Metagenome / Metatranscriptome Family F071570

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071570
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	84 residues
Representative Sequence	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR
Number of Associated Samples	117
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.26 %
% of genes near scaffold ends (potentially truncated)	44.26 %
% of genes from short scaffolds (< 2000 bps)	86.89 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.016 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.213 % of family members)
Environment Ontology (ENVO)	Unclassified (34.426 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.459 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.33% β-sheet: 2.53% Coil/Unstructured: 91.14%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00408	PGM_PMM_IV	27.87
PF02880	PGM_PMM_III	27.05
PF11716	MDMPI_N	7.38
PF00440	TetR_N	3.28
PF07690	MFS_1	0.82
PF00196	GerE	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	54.92
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	54.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.02 %
Unclassified	root	N/A	40.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.28 %
Unclassified	root	N/A	40.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.36 %
Unclassified	root	N/A	40.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.92 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.46 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.64 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.92 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.46 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.64 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.82 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.64 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples	1.64 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	0.82 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.82 %
Micropruina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Micropruina	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.92 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1.64 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.64 %
unclassified Micropruina	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Micropruina → unclassified Micropruina	0.82 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.82 %
Mycobacteroides abscessus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.92 %
Streptomyces sp. PsTaAH-130	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PsTaAH-130	1.64 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1.64 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.82 %
Arthrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp.	0.82 %
Micropruina sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Micropruina → unclassified Micropruina → Micropruina sp.	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0918036	Not Available	647	Open in IMG/M
3300001979\|JGI24740J21852_10119162	Not Available	662	Open in IMG/M
3300003659\|JGI25404J52841_10001028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4617	Open in IMG/M
3300004643\|Ga0062591_102831929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	514	Open in IMG/M
3300005105\|Ga0066812_1007481	Not Available	718	Open in IMG/M
3300005158\|Ga0066816_1014965	Not Available	611	Open in IMG/M
3300005162\|Ga0066814_10009900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp.	1150	Open in IMG/M
3300005179\|Ga0066684_10589537	Not Available	746	Open in IMG/M
3300005187\|Ga0066675_10017358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3980	Open in IMG/M
3300005329\|Ga0070683_100079027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3078	Open in IMG/M
3300005334\|Ga0068869_100186798	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300005336\|Ga0070680_100227365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1575	Open in IMG/M
3300005344\|Ga0070661_100968664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300005345\|Ga0070692_10216020	Not Available	1131	Open in IMG/M
3300005353\|Ga0070669_101337191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	621	Open in IMG/M
3300005367\|Ga0070667_100227916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1660	Open in IMG/M
3300005437\|Ga0070710_10314191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1026	Open in IMG/M
3300005438\|Ga0070701_11311057	Not Available	518	Open in IMG/M
3300005439\|Ga0070711_100123390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1919	Open in IMG/M
3300005450\|Ga0066682_10795563	Not Available	572	Open in IMG/M
3300005468\|Ga0070707_100123100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	2518	Open in IMG/M
3300005468\|Ga0070707_100340172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1458	Open in IMG/M
3300005549\|Ga0070704_100660782	Not Available	923	Open in IMG/M
3300005578\|Ga0068854_101512681	Not Available	609	Open in IMG/M
3300005598\|Ga0066706_11174148	Not Available	584	Open in IMG/M
3300005719\|Ga0068861_100139924	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300005842\|Ga0068858_101118370	Not Available	773	Open in IMG/M
3300005844\|Ga0068862_100358285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1355	Open in IMG/M
3300006046\|Ga0066652_100900914	Not Available	844	Open in IMG/M
3300006173\|Ga0070716_100430726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	956	Open in IMG/M
3300006572\|Ga0074051_11749995	Not Available	676	Open in IMG/M
3300006575\|Ga0074053_11795832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	598	Open in IMG/M
3300006576\|Ga0074047_11806920	Not Available	580	Open in IMG/M
3300006604\|Ga0074060_11958615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1247	Open in IMG/M
3300006755\|Ga0079222_11267413	All Organisms → cellular organisms → Bacteria → Terrabacteria group	668	Open in IMG/M
3300006755\|Ga0079222_11358308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PsTaAH-130	653	Open in IMG/M
3300006800\|Ga0066660_11052067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PsTaAH-130	650	Open in IMG/M
3300006804\|Ga0079221_10323860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	917	Open in IMG/M
3300006806\|Ga0079220_11848556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300006871\|Ga0075434_101629873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300006881\|Ga0068865_100055739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2752	Open in IMG/M
3300006903\|Ga0075426_10144958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1712	Open in IMG/M
3300006903\|Ga0075426_11423866	Not Available	527	Open in IMG/M
3300006904\|Ga0075424_100832862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	984	Open in IMG/M
3300006954\|Ga0079219_10216076	Not Available	1104	Open in IMG/M
3300006954\|Ga0079219_10618385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300009098\|Ga0105245_13052154	Not Available	519	Open in IMG/M
3300009553\|Ga0105249_10100566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2719	Open in IMG/M
3300009792\|Ga0126374_11256760	Not Available	596	Open in IMG/M
3300010325\|Ga0134064_10077620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300010326\|Ga0134065_10371414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300010333\|Ga0134080_10329351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300010335\|Ga0134063_10146812	Not Available	1092	Open in IMG/M
3300010336\|Ga0134071_10713142	Not Available	531	Open in IMG/M
3300010337\|Ga0134062_10102443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300010364\|Ga0134066_10131128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Micropruina → unclassified Micropruina → Micropruina sp.	766	Open in IMG/M
3300010401\|Ga0134121_10428526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1202	Open in IMG/M
3300010858\|Ga0126345_1184644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300010877\|Ga0126356_10204649	Not Available	616	Open in IMG/M
3300012201\|Ga0137365_10187677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1548	Open in IMG/M
3300012206\|Ga0137380_10983331	Not Available	722	Open in IMG/M
3300012208\|Ga0137376_10537938	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012493\|Ga0157355_1012962	Not Available	681	Open in IMG/M
3300012507\|Ga0157342_1042687	Not Available	612	Open in IMG/M
3300012685\|Ga0137397_11171277	Not Available	555	Open in IMG/M
3300012930\|Ga0137407_10325216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1411	Open in IMG/M
3300012944\|Ga0137410_11706540	Not Available	554	Open in IMG/M
3300012951\|Ga0164300_10291652	All Organisms → cellular organisms → Bacteria → Terrabacteria group	849	Open in IMG/M
3300012955\|Ga0164298_10045723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2072	Open in IMG/M
3300012984\|Ga0164309_10879299	Not Available	728	Open in IMG/M
3300012989\|Ga0164305_10292508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1199	Open in IMG/M
3300013102\|Ga0157371_10026534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4210	Open in IMG/M
3300013105\|Ga0157369_11625542	Not Available	657	Open in IMG/M
3300013297\|Ga0157378_10139661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2249	Open in IMG/M
3300014166\|Ga0134079_10673085	Not Available	524	Open in IMG/M
3300014326\|Ga0157380_10620772	Not Available	1073	Open in IMG/M
3300015357\|Ga0134072_10408293	Not Available	537	Open in IMG/M
3300015359\|Ga0134085_10369256	Not Available	640	Open in IMG/M
3300017792\|Ga0163161_10026713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4090	Open in IMG/M
3300019362\|Ga0173479_10705885	Not Available	545	Open in IMG/M
3300020022\|Ga0193733_1194881	Not Available	524	Open in IMG/M
3300021180\|Ga0210396_11745616	Not Available	504	Open in IMG/M
3300021344\|Ga0193719_10278394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	704	Open in IMG/M
3300024181\|Ga0247693_1001401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2781	Open in IMG/M
3300024182\|Ga0247669_1053890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300024251\|Ga0247679_1067637	Not Available	598	Open in IMG/M
3300024279\|Ga0247692_1059204	Not Available	596	Open in IMG/M
3300024283\|Ga0247670_1003562	All Organisms → cellular organisms → Bacteria	3050	Open in IMG/M
3300024288\|Ga0179589_10109096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1141	Open in IMG/M
3300024323\|Ga0247666_1059649	Not Available	766	Open in IMG/M
3300025905\|Ga0207685_10486039	Not Available	648	Open in IMG/M
3300025906\|Ga0207699_10630134	Not Available	782	Open in IMG/M
3300025915\|Ga0207693_10129963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1980	Open in IMG/M
3300025926\|Ga0207659_10110563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2088	Open in IMG/M
3300025935\|Ga0207709_11580727	Not Available	545	Open in IMG/M
3300025942\|Ga0207689_10006013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10735	Open in IMG/M
3300025986\|Ga0207658_12062545	All Organisms → cellular organisms → Bacteria → Terrabacteria group	519	Open in IMG/M
3300026899\|Ga0209326_1001889	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300027466\|Ga0207484_103746	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300027775\|Ga0209177_10374673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	564	Open in IMG/M
3300028146\|Ga0247682_1102322	Not Available	535	Open in IMG/M
3300028711\|Ga0307293_10310390	All Organisms → cellular organisms → Bacteria → Terrabacteria group	500	Open in IMG/M
3300028716\|Ga0307311_10064013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300028718\|Ga0307307_10036637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1409	Open in IMG/M
3300028768\|Ga0307280_10026345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1710	Open in IMG/M
3300028768\|Ga0307280_10297295	Not Available	588	Open in IMG/M
3300028782\|Ga0307306_10142297	All Organisms → cellular organisms → Bacteria → Terrabacteria group	663	Open in IMG/M
3300028787\|Ga0307323_10067113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1273	Open in IMG/M
3300028793\|Ga0307299_10162730	Not Available	840	Open in IMG/M
3300028799\|Ga0307284_10129066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300028819\|Ga0307296_10062432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1975	Open in IMG/M
3300028828\|Ga0307312_10012182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4756	Open in IMG/M
3300028881\|Ga0307277_10037778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1943	Open in IMG/M
3300031716\|Ga0310813_10173293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1752	Open in IMG/M
3300031720\|Ga0307469_12394487	All Organisms → cellular organisms → Bacteria → Terrabacteria group	515	Open in IMG/M
3300031740\|Ga0307468_101078526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300032770\|Ga0335085_10333592	Not Available	1783	Open in IMG/M
3300032898\|Ga0335072_11021935	Not Available	756	Open in IMG/M
3300033412\|Ga0310810_10991496	Not Available	720	Open in IMG/M
3300034661\|Ga0314782_208170	Not Available	510	Open in IMG/M
3300034668\|Ga0314793_036207	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.87%
Host-Associated	Host-Associated	22.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.87%
Plants	Host-Associated → Plants	22.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.02%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.75%
Loam	Environmental → Terrestrial → Soil → Loam	11.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027466	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-B (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09180361	2228664022	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRPAEV
JGI24740J21852_101191622	3300001979	Corn Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVRNLGVQQVVDGSARR
JGI25404J52841_100010282	3300003659	Tabebuia Heterophylla Rhizosphere	MRTCAGYPRDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPAGVGVGGNEHGASRYRGTARQLIR*
Ga0062591_1028319292	3300004643	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPVGVGVGGKERGASRYRGTA
Ga0066812_10074812	3300005105	Soil	MRTCTGYPPDRRPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRSAEA*
Ga0066816_10149651	3300005158	Soil	MRTCTGYPPDRRPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRSA
Ga0066814_100099003	3300005162	Soil	PGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRQAEI*
Ga0066684_105895372	3300005179	Soil	MRTCAGYPPGRCPGQTVTLPDELAAVPATRTFRPGVSPALSFPHAAEDGPVSTRPAGVGVGGREHGASRYRGTARHLTTSTST
Ga0066675_100173586	3300005187	Soil	MRTCAGYPPGRCPGQTVTLPDELAAVPATRTFRPGVSPALSFPHAAEDGPVSTRPVGVGVGGKEHGPSQYRGTARQLTTST*
Ga0070683_1000790272	3300005329	Corn Rhizosphere	MRTCAGYPPDRCPGQTVTLPVERRGTSDEEFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTAGN*
Ga0068869_1001867982	3300005334	Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRNVARAGTSGA*
Ga0070680_1002273652	3300005336	Corn Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR*
Ga0070661_1009686642	3300005344	Corn Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGASPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVRNLGIQQVVDGS
Ga0070692_102160201	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASR
Ga0070669_1013371912	3300005353	Switchgrass Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRVAGPRNVARAGTSRAWPSRAWPSRAWPSRA
Ga0070667_1002279162	3300005367	Switchgrass Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR*
Ga0070710_103141912	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCTEYPPGCRPGRTVTLPDELAAVGDEDVPPRGVPRASFPHAAEDGPVSTRPVGVGVGGKEHGASQYRGTARQLTTRT*
Ga0070701_113110571	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVRNLGVQQVVDGGARRPPADGPAEVHGVQGPARAV
Ga0070711_1001233902	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCTEYPPGRRPGRTVTLPDERRGTSDEDVPPRGVPRASFPHAAEDGPVSTRPVGVGVGGKEHGASQYRGTARQLTTRT*
Ga0066682_107955631	3300005450	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARHLIRQAEV*
Ga0070707_1001231003	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRAGAEQAADLRRIPPGRCPGQTVTLPDEFAADQREDVPPRGVPRAPFPHAAEDGPVSTRPVGVGVGEKEHGTSRYRGTARQLIP*
Ga0070707_1003401721	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRPAEV*
Ga0070704_1006607822	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYR
Ga0068854_1015126812	3300005578	Corn Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVRNLGVQQVVDGGA
Ga0066706_111741481	3300005598	Soil	MRTCAGYPPGRCPGQTVTLPDELAAVPATRTFRPGVSPALSFPHAAEDGPVSTRPAGVGVGGREHGASRYRGTARHLTTSTSTGPRCSAA
Ga0068861_1001399242	3300005719	Switchgrass Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRNVARAGTSGA*
Ga0068858_1011183702	3300005842	Switchgrass Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRPAEV*
Ga0068862_1003582852	3300005844	Switchgrass Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRR
Ga0066652_1009009142	3300006046	Soil	MRTCTGYSPGRGPGRTVTLPDELAAVRAMRTFRLGVSPRASFPYAVEDGPVSTRPDGVGVGGKEHGPSQYRGTARQLTTST*
Ga0070716_1004307261	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PGRTVTLPDERRGTSDEDVPPRGVPRASFPHAAEDGPVSTRPVGVGVGGKEHGPSQYRGTARN*
Ga0074051_117499952	3300006572	Soil	MRTCNGYPPDRRPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARHLIRPAEV*
Ga0074053_117958322	3300006575	Soil	MRTCTGYPPDRRPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARHLIR*
Ga0074047_118069201	3300006576	Soil	MRTCTGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRSAEA*
Ga0074060_119586153	3300006604	Soil	RCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRSAEA*
Ga0079222_112674132	3300006755	Agricultural Soil	MRTCAGYPPGRCPGQTVTLPVELAAVPATRTFRPGVSPVLPFPHAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRVEV*
Ga0079222_113583081	3300006755	Agricultural Soil	MRTCPDYPPGRRPGRTVTLPDERRGTSDEDVPPRGVPRASFPHAAEDGPVSTRPVGVGVGGKEHGLSQYRGTARN*
Ga0066660_110520671	3300006800	Soil	MRTCTEYPPGRCPGRTVTLPDERRGTSDEDVPPRGVPRASFPHAAEDGPVSTRPVGVGVGGKVRGPSQYRGTARN*
Ga0079221_103238601	3300006804	Agricultural Soil	MRTCTEYPPGRGPGRTVTLPDERRGTSDEDVPPRGVPRASFPHAAEDGPVSTRPVGVGVGGKEHGLSQYRGTARN*
Ga0079220_118485561	3300006806	Agricultural Soil	MRTCPEYPPGRRPGRTVTLPDERRGTSDEDVPPRGVPRASFPHAAEDGPVSTRPAGVGVGGKEHGASQYRGTARQLTTRT*
Ga0075434_1016298731	3300006871	Populus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGASPALPFPYAAEDGPVSTRPVGVGVGGKEHGASR
Ga0068865_1000557394	3300006881	Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRNVARAGTSGTWSSRARHPADDSYEV*
Ga0075426_101449581	3300006903	Populus Rhizosphere	MRTCTEYPPGRGPGRTVTLPDELAAVGDEDVPPRGVPRASFPHAAEDGPVSTRPVGVGVGGKEHGLSQYRGTAGN*
Ga0075426_114238662	3300006903	Populus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKERGASRYRGTARQVIRRGLVRNLGVQQVVDGGAGRPPGD
Ga0075424_1008328622	3300006904	Populus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVERRGTSDEDVPLRGVPRAPIPVAAEDGPVSTRPVGVGVGGKEHGASRYRGTAGN*
Ga0079219_102160762	3300006954	Agricultural Soil	MRTCAGYPPGRCPGQTVTLPVELAAVPATRTFRPGVSPVLPFPHAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR
Ga0079219_106183851	3300006954	Agricultural Soil	TVTLPDELAADQRTRTVRPGVSPVLQFPYAAEDGLVSTSARVGVGGNEHGVPRYRGTARH
Ga0105245_130521542	3300009098	Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRNVARAGTSGAWSSRARHPADDSYEV*
Ga0105249_101005662	3300009553	Switchgrass Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRVAGPRNVARAGTSGTWSSRARHPADDSYEV*
Ga0126374_112567601	3300009792	Tropical Forest Soil	MRTCAGYPPDRCPGQTVTLPVELAAIPATRTFRPGVSPALPFPHAAEDGPVSTRPAGVGVGGKEHGASRYRGTARQLIRRRP
Ga0126380_103750182	3300010043	Tropical Forest Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEGGPVSTRPAGVGVGG
Ga0134064_100776202	3300010325	Grasslands Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFLPGVSPVLPFPHAAEDGPVSTRPAGVGVGGKEHGASRYRGTARQLIRRRPAQRGAGRPFAGLAFAGEI*
Ga0134065_103714142	3300010326	Grasslands Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSIRPVGVGVGGKEHGASRYRGTARQLIPDSTRPATVARRDRVVPLASPRPAGT*
Ga0134080_103293511	3300010333	Grasslands Soil	SRCGAPGRGRHADLRRIPPDRCPGQTVTLPVEPAAVPATRTFRPGVSPALPFPHATENGPVSIRPVGVGVGGKEHGASRYRGTARQLIRPAEV*
Ga0134063_101468122	3300010335	Grasslands Soil	MRTCTGYSPGRGPGRTVTLPDELAAVRAMRTFRPGVSPALPFPHATENGPVSIRPVGVGVGGKEHGASRYRGTARHSIRP
Ga0134071_107131421	3300010336	Grasslands Soil	MRTCTGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATDDGPVSTRPVGVGVGGKERGASRYRGTARHLIR*
Ga0134062_101024432	3300010337	Grasslands Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATENGPVSIRPVGVGVGGKEHGASRYRGTARHSIRPAGV*
Ga0134066_101311281	3300010364	Grasslands Soil	MRTCAGYPPGRCPGQTVTLPDELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGAS
Ga0134121_104285262	3300010401	Terrestrial Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGASPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR*
Ga0126345_11846441	3300010858	Boreal Forest Soil	RAGEAHEAARRGGAGMRTCTGYPPGRSPGRTVTLPDELAAVRAMRMFRPGVSPALSFPHAAEDGPVSTRPVGVGVGGKEHGASPYRGTARQLTTST*
Ga0126356_102046492	3300010877	Boreal Forest Soil	MRTCTGYPPDRRPGQTVTLPVEPAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRQAEA*
Ga0137365_101876772	3300012201	Vadose Zone Soil	MRTCTGYPPDRRPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR*
Ga0137380_109833312	3300012206	Vadose Zone Soil	MRTCTGYPPDRRPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRQAEA*
Ga0137376_105379381	3300012208	Vadose Zone Soil	MRTCTGYPRDRCRGQTVTLPVELAAVSATRTFRPGVSPALSFPHAAEDGPVSTRPVGVGVGGKVRCPSQYRGTARQLTTST*
Ga0157355_10129621	3300012493	Unplanted Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPAGVGVGGKEHGASRYRGTARQLIRRGLVRNLGVQQVV
Ga0157342_10426871	3300012507	Arabidopsis Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVRNLRVQQVVDG
Ga0137397_111712772	3300012685	Vadose Zone Soil	MRRRAGAGAGMRTCAGYPSDRRPGQTVTLPDEFAAVPALRTFRPGVSPRAPFPHAAEDGPVSTRPVGVGVGEKEHGTSRYRGTARQLTTRT*
Ga0137407_103252162	3300012930	Vadose Zone Soil	MRTCTGYPPDRCPGQTVTLPVELAAVSATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRPAEV*
Ga0137410_117065402	3300012944	Vadose Zone Soil	MRTCTGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASLYRGTARQLIRPAEV*
Ga0164300_102916522	3300012951	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTSRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR*
Ga0164298_100457232	3300012955	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEQGASRYRGTARQLIR*
Ga0164309_108792991	3300012984	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTSRPGVSPVLPFPYAAQDGPVSTRPVGVGVGGKEHG
Ga0164305_102925082	3300012989	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTSRPGASPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR*
Ga0157371_100265345	3300013102	Corn Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIR*
Ga0157369_116255422	3300013105	Corn Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASR
Ga0157378_101396612	3300013297	Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRPAEG*
Ga0134079_106730851	3300014166	Grasslands Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALSFPHAAEDGPVSTRPAGVGVGGREHGASRYRGTARHLILRPILR*
Ga0157380_106207721	3300014326	Switchgrass Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVR
Ga0134072_104082932	3300015357	Grasslands Soil	GRGRHADLHRIPPDRCPGQTVTLPVEPAAVPATRTFRPGVSPVLPFPHAAEDGPVSTRPAGVGVGGKEHGASRYRGTARQLIRRRPARRGAGRPFAGLAFAGEI*
Ga0134085_103692561	3300015359	Grasslands Soil	MRTCTEYPPGRCPGRTVTLPDELAAVRAMRTFRPGVSPALSFPHAAEDGPVSTRPAGVGVGGREHGASRYRGTARHLTTSTST
Ga0163161_100267133	3300017792	Switchgrass Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRNVARAGTSGAWSSRARHPADDSYEV
Ga0173479_107058851	3300019362	Soil	MRTCAGYPPDRCPGQTVTLSVEPAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQSIRRGLVRNLGVQQVVDGGAGRPPGDGPAEVR
Ga0193733_11948811	3300020022	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSLVLPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRVAGPRSVARAGTSRAWSS
Ga0210396_117456162	3300021180	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTSRPGVSPVLPFPYAAQDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVRNLG
Ga0193719_102783942	3300021344	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRSVARAGTSRAWSARARHPADDSYEV
Ga0247693_10014012	3300024181	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIR
Ga0247669_10538902	3300024182	Soil	AGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR
Ga0247679_10676371	3300024251	Soil	MRTCAEYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPVLPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVRNLGI
Ga0247692_10592041	3300024279	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGAS
Ga0247670_10035623	3300024283	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGASPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR
Ga0179589_101090962	3300024288	Vadose Zone Soil	MRTCTGYPPDRCPGQTVTLPVEPAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRPAEV
Ga0247666_10596492	3300024323	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQL
Ga0207685_104860391	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVRNLGV
Ga0207699_106301342	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRQGLV
Ga0207693_101299632	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRG
Ga0207659_101105632	3300025926	Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTAR
Ga0207709_115807272	3300025935	Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGK
Ga0207689_100060139	3300025942	Miscanthus Rhizosphere	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRNVARAGTSGA
Ga0207658_120625452	3300025986	Switchgrass Rhizosphere	QTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIR
Ga0209326_10018891	3300026899	Forest Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVWRLS
Ga0207484_1037461	3300027466	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVR
Ga0209177_103746732	3300027775	Agricultural Soil	MRTCAGYPPGRCPGQTVTLPVELAAVPATRTFRPGVSPVLPFPHAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRRGLVVAPVLGQT
Ga0247682_11023222	3300028146	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRY
Ga0307293_103103901	3300028711	Soil	PPDRRPGQTVTLPVEPAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRQAEA
Ga0307311_100640132	3300028716	Soil	AGMRTCTGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAKDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRSVARAGTSRAWSSRARHPADDSYEV
Ga0307307_100366372	3300028718	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRSVARAGTSRAWSSRARHPADDSYEV
Ga0307280_100263451	3300028768	Soil	MRTCAEYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRSVARAGTSRAWSSRARHPADDSYEV
Ga0307280_102972951	3300028768	Soil	MRTCTGYPPDRRPGQTVTLPVEPAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHC
Ga0307306_101422972	3300028782	Soil	MRTCTGYPPDRRPGQTVTLPVEPAAVPATRTFRPGVSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRQAEA
Ga0307323_100671132	3300028787	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAKDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVA
Ga0307299_101627302	3300028793	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAKDGPVSTRPADVGVGGKEH
Ga0307284_101290662	3300028799	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRQAEA
Ga0307296_100624322	3300028819	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAKDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRSVARAGTSRAWSSRARHPADDSYEV
Ga0307312_100121824	3300028828	Soil	MRTCTGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPADVGVGGKEHGASRYRGTARQLIRRVAGPRSVARAGTSRAWSSRARHPADDSYEV
Ga0307277_100377782	3300028881	Soil	MRTCTGYPPDRRPGQTVTLPVEPAAVPATRTFRLGMSPALPFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRQTEA
Ga0310813_101732931	3300031716	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPVGVGVGGKERGASRYRGTARQLIR
Ga0307469_123944871	3300031720	Hardwood Forest Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRPAEV
Ga0307468_1010785262	3300031740	Hardwood Forest Soil	PAPDTPRDRCPGQTVTLPVELAAVSATRTFRPGVSPALPFPHATKDGPVSTRPVGVGVGGKEHGASRYRGTARQLIRPAEV
Ga0335085_103335923	3300032770	Soil	MRTCTGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALSFPHATEDGPVSTRPVGVGVGGKEHGASRYRGTARHLIRQAGV
Ga0335072_110219351	3300032898	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPVLPFPHAAEDGPVSTRPVGVGVGGKEHGASRYRGTARHLIRRRPAQRGAGRPFADEI
Ga0310810_109914962	3300033412	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPHAAEDGPVSTRPVGVGVGGKERGAS
Ga0314782_208170_2_286	3300034661	Soil	RAGEAHGAARRGGAGMRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRPGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARHLIR
Ga0314793_036207_461_700	3300034668	Soil	MRTCAGYPPDRCPGQTVTLPVELAAVPATRTFRSGVSPALPFPYAAEDGPVSTRPVGVGVGGKEHGASRYRGTARRRSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071570

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences