Basic Information | |
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Family ID | F071592 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 122 |
Average Sequence Length | 63 residues |
Representative Sequence | ALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVIGEFSASEFPALARSVGVSGALIDSHA |
Number of Associated Samples | 99 |
Number of Associated Scaffolds | 122 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.88 % |
% of genes near scaffold ends (potentially truncated) | 87.70 % |
% of genes from short scaffolds (< 2000 bps) | 87.70 % |
Associated GOLD sequencing projects | 92 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.50 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (86.885 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.852 % of family members) |
Environment Ontology (ENVO) | Unclassified (29.508 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (56.557 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 26.09% β-sheet: 16.30% Coil/Unstructured: 57.61% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.50 |
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Pfam ID | Name | % Frequency in 122 Family Scaffolds |
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PF02465 | FliD_N | 45.08 |
PF07196 | Flagellin_IN | 26.23 |
PF07195 | FliD_C | 5.74 |
PF00700 | Flagellin_C | 2.46 |
PF03646 | FlaG | 1.64 |
PF02561 | FliS | 0.82 |
PF06490 | FleQ | 0.82 |
PF02049 | FliE | 0.82 |
COG ID | Name | Functional Category | % Frequency in 122 Family Scaffolds |
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COG1345 | Flagellar capping protein FliD | Cell motility [N] | 77.05 |
COG1344 | Flagellin and related hook-associated protein FlgL | Cell motility [N] | 28.69 |
COG1256 | Flagellar hook-associated protein FlgK | Cell motility [N] | 26.23 |
COG1516 | Flagellin-specific chaperone FliS | Cell motility [N] | 2.46 |
COG1334 | Uncharacterized conserved protein, FlaG/YvyC family | General function prediction only [R] | 1.64 |
COG1677 | Flagellar hook-basal body complex protein FliE | Cell motility [N] | 1.64 |
COG2204 | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains | Signal transduction mechanisms [T] | 0.82 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 86.89 % |
All Organisms | root | All Organisms | 13.11 % |
Visualization |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 18.85% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 13.93% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 9.02% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 6.56% |
Host-Associated | Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated | 5.74% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 4.92% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 4.92% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 4.10% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.10% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 3.28% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 3.28% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 3.28% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.64% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.64% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 1.64% |
Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 1.64% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.64% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.82% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.82% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 0.82% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.82% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.82% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.82% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 0.82% |
Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 0.82% |
Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 0.82% |
Palsa | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa | 0.82% |
Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.82% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.82% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001546 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 | Environmental | Open in IMG/M |
3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300002917 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm | Environmental | Open in IMG/M |
3300003368 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 | Environmental | Open in IMG/M |
3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004152 | Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3 | Environmental | Open in IMG/M |
3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
3300006638 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A | Environmental | Open in IMG/M |
3300009500 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG | Host-Associated | Open in IMG/M |
3300009628 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 | Environmental | Open in IMG/M |
3300009633 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 | Environmental | Open in IMG/M |
3300009660 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 | Environmental | Open in IMG/M |
3300009709 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG | Host-Associated | Open in IMG/M |
3300009787 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG | Host-Associated | Open in IMG/M |
3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300014159 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG | Environmental | Open in IMG/M |
3300014167 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG | Environmental | Open in IMG/M |
3300014168 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG | Environmental | Open in IMG/M |
3300014490 | Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG | Environmental | Open in IMG/M |
3300014495 | Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG | Environmental | Open in IMG/M |
3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300014654 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG | Environmental | Open in IMG/M |
3300014658 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG | Environmental | Open in IMG/M |
3300014838 | Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300017938 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150 | Environmental | Open in IMG/M |
3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
3300018024 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100 | Environmental | Open in IMG/M |
3300018035 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10 | Environmental | Open in IMG/M |
3300018043 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10 | Environmental | Open in IMG/M |
3300019787 | Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction) | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Host-Associated | Open in IMG/M |
3300025406 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes) | Environmental | Open in IMG/M |
3300025463 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes) | Environmental | Open in IMG/M |
3300025627 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes) | Environmental | Open in IMG/M |
3300027002 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027545 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027652 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes) | Environmental | Open in IMG/M |
3300027660 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027676 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027727 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300027807 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes) | Host-Associated | Open in IMG/M |
3300027860 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes) | Host-Associated | Open in IMG/M |
3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
3300027895 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027905 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes) | Environmental | Open in IMG/M |
3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
3300028146 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23 | Environmental | Open in IMG/M |
3300028742 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3 | Environmental | Open in IMG/M |
3300028747 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2 | Environmental | Open in IMG/M |
3300028808 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2 | Environmental | Open in IMG/M |
3300029882 | III_Palsa_E1 coassembly | Environmental | Open in IMG/M |
3300029911 | III_Bog_N2 coassembly | Environmental | Open in IMG/M |
3300029915 | III_Bog_E1 coassembly | Environmental | Open in IMG/M |
3300029943 | I_Palsa_N3 coassembly | Environmental | Open in IMG/M |
3300029951 | III_Palsa_N1 coassembly | Environmental | Open in IMG/M |
3300029953 | II_Bog_E3 coassembly | Environmental | Open in IMG/M |
3300029999 | I_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300030056 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3 | Environmental | Open in IMG/M |
3300030622 | Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300030626 | Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030738 | Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly | Environmental | Open in IMG/M |
3300030739 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3 | Environmental | Open in IMG/M |
3300030813 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030874 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030970 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 Emin (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
3300031258 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1 | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
3300032067 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22 | Environmental | Open in IMG/M |
3300034124 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12659J15293_101508401 | 3300001546 | Forest Soil | PSLEAQVQLLNKYLNNSGKPDQFRVAPDSDDKLIQQINPANGEVLAEFPASEFAALARSVGISGVTVNKRA* |
JGI12635J15846_106945612 | 3300001593 | Forest Soil | QFRVDPSSDGKLIQQVNPASGEVLGEFSADEFPALARSVGLSGAIVDDHA* |
JGIcombinedJ26739_1010000382 | 3300002245 | Forest Soil | QLLNKYLNNSGKPDQFRVAPDSDDKLIQQINPANGEVLAEFPASEFAALARSVGISGVVVDSRA* |
JGIcombinedJ26739_1011960472 | 3300002245 | Forest Soil | LNDSGRPDEFRVDPASGKLIQQVNPANGVVLGEFAVDEFPALARSVGASGLLIDSLA* |
JGIcombinedJ26739_1012593812 | 3300002245 | Forest Soil | LLNKYVNDSGRPDQFRVAPQADSDLIQEINPATGAVIAEYSATEFPALARSLGISGGLIDSHA* |
JGIcombinedJ26739_1013839431 | 3300002245 | Forest Soil | NDSGRPDQFRLDPSSDGKLIQQINPASGEVIGEFSASEFPALARSVGLSGAIVDNHA* |
JGI25616J43925_100606943 | 3300002917 | Grasslands Soil | VDPSSDDKLIQQINPATGEVVGEFPASEFAALARSVGISGVSLDKHA* |
JGI26340J50214_101422931 | 3300003368 | Bog Forest Soil | DSGRPDQYRVDPQSQSTIQEINPSNGAVIGQFSASEFPALARSVGASGLLFDQLA* |
Ga0062385_102822491 | 3300004080 | Bog Forest Soil | NKYLNDSGRPDQYRVDPSSNDKLIQQINPATGAVIGEFSAAEFPALARSVGFPGGIVDDHA* |
Ga0062385_108116211 | 3300004080 | Bog Forest Soil | YLNDSGKPDQFRVAPNSDDKLIQQINPANGEVLAEFPASEFAALARSVGISGVVVDKLA* |
Ga0062387_1001629062 | 3300004091 | Bog Forest Soil | LLNKYLNNSGKPDQFRVAPDSDDKLIQQVNPANGEVLAEFPASEFAALARSVGISGVVVNKRA* |
Ga0062389_1041064101 | 3300004092 | Bog Forest Soil | LNKYLNDSGKPDQFRVDPSSDDKMIQQINPANGQVIAEFPASEFAALARSVGISGVIVDQHV* |
Ga0062386_1008972351 | 3300004152 | Bog Forest Soil | RPATTSSHAALPALVAQLNKYLNDSGRPDQFRVDPTSRGQTIQEINPATGEVIGEFSAIEFPELAKSLGISGVLVDSLA* |
Ga0062388_1006227371 | 3300004635 | Bog Forest Soil | PDQFRVAPQSDDKLIQEINPANGEVIAEYSASEFAALARSVGISGVLIDSHV* |
Ga0062388_1013145931 | 3300004635 | Bog Forest Soil | LNDSGKPDQFRVAPQSDDKLIQEINPANGEVIAEYPATEFAALARSVGISGVLIDSHV* |
Ga0070713_1004540292 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | LNKHLNDSGRADLYRVDPSSGNKVIQQINPATGDVIGEFSAIEFPALARSVGMSGGALIDSRA* |
Ga0070710_106268441 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | DLYRVDPSSGNKVIQQINPATGDVIGEFSAVEFPALARSVGMLGGGLIDSHA* |
Ga0070762_107261841 | 3300005602 | Soil | NDSGRPDEYRVDPASDAKLIQQINPATGAVIGEFSASEFPALARSVGVSGALIDSHA* |
Ga0070762_109481421 | 3300005602 | Soil | TLLNKFLNDSGRPDQFRVAPDSDDKLIQQINPATGEVVGEFSASEFAALARSVGLSGVLVNSRA* |
Ga0070762_109695361 | 3300005602 | Soil | KYLNDSGRPDEFRVDPASGKLIQQVNPANGVVLGEFSVDEFPALARSVGVSGLLIDSLA* |
Ga0070762_111447041 | 3300005602 | Soil | VAPDSDDKLIQEVNPANGEVIGEYPAAEFAALAKSVGISGVLIDSHV* |
Ga0070764_101172152 | 3300005712 | Soil | DQFRVAPDSDDKLIQQINPANGEVLAEFPASEFAALARSVGISGVTVNKRA* |
Ga0075029_1012121821 | 3300006052 | Watersheds | VAALNKFLNDSGRPNQFRVDPAANTQIQEINPANGAVIGQFSISQFRALAQSIGATSLLVDTHA* |
Ga0075018_108133161 | 3300006172 | Watersheds | VALLNKHLNDSGRPNEYRVDPNSDNKMIQQINPATGEVVGEFLISEFPALARSVGVSGALIDSRA* |
Ga0075522_105319562 | 3300006638 | Arctic Peat Soil | ASAVKSDAAPEKPDLQAQVALLNKYLNDSGRPDQFRVDPSSGSKLIQQINPASGAVIGEFLASEFPALARSVGVSGVLVDSHV* |
Ga0116229_102125711 | 3300009500 | Host-Associated | KFLNDSGRPDEFRVDPTSADYIQQVNPANGAVVAEYSVSEFPALARSVGASGLLIDAIA* |
Ga0116125_11614062 | 3300009628 | Peatland | VASQVAVLNKYLNDSGRPDQFRASADLKSIQEINPATGAVIAEYPSIVFPALARSVGVSGALVDKLA* |
Ga0116129_10836071 | 3300009633 | Peatland | QVALLNKYLNDSGRPDEYRVDPASDARLIQQINPATGAVIGEFSASEFPALARSVGVSGALIDSHA* |
Ga0116129_10973411 | 3300009633 | Peatland | ALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVIGEFSASEFPALARSVGVSGALIDSHA* |
Ga0116129_11081591 | 3300009633 | Peatland | ALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVIGEFSASEFPALARSVGVSGALIDGHA* |
Ga0105854_13141702 | 3300009660 | Permafrost Soil | RPDQYRIDPSSGDKVIQQINPATGDVIGEFSVSEFPALARSVGMPGGGLIDSHA* |
Ga0116227_108533862 | 3300009709 | Host-Associated | LVTFLNQYLNDSGFPDQFRVDPTSVATIQEINPANGKVIAEYPTAEFPALARSVGLVRGLVDGSA* |
Ga0116226_104524503 | 3300009787 | Host-Associated | PDQYRVDPQSANMIQEVNPANGAVIGQFSADEFPALARSVGATGLLIDSLA* |
Ga0116226_105930072 | 3300009787 | Host-Associated | LNKHLNDSGLPDQYRIDPQSSGMIQEINPANGAVIGEFSASEFPSLARTAGALGLLIDSQA* |
Ga0116226_115363532 | 3300009787 | Host-Associated | ASATGSSSNSAKGTTASSADPQTLVNQLNKYLNDSGRSDEFRLDPDSDKYIQQVNPSNGAVVAEYLVSEFPALARSVGASGLLIDAVA* |
Ga0074044_102956322 | 3300010343 | Bog Forest Soil | LQSLIAQLNKYLNDSGRPDQYRVDPQSASMIQEVNPANGAVIAEFAASEFPALARSVGASGLLVDSLA* |
Ga0150983_114701521 | 3300011120 | Forest Soil | NDTGKPDQFRVAPDSDDKLIQQINPANGVVLGVFPVSEFAALARSVGISGAIVNQHA* |
Ga0150983_115633981 | 3300011120 | Forest Soil | PSAGTTDAQTLVAQLNKALNDSGRPDQYRVDPSSNDTMIQQINPSNGAVVGEFLASEFPALARSVGVSGALFDSHA* |
Ga0150983_157203651 | 3300011120 | Forest Soil | RPVLPAKTDLQTQVTLLNKYLNDSGKPDQFRVAPQSDDKLIQEINPANGEVIAEYSASEFAALARSVGISGVLIDSHV* |
Ga0137362_110147731 | 3300012205 | Vadose Zone Soil | NQFRVDPNSDHKLIQQINPATGEVVGEFLISEFPALARSVGVSGVLVDSRA* |
Ga0137413_103999071 | 3300012924 | Vadose Zone Soil | VNFLNKYLNDSGRPAQFRVDPTSGNKVIQEINPANGEVIAEYSATEFAALARSVGISGAIVDHHA* |
Ga0181530_101518772 | 3300014159 | Bog | LNKYLNDSGRPDQYRVDPQSENTIQEVNPANGAVIGQFAASEFPALARSVGASGVLVDTLA* |
Ga0181528_104045322 | 3300014167 | Bog | LNKYLNDSGRPDQFRLAPEPNSTLIQQINPASGAVIAEYSAAEFPVLARSTGATATGTVFDSTA* |
Ga0181534_107318272 | 3300014168 | Bog | LVDLLNRNLNDSGRPDQFRVDPGSNDKLIQQINPANGEVIGQFPVSEFPALARSIGVSGLLVDSLA* |
Ga0182010_105449581 | 3300014490 | Fen | KHLNDSGRPDQFRVAPASDGKIIQQINPSTGEIVGQFSASEFPTLARSVGASGLLFDSRA |
Ga0182015_102885572 | 3300014495 | Palsa | LPQSGNAATGAAAHRTPAAAKPDLQAQVALLNKYLNESGRPDQFRVAPQADANLIQEINPATGEVIAEYSATEFPALARSLGVSGGLIDSHA* |
Ga0182024_119333892 | 3300014501 | Permafrost | DSGRPDQFRVVPTSDNKLIQQINPATGAVIAEYSVTEFPELARSVGVSGIIIDNLA* |
Ga0181525_101828061 | 3300014654 | Bog | GRPDQFRMAPSSDGKIIQQVNPSTGEIVGQFSASEFPALARSVGASGLLFDSRA* |
Ga0181519_106519072 | 3300014658 | Bog | GRPDLFRVDPTSGSKLIQQINPATGAVVGEFLASEFPALARSVGVSGVLVDSHV* |
Ga0182030_102045952 | 3300014838 | Bog | VIKTPVPQTTDPQSLVRNLNKFLNDSGRPDQFRLDPASGGKLIQQINPSSGAVIGEFSATEFPALARSVGVAGLLVDDLA* |
Ga0187854_104442442 | 3300017938 | Peatland | ATSQPSLQSLIAQLNKYLNDSGRPDQYRVDPQSASMIQEVNPANGAVIAEFAASEFPALARSVGASGLLVDSLA |
Ga0187817_100379337 | 3300017955 | Freshwater Sediment | LNNYLNESGRPDLFRLAPNSGGKLIQQVNPATGEVIGEFPVSEFPALARSVGASSLLVDSLA |
Ga0187881_104630112 | 3300018024 | Peatland | DPRSLVQNLNKFLNDSGRPDQFRLDPASGGKLIQQINPATGAVIGEFSATEFPALARSVGVAGLLVDSLA |
Ga0187875_105961533 | 3300018035 | Peatland | LNDSGRPDQYRVDPQSASMIQEVNPANGAVIAEFAASEFPALARSVGASGLLVDSLA |
Ga0187887_101106921 | 3300018043 | Peatland | RPDQFRVAPSSDNKLIQELNPANGEVIAEYSATEFAALARSLGISGALVDGHA |
Ga0182031_10891342 | 3300019787 | Bog | PDQFRVAPASDGKIIQQINPSTGEIVGQFSASEFPTLARSVGASGLLFDSRA |
Ga0210403_101102654 | 3300020580 | Soil | VDPTSDNKLIQEVNPATGEVIGEYSATEFAALARSVGISGVLLNTHA |
Ga0210395_108270902 | 3300020582 | Soil | PDQFRVAPNSDDKLIQQINPANGEVLAEFPASEFAALARSVGISGVVVDKLA |
Ga0210406_104062552 | 3300021168 | Soil | RVAPDSDGKLIQEVNPANGEVLGEFPASEFAALARSVGISGVIVDQHA |
Ga0210400_103054361 | 3300021170 | Soil | APDSDGKLIQEVNPANGEVLGEFPASEFAALARSVGISGVIVDQHA |
Ga0210400_116302621 | 3300021170 | Soil | GRPDEFRVDPASSNKLILQINPANGAVLGEFSVEEFPALARSVGASGLLIDSLA |
Ga0210393_115758712 | 3300021401 | Soil | KPDQFRVDPDSGGRLIQQVNPANGEVIAEFPASEFAALARSVGISGVIVDKHA |
Ga0210393_116313581 | 3300021401 | Soil | LLNKFLNDSGRPDQFRVDPTSDNKLIQEINPATGKVIGEFSAVEFAELARSVGISGALVDSHA |
Ga0210387_102602271 | 3300021405 | Soil | PRTDPQALVDLLNKNLNDSGQPDQFRVDPASNEFIQQINPANGAVVGQFSIAEFPALARSVGASGGIVDDRA |
Ga0210383_108410101 | 3300021407 | Soil | PDQFRVAPDSDDKLIQQVNPANGEVLAEFPASEFAALARSVGISGVVVDKRA |
Ga0210384_103380002 | 3300021432 | Soil | SGKPDLFRVAPDSDDKLIQQINPATGQVVGEFSASEFAALARSLGISGVLVNSRA |
Ga0210391_102079901 | 3300021433 | Soil | ASQPNLQAQVALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVVGEFSASEFPALARSVGVSGALIDSHA |
Ga0210391_114319082 | 3300021433 | Soil | KYLNNSGKPDQFRVAPDSDDKLIQQINPANGEVIGEFPVSEFAALARSVGISGVLIDQHA |
Ga0210390_113215872 | 3300021474 | Soil | DPQALVAQLNKYLNDSGRPDEFRVDPASGKLIQQVNPANGAVLGEFSVEEFPALARSVGASGLLIDSLA |
Ga0210392_100182086 | 3300021475 | Soil | SGRPDEFRVDPASGKLIQQVNPANGVVLGEFSVDEFPALARSVGASGLLIDSLA |
Ga0210392_114775231 | 3300021475 | Soil | LNKVLNNSGRADQFRVDPSSDKYIQQVNPASGDVIAEYSVDEFPALARSIGASGLLIDET |
Ga0210410_107669371 | 3300021479 | Soil | LLNKYLNDSGRPDQFRVDPASNGKLIQQINPATGAVVGELPADEFEALARSVGISGVIVDKHA |
Ga0210409_114944631 | 3300021559 | Soil | PATADKAAATTGNTDLQNQVTFLNKFLNDSGKPDLFRVAPDSDDKLIQQINPATGQVVGEFSASEFAALARSLGISGVLVNSRA |
Ga0228598_10667452 | 3300024227 | Rhizosphere | PALPATDAQSLVAALNKNLNDSGRPDQYRVAPQSDDKVIQQVNPATGEVVGQFSVSEFPALARSVGVAGVLIDSHV |
Ga0208035_10578082 | 3300025406 | Peatland | VAQLNKYLNDSGRPDQYRVDPQSGSMIQEINPANGAVIAEFAASEFPALARSVGASGLLVDSLA |
Ga0208193_10320322 | 3300025463 | Peatland | VALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVIGEFSASEFPALARSVGVSGALIDGHA |
Ga0208220_10618252 | 3300025627 | Arctic Peat Soil | VQLLNKYLNDSGKPDQFRVAPDSDDKLIQQVNPANGEVLAEFPASEFAALARSVGISGVVIDKRA |
Ga0209110_10279181 | 3300027002 | Forest Soil | LNDSGKPAQFRVAPGSDEKTIQEINPANGEVLAEFPASEFAALARSVGISGVIVDNRA |
Ga0209008_11007152 | 3300027545 | Forest Soil | PSLQAQVQLLNKYLNNSGKPDQFRVAPDSDDKLIQQINPANGEVLAEFPASEFAALARSVGISGVTVNKRA |
Ga0209007_11499512 | 3300027652 | Forest Soil | DAQTLVAQLNKALNDSGRPDQYRVDPSSNDKMIQQINPANGAVVGEFLASEFPALARSVGVSGALFDSHA |
Ga0209736_10262483 | 3300027660 | Forest Soil | DSGKPDQFRIAPDSDNKLIQQINPANGDVIGEFPVSEFAALARSVGISGVLVDQHA |
Ga0209333_11797132 | 3300027676 | Forest Soil | SGRPDQYRVDPSSNDKMIQQINPANGAVVGEFLATEFPALARSVGVSGALFDSHA |
Ga0209328_100782331 | 3300027727 | Forest Soil | FRVDPASDGKLIQEINPATGEVIGEFSATEFVALARSVGISGVLVNRLA |
Ga0209208_100131321 | 3300027807 | Host-Associated | ATPVETLVTQLNKTLNDSGRPDQYRVDPQSANTIQEVNPANGEVIGQFSAEEFPALARSVGATGLLVDSLA |
Ga0209611_101318241 | 3300027860 | Host-Associated | VNKFLNDSGRPDEFRVDPTSADYIQQVNPANGAVVAEYSVSEFPALARSVGASGLLIDAI |
Ga0209167_102483821 | 3300027867 | Surface Soil | PDQFRVAPDSDNKLIQQVNPANGEVLGEFPASEFAALARSVGISGVVVDKRA |
Ga0209275_108464661 | 3300027884 | Soil | AAPRPDLQAQVALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVIGEFSASEFPALARSVGVSGALIDSHA |
Ga0209624_101452912 | 3300027895 | Forest Soil | KYLNNSGKPDQFRVAPDSDDKLIQQINPANGEVLAEFPASEFAALARSVGISGVTVNKRA |
Ga0209415_102171422 | 3300027905 | Peatlands Soil | VLVEQLNKFLNDSGRPDQFRLDPASGGKLIQQINPATGAVVGEFSATEFPALARGVGVSGLLVDRLA |
Ga0209006_102193122 | 3300027908 | Forest Soil | FRLDPSSDGKLIQQINPASGEVIGEFSASEFPALARSVGLSGAIVDNHA |
Ga0247682_10036075 | 3300028146 | Soil | QLNKHLNDSGRPDQYRVDPSSGNKVIQQINPATGDVIGEFSAIEFPALARSVGISGGALIDSRA |
Ga0302220_103202202 | 3300028742 | Palsa | PDLQAQVALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVVGEFSASEFPALARSVGVSGALIDRHA |
Ga0302219_102134341 | 3300028747 | Palsa | KNAAAAPQPDLQAQVALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVVGEFSASEFPALARSVGVSGALIDRHA |
Ga0302228_102951791 | 3300028808 | Palsa | GKSLPQSGNSAVEAAKNAAAAPQPDLQAQVALLNKYLNDSGRPDEYRVDPASDAKLIQQINPATGAVVGEFSASEFPALARSVGVSGALIDRHA |
Ga0311368_103491702 | 3300029882 | Palsa | ALVDLLNKNLNDSGQPDQFRVDPASNELIQQINPANGAVVGQFSIDEFPALARSVGASGGIVDDLA |
Ga0311361_104246654 | 3300029911 | Bog | QTLAAQLNKHLNDSGRPDQYRVDPQSGTMIQEVNPATGAVIGEFAASEFPTLARSVGASGLLINSLA |
Ga0311358_101656363 | 3300029915 | Bog | KATVPAIPSVPTQVALINKYLNDSGRPDQFRVDPGSNDKLIQELNPANGEVIAEYSATEFAALARSLGISGVLVDGHA |
Ga0311340_107389252 | 3300029943 | Palsa | GLPDQFRVDPDSASYIQQVNPATGAVVAQYLASEFPALARSVGASGLLIDDTA |
Ga0311371_104297941 | 3300029951 | Palsa | TQLNKHLNDSGRPDQFRLDPSNGKMIQQLNPASGAVIGEFSATEFPALARSVGVSGLLIDSLA |
Ga0311343_102788092 | 3300029953 | Bog | DVRNLVAQLNKSLNDSGRPDQFRVDPQSGSTIQEVNPANGAVIAQFAASEFPALARSVGASGLLFDSRA |
Ga0311339_116120431 | 3300029999 | Palsa | QSDPQSLVDQANKYLNDSGLPDQFRVDPDSASYIQQVNPATGAVVAQYLASEFPALARSVGASGLLIDDTA |
Ga0302181_102284221 | 3300030056 | Palsa | PDSDDKLIQQVNPANGEVIAEFPASEFAALARSVGISGVVVDKLA |
Ga0265391_101551121 | 3300030622 | Soil | NNSGKPDQFRVAPDSDDKLIQQINPANGEVLAEFPASEFAALARSVGISGVVVDKRA |
Ga0210291_115043861 | 3300030626 | Soil | QFRVAPDSDDKLIQQINPANGEVLSEFPASEFAALARSVGISGVVVDKRA |
Ga0265462_124514162 | 3300030738 | Soil | TPDPQTLVDQLNKNLNDSGRADQFRVDPDSDSYIQQVNPASGAVIAQYAVSEFPALARSIGASGLLVDEVA |
Ga0302311_100339061 | 3300030739 | Palsa | PDQFRVDPASNELIQQINPANGAVVGQFSIDEFPALARSVGASGGIVDDLA |
Ga0302311_106855611 | 3300030739 | Palsa | RPDQYRVDPSSDAKLIQQINPATGEVIGEFLASEFPALARSVGVSGVLIDSHV |
Ga0265750_10570971 | 3300030813 | Soil | QLLNKYLNNSGKPDQFRVAPDSDDKLIQQVNPANGEVVAEFPASEFAALARSVGISGVIVDSRA |
Ga0265742_10001171 | 3300030874 | Soil | DDPKALVALLNKYLNDSGRPDQFRVAPASGDKLIQQINPANGEVIGEFSASEFPALARSVGASGLVVDSRA |
Ga0075381_106028932 | 3300030970 | Soil | RAQVALLNKYLNDSGKPDQFRVDPSSDDKLIQQINPATGEVVGEFPTSEFAALARSVGISGVVVDQHA |
Ga0265760_101815171 | 3300031090 | Soil | LNKALNDSGRPDQYRVDPSSNDKMIQQINPANGAVVGEFLATEFPALARSVGVSGALFDSHA |
Ga0170824_1061999171 | 3300031231 | Forest Soil | DLQAQVQLLNKYLNDSGKPDQFRVAPNSDDKLIQQVNPANGEVIAEFPASEFAALARSVGISGVVLDKHA |
Ga0170824_1177375582 | 3300031231 | Forest Soil | QLNKHLNDSGRPDQYRIDPSSSNKVIQQINPATGDVIGEFSALEFPALARSVGMSGGALIDSHA |
Ga0170824_1182908661 | 3300031231 | Forest Soil | SLVSQLNKVLNDSGRPDQYRVDPASGGKLIQQVNPATGAVIGEFSAEEFPALARGVGAAGLFIDSLA |
Ga0170824_1251699872 | 3300031231 | Forest Soil | LINPDSDGKLIQQINPANGEVVGEFPASEFAALARSVGISGVVVDKHA |
Ga0302325_129186972 | 3300031234 | Palsa | AATETPASAASRNNAAALRSVDPQALVDQLNKYLNDSAYPDQFRVAPDSGGKLIQQINPANGAVLGEFSASEFPALARSVAASGLLVDSLV |
Ga0302318_103720251 | 3300031258 | Bog | QFRVDPRSSTTIQEVNPATGVVVGQFAASEFPALARSVGASGLLFDSRA |
Ga0310686_1012676031 | 3300031708 | Soil | LNDSGRPDQFRVDPSSGSKLIQQINPASGAVIGEFLASEFPALARSVGVSGVLVDSHV |
Ga0310686_1181480161 | 3300031708 | Soil | ATKLAADRAADPQRLVAQLNKYLNDSGRPDEFRVDPASGKLIQQVNPANGAVLGEFSVEEFPALARSVGASGLLIDSLA |
Ga0307476_110493881 | 3300031715 | Hardwood Forest Soil | VPPVRATDPQTVVTALNNFLNTSGRPDQFRIAPGSGNKLIQQVNPATGEVVGEFPVDEFPALARGIGATGLLINSLA |
Ga0318524_106988832 | 3300032067 | Soil | NKHLNDSGRPDQYRMDPSSDNKVIQQINPASGDVIGEFSALEFPLLARAVGMTGGALIDEQA |
Ga0370483_0199659_3_227 | 3300034124 | Untreated Peat Soil | AGASDPQTLVNLLNRYLNDSGRPDQFRVDPASSGKLIQQVNPENGAVIGEFSASEFPALARSVGASGLLVDSLA |
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