NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F071520

Metagenome / Metatranscriptome Family F071520

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F071520
Family Type Metagenome / Metatranscriptome
Number of Sequences 122
Average Sequence Length 75 residues
Representative Sequence LHAEVAGALSMSSDQLVGMDGQEPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Number of Associated Samples 107
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.10 %
% of genes near scaffold ends (potentially truncated) 91.80 %
% of genes from short scaffolds (< 2000 bps) 93.44 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (86.066 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.770 % of family members)
Environment Ontology (ENVO) Unclassified
(22.951 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 31.31%    Coil/Unstructured: 68.69%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF09948DUF2182 68.03
PF07040DUF1326 4.10
PF03861ANTAR 0.82
PF02720DUF222 0.82
PF03860DUF326 0.82
PF00557Peptidase_M24 0.82
PF13185GAF_2 0.82
PF06463Mob_synth_C 0.82
PF13649Methyltransf_25 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG5588Uncharacterized conserved protein, DUF1326 domainFunction unknown [S] 4.10
COG2896GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)Coenzyme transport and metabolism [H] 0.82
COG3707Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domainsTranscription [K] 0.82

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.07 %
UnclassifiedrootN/A13.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559006|FI_contig20720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora692Open in IMG/M
3300001403|JGI20205J14842_1013101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora978Open in IMG/M
3300005341|Ga0070691_10904289Not Available545Open in IMG/M
3300005435|Ga0070714_101950643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300005436|Ga0070713_100783652All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300005444|Ga0070694_101687513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia539Open in IMG/M
3300005451|Ga0066681_10795987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia571Open in IMG/M
3300005538|Ga0070731_10279239All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300005541|Ga0070733_11230763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia501Open in IMG/M
3300005576|Ga0066708_10267711All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300005614|Ga0068856_101336715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora732Open in IMG/M
3300005952|Ga0080026_10001272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6164Open in IMG/M
3300005952|Ga0080026_10264847Not Available521Open in IMG/M
3300005994|Ga0066789_10096518All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300006028|Ga0070717_10502715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora1095Open in IMG/M
3300006174|Ga0075014_100474717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia696Open in IMG/M
3300006176|Ga0070765_102250732Not Available508Open in IMG/M
3300006796|Ga0066665_11694649Not Available501Open in IMG/M
3300006806|Ga0079220_10384109All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300006806|Ga0079220_11217362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia623Open in IMG/M
3300006871|Ga0075434_100584933All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300006871|Ga0075434_102646541All Organisms → cellular organisms → Bacteria → Terrabacteria group502Open in IMG/M
3300006914|Ga0075436_101381649All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300009088|Ga0099830_11047439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria676Open in IMG/M
3300009698|Ga0116216_10091879All Organisms → cellular organisms → Bacteria1868Open in IMG/M
3300010046|Ga0126384_11858284Not Available573Open in IMG/M
3300010154|Ga0127503_10362509All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300010333|Ga0134080_10656490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia516Open in IMG/M
3300010358|Ga0126370_10283976All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300010358|Ga0126370_10631187All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300010358|Ga0126370_11335278Not Available674Open in IMG/M
3300010358|Ga0126370_11705169Not Available606Open in IMG/M
3300010359|Ga0126376_10127914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1995Open in IMG/M
3300010359|Ga0126376_11080383All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300010360|Ga0126372_11924956Not Available637Open in IMG/M
3300010361|Ga0126378_10046565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4014Open in IMG/M
3300010361|Ga0126378_11321490All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300010376|Ga0126381_104840999Not Available517Open in IMG/M
3300010876|Ga0126361_11168990All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300011270|Ga0137391_10292103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1407Open in IMG/M
3300012019|Ga0120139_1111852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora692Open in IMG/M
3300012198|Ga0137364_11359886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia527Open in IMG/M
3300012209|Ga0137379_10150970All Organisms → cellular organisms → Bacteria2232Open in IMG/M
3300012211|Ga0137377_11563641Not Available584Open in IMG/M
3300012482|Ga0157318_1002135All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300013307|Ga0157372_12697601All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia570Open in IMG/M
3300014157|Ga0134078_10165475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora880Open in IMG/M
3300014829|Ga0120104_1134604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora506Open in IMG/M
3300015372|Ga0132256_101781828All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300016371|Ga0182034_12046375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300016422|Ga0182039_10670558All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300017821|Ga0187812_1181571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia674Open in IMG/M
3300017942|Ga0187808_10356238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora665Open in IMG/M
3300017946|Ga0187879_10374857All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300017959|Ga0187779_10716966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia677Open in IMG/M
3300018007|Ga0187805_10023064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2726Open in IMG/M
3300018034|Ga0187863_10499107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium681Open in IMG/M
3300018086|Ga0187769_11505882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces blattellae509Open in IMG/M
3300018482|Ga0066669_10926799All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300021180|Ga0210396_10673732All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300021377|Ga0213874_10228597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora679Open in IMG/M
3300021401|Ga0210393_10070777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2752Open in IMG/M
3300021406|Ga0210386_10196476All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300021407|Ga0210383_10861809All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300021478|Ga0210402_10323814All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300021560|Ga0126371_11520601All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300021860|Ga0213851_1319471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora557Open in IMG/M
3300022506|Ga0242648_1072603All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora562Open in IMG/M
3300022528|Ga0242669_1062296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium660Open in IMG/M
3300025604|Ga0207930_1028374All Organisms → cellular organisms → Bacteria1519Open in IMG/M
3300025625|Ga0208219_1073196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora809Open in IMG/M
3300025703|Ga0208357_1121481All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300025898|Ga0207692_10206694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1157Open in IMG/M
3300025906|Ga0207699_10883689Not Available659Open in IMG/M
3300025906|Ga0207699_11462604All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300025915|Ga0207693_11264523Not Available554Open in IMG/M
3300025928|Ga0207700_10039686All Organisms → cellular organisms → Bacteria3430Open in IMG/M
3300026217|Ga0209871_1001154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6127Open in IMG/M
3300026217|Ga0209871_1065126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia699Open in IMG/M
3300026294|Ga0209839_10185840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia672Open in IMG/M
3300026494|Ga0257159_1081358Not Available562Open in IMG/M
3300027042|Ga0207766_1032061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium590Open in IMG/M
3300027158|Ga0208725_1046110Not Available663Open in IMG/M
3300027166|Ga0208729_106056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria706Open in IMG/M
3300027882|Ga0209590_10393441Not Available895Open in IMG/M
3300028879|Ga0302229_10015505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4399Open in IMG/M
3300028879|Ga0302229_10069099All Organisms → cellular organisms → Bacteria1714Open in IMG/M
3300030739|Ga0302311_10206455All Organisms → cellular organisms → Bacteria1484Open in IMG/M
3300031233|Ga0302307_10266836All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300031236|Ga0302324_101195180All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300031546|Ga0318538_10717545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia542Open in IMG/M
3300031549|Ga0318571_10396317Not Available538Open in IMG/M
3300031573|Ga0310915_10979377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia591Open in IMG/M
3300031668|Ga0318542_10656908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia548Open in IMG/M
3300031668|Ga0318542_10734011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia517Open in IMG/M
3300031680|Ga0318574_10487765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces blattellae722Open in IMG/M
3300031681|Ga0318572_10672913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces blattellae616Open in IMG/M
3300031751|Ga0318494_10263915All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300031751|Ga0318494_10488870All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300031753|Ga0307477_10487438All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300031770|Ga0318521_10102258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1579Open in IMG/M
3300031782|Ga0318552_10416766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium685Open in IMG/M
3300031821|Ga0318567_10149841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1290Open in IMG/M
3300031879|Ga0306919_10926561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora667Open in IMG/M
3300031879|Ga0306919_11324632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora545Open in IMG/M
3300031894|Ga0318522_10028378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1874Open in IMG/M
3300031938|Ga0308175_102009775Not Available648Open in IMG/M
3300031945|Ga0310913_10470132All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300031947|Ga0310909_11320754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia579Open in IMG/M
3300031954|Ga0306926_10919263All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300031954|Ga0306926_13016784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia502Open in IMG/M
3300032001|Ga0306922_10288535All Organisms → cellular organisms → Bacteria1763Open in IMG/M
3300032008|Ga0318562_10333216All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300032009|Ga0318563_10728536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia532Open in IMG/M
3300032059|Ga0318533_10937823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium635Open in IMG/M
3300032066|Ga0318514_10775705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia510Open in IMG/M
3300032068|Ga0318553_10098685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1487Open in IMG/M
3300032090|Ga0318518_10706072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia513Open in IMG/M
3300032205|Ga0307472_100112525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1903Open in IMG/M
3300032954|Ga0335083_11413489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300034124|Ga0370483_0210350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora662Open in IMG/M
3300034199|Ga0370514_049910All Organisms → cellular organisms → Bacteria1050Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.84%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.74%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.92%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.10%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.28%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil3.28%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.46%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.46%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.64%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.64%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.64%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.64%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.64%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.64%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.64%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.64%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.64%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.82%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.82%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.82%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.82%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.82%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.82%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.82%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.82%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.82%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.82%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.82%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.82%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.82%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559006Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembledEnvironmentalOpen in IMG/M
3300001403Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012EnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012482Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510Host-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014829Permafrost microbial communities from Nunavut, Canada - A10_35cm_6MEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022506Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025703Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026217Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300027042Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)EnvironmentalOpen in IMG/M
3300027158Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)EnvironmentalOpen in IMG/M
3300027166Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF033 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FI_008540002166559006Grass SoilLGPLIGEVAGVQPAAITFEKSDGSLHAEVSGALSMSSDQLVGMDGQGPAVITNAPFGAVPQPVRQARANDVSYHGHWSADFSGRTVSSLISGTRADR
JGI20205J14842_101310123300001403Arctic Peat SoilPLIGEVAGVAPAAITFEKSDGSLHAEVSGALSMSSGQIVGMDGQEPAVITNAPFGAVPQPIRQAISKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0070691_1090428923300005341Corn, Switchgrass And Miscanthus RhizosphereLGPLIGEVAGVAPATITFEKSNGSLHAEVSGALSMSSDQLVGMDGQAPAVITNAPFGAVQQPVRQGMARDVSYHGHWSADFTGTNSFITDFKYEG*
Ga0070714_10195064323300005435Agricultural SoilEKSNGSLHAEVAGALSMSSDQVVGMNGQDPAVISNPQFGAVPQPVRQARAKDVSYHGHWSVDFSGTNSFVTDFRYEG*
Ga0070713_10078365213300005436Corn, Switchgrass And Miscanthus RhizosphereGALSMSSDQLVGMDGQAPAVITNAPFGAVPQPVRQGTAKDVSYHGHWSADFTGTNSFITDFRYEG*
Ga0070694_10168751323300005444Corn, Switchgrass And Miscanthus RhizosphereLSMSSDQLVGMDGEGPAVITNAPFGAVAQPVRQARSKDVSYHGHWSADFSGTNSFVTDFRYAG*
Ga0066681_1079598723300005451SoilDQLVGMDGQEPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0070731_1027923923300005538Surface SoilGSLHAEVAGALSMSSDQLLGMDGQGPAVIENAPLAAVTQPLRQARAKAVSYHGHWDAEFDGTNSFVTDFRYEG*
Ga0070733_1123076313300005541Surface SoilAITFERTGGSLHAEVAGALSMSSDQLLGMDGQGPAVIENAPLAAVTQPLRQARAKAVSYHGHWNAEFDGTNSFVTDFRYEG*
Ga0066708_1026771113300005576SoilAAITFEKSDGSLHAEVAGALSMSSDQLVGMDGQEPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0068856_10133671523300005614Corn RhizosphereGLGPLIGEVAGVQPAAITFEKSDGSLHAEVAGALSMSSDQLVGMDGEGPAVITNAPFGAVAQPVRQARSKDVSYHGHWSADFSGTNSFVTDFRYAG*
Ga0080026_1000127273300005952Permafrost SoilEVAGALSMSSDQLVGMDGAGPAVITNVPFAAVTQPVRQATAKDVSYHGHWSADFTGTNSFVTDFRYEG*
Ga0080026_1026484713300005952Permafrost SoilGSLHAEVAGALSMSSDQLVGMDGEGPAVIANAPFGAVTQPVRQATAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0066789_1009651823300005994SoilEKSNGSLHAEVAGALSMSSDQLVGMDGEGPAVIANAPFGAVPQPVRQGTSKDVSYHGHWSADFTGTNSFITDFKYAG*
Ga0070717_1050271523300006028Corn, Switchgrass And Miscanthus RhizosphereEVAGVEPATIRFEKSNGSLHAEVTGALSMSSEQVVGMDGQEPAVIANAPFGAVTQPVRQGTSTDVSYHGHWNMDFSGTNSFITDFRYEG*
Ga0075014_10047471723300006174WatershedsGPLIGEVAGVAPAAITFEKSDRSLHAEVAGALSMSSDQLVGMDGQEPGVITNAPLSAVAQPMRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0070765_10225073213300006176SoilDQLVGMDGQDPAVIANAPFGAVPQPVRQARSKDVSYHGHWSAEFSGTNSFVTDFRYEG*
Ga0066665_1169464913300006796SoilLVGMDGEGPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSDTNSFVTDFRYEG*
Ga0079220_1038410923300006806Agricultural SoilVEPATIRFEKSNGSLHAEVAGALSMSSEQVVGMDGQEPAVIANAPFGAVTQPVRQGTSTDVSYHGHWNMNFS*
Ga0079220_1121736213300006806Agricultural SoilDGSLHAEVAGALSMSSEQLVGMDGQEPAVITNAPFGAVPQPVRQARANDVNYHGHWTADFSGTNSFVTDFRYEG*
Ga0075434_10058493323300006871Populus RhizosphereEVSGALSMSSDQLVGMDGQAPAVITNAPFGAVQQPVRQGTARDVSYHGHWSADFTGTNSFITDFRYEG*
Ga0075434_10264654113300006871Populus RhizosphereMARDGSRLDGEGPGVISNAPFGAVPQPVRQATAKNVSYHGHWSSDFSGTNSFVTYFRYEG
Ga0075436_10138164923300006914Populus RhizosphereMARDGSRLDGEGPGVISNAPFGAVPQPVRQATAKNVSYHGHWSSDFSGTNSFVTYFR
Ga0099830_1104743923300009088Vadose Zone SoilVKLGVFAGALSMSSDQLVGMDAGGPAVIENAPFGAVTQPLRQARAKAVAYHGHWKAEFDGTNSLVTDFRYEG*
Ga0116216_1009187913300009698Peatlands SoilQLVGMDGQEPGVITNAPLSAVAQPMRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0126384_1185828423300010046Tropical Forest SoilGEVAGVQPATITFEKSNGSLHAEVAGALSMSSDQLMGMDGQQPAVITNAPFGAVPQPVRQATAKDVSYHGHWSAEFSGTNSFVTDFRYEG*
Ga0127503_1036250923300010154SoilDQLVGMDGEGPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0134080_1065649013300010333Grasslands SoilQLVGMDGEGPAVITNAPFGAVTQPVRQARSKDVSYHGHWSADFSGTNSFVTDFRCEG*
Ga0126370_1028397613300010358Tropical Forest SoilGVSPAAITFEKSDGSLHAEVAGALLMSSDQMVGMDGQGPGVISNAPFGAVPQPVRQATAKDVSYHGHWSVDFSGTNSFVTDFRYEG*
Ga0126370_1063118723300010358Tropical Forest SoilAQVSGAISMSSDQIVGMDGRGPGVIANAPFGTVTQPVRQGTAKDVSYRGHWSAEFSGTNSFITDFRYEA*
Ga0126370_1133527813300010358Tropical Forest SoilEVSDALSMSSDQMVGMDGQSPAVIANAPFGTVTQPVRQARAREGSYHGHWNAEFSGTNSFITDFRYEG*
Ga0126370_1170516923300010358Tropical Forest SoilITFEKANGSLHAEVSGALSMSSDQIVGMDGQAPAVITNAPFGAVPQPVRQGTARDVSYHGHWSADFTGTNSFITDFKYEG*
Ga0126376_1012791413300010359Tropical Forest SoilVAGVQPATITFEKSNGSLHAEVAGALSMSSDQLMGMDGQQPAVITNAPFGAVTQPVRQATAKDVSYHGHWSAEFSGTNSFVTDFRYEG*
Ga0126376_1108038323300010359Tropical Forest SoilALSMSSDQLVGMDGREPAVITNAPFGAVPQPVRQARAKDVSYRGHWSAEFSGTNSFVTDFRYEG*
Ga0126372_1192495623300010360Tropical Forest SoilHAEVSGALSMSSDQVVGMDGQSPAVISNAPFGAVRQGTARDVSYHGHWSADFTGTNSFITDFKYEG*
Ga0126378_1004656513300010361Tropical Forest SoilTFNESDGSLHAQVAGALSMSSDQLVGMDGQGPAVISNASFGVVTQPVRQATAKELSYHGHWTAEFSGTNSFVTDFRYEG*
Ga0126378_1132149013300010361Tropical Forest SoilGLGPLIGEVAGVAPASITFEKSDGSLHAEVAGALSMSSDQLVGMDGQDPSVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0126381_10484099913300010376Tropical Forest SoilGVGPLVGEVVGVGPATITFEKSDGSLHADVAGALSMSSQQVVGMDGQGPAVISNVPFGVVTQPVRQATAKDVSHHGHWSAEFSGTNSFITDFRYEG*
Ga0126361_1116899013300010876Boreal Forest SoilPAAITFEKSDGSLHAEVAGALSMSSDQLVGMDGAGPAVITNVPFAAVTQPVRQATAKDVSYHGHWSADFTGTNSFVTDFHYEG*
Ga0137391_1029210333300011270Vadose Zone SoilVKLGVFAGALSMSSDQLVGMDAEGPAVIENAPFGAVTQPLRQARAKAVAYHGHWKAEFDGTNSLVTDFRYEG*
Ga0120139_111185213300012019PermafrostFEKSDGSLHAEVAGALSMSSDQLVGMDGAGPAVITNAPFGAVTQPVRQATAKDVSYHGHWSADFSGTNSFVTAFSYEG*
Ga0137364_1135988623300012198Vadose Zone SoilMSSDQIAGMDGQEPAVIANAPFGAVTLPVQQGMSKDVSYRGHWQMSFSGTNSFITDFRYAG*
Ga0137379_1015097043300012209Vadose Zone SoilLSMSSDQLVGMDGQEPAVITNAPFGAVPQPVRQATAKDVSYHGHWAADFSGTNSFVTDFRYEG*
Ga0137377_1156364123300012211Vadose Zone SoilANLGPLIGEVVGVSPAAITFEKSDGSLHAEVAGALSMSSDQLVGGDGAGPGVLANLPFGAVTQPVRQGTARDASYHGHWNADFSGTNSFITDFRYEG*
Ga0157318_100213523300012482Arabidopsis RhizosphereLHAEVAGALSMSSDQLVGMDGQEPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0157372_1269760123300013307Corn RhizosphereGALSMSSDQMVGMDGEGPGVISNAPFGAVPQPVRQATAKDVSYHGHWSVDFSGTNSFVTDFRYEG*
Ga0134078_1016547523300014157Grasslands SoilVAGVQPAAITFEKSDGSLHAEVAGALSMSSDQLVGMDGEGPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0120104_113460413300014829PermafrostVDDPALGGVAGVQPAAITFEKSDGSLHAEVSGALSMSSDQLVGMDGQEPAVITNAPFGAVTQPVRQARAKDVSYHGHWSADFSGTNSFVTAFSYEG*
Ga0132256_10178182813300015372Arabidopsis RhizosphereLHAEVAGALSMSSDQMAGMDGQGPSVISNAPFGAVAQPVRQATSKDVSYHGHWSADFSGTNSFVTDFRYEG*
Ga0182034_1204637523300016371SoilITFKKSDKSLHAEVAGVLAMSSEQIVGMDGQGPAVITNVPFAAVTQPVRQGRSDEVSYHGQWSAHLSGTNSFVADFRYEG
Ga0182039_1067055823300016422SoilYLAGLGPLIGEVAGVQPASITFERSDGSLHAEVAGALSMSSDQLVGMDGQEPGVITNAPLGAVAQPMRQARAKDVSYHGHWSADFTGTNSFVTDFRYDG
Ga0187812_118157123300017821Freshwater SedimentGALSMSSDQLVGMDGQEPGVITNAPLSAVAQPMRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0187808_1035623813300017942Freshwater SedimentALITFEKSNGSLHAEVAGALSMSSDPVIGMNGQDPGVITNPPFGAVPQPVRQATSRDVSYHDYWNADFSGTNSFVTDFRYEG
Ga0187879_1037485723300017946PeatlandLTGMDGQAPAVITNAPFGAVTQPVRQGRARDTSYHGYWSADFTGTNSFITDFRYEG
Ga0187779_1071696623300017959Tropical PeatlandEVAGVAPATITFEKAGGSLHAEVAGALSMSSDQLVGMDGQEPGVITNAPLSAVAQPMRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0187805_1002306483300018007Freshwater SedimentLGPLIGEVAGVAPATITFEKSDGSLHAEVTGALSMSSDQLTGMDGEQPAVIANAPFGAVAQPVRQARSKDVSYHGHWSADFSGTNSFVTDFRYDG
Ga0187863_1049910713300018034PeatlandGVQPAAITFEKSDGSLHAEVAGAVSMSSDQLTGMDGQAPAVITNAPFGAVTQPVRQGRARDASYHGYWSADFTGTNSFITDFRYEG
Ga0187769_1150588213300018086Tropical PeatlandRGSLHAEVAGVLSMGSDQLVGMDGQEPGVITNAPLSAVAQPMRQARAKDVSYHGHWSADFTGTNSFVTDFRYEG
Ga0066669_1092679923300018482Grasslands SoilAAITFEKSDGSLHAEVAGALSMSSDRLVGMDGQEPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0210396_1067373213300021180SoilGALSMSSDQLVGMDGHEPAVITNAPFGAVPQPVRQARSKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0213874_1022859723300021377Plant RootsVAGVAPATITFHREGGSLHAEVAGALSMSSDQIAGMDGQEPAVITNAPFGAVAQPVRQARAKDVSYHGHWSADFSGTNSFITDFRYEG
Ga0210393_1007077753300021401SoilAPAAITFEKSDGSLHAEVSGALSMSSDQLMGMDGLEPAVITNAPFGAVTQPVRQARAKDVSYHGYWSADFSGTNSFVTDFRYAG
Ga0210386_1019647643300021406SoilHAEIAGALSMSSDPVVGMDGQVPGVITNAPFGAVTQPVLQARSKDVSYHDHWSADFSGTNSFVTDFRYEG
Ga0210383_1086180913300021407SoilGAVSMSSDQLVGMDGQDPAVIANAPFGAVPQPVRQARSKDVSYHGHWSAEFSGTNSFVTDFRYEG
Ga0210402_1032381423300021478SoilVPIAAVLATHTAPAGPVPAAITFEKADGSLHAEVAGALSMSSDQMVGMDGQGPGVITNAPFGAVPQPVRQATAKDVSYHGYWSADFTGTNSFVTDFRYEG
Ga0126371_1152060123300021560Tropical Forest SoilSMSSDQMVGMDGHGPAVISNTPFGAVTQPVRQGTARDVSYHGYWSADFSGTNSFITDFRYEG
Ga0213851_131947123300021860WatershedsERRRREGGRLVGMDGQGPTVITNAPFGAVTQPVRQARAKDVSYHRHWSADFSGTNSFVTDFRYES
Ga0242648_107260313300022506SoilLGPLIGEVAGVQPAAITFEKSDGSLHAEVAGALSMSSDQLVGMDGEGPAVITNAPFGAVPQPVRQARANDV
Ga0242669_106229613300022528SoilMSSDHLVGMDGQQPGVITNAPFSAVAQPMRQARAQDVSYHGHWSADFSGTNSFVANFRYE
Ga0207930_102837413300025604Arctic Peat SoilAGVSPAAITFEKSDGSLHAEVAGALSMSSDQMVGMDGQGPAVISNAPFGAVPQPVRQATAKDVRYHGHWSVDFSGTNSFVTDFRYEG
Ga0208219_107319613300025625Arctic Peat SoilEVAGVAPAAITFEKSDGSLHAEVSGALSMSSGQIVGMDGQEPAVITNAPFGAVPQPIRQAISKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0208357_112148123300025703Arctic Peat SoilSMSSGQIVGMDGQEPAVITNAPFGAVPQPIRQAISKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0207692_1020669433300025898Corn, Switchgrass And Miscanthus RhizosphereGSLHAEVTGALSMSSEQVVGMDGQEPAVIANAPFGAVTQPVRQGTSTDVSYHGHWNMDFSGTNSFITDFRYEG
Ga0207699_1088368923300025906Corn, Switchgrass And Miscanthus RhizosphereGVAPATITFEKSNGSLHAEVSGALSMSSDQLVGMDGQAPAVITNAPFGAVPQPVRQGTARDVSYHGHWSADFTGTNSFITDFRYEG
Ga0207699_1146260423300025906Corn, Switchgrass And Miscanthus RhizosphereGDQLVGMDGQGPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0207693_1126452313300025915Corn, Switchgrass And Miscanthus RhizosphereSMSSDQMIGMDGQGPGVITNAPFGAVPQPVRQATAKDVSYHGYWSADFTGTNSFVTDFRYEG
Ga0207700_1003968643300025928Corn, Switchgrass And Miscanthus RhizosphereVSGALSMSSDQLVGMDGQAPAVITNAPFGAVPQPVRQGTAKDVSYHGHWSADFTGTNSFITDFRYEG
Ga0209871_100115413300026217Permafrost SoilVGMDGAGPAVITNVPFAAVTQPVRQATAKDVSYHGHWSADFTGTNSFVTDFRYEG
Ga0209871_106512623300026217Permafrost SoilGSLHAEVSGALSMSSDQLVGMDGQGPAVITNAPFGAVPQPVRQGTSKDVSYHGHWSADFTGTNSFITDFKYAG
Ga0209839_1018584013300026294SoilSLHAEVSGALSMSSDQLVGMDGEGPAVIANAPFGAVPQPVRQGTSKDVSYHGHWSADFTGTNSFITDFKYAG
Ga0257159_108135813300026494SoilLHAEVAGAVSMSSDQLVGMDGQEPALITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0207766_103206123300027042Tropical Forest SoilALSMSSDQLVGMDGHDPGVITNAPLSAVAQPMRQARAKEVSYHGHWSADFSGTNSFVTDFRYEG
Ga0208725_104611023300027158Forest SoilPLIGEVAGVAPAAITFEKTGGSLHAEVAGALTMSGGQLVGMDGQGPGVITNAPLSAVAQPMRQARAEDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0208729_10605623300027166Forest SoilVNSRSEASSGLIPMLAVSMSSDQLVGMDGQEPGVITNAPLSAVAQPMRQARAKDVSYHGHWSADFSGTNSFVTDFRYQG
Ga0209590_1039344113300027882Vadose Zone SoilGLGPLIGEVAGVEPATITFEKSNGSLHAEVSGALSMSSDQLVGMDGQGPAVITNVPFGAVTQPVRQATAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0302229_1001550513300028879PalsaLHAEVAGALSMSSDQLVGMDGQEPGVITNAPLSAVAQPMRQARAKDVSYHGHWSADFSGTNSFVTDFRYQG
Ga0302229_1006909913300028879PalsaAGVEPAAITFQKSDGSLHAEVSGAASMSSEQLVGMDGQNPAVITNPPFSAVTQPVGQARAKDVSYHGHWSADFSGTNSFVTNFRYEGG
Ga0302311_1020645513300030739PalsaMSSEQLVGMDGQNPAVITNPPFSAVTQPVGQARAKDVSYHGHWSADFSGTNSFVTNFRYEGG
Ga0302307_1026683613300031233PalsaSITFEKTGGSLHAEVAGALSMSSDQLVGMDGQEPGVITNAPLSAVAQPMRQARAKDVSYHGHWSADFSGTNSFVTDFRYQG
Ga0302324_10119518023300031236PalsaMSSEQLVGMDGEEPAVITNAPFGAVTHPVRQARAIDVSYHGHWSADFSGTNSFVTDFRYE
Ga0318538_1071754523300031546SoilSGVLSMSSEQIVGMDGQEPAVITNVPFSAVTQPIRQGTATDVSYHGHWGADFSGTNSFVTDFRYEG
Ga0318571_1039631723300031549SoilLVGEVVGVGPATITFEKSDGSLHADVAGALSMSSQQVVGMDGQGPAVISNVPFGVVTQPVRQATAKDVSHHGHWSAEFSGTNSFITDFRYEG
Ga0310915_1097937713300031573SoilGEVAGVQPAAITFEKSGRSLHAEVSGVLSMSSEQIVGMDGQEPAVITNVPFSAVTQPIRQGTATDVSYHGHWGADFSGTNSFVTDFRYEG
Ga0318542_1065690813300031668SoilLIGEVAGVAPASITFDKNGGSLHAEVAGALSMSSDQLVGMDGQEPGVITNAPLGAVAQPMRQARAKDVSYHGHWSADFTGTNSFVTDFRYEG
Ga0318542_1073401113300031668SoilMSSDQLVGMDGQDPGVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYE
Ga0318574_1048776523300031680SoilGLGPLIGEVAGVEPAAITFKKSDRSLHAEVAGVLAMSSEQIVGMDGQGPAVITNVPFGAVTQPIRQGRAEDVSYHGHWRADFSGTNSFVTDFRYEG
Ga0318572_1067291323300031681SoilEVAGVLAMSSEQIVGMDGQGPAVITNVPFGAVTQPIRQGRAEDVSYHGHWRADFSGTNSFVTDFRYEG
Ga0318494_1026391523300031751SoilSLHAEVSGVLSMSSEQIVGMDGQEPAVITNVPFSAVTQPIRQGTATDVSYHGHWGADFSGTNSFVTDFRYEG
Ga0318494_1048887013300031751SoilVTGMDGQEPAVIANAPFGAVAQPVRQGRSKDVSYDGHWNVSFSGTNSFITDFRYEG
Ga0307477_1048743813300031753Hardwood Forest SoilFEKADGSLHAEVAGALSMSSDQMVGMDGQGPGVITNAPFGAVPQPVRQATAKDVSYHGYWSADFTGTNSFVTDFRYEG
Ga0318521_1010225833300031770SoilAEVSGVLSMSSEQIVGLDGQEPAVITNVPFGAVTQPIRQGTAEDVSYRGHWSTDFSGTNSFVTDFRYEG
Ga0318552_1041676613300031782SoilIVGMDGQGPAVITNVPFGAVTQPIRQGRAEDVSYHGHWRADFSGTNSFVADFRYEG
Ga0318567_1014984113300031821SoilAGVEPAAITFKKSDRSLHAEVAGVLAMSSEQIVGMDGQGPAVITNVPFGAVTQPIRQGRAEDVSYHGHWRADFSGTNSFVADFRYEG
Ga0306919_1092656123300031879SoilEVSGVLSMSSEQIVGLDGQEPAVITNVPFGAVTQPIRQGTAEDVSYRGHWSTDFSGTNSFVTDFRYEG
Ga0306919_1132463213300031879SoilAGVQPAAITFKKSDRSLHAEVAGVLAMSSEQIVGMDGQGPAVITNVPFGAVTQPIRQGRAEDVSYHGHWRADFSGTNSFVTDFRYEG
Ga0318522_1002837823300031894SoilMSSEQIVGLDGQEPAVITNVPFGAVTQPIRQGTAEDVSYRGHWSTDFSGTNSFVTDFRYE
Ga0308175_10200977513300031938SoilQPAAITFEKSDGSLHAEVAGALSMSSDQLVGMDGQEPAVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0310913_1047013223300031945SoilSEQIVGMDGQEPAVITNVPFSAVTQPIRQGTATDVSYHGHWGADFSGTNSFVTDFRYEG
Ga0310909_1132075413300031947SoilVAGVQPAAITFEKSGRSLHAEVSGVLSMSSEQIVGMDGQEPAVITNVPFSAVTQPIRQGTATDVSYHGHWGADFSGTNSFVTDFRYEG
Ga0306926_1091926323300031954SoilVSGVLSMSAEQIVGGDGREAAVITNAPFAAVTQPIRQATSKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0306926_1301678413300031954SoilSSEQIVGMDGQGPAVITNVPFGAVTQPIRQGRAEDVSYHGHWGADFSGTNSFVTDFRYES
Ga0306922_1028853513300032001SoilAEVSGVLSMSSEQIVGMDGQEPAVITNVPFSAVTQPIRQGTATDVSYHGHWGADFSGTNSFVTDFRYEG
Ga0318562_1033321613300032008SoilFEKSDGSLHAEVAGALSMSSDQLVGMDGQEPGVITNAPFGAVPQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0318563_1072853613300032009SoilVSGVLSMSADQIVGMDGQQAAVITNVPFAAVTQPVRQGRSDEVSYHGHWSADFSGTNSFVTDFRYEG
Ga0318533_1093782313300032059SoilSAEQIVGGDGREAAVITNAPFAAVTQPIRQATSKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0318514_1077570513300032066SoilVSGVLSMSSEQIVGMDGQEPAVITNVPFSAVTQPIRQGTATDVSYHGHWGADFSGTNSFVTDFRYEG
Ga0318553_1009868533300032068SoilVGLDGQEPAVITNVPFGAVTQPIRQGTAEDVSYRGHWSTDFSGTNSFVTDFRYEG
Ga0318518_1070607223300032090SoilSDQVVGMDGQEPGVITNPPFGAVAQPVRQARAKDVSYHGHWSADFSGTNSFVTDFRYEG
Ga0307472_10011252513300032205Hardwood Forest SoilVSGALSMSSDQLVGMDGQEPAVITNAPFVPVPQPVRQARSKDVSYHGHWNAEFSGTNSFVTDFRYEG
Ga0335083_1141348913300032954SoilVAGVEPAPITFESSNGSLRAEVAGKVSMAAQQIVGMDGSNPAVITNPLLGAVAQPVRQARAGDVSYHGHWDVEFSGTNSFVCDFAYSG
Ga0370483_0210350_1_2733300034124Untreated Peat SoilGEVAGVQPAAITFEKSDGSLHAEVAGAVSMSSDQLTGMDGQAPAVITNAPFGAVTQPVRQGRARDASYHGYWSADFTGTNSFITDFRYEG
Ga0370514_049910_1_2373300034199Untreated Peat SoilFEKSDGSLHAEVAGAVSMSSDQLTGMDGQAPAVITNAPFGAVTQPVRQGRARDASYHGYWSADFTGTNSFITDFRYEG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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