VEFGNRIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVP
Ga0137396_107945562	3300012918	Vadose Zone Soil	VEFGDRIELPFPSRTVEWLIYHSTVPPFESESSVGITADAVPEPNRFSPVA*
Ga0126375_101073741	3300012948	Tropical Forest Soil	MHAVEFGDGIELPFPSRTVEWLIYHSTVPRFESESSVGITADA
Ga0126375_119222302	3300012948	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEP
Ga0126369_104314271	3300012971	Tropical Forest Soil	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRF
Ga0134087_103328673	3300012977	Grasslands Soil	FSGERIQVEFGGGIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPELNRFTPVT*
Ga0132257_1003124341	3300015373	Arabidopsis Rhizosphere	LPRIGFLGERFAVEFGGGIELPFPSRTVEWLIYHSTVHRFESESSVDITADAVPELNRFSPVT*
Ga0182036_110148591	3300016270	Soil	VEFGDSIELPFPSRTVEWLISHSTVHRFESESSVGITADAVPEPNRF
Ga0182033_105510283	3300016319	Soil	MEWSSVDRTELPFPSRTVEWLIYHSTVHRFESESSVDITADAVPEPNRVSPVT
Ga0182033_107532101	3300016319	Soil	VDRTELPFPSRTVGWLIYHSTVHRFESESSVDITADAVPEPNR
Ga0182035_101852263	3300016341	Soil	VEFGDRIEFPVPEPHGRVVHYHSTVPRFESESSVGITADAVPEPNRFS
Ga0182032_103620921	3300016357	Soil	MHELEFGDGIELPFPSRTVEWLIYHSTVHRFESESS
Ga0182032_114209031	3300016357	Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPEP
Ga0182040_110767281	3300016387	Soil	IELHVPEPHGRVAHYHSTVHRLESESSVDITADAVPELSGISATT
Ga0182039_109552652	3300016422	Soil	MEWSSVDRTELPFPSRTVEWLIYHSTVHRFESESSVDITADAVPEP
Ga0182039_120520552	3300016422	Soil	VEFGDCIELPFPSRTVEWEMSHSTVHRFESESSVGITADAVPEPNRFS
Ga0182038_111648671	3300016445	Soil	AVEFGHRIELPFPSRTVEWLIYHSTVHRFESESSVDITADAVPEPNRVSPVT
Ga0187802_103790901	3300017822	Freshwater Sediment	VTASSFPFPSRTVEWLIYHSTVHRFESESSVDITADAVPELNRFSPVT
Ga0213873_101084702	3300021358	Rhizosphere	VEFGDRIELPFPSRTVEWLIYRSTVPRFESESSVDITADAVPEPNRFSPVT
Ga0213878_101754692	3300021444	Bulk Soil	VEFGNRIELPFPSRTVEWFIYHSTVPRLESESSVGITADAVPEPNRFSPVT
Ga0126371_116036121	3300021560	Tropical Forest Soil	VEFGDSIELPFPSRTVEWLIYRSTVHRFESESSVDITAD
Ga0126371_121136771	3300021560	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVDITADAVPEPNRFSPVT
Ga0126371_138038872	3300021560	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVGI
Ga0207684_105856954	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRFSPVT
Ga0207663_108091272	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VEFGNRIELPFPSRTVEWFIYHSTVPRFESESSVDITADAVPEPNRFSPVT
Ga0207700_103736671	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VEFGDRIELPVPEPHGRVVNEPLDRAPLESESSVDITADAVPELNRFSPVT
Ga0207746_10153911	3300026865	Tropical Forest Soil	ERFTEWSSVDRTELPFPSRTVGWLIYHSTVHRFESESSVDITADAVPEPNRVSPVT
Ga0207824_10316632	3300026990	Tropical Forest Soil	MEWSSVDRTELPFPSRTVGWLIYHSTVHRFESESSVDITADAVPEPNRVSPVT
Ga0209331_10082244	3300027603	Forest Soil	VEFGDRIELHVPEPHGRVAHYHSTVPRLESESSVDITADAVPEPSGISATT
Ga0209799_10370051	3300027654	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVHRFESESSVGITADAVP
Ga0209465_100749822	3300027874	Tropical Forest Soil	VEFGDRVELPFPSRTVEWLIYHSTVHRFESESSVGITADAVPEPNRFSPVA
Ga0209465_101882162	3300027874	Tropical Forest Soil	VEFGDSIELPFPSRTVEWLISHSTVHRFQSESSVGITA
Ga0209465_102833532	3300027874	Tropical Forest Soil	VEFGDRIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEPNRFSPVT
Ga0209068_106056842	3300027894	Watersheds	VEFGDRIELPFPSRTVEWLIYHSTVHRFESESSVDITADAVPELNRFSPVT
Ga0318516_101089731	3300031543	Soil	VEFGDSIELPFPSRTVEWLISHSTVHRFESESSVGITAD
Ga0318541_106174792	3300031545	Soil	VEFGNCIELPFPSRTVEWFIYHSTVPRFESESSVDITADAVPEPNRFSPVT
Ga0318573_100506614	3300031564	Soil	VEFGDSIELPFPSRTVEWLISHSTVHRFESESSVGSNSDAVTQP
Ga0310915_100580512	3300031573	Soil	VEFGDSIELPFPSRTVEWLISHSTVHRFESESSVGITADAVPEPNRFSPVA
Ga0310915_110060612	3300031573	Soil	GDSFHALEFGDRIELHVPEPHGRVAHYHSTVHRLESESSADITADAVPELNRFSPVT
Ga0306917_112424321	3300031719	Soil	WSSVNRIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEPNRFSPVT
Ga0318493_106457313	3300031723	Soil	ERFTQWSSVNRIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEPNRFSPVT
Ga0306918_100887421	3300031744	Soil	VEFGDGIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPEPNRFSPVT
Ga0306918_103106691	3300031744	Soil	VEFGDRIELPFPSRTVEWLIYHSTVHRFESESSVGITA
Ga0318494_108598842	3300031751	Soil	VEFGDRIELPFPSRTVGWLIYHSTVHRFESESSVDITADAVPEPNRFSPVT
Ga0318547_107157481	3300031781	Soil	VEFGDRIELPVPEPHGRVVHYHSTVPRFESESSVGITADAVPEPNRFSPVT
Ga0318548_101093333	3300031793	Soil	VEFGDSIELPFPSRTVEWLISHSTVHRFESESSVGITADAVPEPNRFS
Ga0310917_102675362	3300031833	Soil	VEFGDRIELPFPSRTVEWLISHSTVHRFESESSVGITADA
Ga0310917_104641611	3300031833	Soil	ELPFPSRTVEWVIYHSTVHRLESESSVDITADAVPELNRFSPVT
Ga0318517_100457671	3300031835	Soil	VEFGDSIELPFPSRTVEWLISHSTVHRFESESSVGITADAVPEPNR
Ga0318512_103005121	3300031846	Soil	FGDRIELHVPEPYGRVAHYHSTVHRLESESSADITADAVPELNRFSPVT
Ga0306923_102482943	3300031910	Soil	VEFGDGIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVPE
Ga0306923_116371622	3300031910	Soil	VDRTELPFPSRTVGWLIYHSTVHRFESESSVDITADAV
Ga0306921_106669034	3300031912	Soil	ESVFWREIHAAEFGDLIELPFPSRTVGWLITTRPCTALESESSVDITADAVPEPNRFSPV
Ga0310916_101407511	3300031942	Soil	RIELHVPEPHGRVAHYHSTVHRLESESSADITADAVPELNRFSPVT
Ga0310910_101715451	3300031946	Soil	VEFGDRIELPVPEPHGRVVHYHSTVPRFESESSVGITADAVPEP
Ga0310909_100538695	3300031947	Soil	VNRIELPFPSRTVEWLIYHSTVPRFESESSVGITADAVPEPNRFSPVT
Ga0310909_110401661	3300031947	Soil	VEFGDRIEFPVPEPHGRVVHYHSTVPRFESESSVG
Ga0306922_101027315	3300032001	Soil	RWSSVNRIGLPFPSRTVEWLIYHSTVHRFESESSVDITADAVPELNRFSPVT
Ga0306922_108767121	3300032001	Soil	FTQWSSVNRIELPFPSRTVEWLIYHSTVHRFESESSVGITADAVPEPNRFSPVA
Ga0306924_101175621	3300032076	Soil	VEFGDGIELPFPSRTVEWFIYHSTVPRFESESSVGITADAVP
Ga0306924_115640591	3300032076	Soil	TEWSSADRTELPFPSRTVGWLIYHSTVHRFESESSVDITADAVPEPNRVSPVT
Ga0318518_100214033	3300032090	Soil	VEFGDRIEFPVPEPHGRVVHYHSTVPRFESESSVGITADAVPEPNRFSPVT
Ga0307471_1012305573	3300032180	Hardwood Forest Soil	SVTASSFPFPSRTVEWLIYHSTVHRFESESSVDITADAVPELNRFSPVT
Ga0306920_1000966591	3300032261	Soil	VEFGDRIELPFPSRTVEWLIYRSTVHRFESESSVDITAD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071481

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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