Metagenome Family F071543

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071543
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	63 residues
Representative Sequence	MTQRAALEIVWRNPKPPQRRQRWEQIEQDSGTPHYLVQELVSTPAGSFWATTSSLEIVHGGCAA
Number of Associated Samples	80
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.16 %
% of genes near scaffold ends (potentially truncated)	21.31 %
% of genes from short scaffolds (< 2000 bps)	55.74 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.328 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (17.213 % of family members)
Environment Ontology (ENVO)	Unclassified (45.082 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.836 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 29.35% Coil/Unstructured: 70.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02954	HTH_8	41.80
PF08447	PAS_3	14.75
PF13426	PAS_9	3.28
PF13466	STAS_2	2.46
PF07730	HisKA_3	1.64
PF13620	CarboxypepD_reg	1.64
PF02405	MlaE	1.64
PF00106	adh_short	0.82
PF00582	Usp	0.82
PF01321	Creatinase_N	0.82
PF08448	PAS_4	0.82
PF00724	Oxidored_FMN	0.82
PF02321	OEP	0.82
PF01066	CDP-OH_P_transf	0.82
PF07228	SpoIIE	0.82
PF02780	Transketolase_C	0.82
PF16576	HlyD_D23	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.64
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.64
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.64
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.64
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.64
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.64
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	0.82
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.82
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.82
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.82
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.82
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.33 %
Unclassified	root	N/A	19.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.33 %
Unclassified	root	N/A	19.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.33 %
Unclassified	root	N/A	19.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.20 %
Unclassified	root	N/A	19.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.46 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.46 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.46 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.84 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.67 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.64 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.67 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.64 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.67 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.64 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.67 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.64 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100426211	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104403478	Not Available	532	Open in IMG/M
3300000789\|JGI1027J11758_12798023	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300000955\|JGI1027J12803_100282700	Not Available	513	Open in IMG/M
3300000955\|JGI1027J12803_100577258	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300000956\|JGI10216J12902_100316174	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300001867\|JGI12627J18819_10010878	All Organisms → cellular organisms → Bacteria → Acidobacteria	3584	Open in IMG/M
3300004267\|Ga0066396_10025420	All Organisms → cellular organisms → Bacteria → Acidobacteria	829	Open in IMG/M
3300004267\|Ga0066396_10094192	Not Available	545	Open in IMG/M
3300004633\|Ga0066395_11022893	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005293\|Ga0065715_10189611	All Organisms → cellular organisms → Bacteria → Acidobacteria	1423	Open in IMG/M
3300005332\|Ga0066388_100019902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	5822	Open in IMG/M
3300005332\|Ga0066388_100092495	All Organisms → cellular organisms → Bacteria → Acidobacteria	3454	Open in IMG/M
3300005332\|Ga0066388_100096324	All Organisms → cellular organisms → Bacteria	3406	Open in IMG/M
3300005332\|Ga0066388_100213248	Not Available	2557	Open in IMG/M
3300005332\|Ga0066388_100476070	All Organisms → cellular organisms → Bacteria → Acidobacteria	1888	Open in IMG/M
3300005332\|Ga0066388_105455814	Not Available	644	Open in IMG/M
3300005332\|Ga0066388_108648306	Not Available	506	Open in IMG/M
3300005434\|Ga0070709_10309723	All Organisms → cellular organisms → Bacteria → Acidobacteria	1155	Open in IMG/M
3300005437\|Ga0070710_10008762	All Organisms → cellular organisms → Bacteria	4933	Open in IMG/M
3300005439\|Ga0070711_100034750	All Organisms → cellular organisms → Bacteria → Acidobacteria	3364	Open in IMG/M
3300005439\|Ga0070711_101582697	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300005471\|Ga0070698_100513628	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300005591\|Ga0070761_10043911	All Organisms → cellular organisms → Bacteria → Acidobacteria	2511	Open in IMG/M
3300005610\|Ga0070763_10003210	All Organisms → cellular organisms → Bacteria → Acidobacteria	6029	Open in IMG/M
3300005615\|Ga0070702_100126428	All Organisms → cellular organisms → Bacteria → Acidobacteria	1608	Open in IMG/M
3300005617\|Ga0068859_100104664	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300005764\|Ga0066903_100266770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2665	Open in IMG/M
3300005764\|Ga0066903_100292499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2567	Open in IMG/M
3300005764\|Ga0066903_100785504	All Organisms → cellular organisms → Bacteria → Acidobacteria	1699	Open in IMG/M
3300005764\|Ga0066903_102261198	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300005842\|Ga0068858_100139097	All Organisms → cellular organisms → Bacteria → Acidobacteria	2279	Open in IMG/M
3300006173\|Ga0070716_101415882	Not Available	566	Open in IMG/M
3300006175\|Ga0070712_100132731	Not Available	1889	Open in IMG/M
3300006854\|Ga0075425_100019108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	7470	Open in IMG/M
3300006854\|Ga0075425_100123339	All Organisms → cellular organisms → Bacteria → Acidobacteria	2957	Open in IMG/M
3300009792\|Ga0126374_10079820	All Organisms → cellular organisms → Bacteria → Acidobacteria	1785	Open in IMG/M
3300009792\|Ga0126374_10496153	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300009792\|Ga0126374_10534578	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300010046\|Ga0126384_10004424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	8599	Open in IMG/M
3300010047\|Ga0126382_10016705	All Organisms → cellular organisms → Bacteria → Acidobacteria	3708	Open in IMG/M
3300010047\|Ga0126382_10801853	Not Available	803	Open in IMG/M
3300010048\|Ga0126373_10099339	Not Available	2688	Open in IMG/M
3300010048\|Ga0126373_10176107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2055	Open in IMG/M
3300010048\|Ga0126373_12610224	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300010048\|Ga0126373_12774125	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300010358\|Ga0126370_10124630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1833	Open in IMG/M
3300010358\|Ga0126370_11518874	Not Available	637	Open in IMG/M
3300010360\|Ga0126372_10035056	All Organisms → cellular organisms → Bacteria	3209	Open in IMG/M
3300010376\|Ga0126381_102801568	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300010396\|Ga0134126_10108961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3395	Open in IMG/M
3300012948\|Ga0126375_10220175	Not Available	1262	Open in IMG/M
3300012948\|Ga0126375_10482314	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300012971\|Ga0126369_10008968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	7590	Open in IMG/M
3300014657\|Ga0181522_10001193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16253	Open in IMG/M
3300016341\|Ga0182035_10159642	All Organisms → cellular organisms → Bacteria → Acidobacteria	1742	Open in IMG/M
3300016357\|Ga0182032_12026011	Not Available	505	Open in IMG/M
3300016371\|Ga0182034_10669240	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300016445\|Ga0182038_10134429	All Organisms → cellular organisms → Bacteria → Acidobacteria	1861	Open in IMG/M
3300016445\|Ga0182038_10154723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1755	Open in IMG/M
3300017970\|Ga0187783_10002661	All Organisms → cellular organisms → Bacteria → Acidobacteria	13239	Open in IMG/M
3300017970\|Ga0187783_10103278	All Organisms → cellular organisms → Bacteria → Acidobacteria	2102	Open in IMG/M
3300017975\|Ga0187782_10116697	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1971	Open in IMG/M
3300017975\|Ga0187782_11298843	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300020581\|Ga0210399_10061284	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300020582\|Ga0210395_10000379	All Organisms → cellular organisms → Bacteria	35068	Open in IMG/M
3300020583\|Ga0210401_10190195	All Organisms → cellular organisms → Bacteria → Acidobacteria	1910	Open in IMG/M
3300021171\|Ga0210405_10683582	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300021377\|Ga0213874_10036517	All Organisms → cellular organisms → Bacteria → Acidobacteria	1449	Open in IMG/M
3300021407\|Ga0210383_10001146	All Organisms → cellular organisms → Bacteria	24481	Open in IMG/M
3300021433\|Ga0210391_10060997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2992	Open in IMG/M
3300021478\|Ga0210402_10052708	All Organisms → cellular organisms → Bacteria → Acidobacteria	3559	Open in IMG/M
3300021478\|Ga0210402_10228791	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300021478\|Ga0210402_11312872	Not Available	651	Open in IMG/M
3300021560\|Ga0126371_10000469	All Organisms → cellular organisms → Bacteria	33000	Open in IMG/M
3300021560\|Ga0126371_10006354	All Organisms → cellular organisms → Bacteria	10509	Open in IMG/M
3300021560\|Ga0126371_10064271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3549	Open in IMG/M
3300021560\|Ga0126371_10902874	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300025905\|Ga0207685_10144662	All Organisms → cellular organisms → Bacteria → Acidobacteria	1070	Open in IMG/M
3300025914\|Ga0207671_10194309	All Organisms → cellular organisms → Bacteria → Acidobacteria	1583	Open in IMG/M
3300025915\|Ga0207693_10148354	Not Available	1844	Open in IMG/M
3300027502\|Ga0209622_1003578	Not Available	2397	Open in IMG/M
3300027855\|Ga0209693_10308734	Not Available	771	Open in IMG/M
3300028381\|Ga0268264_10177677	All Organisms → cellular organisms → Bacteria → Acidobacteria	1931	Open in IMG/M
3300031573\|Ga0310915_10041010	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300031573\|Ga0310915_10955723	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300031720\|Ga0307469_10357139	Not Available	1229	Open in IMG/M
3300031740\|Ga0307468_100980623	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300031744\|Ga0306918_11176213	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300031744\|Ga0306918_11313375	Not Available	556	Open in IMG/M
3300031753\|Ga0307477_10174152	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300031820\|Ga0307473_10015208	All Organisms → cellular organisms → Bacteria → Acidobacteria	2960	Open in IMG/M
3300031823\|Ga0307478_10405647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1129	Open in IMG/M
3300031910\|Ga0306923_11038363	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300031912\|Ga0306921_10033391	All Organisms → cellular organisms → Bacteria	5762	Open in IMG/M
3300031912\|Ga0306921_10097155	All Organisms → cellular organisms → Bacteria	3410	Open in IMG/M
3300031947\|Ga0310909_10045069	All Organisms → cellular organisms → Bacteria → Acidobacteria	3358	Open in IMG/M
3300031954\|Ga0306926_10498023	Not Available	1497	Open in IMG/M
3300031962\|Ga0307479_10043206	All Organisms → cellular organisms → Bacteria	4327	Open in IMG/M
3300031962\|Ga0307479_10182941	All Organisms → cellular organisms → Bacteria → Acidobacteria	2062	Open in IMG/M
3300032001\|Ga0306922_10226350	All Organisms → cellular organisms → Bacteria → Acidobacteria	2009	Open in IMG/M
3300032001\|Ga0306922_10695927	All Organisms → cellular organisms → Bacteria → Acidobacteria	1070	Open in IMG/M
3300032180\|Ga0307471_100109926	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300032205\|Ga0307472_100078684	Not Available	2183	Open in IMG/M
3300032205\|Ga0307472_100105789	All Organisms → cellular organisms → Bacteria → Acidobacteria	1949	Open in IMG/M
3300032783\|Ga0335079_10046821	All Organisms → cellular organisms → Bacteria	4958	Open in IMG/M
3300032783\|Ga0335079_10383959	All Organisms → cellular organisms → Bacteria → Acidobacteria	1517	Open in IMG/M
3300032783\|Ga0335079_11550815	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300032805\|Ga0335078_10063741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5410	Open in IMG/M
3300032828\|Ga0335080_10014824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8286	Open in IMG/M
3300032892\|Ga0335081_10058773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5973	Open in IMG/M
3300032892\|Ga0335081_10270234	All Organisms → cellular organisms → Bacteria → Acidobacteria	2277	Open in IMG/M
3300032893\|Ga0335069_10067810	All Organisms → cellular organisms → Bacteria	4602	Open in IMG/M
3300032895\|Ga0335074_10258158	All Organisms → cellular organisms → Bacteria → Acidobacteria	2041	Open in IMG/M
3300032896\|Ga0335075_10114758	Not Available	3477	Open in IMG/M
3300032898\|Ga0335072_10142921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2952	Open in IMG/M
3300032898\|Ga0335072_10511650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300032898\|Ga0335072_11110571	Not Available	712	Open in IMG/M
3300032955\|Ga0335076_10002517	All Organisms → cellular organisms → Bacteria	18268	Open in IMG/M
3300032955\|Ga0335076_11649197	Not Available	529	Open in IMG/M
3300033158\|Ga0335077_11056410	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300033290\|Ga0318519_10405968	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.44%
Host-Associated	Host-Associated	6.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.62%
Plants	Host-Associated → Plants	6.56%
Aquatic	Environmental → Aquatic	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.46%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.46%
Loam	Environmental → Terrestrial → Soil → Loam	23.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.28%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1004262112	3300000364	Soil	MMHTAALKIVWRNPKPPQRQQRWEQIKHDSGTAHYLVQELVSTPAGLFWATISSLEILPGSLVA*
INPhiseqgaiiFebDRAFT_1044034781	3300000364	Soil	MTKTAELEIVWRNPKPPERRQRWEQITHGSETDHYLVQELVSTPEGSFWTTTSSLEIVQGGFAA*
JGI1027J11758_127980233	3300000789	Soil	EIVWRNLKPPQRRQRWEQINQNSETAHYVVQELVSTLAGSFWTATSSLEIIAGGRAA*
JGI1027J12803_1002827001	3300000955	Soil	AALKIVWRNPKPPQRQQRWEQIKHDSGTAHYLVQELVSTPAGLFWATISSLEILPGSLVA
JGI1027J12803_1005772581	3300000955	Soil	MARMATLEIVWRNLKPPQRRQRWEQINQNSETAHYVVQELVSTLAGSFWTATSSLEIIAGGRAA*
JGI10216J12902_1003161742	3300000956	Soil	MRNTAALEIVWRNQKPLQRRRRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA*
JGI12627J18819_100108782	3300001867	Forest Soil	MRKTTELEIVWRNQKPFQRRQRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA*
Ga0066396_100254202	3300004267	Tropical Forest Soil	MRKTAVLQIVWRNPKPPQRRQRWEQISRDSGTAHYQVQELVSGLIGSFWMTTLSLEFVPGGRAA*
Ga0066396_100941921	3300004267	Tropical Forest Soil	HTAALEIVWRNPKPPQRRQRWEQIKQDSGTPHYLVQELVLTPAGSFWTTTSNLEIVPGGRAA*
Ga0066395_110228931	3300004633	Tropical Forest Soil	MTQTAALEIVWRNPKPPQRWQRWEQVMRNSASGHYLLQELISTPVGSFWATTSSLEI
Ga0065715_101896112	3300005293	Miscanthus Rhizosphere	MTQRVALEIVWRNPQPPQRRQRWEQIEQDSGTPHYLVQELVSTPAGSFWATTSSLEIVHGGCAA*
Ga0066388_1000199023	3300005332	Tropical Forest Soil	MTHTAALEIVWRNPKPPQRRQRWEQIKQDSGTPHYLVQELVLTPAGSFWTTTSNLEIVPGGRAA*
Ga0066388_1000924955	3300005332	Tropical Forest Soil	MTDTEALEIVWRNPKPPQRRQRWEQINQDSGAAHYLVQELVSTAVGSFWATTSSLEIVHGGCAA*
Ga0066388_1000963244	3300005332	Tropical Forest Soil	MTRTTALEIVWRNPKPPKREQRWEQIMQDSRTARYLVQELVFTSVESFWINTSSLEVVPGGRAA*
Ga0066388_1002132485	3300005332	Tropical Forest Soil	MTKTAGLEIVWRNPKPPQRRQRREQITQDSATGHYLIQEFISTPVGSFWATTSSLEIVPGGRAA*
Ga0066388_1004760702	3300005332	Tropical Forest Soil	MTQTAALEIVWRNPKPPERRRRWEQITQDSATGHYLVQELVSTSVGAFWATTSSLEILPGGRAA*
Ga0066388_1054558142	3300005332	Tropical Forest Soil	MTKTAGLEIVWRNPKPLQRRQRREQITQDSATGHYLVQEFISTPAGSFWATTSSLEIVPGGRAA*
Ga0066388_1086483061	3300005332	Tropical Forest Soil	IVWRNPKPPQRHQRWEQINKDSRTAHYLVQELVSGVFGSFWMTTLSLQFVLGGRAA*
Ga0070709_103097232	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRAALEIVWRNPKPPQRRQRWEQIEQDSGTPHYLVQELVSTPAGSFWATTSSLEIVHGGCAA*
Ga0070710_100087624	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRAALEIVWRNPKPPQRRQRWEQIEQDSGTPHFLVQELVSTPAGSFWATTSSLEIVHGGCAA*
Ga0070711_1000347504	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRAALEIVWRNPKPPQRRQRWEQIEQDSGTPHYLVQELVSTAAGSFWATTSSLEIVHGGCAA*
Ga0070711_1015826972	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRNTAALEIVWRNQKSLQRRRRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEF
Ga0070698_1005136282	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTQTVALEIVWRNPKPPQRRQRWEQINPGSGATHYLVQELVSTPAGSFWATTSSLEIVHGGRAA*
Ga0070761_100439114	3300005591	Soil	MAQTARLEIVWRNPKPPQRRQRWEQVKQESGTAHYMVQELVSTSDGSFWTATSSLEIVPGGRAA*
Ga0070763_100032101	3300005610	Soil	MAQTARLEIVRRNPKRPQRRQRWEQIKQESGTAHYMVQELVSTLAGSFWTATSSLEIVPGGRAA*
Ga0070702_1001264282	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRVALEIVWRNPKPPQRRQRWEQIEQDSGTPHYLVQELVSTPAGSFWATTSSLEIVHGGCAA*
Ga0068859_1001046641	3300005617	Switchgrass Rhizosphere	MTQPAALEIVWRNPKPPQRHQRWKQDSGTAHYLVQELVSTLLGSFWATTSTLEIFPGGRAA*
Ga0066903_1002667703	3300005764	Tropical Forest Soil	MRKAALLEVIWRNPKPLHRRQRWEQINRNSGTAHYLVQELVSSPMGPFWVTTSNLEFVPGGRAA*
Ga0066903_1002924991	3300005764	Tropical Forest Soil	VRKTAALEVVWRNPKPLQRRQRCEQITHDSATSNYLVQELISSPEGSFWATTSSLEIVPGGRA
Ga0066903_1007855042	3300005764	Tropical Forest Soil	MTQTTALEIVWRNPKPPQRRQRWEHLRQDSGTAHYLVQELVLTSAGSFWATLSSLEIAHGGCAA*
Ga0066903_1022611982	3300005764	Tropical Forest Soil	MRETAGLEIVWRNPKPLQRRQRREQITQDSATGHYLVQEFISTPAGSFWATTSSLEIVPGGRA
Ga0068858_1001390972	3300005842	Switchgrass Rhizosphere	MTRRVALEIVWRNPKPPQRRQRWEQIEQDSGTPHFLVQELVSTPAGSFWATTSSLEIVHGGCAA*
Ga0070716_1014158822	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRNTAALEIVWRNQKSLQRRRRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA*
Ga0070712_1001327311	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	APFSCVGVQEKGGTTMRNTAALEIVWRNQKSLQRRRRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA*
Ga0075425_1000191084	3300006854	Populus Rhizosphere	MTQTGALEIVWRNPKAPQRLQRWEQIPQDSGSTHYLVQEFVSTLVGSFWTTTSSLELIPGGRAA*
Ga0075425_1001233395	3300006854	Populus Rhizosphere	MRNTAALEIVWRNQKSLQRRRRWEQVNQDSAVTHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA*
Ga0126374_100798202	3300009792	Tropical Forest Soil	MRKTRAFEIVWRNPEPAQPRQHWDQITQDSATGHYLVQQLISTPVGSFWATISSLEMVPGGRAA*
Ga0126374_104961532	3300009792	Tropical Forest Soil	MTHTAALEVVWRNPKPRQRQQRWAQIKHDSGTAHYLVQELVSSPAGLFWATTSSFEIVHGGCAA*
Ga0126374_105345781	3300009792	Tropical Forest Soil	MEGTAALEIVWRNPKPRLHRQRWEQLTQESTTARYLVQEYVSTSAGSFWTTTLSLEVVPGGRAA*
Ga0126384_100044242	3300010046	Tropical Forest Soil	MRETAGLEIVWRNPKPLQRRQRREQITQDSATGHYLVQEFISTPAGSFWATTSSLEIVPGGRAA*
Ga0126382_100167055	3300010047	Tropical Forest Soil	MRKTAAVEVVWRNPKPPQREQRWEQIKHGSGTAHYLVQELVSTPAGSFWATTSSLEIVHGGFAA*
Ga0126382_108018532	3300010047	Tropical Forest Soil	MTHTAALEVVWRNPKPPQRQQRWEQIKHDSGTDHYLVQELVSSPAGLFWATTSSFEIVHGGCAA*
Ga0126373_100993392	3300010048	Tropical Forest Soil	MAQTARLEIAWRNPRPPRRRQRWEQISHDSGTVHYMVQELVSTLAGPFWVVASSLELVSGGRAA*
Ga0126373_101761073	3300010048	Tropical Forest Soil	MAQTVGLEIVWRNPKPPQRQQRWEQISQDSGTAHYLVQEFSSTDGGWLWIPTSSLEVVAGGRAA*
Ga0126373_126102241	3300010048	Tropical Forest Soil	MTQTVAIEIVWRNPKPPQRWQRWEQVTKGSATGHYLLQELISTPVGSFWATTSSLEILRGGRAA*
Ga0126373_127741252	3300010048	Tropical Forest Soil	MERMAVLEIIWRNPKPPQRRRRWEPITQDSATGHYLVQEWISTPVGSFWATTSSLEI
Ga0126370_101246302	3300010358	Tropical Forest Soil	MTQMAALEIVWRNPKPPQRRQRWEHLRQDSGTAHYLVQELVLTSAGSFWATTSSLEIAHGGCAA*
Ga0126370_115188741	3300010358	Tropical Forest Soil	QRRQRWEQINRNSGTAHYLVQELVSSPMGPFWVTTSSLEFVPGGRAA*
Ga0126372_100350561	3300010360	Tropical Forest Soil	NPKPAQPGQRWEQITQDSATGHYLVQQLISTPVGSFWATISSLEMVPGGRAA*
Ga0126381_1028015682	3300010376	Tropical Forest Soil	MSRKVGVWIVWRNPKPPQRRQRWERIKRDSRATRYTVQEFFSTSDGSFWATTSSLEFVAGGRAA*
Ga0134126_101089613	3300010396	Terrestrial Soil	MTQRVALEIVWRNPKPPQRRQRWEQIEQDSGTPHFLVQELVSTPAGSFWATTSSLEIVHGGCAA*
Ga0126375_102201751	3300012948	Tropical Forest Soil	LEVVWRNPKPPQREQRWEQIKHGSGTAHYLVQELVSTPAGSFWATTSSLEIVHGGFAA*
Ga0126375_104823142	3300012948	Tropical Forest Soil	MRKTTALEVVWRNPKPPQREQRWEQIKHDSGTAHYLVQELVATPAGSFWATTSSLEIV
Ga0126369_100089682	3300012971	Tropical Forest Soil	VRKTAALEVVWRNPKPLQRRQRCEQITHDSATGHYLVQELISSPEGSFWATTSSLEIVPGGRVA*
Ga0181522_1000119318	3300014657	Bog	MAQTAMLEIVWRNPKPPQRRQRWEQIKQASGTAHYMIQELVSTSAGWFWTGTSSLEIVPGGRAA*
Ga0182035_101596422	3300016341	Soil	MTQTVALEIIWRNPKPPQRQQRWEQVTRNSASGHYLLQELISTPVGSFWATTASLEILRGGRAA
Ga0182032_120260112	3300016357	Soil	MTQTAKLEIVWRNPRPPQRQQRWQQINLLSGRGHYLVQELVPTSIGSFWTATLSFEVVPGGRAA
Ga0182034_106692402	3300016371	Soil	MTQTVALEIVWRNPTPPQRRQRWEPVMRNSASGHYLLQELVFTPVGSFWATTSSLEILRGGRA
Ga0182038_101344292	3300016445	Soil	MTQTAKLEIVWRNPRPPQRQQRWQQINLLSGTGRYLVQELVPTSIGSFWTTTLSFEVVLGGRAA
Ga0182038_101547232	3300016445	Soil	MTQTVALEIVWRNPTPPQRRQRWEPVMRNSASGHYLLQELVFSPVGSFWATTSSLEILRGGRAA
Ga0187783_1000266121	3300017970	Tropical Peatland	MAQTVALEIVWRNPRPPQRRQRWEHIKHDSGAAHYMVQELVSTAAGSFWATTSSLEIVHGGRAA
Ga0187783_101032782	3300017970	Tropical Peatland	MAQTATLEIVWRNPQPSQRRHRWEQIKQDSATAHYVVQELISTSDGSFWTAMSSLEIVPGGRAAYSRRAGGCCGGDRRRA
Ga0187782_101166972	3300017975	Tropical Peatland	MTQTVALEIVWRNPKPPQRRQRWEQVTRDSATGHYLLQELISSSVGSFWTTTSSLEILPGGRAA
Ga0187782_112988432	3300017975	Tropical Peatland	MKRMTGVEIMWRNPKPPQRRQRWEPLTQNSATGHYLVQELISTPVGSFWATTSSLEILRGGRAA
Ga0210399_100612844	3300020581	Soil	MARMATLEIVWRNPKPPQRRQRWEQINQNSETAHYVVQELVSTLAGSFWTATSSLEIIAGGRAA
Ga0210395_1000037914	3300020582	Soil	MTKTAALEIVWRNSKPPERRRRWEQIKQDSGVTRYLVQEFVSNSVGSFWMTTSSFEFVLGGRVA
Ga0210401_101901952	3300020583	Soil	MRKTTELEIVWRNQKPFQRRQRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA
Ga0210405_106835822	3300021171	Soil	MTQSGALEIVWRNPKPPQRRQRWEQINQDSGRAHYLVQECLSTAVGSFWATTSSLEVVPGGRAA
Ga0213874_100365172	3300021377	Plant Roots	MTQTETLEIVWRNLKPPQRRQRWEQVTRDSATGHYLLQELISTPVGSFWATTRLEILRGGRAA
Ga0210383_100011462	3300021407	Soil	MTQAVPLEIVWRNPKPPTRRQRWEQITQDSGTSHYLVQELISTLVGSFWAATSSLEILRGGRAA
Ga0210391_100609973	3300021433	Soil	MAQTARLEIVWRNPKPPQRRQRWEQVKQESGTAHYMVQELVSTSDGSFWTATSSLEIVPGGRAA
Ga0210402_100527084	3300021478	Soil	MTQTTTLAIVWRNPKPPQRRQRWEQTTRNSGTAHYVVKELVSTSAGSFWTAMSSLEIIAGGRAA
Ga0210402_102287912	3300021478	Soil	MTQTVPLEIVWRNLKAPSRRQRWEQITQDSATSHYLVQQLISTLVGSFWATTSSLEILRGGRAA
Ga0210402_113128721	3300021478	Soil	MTQAIPLEIVWRNPKPPTRRQRLEHITQDSATRHYLVQELISTLAGSFWVTTSSLEILCGGLVA
Ga0126371_1000046926	3300021560	Tropical Forest Soil	MRKTAVLQIVWRNPKPPQRRQRWEQISRDSGTAHYQVQELVSGLIGSFWMTTLSLEFVPGGRAA
Ga0126371_1000635412	3300021560	Tropical Forest Soil	MRKAAKLEIVWRNPKPTRRRQRWEQIKQDSGTAHYLVQELVSGVFGSFWMTTLSLQFVPGGRAA
Ga0126371_100642718	3300021560	Tropical Forest Soil	MTQMAALEIVWRNPKPPQRRQRWEHLRQDSGTAHYLVQELVLTSAGSFWATTSSLEIAHGGCAA
Ga0126371_109028742	3300021560	Tropical Forest Soil	MTQTAKLEIVWRNPRPPQRQQRWQQINLLSGTGRYLVQELVPTSIGSFWTTTLSFEVVPGGRAA
Ga0207685_101446621	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRAALEIVWRNPKPPQRRQRWEQIEQDSGTPHYLVQELVSTAAGSFWATTSSL
Ga0207671_101943092	3300025914	Corn Rhizosphere	MTQRAALEIVWRNPKPPQRHQRWKQDSGTAHYLVQELVSTLLGSFWATTSTLEIFPGGRA
Ga0207693_101483544	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RNTAALEIVWRNQKSLQRRRRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA
Ga0209622_10035781	3300027502	Forest Soil	MRKATELEIVWRNQKPFQRRQRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA
Ga0209693_103087341	3300027855	Soil	MAQTARLEIVRRNPKRPQRRQRWEQIKQESGTAHYMVQELVSTLAGSFWTATSSLEIVPGGRAA
Ga0268264_101776771	3300028381	Switchgrass Rhizosphere	MTQPAALEIVWRNPKPPQRHQRWKQDSGTAHYLVQELVSTLLGSFWATTSTLEIFLGG
Ga0310915_100410102	3300031573	Soil	MGRIAVLEIVWRNPKPPQRRRRWEPITQDSATGHYLVQELISTPVGSFWATTSSLEILPGGRAA
Ga0310915_109557231	3300031573	Soil	MRKTAVLKIVWRNPNPPQRHQRWEQINQDSGTAHYLVQELVSGVFGSFWMTTLSLQFVPGGRAA
Ga0307469_103571391	3300031720	Hardwood Forest Soil	MRNTAALEIVWRNQKPLQRRRRWEQLNQASAATHYLVQELVSSPLGSFWRTTSNLEFIPGGRAA
Ga0307468_1009806232	3300031740	Hardwood Forest Soil	MRNTAALEIVWRNQKPLQRRRRWEQVNQDSAATHYLVQELVSSPIGSFWRTTSNLEFLPGGRAA
Ga0306918_111762132	3300031744	Soil	MTQTVALEIVWRNPTPPQRRQRWEPVMRNSASGHYLLQELVFTPVGSFWATTSSLEILR
Ga0306918_113133751	3300031744	Soil	TMTQTAKLEIVWRNPRPPQRQQRWQQINLLSGTGHYLVQELVPTSIGSFWTTTLSFEVVLGGRAA
Ga0307477_101741523	3300031753	Hardwood Forest Soil	MTQSGALEIVWRNPKPPQRRQRWEQINQDSGRAHYLVQECLSTAVGSFWATTSSLEVVPGGQAA
Ga0307473_100152087	3300031820	Hardwood Forest Soil	MKNTAALEIVWRNQKPLQRRRRWEQVNQDSAATHYLVQELVSSPLGSFWRTTSNLEFLPGGRAA
Ga0307478_104056473	3300031823	Hardwood Forest Soil	MTQTVALEIVWRNPKPPQRRQRWEQINRGSGTTHYLIQELVSIYGGSFWATMSSLEVVPGGRAA
Ga0306923_110383632	3300031910	Soil	MEQIAAIELIWRNPKPPQRRQRWEQITQDSATGRYLVQELISTLAGSFWATTSSLETVPGGRAA
Ga0306921_100333914	3300031912	Soil	MTQTVALEIVWRNPTPPQRRQRWEPVMRNSASGHYLLQELVFTPVGSFWATTSSLEILRGGRAA
Ga0306921_100971553	3300031912	Soil	MTQTAKLEIVWRNPRPPQRQQRWQQINLLSGTGHYLVQELVPTSIGSFWTTTLSFEVVLGGRAA
Ga0310909_100450693	3300031947	Soil	MTQTAKLEIVWRNPRPPQRQQRWQQINLLSGTGHYLVQELVPTSIGSFWTTTLSFEVVPGGRAA
Ga0306926_104980232	3300031954	Soil	TAKLEIVWRNPRPPQRQQRWQQINLLSGTGHYLVQELVPTSIGSFWTTTLSFEVVLGGRA
Ga0307479_100432064	3300031962	Hardwood Forest Soil	MTPTAVEIVWRNPKRPQRWQRWEQIKQDSGTARYLVQEFIFTPVGSFWTTTSSLELVPGGRAA
Ga0307479_101829413	3300031962	Hardwood Forest Soil	MARMATLGIVWRNPKPPQRRQRWEQINQNSETAHYVVQELVSTSAGSFWTAMSSLEVIAGGRAA
Ga0306922_102263502	3300032001	Soil	MTQTAKLEIVWRNPRPPQRQQRWQQINLLSGRGHYLVQELVPTSIGSFWTTTLSFEVVPGGRAA
Ga0306922_106959271	3300032001	Soil	MTQTVALEIVWRNPTPPQRRQRWEPVMRNSASGHYLLQELVFTPVGSFWATTSSLEILRGGR
Ga0307471_1001099262	3300032180	Hardwood Forest Soil	MTQRVALEIVWRNPKPPQRRQRWEQIEQDSGTPHYLVQELVSTPAGSFWATTSSLEIVHGGCAA
Ga0307472_1000786841	3300032205	Hardwood Forest Soil	RNQKPLQRRRRWEQVNQDSAATHYLVQELVSSPIGSFWRTTSNLEFLPGGRAA
Ga0307472_1001057891	3300032205	Hardwood Forest Soil	MTQRAALEIVWRNPKPPQRRQRWEQIEQDSGTPHYLVQELVSTPAGSFWATT
Ga0335079_100468214	3300032783	Soil	MMHTAALEIVWRNPKPPQRQQRWEQIKRDSGTAHYLVQELVSTPAGLFWATISSLEILPGSLVA
Ga0335079_103839592	3300032783	Soil	MSQTAMLEIVWRNPKPLQRTQRWEQIKRGSGTAHYVIQELVSTSGGSFWTATSSLEIVPGGRAA
Ga0335079_115508151	3300032783	Soil	MTQTTTTLAIVWRNPKPPQHRRRWEQIKLDSETTQYVVQELVSSSGGSFWTAMSSLEIIAGGRAA
Ga0335078_100637415	3300032805	Soil	MTKLANLEFVWRNPELPQRHQRWEQINLVSGMALYLVQESVSTSIGSFWSTTSSLEVVRRGRVA
Ga0335080_100148245	3300032828	Soil	MGQTANLKIVWRNPKPSQRQQRWEHIKQESGTAHYMVQELVSTAAGTFWMIASSFELVSGGRAA
Ga0335081_100587732	3300032892	Soil	MRQTAKLEIVWRNSKPPRRQQRWEQINLLSGTGHYLVQELVPTSIGSFWTTTSSLEVAPGGRAA
Ga0335081_102702343	3300032892	Soil	MTQTTPLAIVWRNPKPPQCRQRWEQTTRNSGTAHYVVKELVSTSAGSFWTAMSSLEIIAGGRAA
Ga0335069_100678105	3300032893	Soil	MVHTVALEIVWRNPKPRQRQRRWERIKQDSGATRYLVQELVFTSTGSFWTTTSSLEFVSGGQAA
Ga0335074_102581583	3300032895	Soil	MTQTTTLAIVWRNPKPPQRRQRWEQTTRNSGTAHYVVKELVSTSAGSFWTAMSSLEVFAGGRAA
Ga0335075_101147582	3300032896	Soil	MMHTAALEIVWRNPKPPQRQQRWEQVTRDSTTGHYLLQELISTPVGSFWATTSSLEILRGGRAA
Ga0335072_101429212	3300032898	Soil	MTQTTTLAIVWRNPKPPQRRQRWEQIKLGSETTQYVVQELVSTSGGSFWTAMSSLEIIAGGRAA
Ga0335072_105116502	3300032898	Soil	MMQTAALEIVWRNPKPPQRQQRWEQIKQISGTVHYVVQELVSTSAGSFWTAMSSLEIIAGGRAA
Ga0335072_111105712	3300032898	Soil	MTQAIPLEIVWRNPQPPTRRQRLEQIKHDSGTAHYLVQELVSTPAGLFWATISSLEILSGSLVA
Ga0335076_1000251710	3300032955	Soil	MERLAALQIIWRNPKPLQRQQRWEQITQDSVTGHYLVQELIATPVGAFWATTSSLEILPGGRAA
Ga0335076_116491971	3300032955	Soil	MTQAVPLEIVWRNPKPPTRRQRLEQITQDSATGHYLVQELISTLAGSFWATTSSLEILRGGRAA
Ga0335077_110564102	3300033158	Soil	MMHTAALEIVWRNPKPPQRQQRWEQVTRDSTTGHYLLQELISTPVGSFWATTSSLEILR
Ga0318519_104059682	3300033290	Soil	MTQTAKLEIVWRNPRPPQRQQRWQQINLLSGRGHYLVQELVPTSIGSFWTTTLSFEVVPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071543

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences