Metagenome / Metatranscriptome Family F071492

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071492
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	65 residues
Representative Sequence	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSLFQRLLERLRPHRQDLGGDSQSNYGTSDDPGR
Number of Associated Samples	99
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.69 %
% of genes near scaffold ends (potentially truncated)	24.59 %
% of genes from short scaffolds (< 2000 bps)	89.34 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.918 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.131 % of family members)
Environment Ontology (ENVO)	Unclassified (24.590 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.541 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.24% β-sheet: 0.00% Coil/Unstructured: 58.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01872	RibD_C	4.10
PF05532	CsbD	0.82
PF13359	DDE_Tnp_4	0.82
PF13376	OmdA	0.82
PF00583	Acetyltransf_1	0.82
PF12680	SnoaL_2	0.82
PF00903	Glyoxalase	0.82
PF08803	ydhR	0.82
PF01609	DDE_Tnp_1	0.82
PF02371	Transposase_20	0.82
PF00392	GntR	0.82
PF08327	AHSA1	0.82
PF03992	ABM	0.82
PF00589	Phage_integrase	0.82
PF05988	DUF899	0.82
PF02452	PemK_toxin	0.82
PF11774	Lsr2	0.82
PF13520	AA_permease_2	0.82
PF08241	Methyltransf_11	0.82
PF13374	TPR_10	0.82
PF12697	Abhydrolase_6	0.82
PF07508	Recombinase	0.82
PF00857	Isochorismatase	0.82
PF00171	Aldedh	0.82
PF04545	Sigma70_r4	0.82
PF01545	Cation_efflux	0.82
PF07366	SnoaL	0.82
PF00561	Abhydrolase_1	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	4.10
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	4.10
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.82
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.82
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.82
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.82
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.82
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.82
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.82
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.82
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.82
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.82
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.82
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.82
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.82
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.82
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.82
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.82
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.82
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.82
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
All Organisms	root	All Organisms	45.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
cellular organisms	root	All Organisms → cellular organisms	45.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.33 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.46 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.82 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.82 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.82 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.82 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.92 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.82 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.82 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.82 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.82 %
Myxococcales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis	0.82 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.82 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.92 %
Enhygromyxa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa	0.82 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.82 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.82 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.82 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.82 %
Acrocarpospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora	0.82 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.82 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.92 %
Streptomyces europaeiscabiei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	4.92 %
Acrocarpospora macrocephala	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora macrocephala	0.82 %
Enhygromyxa salina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	0.82 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.82 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.82 %
Blastococcus saxobsidens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	0.82 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.82 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.82 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_104531045	Not Available	895	Open in IMG/M
3300002568\|C688J35102_120221924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300005332\|Ga0066388_100058350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4057	Open in IMG/M
3300005332\|Ga0066388_100437571	Not Available	1950	Open in IMG/M
3300005332\|Ga0066388_100537196	Not Available	1801	Open in IMG/M
3300005434\|Ga0070709_10148139	Not Available	1619	Open in IMG/M
3300005435\|Ga0070714_100844476	All Organisms → cellular organisms → Bacteria → Terrabacteria group	888	Open in IMG/M
3300005435\|Ga0070714_101156194	Not Available	755	Open in IMG/M
3300005436\|Ga0070713_100013576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6021	Open in IMG/M
3300005437\|Ga0070710_10799601	Not Available	674	Open in IMG/M
3300005439\|Ga0070711_100847061	Not Available	778	Open in IMG/M
3300005467\|Ga0070706_100010709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	8513	Open in IMG/M
3300005467\|Ga0070706_100215307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1793	Open in IMG/M
3300005467\|Ga0070706_101041167	Not Available	754	Open in IMG/M
3300005471\|Ga0070698_100176722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2074	Open in IMG/M
3300005545\|Ga0070695_101109088	Not Available	648	Open in IMG/M
3300005553\|Ga0066695_10314651	Not Available	986	Open in IMG/M
3300005555\|Ga0066692_10603807	Not Available	689	Open in IMG/M
3300005569\|Ga0066705_10313812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	993	Open in IMG/M
3300005614\|Ga0068856_102026782	Not Available	586	Open in IMG/M
3300005764\|Ga0066903_101030476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1508	Open in IMG/M
3300005764\|Ga0066903_104568904	Not Available	738	Open in IMG/M
3300006175\|Ga0070712_100495055	Not Available	1024	Open in IMG/M
3300006575\|Ga0074053_11730311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1028	Open in IMG/M
3300006580\|Ga0074049_12212467	Not Available	540	Open in IMG/M
3300006755\|Ga0079222_11557296	Not Available	624	Open in IMG/M
3300006755\|Ga0079222_12440448	Not Available	524	Open in IMG/M
3300006806\|Ga0079220_10431505	Not Available	873	Open in IMG/M
3300006953\|Ga0074063_12498769	Not Available	522	Open in IMG/M
3300006954\|Ga0079219_11794186	Not Available	573	Open in IMG/M
3300009137\|Ga0066709_101772706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300009176\|Ga0105242_10483391	Not Available	1174	Open in IMG/M
3300009551\|Ga0105238_12053985	Not Available	605	Open in IMG/M
3300010043\|Ga0126380_10779970	Not Available	779	Open in IMG/M
3300010043\|Ga0126380_11234042	Not Available	646	Open in IMG/M
3300010048\|Ga0126373_10208481	Not Available	1899	Open in IMG/M
3300010048\|Ga0126373_10383312	Not Available	1426	Open in IMG/M
3300010048\|Ga0126373_11224416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	817	Open in IMG/M
3300010154\|Ga0127503_11061690	Not Available	558	Open in IMG/M
3300010154\|Ga0127503_11248153	Not Available	528	Open in IMG/M
3300010335\|Ga0134063_10717703	Not Available	518	Open in IMG/M
3300010343\|Ga0074044_10044866	Not Available	3056	Open in IMG/M
3300010358\|Ga0126370_11746061	Not Available	600	Open in IMG/M
3300010359\|Ga0126376_10149781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1867	Open in IMG/M
3300010359\|Ga0126376_10153831	Not Available	1847	Open in IMG/M
3300010360\|Ga0126372_10576148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1075	Open in IMG/M
3300010396\|Ga0134126_12843298	Not Available	524	Open in IMG/M
3300010398\|Ga0126383_12320206	Not Available	622	Open in IMG/M
3300012096\|Ga0137389_11794571	Not Available	509	Open in IMG/M
3300012198\|Ga0137364_10046058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2882	Open in IMG/M
3300012200\|Ga0137382_10144359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1609	Open in IMG/M
3300012201\|Ga0137365_10038498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3653	Open in IMG/M
3300012201\|Ga0137365_10097687	Not Available	2211	Open in IMG/M
3300012208\|Ga0137376_10161276	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1932	Open in IMG/M
3300012356\|Ga0137371_10157013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1784	Open in IMG/M
3300012948\|Ga0126375_10906496	Not Available	709	Open in IMG/M
3300012985\|Ga0164308_11144856	Not Available	699	Open in IMG/M
3300013307\|Ga0157372_10156799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2630	Open in IMG/M
3300014497\|Ga0182008_10432076	Not Available	713	Open in IMG/M
3300015372\|Ga0132256_100519895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	1301	Open in IMG/M
3300016357\|Ga0182032_10981639	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300016387\|Ga0182040_10700752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	828	Open in IMG/M
3300016404\|Ga0182037_10861573	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300017792\|Ga0163161_10451711	Not Available	1039	Open in IMG/M
3300017970\|Ga0187783_10051165	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300018060\|Ga0187765_11018038	Not Available	569	Open in IMG/M
3300018064\|Ga0187773_11126426	Not Available	523	Open in IMG/M
3300018468\|Ga0066662_10529700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1082	Open in IMG/M
3300020579\|Ga0210407_10006780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8718	Open in IMG/M
3300020581\|Ga0210399_10306709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1325	Open in IMG/M
3300020582\|Ga0210395_11207482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300021420\|Ga0210394_10376232	Not Available	1249	Open in IMG/M
3300021560\|Ga0126371_10241104	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300021560\|Ga0126371_10944978	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300021560\|Ga0126371_13683643	Not Available	517	Open in IMG/M
3300025898\|Ga0207692_10224927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora macrocephala	1114	Open in IMG/M
3300025905\|Ga0207685_10344497	Not Available	750	Open in IMG/M
3300025910\|Ga0207684_11307090	Not Available	597	Open in IMG/M
3300025915\|Ga0207693_10850716	Not Available	701	Open in IMG/M
3300025916\|Ga0207663_11205796	Not Available	609	Open in IMG/M
3300025927\|Ga0207687_10903648	Not Available	756	Open in IMG/M
3300025928\|Ga0207700_11385991	Not Available	625	Open in IMG/M
3300025942\|Ga0207689_11030733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300026023\|Ga0207677_10827088	Not Available	831	Open in IMG/M
3300027775\|Ga0209177_10144440	Not Available	801	Open in IMG/M
3300027787\|Ga0209074_10064682	Not Available	1155	Open in IMG/M
3300027787\|Ga0209074_10328649	Not Available	620	Open in IMG/M
3300028807\|Ga0307305_10575790	Not Available	502	Open in IMG/M
3300028828\|Ga0307312_10268770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1106	Open in IMG/M
3300031231\|Ga0170824_118683309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1080	Open in IMG/M
3300031543\|Ga0318516_10094898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	1680	Open in IMG/M
3300031546\|Ga0318538_10222653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	1010	Open in IMG/M
3300031546\|Ga0318538_10302722	Not Available	861	Open in IMG/M
3300031561\|Ga0318528_10054038	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300031561\|Ga0318528_10252162	Not Available	947	Open in IMG/M
3300031561\|Ga0318528_10714738	Not Available	536	Open in IMG/M
3300031564\|Ga0318573_10355986	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300031573\|Ga0310915_10470761	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300031681\|Ga0318572_10117347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1517	Open in IMG/M
3300031681\|Ga0318572_10618370	Not Available	645	Open in IMG/M
3300031723\|Ga0318493_10175198	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300031723\|Ga0318493_10784663	Not Available	536	Open in IMG/M
3300031751\|Ga0318494_10723783	Not Available	583	Open in IMG/M
3300031751\|Ga0318494_10859113	Not Available	532	Open in IMG/M
3300031768\|Ga0318509_10369132	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031782\|Ga0318552_10506413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300031805\|Ga0318497_10530532	Not Available	660	Open in IMG/M
3300031833\|Ga0310917_10359752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	988	Open in IMG/M
3300031879\|Ga0306919_10440734	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300031896\|Ga0318551_10634689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300031912\|Ga0306921_10828597	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1055	Open in IMG/M
3300031945\|Ga0310913_11220333	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300032001\|Ga0306922_12072570	Not Available	552	Open in IMG/M
3300032035\|Ga0310911_10318185	Not Available	897	Open in IMG/M
3300032063\|Ga0318504_10248795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	836	Open in IMG/M
3300032180\|Ga0307471_104167670	Not Available	511	Open in IMG/M
3300032261\|Ga0306920_100315469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2328	Open in IMG/M
3300032783\|Ga0335079_10840492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300032783\|Ga0335079_12162561	Not Available	532	Open in IMG/M
3300032828\|Ga0335080_10549290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300033158\|Ga0335077_10270465	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1874	Open in IMG/M
3300033290\|Ga0318519_10157340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	1274	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.80%
Host-Associated	Host-Associated	8.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.16%
Plants	Host-Associated → Plants	8.20%
Aquatic	Environmental → Aquatic	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.28%
Freshwater	Environmental → Aquatic → Freshwater	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.93%
Loam	Environmental → Terrestrial → Soil → Loam	19.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.28%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.46%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1045310452	3300000956	Soil	MSIGNNPADGAWAEQRRYKFAADADAARAARLAGHKSPFRRLLERLRPHRQEPGDDSHGSHGTLGDPGH*
C688J35102_1202219241	3300002568	Soil	MSMGNSPAEKAIGKQRFERLMAKADADRAARLAGHKSLFRRLLERLRPHVQQPISDSEPRPSDP*
Ga0066388_1000583503	3300005332	Tropical Forest Soil	MSFGNNPADSAAGKQHSGRFMAKADADRAARLAGHKSLFQRLLERLRPHRQDRGGDSQSNYGTSEDPGR*
Ga0066388_1004375713	3300005332	Tropical Forest Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSFFQRLLERLRPQRQELGGDSQSNYGTSDDPGR*
Ga0066388_1005371961	3300005332	Tropical Forest Soil	MSMGNSPADRYIKTERLMAKADADRTARLAGCKPLVERLLERLRPHRQRSTGDLHGSQGNLDDPGD*
Ga0070709_101481395	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSFGHNPADSAAGKQHSERFMAKADADRAARLAGRKSLFERLLERLRPHRQDSGGDPRSNYGTSDDPG*
Ga0070714_1008444762	3300005435	Agricultural Soil	MSFGNNPADSAESKWHTDRARAQADAYRAARLAGYKSPFRRLLERLRPHRQEPGDPHGSYGTSDDPGH*
Ga0070714_1011561942	3300005435	Agricultural Soil	MSFGNNPADSAAGKQHSDRFMAKAEADRAARLTGRKSLFQRLLDRLRPNRQGLGGDSQSNYGTSDDPGR*
Ga0070713_1000135767	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGSSPAEKAIVKQQSERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPISDSELQPSDP*
Ga0070710_107996012	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGNSPAEKAIIKQQSERLMAKADADRAAHLAGHKSLFRRLLERLRPHGQQPISDSEPQPFDP*
Ga0070711_1008470612	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGSSPAEKAIVKQQSERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPISDSEPQPFDP*
Ga0070706_1000107094	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGNSPADRAIGKQHSERLMAKADADRAARLAGHKSPARRLLERLRPHRQQPIGDLHSAPSTLDDPGH*
Ga0070706_1002153071	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSFGNNPADEAGFKQNSERLMAKADADRAARLAGHKSLFRRLLERLRPPRQEPGGDPHSSYGTLDDPGQ*
Ga0070706_1010411671	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGNSPADDAGSKMQYERLLAKADADRAARLAGHKSLFRRLLERLRPHRPDPGGGPHSSHGDTGH*
Ga0070698_1001767224	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSFGNNPADEAGFKQNSERLMAKADADRAARLAGHKSLFRRLLERLRPHRQEPGGDPHSSYGTLDDPGQ*
Ga0070695_1011090882	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGNSPAERAIGKQHSERLMAKADADRAARLAGHKSLFRCLLERLRPHRQQSISDSEPQPSDP*
Ga0066695_103146512	3300005553	Soil	MSFGNNPADGAGFKQNSERLMAKADADRAARLAGHKSLFRRLLERLRPHRQKPGGDPHSSYGTLDDPGQ*
Ga0066692_106038072	3300005555	Soil	MSFGNNPADKAGFKQNSERLMAKADADRAARLAGHKSLFRRLLERLRPPRQEPGGDPHSSYGTLDDPGQ*
Ga0066705_103138122	3300005569	Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSLVQRLLERLRPHRQYPGGDPQSNYGTSDDPG*
Ga0068856_1020267821	3300005614	Corn Rhizosphere	MSMGNSPAERAIVKQQSERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPISDSEPQPSDP*
Ga0066903_1010304764	3300005764	Tropical Forest Soil	MSFGNNPADSAAGKQHSERFMAKAEADRAARLTGRKSLLQRLLERLRPHRQGLGGDSQSNYGTSGDPGR*
Ga0066903_1045689042	3300005764	Tropical Forest Soil	MSFGSNPADSAAGKQHQERFMASADADRAARLAGRKSLFQRLLERLRPHRQDPGGDSPSTYGTSDGPGR*
Ga0070712_1004950551	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGDSPAERAIVKQQSERLMAKADAERAARLAGHKSLFWRLLERLRPHGQQPISDSEPQPSDP*
Ga0074053_117303113	3300006575	Soil	MSFGNSPADNREMILERLRAQAEVDRASRLAGHKSLLRRVLERLRPHRQEPGGDPQSNYGTSDDPGH*
Ga0074049_122124672	3300006580	Soil	MSFGNNPADSRKTHLDPLMAQAEADRAARLAGHKSLLRRVLERLRPHRQEPGGDPQSNYGTSDDPGH*
Ga0079222_115572962	3300006755	Agricultural Soil	MSMGDSPAERAIVKQQSERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPISDSEPQPSDP*
Ga0079222_124404481	3300006755	Agricultural Soil	MSMGDSPAERAIGKQHSERLMAKADADRTARLAGHKSLFRCLLERLRSHRQQPISDSEPQPSDP*
Ga0079220_104315053	3300006806	Agricultural Soil	MSMGDSPAERAIGKLHSERLMAKADADRTARLAGHKSLFRCLLERLRSHRQQPISDSEPQPSDP*
Ga0074063_124987692	3300006953	Soil	MSFGNNPADSAAGKQHPERFMAKADADRAARLAGHKSLFRRLLERLRPHRQQPISDSEPQPSDP
Ga0079219_117941861	3300006954	Agricultural Soil	MSMGNSPAEKAIIKQQSERLMAKADADRAAHLAGHKSLFRRLLERLRPHGQQPISDSEPQPSDP*
Ga0066709_1017727061	3300009137	Grasslands Soil	MSFGNNPADSAAGRQHSDRLMAQADADRAARSGGRKPLFQRLLERLRPHRQDLGGDSQSNYGTSDDSGR*
Ga0105242_104833911	3300009176	Miscanthus Rhizosphere	MSMGNSPAERAIGKQHSERLMAKADADRAARLAGHKSLFRCLLERLRPHRQQPISDSEPQPSDP*
Ga0105238_120539852	3300009551	Corn Rhizosphere	MSMGNSPAERAIGKQHSERLMAKADADRAARLAGHKSLFRCLLERLRPHRQQPMSDSEPQPSDP*
Ga0126380_107799701	3300010043	Tropical Forest Soil	VSFGNNPADSAAGKQHSERFMAKAGADRAARLAGHKSLFRRLLERLRPHSQDPGGDPQSNYGTSGDPG*
Ga0126380_112340421	3300010043	Tropical Forest Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSFFQRLLERLRPERQEQGGDSQSNYGTSDDPGR*
Ga0126373_102084812	3300010048	Tropical Forest Soil	MSFGNNPGDSGWGKQNLDRLVAQADADRAARLAGHKSFVRRLLEHMRPHRQKPADDLSRPPAD*
Ga0126373_103833121	3300010048	Tropical Forest Soil	MSFGNNPADSAQGKWHTDRLRAQADADRAARSAGHKSPFRRLLERLRPRRQEPGDPHDDYGTSDDPGN*
Ga0126373_112244162	3300010048	Tropical Forest Soil	MSFWNNPAEDAIGQQYRDRRMAQADTERAARLAGHKSLFRRLLQRLRPHRQEPGSDSHSSYGTGGP*
Ga0127503_110616902	3300010154	Soil	FGNSPADNREMILERLRAQAEVDRASRLAGHKSLLRRVLERLRPHHQEPDSDPQSNYGTSDDPGH*
Ga0127503_112481531	3300010154	Soil	IMSMGNSPAERAIGKQHSERLMAKADADRAARLAGHESLFRRLLERLRPHGQQPMSDSEPRPSDP*
Ga0134063_107177032	3300010335	Grasslands Soil	MSIGSSPADRDWQSEGLRAKADADRAARLAGHKPLFQRLLERLRPHREEPGS
Ga0074044_100448662	3300010343	Bog Forest Soil	MSMGNSPADSAPGKLRSEQLMAQADADRAARLAGRKSLFRRLLERLRPHRQEPSGDSHSSYGTGGP*
Ga0126370_117460612	3300010358	Tropical Forest Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSFFQRLLERLRPQRQELGGDSQSNYGTSD
Ga0126376_101497811	3300010359	Tropical Forest Soil	VSFGNNPADSAAGKQHSERFMAKADADRAARLAGHKSLFQRLLERLRPHSQDPGGDPQSNYGTSGDPG*
Ga0126376_101538312	3300010359	Tropical Forest Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSFFQRLPERLRPQRQELGGDSQSNYGTSDDPGR*
Ga0126372_105761482	3300010360	Tropical Forest Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSLFQRLFERLRPHRQDPGGDPQSNYGTSGDPG*
Ga0134126_128432981	3300010396	Terrestrial Soil	MSMGNSPAEKAIGKQHSERLMAKADADRAARLAEHKSLFRRLLERLRPHVQQPISDSKPQPSDP*
Ga0126383_123202062	3300010398	Tropical Forest Soil	LVTTLLTASKKHYERFMAKADADRAARLAGRKSLFQRLLERLRPHRQGPGGDSQSNYGTSDDSGR*
Ga0137389_117945711	3300012096	Vadose Zone Soil	MSMGNSPADRAIGKQHSERLMAKADAERAARLAGHKSLFRRLLERLRPHGQQPISDS*
Ga0137364_100460582	3300012198	Vadose Zone Soil	MSFGNNPADSAAGKQHSDRLMAQADADRAARLAGRKPLFQRLLKRLRPHHQDLAEDSQSNYGTSDDSGS*
Ga0137382_101443591	3300012200	Vadose Zone Soil	MSFGNNPADSAAGKQHSDRLMAQANADRAARLAGRKPLFQRLLKRLRPHHHQDLGGDSQGNYGTSDDPGR*
Ga0137365_100384982	3300012201	Vadose Zone Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSLFQRLLERLRPHRQDLGGDSQSNYGTSDDPGR*
Ga0137365_100976875	3300012201	Vadose Zone Soil	MSLGGGPLDDAWGKQRRDSFADKAEADRAARLAGHKSLFRRLLDRLRPHRQEPGDNPHSSYGTSDDPGH*
Ga0137376_101612762	3300012208	Vadose Zone Soil	MSFGNNPADSATGKQHSDRLMAQANADRAARLAGRKPLFQRLLKRLRPHHHQDLGGDSQGNYGTSDDPGR*
Ga0137371_101570133	3300012356	Vadose Zone Soil	MSFGNNPADSAAGKQHSDRLMAQADADRAARLAGRKPLYQRLLKRLRPHHQDLAEDSQSNYGTSDDSGS*
Ga0126375_109064961	3300012948	Tropical Forest Soil	VSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSFFQRLLERLRPNRHDLSGDSQSNHGTSDDSGR*
Ga0164308_111448562	3300012985	Soil	MSFGHNPADSAAGKQHSERFMAKADADRAARLAGRRSLFERLLERLRPHRQDLGGDSPSNYGTSDDPGR*
Ga0157372_101567993	3300013307	Corn Rhizosphere	MSMGNSPAERAIGKQHSERLMAKADADRAARLAGHKSRFRCLLERLRPHRQQPISDSEPQPSDP*
Ga0182008_104320761	3300014497	Rhizosphere	MSMGNSPAEQAIVKQQSERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPISDSEPQPSDP*
Ga0132256_1005198952	3300015372	Arabidopsis Rhizosphere	MSMGNSPAERAIGKQHSERLMAKADADRAVRLAGHKSLFRRLLERLRPHGQQPISDSGPQPSDP*
Ga0182032_109816392	3300016357	Soil	MTFGNNPADSKEWRLQQAAAEREVERAARLAGHKSLLRRVLERLRPHRQEPGGDPQS
Ga0182040_107007521	3300016387	Soil	EDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSLGSYGTRGP
Ga0182037_108615731	3300016404	Soil	MTFGNNPADSKEWRLQQAAAEREVERAARLAGHKSLLRRVLERLRPHRQEPGGDPQSNYGTSDDPGR
Ga0163161_104517112	3300017792	Switchgrass Rhizosphere	MSMGNSPAERAIGKQHSERLMAKADADRAARLAGHKSLFRCLLERLRPHRQQPISDSEPQPSDP
Ga0187783_100511654	3300017970	Tropical Peatland	MSFWNNPADDAAGQQYRDSKMARADTARAARLAGHKSVFRRLVERLRPHRQEPGDPQSNYGTSDDPGR
Ga0187765_110180381	3300018060	Tropical Peatland	MSFGNNPADSAAGKQHDERFMAKADADRAARLAGRKSLFQRLLERLRPHRQDLGGHSQSNYGTSGYPDR
Ga0187773_111264261	3300018064	Tropical Peatland	MSFGNNPADSRKTILDPFMAQAEADRAARLAGHKSFLRRVLERLRPHRQEPGGDPQSNHGTSDDPGR
Ga0066662_105297001	3300018468	Grasslands Soil	MSMGNSPAEKAIGKQRFERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPISDSEPRPSDP
Ga0210407_1000678010	3300020579	Soil	MSMGNSPAERAIIKQQSERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPISDSEPQPSDP
Ga0210399_103067091	3300020581	Soil	MGMGNSPADKYFNELRTKADADRAARLAGHKSLFRRLLERLRPHGQQPVSDSGPPAF
Ga0210395_112074821	3300020582	Soil	MGMGNSPADKYFNELRAKADADRAARLAGHESLFRRLLERLRPHGQQPLNDSEPPHSDP
Ga0210394_103762322	3300021420	Soil	MSFGNNPADSAQGKWHTDPLRAKADADRAARLAGHKSPFRRLLERLRPHRQEPGDPHGSYGTSDDPGH
Ga0126371_102411044	3300021560	Tropical Forest Soil	MSFWNNPAEDAIGQQYRDRRMAQADTERAARLAGHKSLFRRLLQRLRPHRQEPGSDSHSSYGTGGP
Ga0126371_109449782	3300021560	Tropical Forest Soil	MSFGNNPADSAQGKGHTDRLRAQADADRAARLAGHKSLFRRLLERLRPHRQEPGDPHGSYGTLDDPGN
Ga0126371_136836431	3300021560	Tropical Forest Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSFFQRLLERLRPQRQELGGDSQSNYGTSDDPGR
Ga0207692_102249272	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGNSPAEKAIIKQQSERLMAKADADRAAHLAGHKSLFRRLLERLRPHGQQPISDSEPQPFDP
Ga0207685_103444971	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ADSAAGKQHSERFMAKADADRAARLAGRKSLFERLLERLRPHRQDSGGDPRSNYGTSDDP
Ga0207684_113070901	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGNSPADDAGSKMQYERLLAKADADRAARLAGHKSLFRRLLERLRPHRPDPGGGPHSSHGDTGH
Ga0207693_108507161	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGDSPAERAIVKQQSERLMAKADAERAARLAGHKSLFWRLLERLRPHGQQPISDSEPQPSDP
Ga0207663_112057961	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGNSPAEKAIVKQQSERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPISDSEPQPSDP
Ga0207687_109036481	3300025927	Miscanthus Rhizosphere	GKQHSERLMAKADADRAARLAGHKSLFRCLLERLRPHRQQPISDSEPQPSDP
Ga0207700_113859911	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSMGNSPAERAIVKQQSERLMAKADADRAARLAGHKSLFRRLLERLRPHGQQPIGDSEPQPSD
Ga0207689_110307331	3300025942	Miscanthus Rhizosphere	MSMGNSPAERAIGKQHSERLMAKADADRAARLAGHKSLVRRLLERLRPHRQQPISDSEPQPSDP
Ga0207677_108270881	3300026023	Miscanthus Rhizosphere	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGRKSLFERLLERLRPHRQDSG
Ga0209177_101444402	3300027775	Agricultural Soil	MSMGNSPAERAIVKQQSERLMAKADADRAGRLAGHKSLFRRLLERLRPHGQQPISDSEPQPSDP
Ga0209074_100646822	3300027787	Agricultural Soil	MSMGDSPAERAIGKQHSERLMAKADADRTARLAGHKSLFRCLLERLRSHRQQPISDSEPQPSDP
Ga0209074_103286491	3300027787	Agricultural Soil	MSMGNSPAERAIVKQQSERLMAKADADRAGRLAGHKSLFRRLLERLRPHGQQPISDSEPQPSNPKNGD
Ga0307305_105757901	3300028807	Soil	MSFGNNPADSAAGKQHSERLMAKADADRAACLAGRKSLFQRLLERLRPHRQDLGGDPQSNYGINHDPGR
Ga0307312_102687702	3300028828	Soil	MSMGNSPAERAIGKQHSERLMAKPDADRAARLAGHKSLFRRLLECLRPHRQQPISDSEPQPSDP
Ga0170824_1186833091	3300031231	Forest Soil	MSFGNNPAGSAAGKQHSDRLMAQAAADRAARLAGRKPLFQRLLKRLRPHHQDLGGDSQGNYGTSDDPGR
Ga0318516_100948982	3300031543	Soil	MSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSLGSYGTRGP
Ga0318538_102226532	3300031546	Soil	MTLGGRQMSFGNNPADSAAGKQHSERFMAKADADRAARSAGHKSLFQRLLERLRPPRQNPGGDSQSNYGTSDDPGH
Ga0318538_103027221	3300031546	Soil	MSMGDSPADRAIGKQVERLMAKADADRAARLAGHKSLFRRLLERLGPHGRQPVSDSKPRPSDP
Ga0318528_100540381	3300031561	Soil	MSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQE
Ga0318528_102521621	3300031561	Soil	FWNNPADDAVGDQYRAKKIASAEAARAARLAGHESLFRRLVERLRPHRQEPRGDPQSNYGTSDDPGR
Ga0318528_107147382	3300031561	Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARSAGHKSLFQRLLERLRPPRQNPGGDSQSNYGTSDDPGH
Ga0318573_103559862	3300031564	Soil	MSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSLGS
Ga0310915_104707611	3300031573	Soil	MTFGNNPADSKEWRLQQAAAEREVERAARLAGHKSLLRRVLERLRPHRQEPGGDPQSNYGTSDDPGH
Ga0318572_101173471	3300031681	Soil	MSFGSNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSLGSYGTRGP
Ga0318572_106183701	3300031681	Soil	MSMGDSPADRAIGKQQVERLMAKADADRAARLAGHKSLFRRLLERLGPHGRQPVSDSKPRPSDP
Ga0318493_101751982	3300031723	Soil	MSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSLGSYGT
Ga0318493_107846632	3300031723	Soil	MSFGNNPADSAAGKQNSERFMAKANADRAARLAGHKPLFQRLLERLRPHRQDPGGDPQSNYGTSDDPGLTS
Ga0318494_107237831	3300031751	Soil	FGNNPADSAAGEQHSERFMAKADADRAARLAGRKSFFQRLLARLRPERQEQGGDSQSNYGTSDDPGR
Ga0318494_108591131	3300031751	Soil	MSFWNNPADDAVGDQYRAKKIASAEAARAARLAGHESLFRRLVERLRPHRQEPRGDPQSNYGTSDDPGR
Ga0318509_103691322	3300031768	Soil	MSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGS
Ga0318552_105064131	3300031782	Soil	SFGNNPADSAAGKQHSERFMAKADADRAARSAGHKSLFQRLLERLRPPRQNPGGDSQSNYGTSDDPGH
Ga0318497_105305322	3300031805	Soil	MTLGGRQMSFGNNPADSAAGKQHSERFMAKADADRAARSAGHKSLFQRLLERLRPPRQNP
Ga0310917_103597522	3300031833	Soil	AMSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSLGSYGTRGP
Ga0306919_104407341	3300031879	Soil	MSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSL
Ga0318551_106346891	3300031896	Soil	MSFGNSPADRGVGNADLDRLRAMAEAARAARLAGHKSLFRRLAERLRPHRQEPGGDPQGNYGTSDDPGR
Ga0306921_108285972	3300031912	Soil	MSFWNNPADDAVGEQYRAKKIASAEAARAARLAGHESLFRRLVERLRPHRQEPRGDPQSNYGTSDDPGR
Ga0310913_112203331	3300031945	Soil	MSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDS
Ga0306922_120725701	3300032001	Soil	GGRAMSFWNNPADDAVGEQYRAKKIASAEAARAARLAGHESLFRRLVERLRPHRQEPRGDPQSNYGTSDDPGR
Ga0310911_103181851	3300032035	Soil	MSMGDSPADRAIGKQVERLMAKADADRAARLAGHKSLFRRLLERLGPHGRQPVS
Ga0318504_102487952	3300032063	Soil	DAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSLGSYGTRGP
Ga0307471_1041676701	3300032180	Hardwood Forest Soil	MSMGNSPAERAIIKQQSERLMAKADADRAADLAGHKSLFRRLLERLRPHRQQPISDSEPQPSDP
Ga0306920_1003154691	3300032261	Soil	MSFWNNPADDAVGEQYRAKKIASAEAARAARLAGHKSLFRRLVERLRPHRQEPRGDPQSNYGTSDDPGR
Ga0335079_108404923	3300032783	Soil	MSFGNNPADSAAGKQHSERFMAKADADRAARLAGHKSPFRRLLERLRPHRQEPGGDPHSP
Ga0335079_121625611	3300032783	Soil	ERAIGKQHSEQLMAKADTDRAARLAGHKSLFRRLLERLRPHRQQPISDSEPQPSDP
Ga0335080_105492903	3300032828	Soil	MSFGNNPADSAAGKQNSERFMANADAARAARLAGRRSLFQRLLERLRPHRQDLGGDPQSNYGTSGDPGR
Ga0335077_102704651	3300033158	Soil	AAGKQNSERFMANADAARAARLAGRRSLFQRLLERLRPHRQDLGGDPQSNYGTSGDPGR
Ga0318519_101573402	3300033290	Soil	MSFGNNPAEDAAGKQYRDQRMAQADAERAARLAGRKSLFRRLLERLRPHRQEPGSDSLGSYGTRGRKSPRSHS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071492

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences