Metagenome Family F071684

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071684
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	76 residues
Representative Sequence	MHVSARVRVAAVLGGALLTLAACGGGSAARGRTPAAAGPPPEVLKPLEVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR
Number of Associated Samples	90
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.11 %
% of genes near scaffold ends (potentially truncated)	7.38 %
% of genes from short scaffolds (< 2000 bps)	28.69 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.475 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (36.885 % of family members)
Environment Ontology (ENVO)	Unclassified (68.033 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.770 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.52% β-sheet: 5.06% Coil/Unstructured: 73.42%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00005	ABC_tran	37.70
PF04216	FdhE	28.69
PF00528	BPD_transp_1	4.92
PF03916	NrfD	3.28
PF02652	Lactate_perm	0.82
PF01878	EVE	0.82
PF13247	Fer4_11	0.82
PF01568	Molydop_binding	0.82
PF02374	ArsA_ATPase	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3058	Formate dehydrogenase maturation protein FdhE	Posttranslational modification, protein turnover, chaperones [O]	28.69
COG1620	L-lactate permease	Energy production and conversion [C]	0.82
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.82
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
All Organisms	root	All Organisms	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
cellular organisms	root	All Organisms → cellular organisms	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	7.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Limnochordia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	7.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Limnochordales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	7.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Limnochordaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	7.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Limnochorda	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae → Limnochorda	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	7.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Limnochorda pilosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae → Limnochorda → Limnochorda pilosa	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Sphaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter	7.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Limnochorda pilosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae → Limnochorda → Limnochorda pilosa	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	7.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.46 %
Limnochorda pilosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae → Limnochorda → Limnochorda pilosa	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005166\|Ga0066674_10007913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	4289	Open in IMG/M
3300005174\|Ga0066680_10016819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	3915	Open in IMG/M
3300005175\|Ga0066673_10252121	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005180\|Ga0066685_10176235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	1461	Open in IMG/M
3300005406\|Ga0070703_10183216	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300005434\|Ga0070709_10001697	All Organisms → cellular organisms → Bacteria	11976	Open in IMG/M
3300005436\|Ga0070713_100805621	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300005440\|Ga0070705_100465630	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005445\|Ga0070708_100450743	All Organisms → cellular organisms → Bacteria → Proteobacteria	1214	Open in IMG/M
3300005446\|Ga0066686_10803457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	626	Open in IMG/M
3300005451\|Ga0066681_10026398	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300005552\|Ga0066701_10544450	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005553\|Ga0066695_10026460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	3312	Open in IMG/M
3300005555\|Ga0066692_10015445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	3747	Open in IMG/M
3300005586\|Ga0066691_10440854	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300006163\|Ga0070715_10598091	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006173\|Ga0070716_100140691	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300006755\|Ga0079222_10054772	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300006755\|Ga0079222_10253130	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300006791\|Ga0066653_10071687	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300006854\|Ga0075425_102194732	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300006954\|Ga0079219_10056305	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300010304\|Ga0134088_10591053	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300010325\|Ga0134064_10351041	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010337\|Ga0134062_10009694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	3523	Open in IMG/M
3300012206\|Ga0137380_10538132	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300012285\|Ga0137370_10881471	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300012977\|Ga0134087_10065154	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300014154\|Ga0134075_10175176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	920	Open in IMG/M
3300017656\|Ga0134112_10523120	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300018431\|Ga0066655_10102061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	1610	Open in IMG/M
3300018431\|Ga0066655_11355657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	514	Open in IMG/M
3300018482\|Ga0066669_10013146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	4328	Open in IMG/M
3300024182\|Ga0247669_1000075	All Organisms → cellular organisms → Bacteria	52352	Open in IMG/M
3300025885\|Ga0207653_10074365	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300025928\|Ga0207700_10733709	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300025939\|Ga0207665_10165471	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300026310\|Ga0209239_1105908	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300026323\|Ga0209472_1049022	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300026343\|Ga0209159_1047851	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300026548\|Ga0209161_10039482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae → Limnochorda → Limnochorda pilosa	3180	Open in IMG/M
3300027765\|Ga0209073_10140781	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300027775\|Ga0209177_10499957	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031720\|Ga0307469_10159722	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300031720\|Ga0307469_10184499	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300032174\|Ga0307470_10159524	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300032180\|Ga0307471_100031008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	4120	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.18%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.52%
Loam	Environmental → Terrestrial → Soil → Loam	10.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	59.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	36.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	22.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100237363	3300002558	Grasslands Soil	MYLRIPLRLAVVLSATFLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVSLAKPPDTTAHVRKPRS*
JGI25385J37094_100318623	3300002558	Grasslands Soil	MHGSARVRVAAVLGGALLTLVACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQADTTAHARKPRR*
JGI25385J37094_100413351	3300002558	Grasslands Soil	PVRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVLKPLLVPPSPYYIIYSPPVNLAKPPDTTAHVRKPRG*
JGI25385J37094_100698673	3300002558	Grasslands Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAVGPPPEVVKQMQVPQSPYYIIYYPPVNLAKQPDTTAQRRKPRS*
JGI25385J37094_102216671	3300002558	Grasslands Soil	GEHMHVSARVRVAVVLGGALLTLAACSGGSAARGRTPVAAGPPPEVVKQMQVPPSPYYIIYSPPVNLAKQPDTTAQRRKPRS*
JGI25384J37096_100828832	3300002561	Grasslands Soil	MYFRVRVPVRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVLKPLLVPPSPYYIIYSPPVNLAKPPDTTAHVRKPRG*
JGI25384J37096_100883282	3300002561	Grasslands Soil	MHVSARVRVAVVLGGALLTLAACSGGSAARGRTPVAAGPPPEVVKQMQVPPSPYYIIYSPPVNLAKQPDTTAQRRKPRS*
JGI25384J37096_101327133	3300002561	Grasslands Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAAGPPPEVVKQMQVPQSPYYIIYYPPVNLAKQPDTTAQRRKPRS*
JGI25382J37095_100258953	3300002562	Grasslands Soil	MYFLRIPLRLAVVLSATXLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVSLAKPPDTTAHVRKPRS*
JGI25382J37095_101528851	3300002562	Grasslands Soil	FRVRVPVRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVLKPLLVPPSPYYIIYSPPVNLAKPPDTTAHVRKPRG*
JGI25382J43887_100422583	3300002908	Grasslands Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAXGPPPEVVKQMQVPQSPYYIIYYPPVNLAKQPDTTAQRRKPRS*
JGI25382J43887_102772992	3300002908	Grasslands Soil	FRVRVPVRLAVVLSATCLGLAACRGGAARGRAARAAVPPPEVLKPLLVPPSPYYIIYSPPVNLAKPPDTTAHVRKPRG*
JGI25386J43895_101096422	3300002912	Grasslands Soil	SARVRVAAVLGGALLTLVACGGGSAARGRTPAAXGPPPEVVKQMQVPQSPYYIIYYPPVNLAKQPDTTAQRRKPRS*
Ga0066674_100079133	3300005166	Soil	MDGGARIRVAVITGSLLLFVGCGRSARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS*
Ga0066674_100400062	3300005166	Soil	MYLRIPLRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVSLAKPPDTTAHVRKPRS*
Ga0066672_100509493	3300005167	Soil	MHVSARVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPTPEAVKQMQVPQSPYYIIYSPPVNLAKQPDTTAQRRKPRS*
Ga0066672_109982962	3300005167	Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAAGPPPEVVKQMQVPQSPYYIIYYPPVNLAKQ
Ga0066680_100168193	3300005174	Soil	MHVAQIRVAILSSILVTIVACGGAARRQAAPAGPPPEVVKALQVPESPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0066680_108961082	3300005174	Soil	MHVSARVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPTPEAVKQMQVPQSPYYIIYSPPVNLAKEPDTTAQRRKPRS*
Ga0066673_102521213	3300005175	Soil	MDGGARIRVAVITGSLLLFVGCGRSARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDT
Ga0066688_100456141	3300005178	Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPGAAGPPPEVVKQMQVPQSPYYIIYNPPVNLAKQPDTTAQRRKPRS*
Ga0066685_101762353	3300005180	Soil	VKDPNTGRSQGETMHVAQIRVAILSSILVTIVACGGAARRQAAPAGPPPEVVKALQVPESPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0066678_102644392	3300005181	Soil	MHGSARVRVAAVLGGALLTLAACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR*
Ga0070703_101832161	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSQIRVAILTGILMTIVACGGVARRQAAPAGPPPDVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0070709_100016975	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSQIRVAILTGILMTMVACGGAARRQAEPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0070713_1008056212	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSQIRVAILTGILMTIVACGGAARRQAAPAGPPPDVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0070705_1004656303	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSQIRVAILTGILMTMVACGGAARRQAEPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPR
Ga0070708_1004507433	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSQIRVAIVTGILVTIVACGGATRRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPKS*
Ga0070708_1006375921	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFARAQVAVVLGGTILTLLACGRDRNVAAGAAGPPPEVLKPLQVAPSPYYIIYSPPVNLAKPPDTTAHARKPRS*
Ga0066686_103611033	3300005446	Soil	MHGSVRVRVAAVLGGALLTLAACSGGGAARGRTPAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR*
Ga0066686_108034571	3300005446	Soil	MHVSQIRVAILTGILVTIVACGGVARRQAAPAGPPPEVVKALQVPESPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0066689_103399472	3300005447	Soil	MHVSRHVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPTPEAVKQMQVPQSPYYIIYSPPVNLAKEPDTTAQRRKPRS*
Ga0066681_100263984	3300005451	Soil	MDGGARIRVAVITGSLLLLVGCGRGARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS*
Ga0070699_1001070422	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFARAQVAVVLGGTILTLLACGRDRKVAAGAAGPPPDVLKPLQVAPSPYYIIYSPPVNLAKPPDTTAHARKPRS*
Ga0066701_105444502	3300005552	Soil	MHVGARMQVAVLSGALLTLVACGGKAARGRAAYSGAPPEVLKPLQVPESPYYLIYSPPVNLAKPPDTTAHGRKPRS*
Ga0066695_100264605	3300005553	Soil	MDGGARIRVAVITGSLLLFVGCGRSARGPAMAGSPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPR
Ga0066692_100154456	3300005555	Soil	MDGGARIRVAVITGSLLLLVGCGRSARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS*
Ga0066692_103545942	3300005555	Soil	MHVSARVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPTPEAVKQMQVPQSPYYIIYSPPVSLAKQPDTTAQRRKPRS*
Ga0066707_101696551	3300005556	Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAAGPPPEVVKQMQVPQSPYYIIYYPPVNLAKQPDTTAQ
Ga0066704_110129532	3300005557	Soil	MHVSARVRVAAVLGGALLTLAACSGGRAARGRTPAAAGPPPEAVKQMQVPQSPYYIIYSPPVSLAKQPDTTAQRRKPRS*
Ga0066700_107121692	3300005559	Soil	MYLRIPLRLAVVLSATFLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVNLAKPPDTTAHVRKPRG*
Ga0066691_104408542	3300005586	Soil	MHVAQIRVAILSSILVTIVACGGAARRQAAPAGPPPEVVKALQVPESPYYLIYSPPVSLAKPPDTTAHSRKPRS*
Ga0066706_103102912	3300005598	Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAAGPPPEVVKQMQVPQSPYYIIYSPPVNLAKQPDTTAQRRKPRS*
Ga0070715_105980912	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSQIRVAILTGILMTIVACGGAARRQAAPAGPPPDVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARK
Ga0070716_1001406912	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSHIRVAILTGILMTIVACGGAARRQAAPAGPPPDVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0079222_100547723	3300006755	Agricultural Soil	MHVSQIRVAILTGILMTIVACGGAARRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0079222_102531302	3300006755	Agricultural Soil	MHVSQIRVAILTGILVTIVACGGAPRRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPKS*
Ga0066653_100218663	3300006791	Soil	MHGSARVRVAAVLGGALLTLAACSGGGAARGRTPAAAGPPPQVLKPLQVPPSPYYIIYSPPVNLAKQADTTAHARKPRR*
Ga0066653_100716873	3300006791	Soil	MDGGARIRVAVITGSLLLLVGCGRGARGRAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS*
Ga0066665_100837933	3300006796	Soil	MHGSARVRVAAVLGGALLTLVACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR*
Ga0066659_100351034	3300006797	Soil	MHGSARVRVAAVLGGALLTLAACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQADTTAHARKPRR*
Ga0075425_1021947322	3300006854	Populus Rhizosphere	NTGRSQGETMHVPQIRVAILTGSLITIVACGGAARHQATPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS*
Ga0079219_100563052	3300006954	Agricultural Soil	MHVSQIRVAILTGILVTIVACGGAPRRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPKT*
Ga0066710_1023855671	3300009012	Grasslands Soil	MHVRAPVPMSVILSGTFLTLAACGGGSAARGRGARAAGPPPEVVKPLLVPPSPYYIIYSPPVNLAKPPDTTAHG
Ga0099827_100418355	3300009090	Vadose Zone Soil	MHVSARVRVAAVLGGALLTLAACGGGSAARGRTPAAAGPPPEVLKPLEVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR*
Ga0134088_105002722	3300010304	Grasslands Soil	MHGSARVRVAAVLGSALLTLAACSGGGAARGRTPAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQADTTAHARKPRR*
Ga0134088_105910532	3300010304	Grasslands Soil	MQVAVLSGALLTLVACGGKAARGRAAYSGAPPEVLKPLQVPESPYYLIYSPPVNLAKPPDTTAHGRKPRS*
Ga0134064_103510412	3300010325	Grasslands Soil	MDGGARIRVAVITGSLLLFVGCGRSARGPAMAGSPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS*
Ga0134062_100096944	3300010337	Grasslands Soil	MDGGARIRVAVITGSLLLFVGCGRGARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS*
Ga0137383_100074563	3300012199	Vadose Zone Soil	MYLRIPLRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVVKPLLVPPSPYYIIYSPPVNLAKPPDTTAHVRKPRG*
Ga0137399_101560773	3300012203	Vadose Zone Soil	MHVSARVRVTGVLGGALLTLAACSGGGAARGRTPAAAGPPPEAVKQMQVPQSPYYIIYYPPVNLAKQPDTTAQRRKPRS*
Ga0137399_113631511	3300012203	Vadose Zone Soil	MHIGPRIRLAVGGGMFLAVLACRGGGARTPAAAAGPPPEVLKPLQVPASPYYLIYSPPVSLAKPPDTAAHGRKPRS*
Ga0137380_104411811	3300012206	Vadose Zone Soil	MYLRIPLRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVVKPLLVPPSPYYIIYSPPVNLAKPPDTT
Ga0137380_105381322	3300012206	Vadose Zone Soil	MHVGARMQVAVLSGALLTLLACGGKAARGRAGYTGAPPEVLKPLQVPESPYYLIYSPPVNLAKPPDTTAHGRKPRS*
Ga0137379_100126507	3300012209	Vadose Zone Soil	MHGSARVRVAAVLGGALLTLAACSGGGAARGRTPAAAGPPPEVVKQMQVPASPYYIIYSPPVNLAKQPDTTAHARKPRR*
Ga0137377_102195104	3300012211	Vadose Zone Soil	MHGSARVRVAAVLGGALLTLAACSGGGAARGRTPAAAGPPPEVVKQMQVPASPYYIIYSPPVNLAKQPDT
Ga0137370_108814712	3300012285	Vadose Zone Soil	MDGGARIRVAVIIGSLLLLVGCGRGARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS*
Ga0137387_103507102	3300012349	Vadose Zone Soil	MQLAVLNSALLTLLACGGTAARGRAGYTGAPPEVLKPLQVPESPYYIIYSPPVNLAKPPDTTAHGRKPRS*
Ga0137396_100635684	3300012918	Vadose Zone Soil	MHVSARVRVAGVLGGALLTLAACSGGGAARGRTPAAAGPPPEAVKQMQVPQSPYYIIYYPPVNLAKQPDTTVQRRKPRS*
Ga0137416_104215922	3300012927	Vadose Zone Soil	MHVSARVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQPDTTAQRRKPRS*
Ga0134076_100181392	3300012976	Grasslands Soil	MHGSARVRVAAVLGGALLTLAACSGGGAARGRTPAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR*
Ga0134087_100651542	3300012977	Grasslands Soil	MDGVARIRVAVITGSLLLLVGCDRGARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS*
Ga0134075_100498712	3300014154	Grasslands Soil	MHGSARVRVAAVLGGALLTLAACSGGGAARGRTPAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQADTTAHARKPRR*
Ga0134075_101751763	3300014154	Grasslands Soil	MHVGARIPVAGLSTLLLTLVACGGHPRGRAAAAAGPPPEVVKPMLVPPSPYYIIYSPPVNLAKPPDTTSHGRKPGR*
Ga0134089_102522682	3300015358	Grasslands Soil	MHGSARVRVAAVLGGALLTLAACSGGGAARGRTPAAAGPPPEVLKPLQVPPSPYYIIYSPPVTLAKQPDTTAHARKPRR*
Ga0134085_100542321	3300015359	Grasslands Soil	MHGSVRVRVAAVLGGALLTLVACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQADTTAHARKPRR*
Ga0134112_105231202	3300017656	Grasslands Soil	LSSILVTIVACGGAARRQAAPAGPPPEVVKALQVPESPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0066655_100007615	3300018431	Grasslands Soil	MYLRIPLRLAVVLSATFLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVSLAKPPDTTAHVRKPRS
Ga0066655_100217413	3300018431	Grasslands Soil	MHGSARVRVAAVLGGALLTLVACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQADTTAHARKPRR
Ga0066655_101020611	3300018431	Grasslands Soil	MHVAQIRVAILSSILVTIVACGGAARRQAAPAGPPPEVVKALQVPESPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0066655_113556571	3300018431	Grasslands Soil	MDGGARIRVAVITGSLLLFVGCGRSARGPAMAGSPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS
Ga0066667_102242993	3300018433	Grasslands Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAAGPPPEVVKQMQVPQSPYYIIYYPPVNLAKQPDTTAQRRKPRS
Ga0066669_100131462	3300018482	Grasslands Soil	MDGGARIRVAVITGSLLLFVGCGRSARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS
Ga0247669_100007540	3300024182	Soil	MHVSQIRVAILTGILVTLVACGGAARRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0207653_100743652	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSQIRVAILTGILMTIVACGGVARRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0207700_107337092	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSQIRVAILTGILMTIVACGGAARRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0207665_101654713	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MHVSHIRVAILTGILMTIVACGGAARRQAAPAGPPPDVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0209235_10370451	3300026296	Grasslands Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAVGPPPEVVKQMQVPQSPYYIIYYPPVNLAKQPDTTAQRRKPRS
Ga0209235_10440013	3300026296	Grasslands Soil	MHVSARVRVAVVLGGALLTLAACSGGSAARGRTPVAAGPPPEVVKQMQVPPSPYYIIYSPPVNLAKQPDTTAQRRKPRS
Ga0209236_10363405	3300026298	Grasslands Soil	MHVSARVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPTPEAVKQMQVPQNPYYIIYSPPVNLAKQPDTTAQRRKPRS
Ga0209236_11144891	3300026298	Grasslands Soil	MYFRVRVPVRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVLKPLLVPPSPYYIIYSPPVNLAKPPDTTAHVRKPRG
Ga0209238_11802922	3300026301	Grasslands Soil	FRVRVPVRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVSLAKPPDTTAHVRKPRS
Ga0209239_11059081	3300026310	Grasslands Soil	MDGGARIQVAVITGSLLLLVGCGRGARGPAMAGSPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS
Ga0209761_10336763	3300026313	Grasslands Soil	MHVSARVRVAAVVLGGALLTLAACSGGSAARGRTPAAAGPPPEAVKQMQVPQSPYYIIYSPPVNLAKQPDTTAQRRKPRS
Ga0209268_11599682	3300026314	Soil	MHGSARVRVAAVLGGALLTLVACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNL
Ga0209154_10844703	3300026317	Soil	MHVSARVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPTPEAVKQMQVPQSPYYIIYSPPVNLAKQPDTTAQRRKPRS
Ga0209472_10490223	3300026323	Soil	MDGGARIRVAVITGSLLLLVGCGRGARGPAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS
Ga0209470_10016748	3300026324	Soil	MYLRIPLRLAVVLSATCLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVSLAKPPDTTAHVRKPRS
Ga0209801_11604872	3300026326	Soil	MHGSARVRVAAVLGGALLTLAACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR
Ga0209803_12244442	3300026332	Soil	MHGSARVRVAAVLGGALLTLAACSGGGAARGRTPAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQPDTTAHARKPRM
Ga0209158_10097217	3300026333	Soil	MHVSARVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPTPEAVKQMQVPQSPYYIIYSPPVNLAKEPDTTAQRRKPRS
Ga0209377_10274872	3300026334	Soil	MYLRIPLRLAVVLSATFLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVNLAKPPDTTAHVRKPRS
Ga0209057_10017162	3300026342	Soil	MYLRIPLRLAVVLSATFLVPPPEVVKPLLVPDSPYYIIYSPPVSLAKPPDTTAHVRKPRS
Ga0209159_10478512	3300026343	Soil	MDGGARIRVAVITGSLLLLVGCGRGARGRAMAGAPPEVVKPMLVPPSPYYLIYSPPVDLAKPPDTTTHARKPRS
Ga0209806_11305072	3300026529	Soil	MHVSARVRVAAVLGGALLTLAACSGGRAARGRTPAAAGPPPEAVKQMQVPQSPYYIIYSPPVSLAKQPDTTAQRRKPRS
Ga0209160_11772513	3300026532	Soil	MHGSARVRVAAVLGGALLTLVACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAK
Ga0209157_10055392	3300026537	Soil	MHGSARVRVAAVLGSALLTLAACSGGGAARGRTPAAAGPPPEVLKPLEVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR
Ga0209161_100394821	3300026548	Soil	RVKDPNTGRSQGETMHVAQIRVAILSSILVTIVACGGAARRQAAPAGPPPEVVKALQVPESPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0209161_100527592	3300026548	Soil	MHVSARVRVAAVLGGALLTLVACGGGSAARGRTPAAAGPPPEVVKQMQVPQSPYYIIYSPPVNLAKQPDTTAQRRKPRS
Ga0209161_105496771	3300026548	Soil	RSAMYLRIPLRLAVVLSATFLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVSLAKPPDTTAHVRKPRS
Ga0209689_10630402	3300027748	Soil	MHGSARVRVAAVLGGALLTLVACGGGGAARGRTSAAAGPPPEVLKPLQVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR
Ga0209689_10701262	3300027748	Soil	MHISRHVRVAAVLGGALLTLAACSGGSAARGRTPAAAGPTPEAVKQMQVPQSPYYIIYSPPVNLAKEPDTTAQRRKPRS
Ga0209689_12008532	3300027748	Soil	MYLRIPLRLAVVLSATFLVLAACRGGAARGRAARAAVPPPEVVKPLLVPDSPYYIIYSPPVNLAKPPDTTAHVRKPRG
Ga0209073_101407812	3300027765	Agricultural Soil	MHVSQIRVTILTGILVTIVACGGAARRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0209177_104999571	3300027775	Agricultural Soil	QIRVAILTGILMTIVACGGAARRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0209590_100273513	3300027882	Vadose Zone Soil	MHVSARVRVAAVLGGALLTLAACGGGSAARGRTPAAAGPPPEVLKPLEVPPSPYYIIYSPPVNLAKQPDTTAHARKPRR
Ga0209590_102127343	3300027882	Vadose Zone Soil	MYLRIPLRLAVVLSATFLVLAACRGGAARGRAARAAVPPPEVVKPLLVPESPYYIIYSPPVNLAK
Ga0307469_101597222	3300031720	Hardwood Forest Soil	MHVPQIRVAILMGILITIAACGGAARRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0307469_101844992	3300031720	Hardwood Forest Soil	MHVSQIRVAILTGILVTIVACGGAPRRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPKS
Ga0307470_101595241	3300032174	Hardwood Forest Soil	IRVAILMGILITIAACGGAARRQAAPAGPPPEVLKALEVPPSPYYLIYSPPVSLAKPPDTTAHARKPRS
Ga0307471_1000310085	3300032180	Hardwood Forest Soil	MHVSQIRVAILTGILVTIVACGGAPRRQAAPAGPPPEVLKALEVPASPYYLIYSPPVSLAKPPDTTAHARKPKS
Ga0307471_1018095012	3300032180	Hardwood Forest Soil	MHVSARVGVAAVLGGALLTLAACSGGGTARGRTPAAAGPPPEVVKQMQVPPSPYYIIYYPPVNLAKQPDTTAHARKPRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071684

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences