Metagenome Family F071494

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071494
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	60 residues
Representative Sequence	GVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Number of Associated Samples	81
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.10 %
% of genes near scaffold ends (potentially truncated)	90.98 %
% of genes from short scaffolds (< 2000 bps)	91.80 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.738 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (54.098 % of family members)
Environment Ontology (ENVO)	Unclassified (68.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.180 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.69% β-sheet: 31.03% Coil/Unstructured: 48.28%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF03446	NAD_binding_2	11.48
PF13191	AAA_16	2.46
PF04392	ABC_sub_bind	2.46
PF04508	Pox_A_type_inc	2.46
PF03466	LysR_substrate	1.64
PF00536	SAM_1	1.64
PF00496	SBP_bac_5	0.82
PF04909	Amidohydro_2	0.82
PF03237	Terminase_6N	0.82
PF01722	BolA	0.82
PF02630	SCO1-SenC	0.82
PF00383	dCMP_cyt_deam_1	0.82
PF13817	DDE_Tnp_IS66_C	0.82
PF01738	DLH	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1196	Chromosome segregation ATPase Smc	Cell cycle control, cell division, chromosome partitioning [D]	2.46
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.46
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
All Organisms	root	All Organisms	44.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
cellular organisms	root	All Organisms → cellular organisms	44.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.51 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.41 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.02 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.10 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.38 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.82 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.38 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	3.28 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	6.56 %
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	2.46 %
Lewinellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae	0.82 %
Magnetospirillum molischianum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum molischianum	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	6.56 %
Magnetospirillum sp. XM-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. XM-1	2.46 %
Lewinella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Lewinella	0.82 %
Magnetospirillum molischianum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum molischianum	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	6.56 %
Magnetospirillum sp. XM-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. XM-1	2.46 %
unclassified Lewinella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Lewinella → unclassified Lewinella	0.82 %
Magnetospirillum molischianum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum molischianum	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.74 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	6.56 %
Magnetospirillum sp. XM-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. XM-1	2.46 %
Lewinella sp. W8	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Lewinella → unclassified Lewinella → Lewinella sp. W8	0.82 %
Magnetospirillum molischianum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum molischianum	0.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01B1VU1	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. XM-1	519	Open in IMG/M
3300005554\|Ga0066661_10619330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300005764\|Ga0066903_100759146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1724	Open in IMG/M
3300005764\|Ga0066903_106473809	Not Available	610	Open in IMG/M
3300005764\|Ga0066903_107949596	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005764\|Ga0066903_108279683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum molischianum	532	Open in IMG/M
3300006028\|Ga0070717_11195204	Not Available	692	Open in IMG/M
3300006175\|Ga0070712_100448763	Not Available	1073	Open in IMG/M
3300006175\|Ga0070712_100924876	Not Available	752	Open in IMG/M
3300006804\|Ga0079221_10412055	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300006893\|Ga0073928_10623227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	760	Open in IMG/M
3300009012\|Ga0066710_101370543	Not Available	1097	Open in IMG/M
3300010048\|Ga0126373_12428980	Not Available	584	Open in IMG/M
3300010361\|Ga0126378_10943964	Not Available	968	Open in IMG/M
3300010361\|Ga0126378_12396541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	603	Open in IMG/M
3300010366\|Ga0126379_13369863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	535	Open in IMG/M
3300010376\|Ga0126381_104065866	Not Available	569	Open in IMG/M
3300010398\|Ga0126383_12130445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300012206\|Ga0137380_10653616	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300013306\|Ga0163162_12020771	Not Available	661	Open in IMG/M
3300016270\|Ga0182036_10395803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1075	Open in IMG/M
3300016270\|Ga0182036_10424425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1041	Open in IMG/M
3300016270\|Ga0182036_11796605	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300016270\|Ga0182036_11844602	Not Available	512	Open in IMG/M
3300016294\|Ga0182041_11333539	Not Available	657	Open in IMG/M
3300016294\|Ga0182041_11409129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. XM-1	640	Open in IMG/M
3300016294\|Ga0182041_12056578	Not Available	532	Open in IMG/M
3300016319\|Ga0182033_10126885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1930	Open in IMG/M
3300016341\|Ga0182035_12127590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	509	Open in IMG/M
3300016357\|Ga0182032_11663287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	556	Open in IMG/M
3300016357\|Ga0182032_11692929	Not Available	551	Open in IMG/M
3300016371\|Ga0182034_11563563	Not Available	579	Open in IMG/M
3300016387\|Ga0182040_10125251	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300016445\|Ga0182038_11316088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300018482\|Ga0066669_11928001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	551	Open in IMG/M
3300020580\|Ga0210403_10007863	All Organisms → cellular organisms → Bacteria → Proteobacteria	8815	Open in IMG/M
3300020580\|Ga0210403_10608941	Not Available	881	Open in IMG/M
3300020583\|Ga0210401_10112960	All Organisms → cellular organisms → Bacteria → Proteobacteria	2549	Open in IMG/M
3300020583\|Ga0210401_11538870	Not Available	522	Open in IMG/M
3300020583\|Ga0210401_11631986	Not Available	502	Open in IMG/M
3300021170\|Ga0210400_10519670	Not Available	982	Open in IMG/M
3300021171\|Ga0210405_10140101	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300021406\|Ga0210386_11206191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. XM-1	640	Open in IMG/M
3300021432\|Ga0210384_11093369	Not Available	700	Open in IMG/M
3300021479\|Ga0210410_10797193	Not Available	829	Open in IMG/M
3300021559\|Ga0210409_10951009	Not Available	733	Open in IMG/M
3300021559\|Ga0210409_11455912	Not Available	561	Open in IMG/M
3300021560\|Ga0126371_12041365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300021560\|Ga0126371_12060827	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300021560\|Ga0126371_12871395	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300025915\|Ga0207693_10467777	Not Available	985	Open in IMG/M
3300025939\|Ga0207665_11271870	Not Available	587	Open in IMG/M
3300031543\|Ga0318516_10708002	Not Available	571	Open in IMG/M
3300031544\|Ga0318534_10573241	Not Available	642	Open in IMG/M
3300031545\|Ga0318541_10533764	Not Available	656	Open in IMG/M
3300031564\|Ga0318573_10590084	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031572\|Ga0318515_10099412	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300031572\|Ga0318515_10123145	Not Available	1371	Open in IMG/M
3300031573\|Ga0310915_10102553	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300031573\|Ga0310915_10129114	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300031573\|Ga0310915_11119682	Not Available	546	Open in IMG/M
3300031573\|Ga0310915_11245646	Not Available	513	Open in IMG/M
3300031668\|Ga0318542_10613135	Not Available	568	Open in IMG/M
3300031679\|Ga0318561_10009868	Not Available	4119	Open in IMG/M
3300031679\|Ga0318561_10764086	Not Available	531	Open in IMG/M
3300031681\|Ga0318572_10218600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300031681\|Ga0318572_10782571	Not Available	567	Open in IMG/M
3300031713\|Ga0318496_10705422	Not Available	556	Open in IMG/M
3300031713\|Ga0318496_10844591	Not Available	504	Open in IMG/M
3300031719\|Ga0306917_10631272	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300031719\|Ga0306917_11068807	Not Available	629	Open in IMG/M
3300031724\|Ga0318500_10234409	Not Available	886	Open in IMG/M
3300031744\|Ga0306918_11045746	Not Available	633	Open in IMG/M
3300031751\|Ga0318494_10622403	Not Available	631	Open in IMG/M
3300031764\|Ga0318535_10450002	Not Available	573	Open in IMG/M
3300031777\|Ga0318543_10003305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5021	Open in IMG/M
3300031780\|Ga0318508_1224004	Not Available	540	Open in IMG/M
3300031781\|Ga0318547_10513743	Not Available	740	Open in IMG/M
3300031796\|Ga0318576_10225663	Not Available	882	Open in IMG/M
3300031796\|Ga0318576_10641364	Not Available	500	Open in IMG/M
3300031798\|Ga0318523_10519830	Not Available	588	Open in IMG/M
3300031846\|Ga0318512_10482874	Not Available	627	Open in IMG/M
3300031860\|Ga0318495_10190386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	924	Open in IMG/M
3300031879\|Ga0306919_10136100	All Organisms → cellular organisms → Bacteria	1776	Open in IMG/M
3300031879\|Ga0306919_11006839	Not Available	637	Open in IMG/M
3300031879\|Ga0306919_11536192	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031880\|Ga0318544_10038170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1698	Open in IMG/M
3300031910\|Ga0306923_10711046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	1117	Open in IMG/M
3300031910\|Ga0306923_12248285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	545	Open in IMG/M
3300031912\|Ga0306921_10072626	All Organisms → cellular organisms → Bacteria	3951	Open in IMG/M
3300031912\|Ga0306921_10138392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2843	Open in IMG/M
3300031912\|Ga0306921_11893478	Not Available	638	Open in IMG/M
3300031941\|Ga0310912_10671752	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031941\|Ga0310912_10901566	Not Available	680	Open in IMG/M
3300031941\|Ga0310912_11147198	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Lewinella → unclassified Lewinella → Lewinella sp. W8	593	Open in IMG/M
3300031945\|Ga0310913_10052325	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300031945\|Ga0310913_11023338	Not Available	578	Open in IMG/M
3300031946\|Ga0310910_10501587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300031946\|Ga0310910_10769418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300031947\|Ga0310909_10036369	All Organisms → cellular organisms → Bacteria → Proteobacteria	3692	Open in IMG/M
3300031947\|Ga0310909_10585867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	932	Open in IMG/M
3300031954\|Ga0306926_10068023	Not Available	4304	Open in IMG/M
3300032001\|Ga0306922_11019076	Not Available	853	Open in IMG/M
3300032001\|Ga0306922_11056299	Not Available	835	Open in IMG/M
3300032039\|Ga0318559_10553596	Not Available	536	Open in IMG/M
3300032043\|Ga0318556_10019422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3018	Open in IMG/M
3300032044\|Ga0318558_10686048	Not Available	512	Open in IMG/M
3300032051\|Ga0318532_10330110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	541	Open in IMG/M
3300032052\|Ga0318506_10520090	Not Available	527	Open in IMG/M
3300032054\|Ga0318570_10541826	Not Available	531	Open in IMG/M
3300032063\|Ga0318504_10477201	Not Available	597	Open in IMG/M
3300032063\|Ga0318504_10479436	Not Available	595	Open in IMG/M
3300032063\|Ga0318504_10544683	Not Available	556	Open in IMG/M
3300032064\|Ga0318510_10213267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300032066\|Ga0318514_10662293	Not Available	555	Open in IMG/M
3300032068\|Ga0318553_10623148	Not Available	565	Open in IMG/M
3300032076\|Ga0306924_10423947	Not Available	1522	Open in IMG/M
3300032076\|Ga0306924_11781876	Not Available	642	Open in IMG/M
3300032090\|Ga0318518_10494553	Not Available	626	Open in IMG/M
3300032094\|Ga0318540_10338088	Not Available	727	Open in IMG/M
3300033289\|Ga0310914_11227765	Not Available	651	Open in IMG/M
3300033289\|Ga0310914_11458641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.36%
Aquatic	Environmental → Aquatic	0.82%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.98%
Loam	Environmental → Terrestrial → Soil → Loam	7.38%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	78.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.46%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	54.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_3768200	2040502001	Soil	DRRKGPLSGNAEPLARAAGPLGVVFYKVPGPTPDEYTSAHNAIMTLVGPEGCIATRFSSNALVDDFARALRQ
Ga0066661_106193302	3300005554	Soil	LASSFYKVPGPTPDEYTFAHSAIVTLVGPEGGIVTRFSSDAMVDDLARALRRLIDPAGS*
Ga0066903_1007591462	3300005764	Tropical Forest Soil	VPGPTPDEYTFAHNAIMTLVGPDGSILTRLSSDALVDDFARALRRLIDLAGS*
Ga0066903_1064738092	3300005764	Tropical Forest Soil	VPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS*
Ga0066903_1079495961	3300005764	Tropical Forest Soil	GVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSNEAVVDDLARALRQLIDPAGS*
Ga0066903_1082796831	3300005764	Tropical Forest Soil	KVPGPAPDEYTFAHNGIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS*
Ga0070717_111952043	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QLARAAGSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPASS*
Ga0070712_1004487631	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EQLARAAGSLGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIL*
Ga0070712_1009248761	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LARAAGSLGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPASS*
Ga0079221_104120553	3300006804	Agricultural Soil	KVPGPTPDEYTFAHSAIVTLVGPEGGIVTRFSSDGLVDALPRALRRLIDPAGF*
Ga0073928_106232271	3300006893	Iron-Sulfur Acid Spring	LGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVFDDLARALRRLIDPASS*
Ga0066710_1013705432	3300009012	Grasslands Soil	SGNAGQLARAAGSFGVVFYKVPGPTPDEYSFAYNAIVTLVGPEGGIVTRFSNDAVVDDLARTLRRLIDPAGS
Ga0126373_124289802	3300010048	Tropical Forest Soil	AAGSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS*
Ga0126378_109439642	3300010361	Tropical Forest Soil	PGPTPDEYTFAHNAIVTLIGPEGGIVTRFSSDAVVDDLTRALRRLIDPAGS*
Ga0126378_123965412	3300010361	Tropical Forest Soil	CGIVFYKVPGPTPDDYTFAHNAILTLVGPEGGIVTRFSSDASADDLAGALRRLVDSGAS*
Ga0126379_133698631	3300010366	Tropical Forest Soil	PLSGNAEQLARAAASVGVVFYKVPGPTPDEYSFAHNAIVTLVGPEGGIVTRFSSDVAVDDLAGALRRLIDPAGS*
Ga0126381_1040658662	3300010376	Tropical Forest Soil	VFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS*
Ga0126383_121304452	3300010398	Tropical Forest Soil	GVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDVAVDDLAGALRRLIDPAGS*
Ga0137380_106536161	3300012206	Vadose Zone Soil	GPAQLTRAANACGFVFYKVPGAAPDDYTFAHNAVLTLVGPEGGIVSRFASDAAAADLARTLRRLIEPTGS*
Ga0163162_120207711	3300013306	Switchgrass Rhizosphere	ELTRAANACGSVFYKVSGAASDDYTFAHNAVLTLVGPEGGIVSRFASDAAAADLARTLRRLIQPTGS*
Ga0182036_103958033	3300016270	Soil	EQLARAAASIGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0182036_104244251	3300016270	Soil	FGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0182036_117966051	3300016270	Soil	NAEQLARAAASVGVVFYKVPGPTPDEYTFAHNVVTLVGPEGGIVTRFSSDAMVDDLARALRRLIDPAGS
Ga0182036_118446022	3300016270	Soil	TPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0182041_113335391	3300016294	Soil	GPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0182041_114091291	3300016294	Soil	PLSGNAEQLARAAGSIGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPGGS
Ga0182041_120565781	3300016294	Soil	LAGSLGVVFYKVPGRTPDEYTFAHNAILTLVGPEGGIVTRFSSDAAADDLARALRRLIDPASS
Ga0182033_101268854	3300016319	Soil	ILPLSGNAEQLVRAAGSIGVVFYKVPGPTSDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0182035_121275901	3300016341	Soil	GVVFYKVPGPTPDEYTFAHNAVVTLVGPEGGIVTRFSSDVVVDDLARALRRLIDPAGS
Ga0182032_116632872	3300016357	Soil	SGNVEQLARAAASAGVVFYKVPGPTPDEYTFAHNAVVTLVGPEGGIVTRFSSDVVVDDLARALRRLIDPAGS
Ga0182032_116929291	3300016357	Soil	RAAGSIGVVFYKVPGKTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0182034_115635631	3300016371	Soil	AAGSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0182040_101252511	3300016387	Soil	SGNAEQLALAGSLGVVFYKVPGRTPDEYTFAHNAILTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0182038_113160881	3300016445	Soil	VVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVHDLARTLRRLIDPAGS
Ga0066669_119280012	3300018482	Grasslands Soil	AEQLARAAGSFGVVFYKVPGPTPDEYSFAYNAIVTLVGPEGGIVTRFSNDAVVDDLARTLRRLIDPAGS
Ga0210403_100078631	3300020580	Soil	PGSTPDEYTFAHNAIVTLVGPEGGIVTRFSSNSAVDDVARALRRLIDPAGS
Ga0210403_106089412	3300020580	Soil	FYKVPAPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPASS
Ga0210401_101129603	3300020583	Soil	VPGPTPDEYTFANNAIVTLVGPEGGIVTRFSSDTAVDDLARALRRLIDPAGS
Ga0210401_115388701	3300020583	Soil	AAGSLGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPASS
Ga0210401_116319861	3300020583	Soil	AAGSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPAGS
Ga0210400_105196701	3300021170	Soil	GVFFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPASS
Ga0210405_101401014	3300021171	Soil	VFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPASS
Ga0210386_112061911	3300021406	Soil	LPLSGNAEQLARAAGSLGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVNDLARALRRLIDPAGS
Ga0210384_110933691	3300021432	Soil	YKVPAPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPASS
Ga0210410_107971932	3300021479	Soil	GRLFYKVPAPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPASS
Ga0210409_109510091	3300021559	Soil	SLGVVFYKVPAPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPASS
Ga0210409_114559121	3300021559	Soil	AAGSLGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVNDLARALRRLIDPAGS
Ga0126371_120413651	3300021560	Tropical Forest Soil	KVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0126371_120608271	3300021560	Tropical Forest Soil	GPTPDEYTFAHNAIVTLIGPEGGIVTRFSSDTVIDDLARALRRLIDPAGS
Ga0126371_128713951	3300021560	Tropical Forest Soil	AGMLEQLARAAGSLGVVFYKVPGPTPDEYTFAHNAIMTLVGPDGSILTRLSSDALVDDFARALRRLIDLAGS
Ga0207693_104677771	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LARAAGSLGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARTLRRLIDPASS
Ga0207665_112718701	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LARAAGSLGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPASS
Ga0318516_107080022	3300031543	Soil	IGVVFYKVPGKTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318534_105732412	3300031544	Soil	FYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318541_105337642	3300031545	Soil	IGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318573_105900842	3300031564	Soil	VPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318515_100994121	3300031572	Soil	KVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318515_101231451	3300031572	Soil	ASFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIAPAG
Ga0310915_101025531	3300031573	Soil	GSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAG
Ga0310915_101291143	3300031573	Soil	VVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0310915_111196821	3300031573	Soil	SRRRAPRWRCRRSVPGPTPDENSFVHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRRIDPAGS
Ga0310915_112456461	3300031573	Soil	PTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318542_106131351	3300031668	Soil	PSTRCPAPTPDEYTFAHNAVVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0318561_100098681	3300031679	Soil	RAAGFFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0318561_107640861	3300031679	Soil	VPGPAPGEYTFAHNTIVTLVGPEGGIVTRFSSDVGVDDLARALRRLIDPAGC
Ga0318572_102186001	3300031681	Soil	ASSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0318572_107825712	3300031681	Soil	GVVFYKVPGKTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318496_107054222	3300031713	Soil	YKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318496_108445912	3300031713	Soil	GVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0306917_106312722	3300031719	Soil	LAASSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0306917_110688071	3300031719	Soil	VPGPAPGEYTFAHNTIVTLVGPEGGIVTRFSSDVGVDDLARALRRLIDPAGS
Ga0318500_102344093	3300031724	Soil	YKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0306918_110457463	3300031744	Soil	FGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVHDLARALRRLIDPAGS
Ga0318494_106224031	3300031751	Soil	VTMPPSGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318535_104500022	3300031764	Soil	LVRAAGSIGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318543_100033051	3300031777	Soil	LSGNAEQLARAAGSIGVVFYKVPGKTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318508_12240041	3300031780	Soil	RSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAG
Ga0318547_105137431	3300031781	Soil	QLALAAGSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0318576_102256632	3300031796	Soil	AAGSIGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318576_106413642	3300031796	Soil	PAPGEYTFAHNTIVTLVGPEGGIVTRFSSDVGVDDLARALRRLIDPAGS
Ga0318523_105198301	3300031798	Soil	YKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIAPAGS
Ga0318512_104828742	3300031846	Soil	PTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318495_101903862	3300031860	Soil	PGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPGGS
Ga0306919_101361001	3300031879	Soil	GPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0306919_110068392	3300031879	Soil	AEQLARAAGSFGVAFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDNLARALRRLIDPTGS
Ga0306919_115361921	3300031879	Soil	SVGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARALRRLIDPAGS
Ga0318544_100381704	3300031880	Soil	VFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0306923_107110462	3300031910	Soil	VPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIAPAGS
Ga0306923_122482852	3300031910	Soil	VVFYKVPGPTPDEYTFAHNAVVTLVGPEGGIVTRFSSDVVVDDLARALRRLIDPAGS
Ga0306921_100726269	3300031912	Soil	GSIGVVFYKMSGPTPDEYTFAHNAIVTLIGPEGGIVTRFSSDAAVDDLARALRRLIDPAG
Ga0306921_101383921	3300031912	Soil	GNAEQLARAAGFFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0306921_118934781	3300031912	Soil	RRSVPGPTPDENSFVHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRRIDPAGS
Ga0310912_106717521	3300031941	Soil	TPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0310912_109015661	3300031941	Soil	KMSGPTPDEYTFAHNAIVTLIGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0310912_111471982	3300031941	Soil	LAAASVGVVFYKVSGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLAQALRRLIDPAGS
Ga0310913_100523252	3300031945	Soil	GVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0310913_110233381	3300031945	Soil	GVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0310910_105015871	3300031946	Soil	NAEQLARAAASVGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGA
Ga0310910_107694182	3300031946	Soil	VFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0310909_100363692	3300031947	Soil	VPGPTPDENSFVHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRRIDPAGS
Ga0310909_105858671	3300031947	Soil	YKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPGGS
Ga0306926_100680231	3300031954	Soil	ARAAGSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0306922_110190761	3300032001	Soil	FYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDGAVDDLARALRRLIAPAGS
Ga0306922_110562992	3300032001	Soil	DARILPLCGNAEQLALAAASVGVVFYKVSGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLAQALRRLIDPAGS
Ga0318559_105535962	3300032039	Soil	SAEQLARAAASVGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318556_100194222	3300032043	Soil	PGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0318558_106860481	3300032044	Soil	PTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVEDLARVLRRLIDPARS
Ga0318532_103301101	3300032051	Soil	LASPSTRCPAPTPDEYTFAHNAVVTLVGPEGGIVTRFSSDVVVDDLARALRRLIDPAGS
Ga0318506_105200902	3300032052	Soil	YKVPGKTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318570_105418261	3300032054	Soil	YKVPGPTTDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0318504_104772012	3300032063	Soil	YKMSGPTPDEYTFAHNAIVTLIGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318504_104794361	3300032063	Soil	AEQLALAARSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPGGS
Ga0318504_105446831	3300032063	Soil	AGSIGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAADDLARALRRLIDPAGS
Ga0318510_102132672	3300032064	Soil	VGVVFYKVPGPTPDEYTFAHNAVVTLVGPEGGIVTRFSSDVVVDDLARALRRLIDPAGS
Ga0318514_106622931	3300032066	Soil	VFYKVPGKTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0318553_106231481	3300032068	Soil	PLSGNAEQLARAAASVGVVFYKVPGPTPDEYTFAHNAIMTLIGPEGGIVTRFSSDAVVDDLARALRRLIAPAGS
Ga0306924_104239473	3300032076	Soil	LASPSTRCPAPTPDEYTFAHNAVVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0306924_117818761	3300032076	Soil	NAEQLARAAGSFGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAMVDDLARTLRRLIDPAGF
Ga0318518_104945531	3300032090	Soil	FGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVDDLARALRRLIDPAGS
Ga0318540_103380881	3300032094	Soil	QLAQAAASVGVVFYKVPGPTPDEYTFAHNVVTLVGPEGGIVTRFSSDAMVDDLARALRRLIDPAGS
Ga0310914_112277651	3300033289	Soil	AAGSIGVVFYKMSGPTPDEYTFAHNAIVTLIGPEGGIVTRFSSDAAVDDLARALRRLIDPAGS
Ga0310914_114586411	3300033289	Soil	RAAASVGVVFYKVPGPTPDEYTFAHNAIVTLVGPEGGIVTRFSSDAVVEDLARVLRRLIDPARS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071494

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences