Metagenome / Metatranscriptome Family F071686

Basic Information
Family ID	F071686
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	45 residues
Representative Sequence	ITVDYKDGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK
Number of Associated Samples	115
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.82 %
% of genes near scaffold ends (potentially truncated)	99.18 %
% of genes from short scaffolds (< 2000 bps)	94.26 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Unclassified (59.016 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.574 % of family members)
Environment Ontology (ENVO)	Unclassified (27.049 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.705 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.57% β-sheet: 11.43% Coil/Unstructured: 70.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02653	BPD_transp_2	57.38
PF00005	ABC_tran	1.64
PF02504	FA_synthesis	0.82
PF05192	MutS_III	0.82
PF01425	Amidase	0.82
PF00732	GMC_oxred_N	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.82
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.82
COG0416	Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis)	Lipid transport and metabolism [I]	0.82
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
All Organisms	root	All Organisms	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
cellular organisms	root	All Organisms → cellular organisms	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	24.59 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	24.59 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	16.39 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	7.38 %
Nitriliruptoraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	13.93 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	7.38 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.46 %
Nitriliruptor	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.02 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	13.93 %
Patulibacter medicamentivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	7.38 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.46 %
Nitriliruptor alkaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002J4MZE	Not Available	521	Open in IMG/M
2170459007\|GJ61VE201B8QBQ	Not Available	502	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101904954	Not Available	585	Open in IMG/M
3300000559\|F14TC_105254874	Not Available	562	Open in IMG/M
3300000956\|JGI10216J12902_104604006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1557	Open in IMG/M
3300003993\|Ga0055468_10069893	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300004081\|Ga0063454_102075519	Not Available	504	Open in IMG/M
3300004156\|Ga0062589_100050775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2319	Open in IMG/M
3300004463\|Ga0063356_101458282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1011	Open in IMG/M
3300005169\|Ga0066810_10001521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2460	Open in IMG/M
3300005187\|Ga0066675_10786499	Not Available	718	Open in IMG/M
3300005338\|Ga0068868_101996274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	551	Open in IMG/M
3300005436\|Ga0070713_101369525	Not Available	686	Open in IMG/M
3300005438\|Ga0070701_10515295	Not Available	779	Open in IMG/M
3300005440\|Ga0070705_100326568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	1110	Open in IMG/M
3300005441\|Ga0070700_100663981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	825	Open in IMG/M
3300005441\|Ga0070700_101288621	Not Available	614	Open in IMG/M
3300005466\|Ga0070685_10872442	Not Available	668	Open in IMG/M
3300005526\|Ga0073909_10557997	Not Available	561	Open in IMG/M
3300005538\|Ga0070731_10919489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	580	Open in IMG/M
3300005718\|Ga0068866_10751127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	674	Open in IMG/M
3300005718\|Ga0068866_10817745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	649	Open in IMG/M
3300005719\|Ga0068861_101115991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	759	Open in IMG/M
3300005840\|Ga0068870_11434784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	506	Open in IMG/M
3300005886\|Ga0075286_1067683	Not Available	520	Open in IMG/M
3300006041\|Ga0075023_100145797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	867	Open in IMG/M
3300006051\|Ga0075364_10874063	Not Available	612	Open in IMG/M
3300006163\|Ga0070715_10522331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	683	Open in IMG/M
3300006573\|Ga0074055_11326774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1268	Open in IMG/M
3300006846\|Ga0075430_101453324	Not Available	563	Open in IMG/M
3300006953\|Ga0074063_13968640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1173	Open in IMG/M
3300007076\|Ga0075435_100181527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1779	Open in IMG/M
3300009101\|Ga0105247_10042205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	2793	Open in IMG/M
3300010362\|Ga0126377_11875459	Not Available	675	Open in IMG/M
3300010362\|Ga0126377_12615761	Not Available	580	Open in IMG/M
3300010376\|Ga0126381_105136475	Not Available	501	Open in IMG/M
3300010400\|Ga0134122_10195541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1674	Open in IMG/M
3300010403\|Ga0134123_11189853	Not Available	792	Open in IMG/M
3300010403\|Ga0134123_11358279	Not Available	749	Open in IMG/M
3300010865\|Ga0126346_1342179	Not Available	533	Open in IMG/M
3300011969\|Ga0120166_1013449	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300012212\|Ga0150985_111155319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	1248	Open in IMG/M
3300012350\|Ga0137372_10739896	Not Available	709	Open in IMG/M
3300012355\|Ga0137369_11147995	Not Available	504	Open in IMG/M
3300012519\|Ga0157352_1079081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	547	Open in IMG/M
3300012892\|Ga0157294_10310407	Not Available	508	Open in IMG/M
3300012893\|Ga0157284_10042189	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300012907\|Ga0157283_10115058	Not Available	743	Open in IMG/M
3300012912\|Ga0157306_10157598	Not Available	724	Open in IMG/M
3300012916\|Ga0157310_10004734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	3059	Open in IMG/M
3300012951\|Ga0164300_11170385	Not Available	507	Open in IMG/M
3300012957\|Ga0164303_11291332	Not Available	539	Open in IMG/M
3300012964\|Ga0153916_10956312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	937	Open in IMG/M
3300012985\|Ga0164308_10836108	Not Available	806	Open in IMG/M
3300012986\|Ga0164304_11349081	Not Available	583	Open in IMG/M
3300012987\|Ga0164307_10683306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	802	Open in IMG/M
3300014326\|Ga0157380_10174804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1880	Open in IMG/M
3300015373\|Ga0132257_100797453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	1179	Open in IMG/M
3300015374\|Ga0132255_100805240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1401	Open in IMG/M
3300015374\|Ga0132255_104560093	Not Available	587	Open in IMG/M
3300017939\|Ga0187775_10123409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300018058\|Ga0187766_10194778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	1278	Open in IMG/M
3300018089\|Ga0187774_11281333	Not Available	530	Open in IMG/M
3300018429\|Ga0190272_13244314	Not Available	507	Open in IMG/M
3300018466\|Ga0190268_11064883	Not Available	653	Open in IMG/M
3300018469\|Ga0190270_12126311	Not Available	621	Open in IMG/M
3300019232\|Ga0180114_1371946	Not Available	536	Open in IMG/M
3300021081\|Ga0210379_10295280	Not Available	708	Open in IMG/M
3300022737\|Ga0247747_1032182	Not Available	613	Open in IMG/M
3300022903\|Ga0247774_1039687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	1161	Open in IMG/M
3300024055\|Ga0247794_10016481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1789	Open in IMG/M
3300024232\|Ga0247664_1076987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300025464\|Ga0208076_1089944	Not Available	529	Open in IMG/M
3300025619\|Ga0207926_1115281	Not Available	639	Open in IMG/M
3300025891\|Ga0209585_10155435	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300025903\|Ga0207680_10737097	Not Available	706	Open in IMG/M
3300025915\|Ga0207693_10021237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5160	Open in IMG/M
3300025918\|Ga0207662_11245084	Not Available	529	Open in IMG/M
3300025935\|Ga0207709_10973146	Not Available	693	Open in IMG/M
3300025961\|Ga0207712_10367039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	1201	Open in IMG/M
3300025986\|Ga0207658_11865180	Not Available	548	Open in IMG/M
3300026062\|Ga0208654_1026515	Not Available	729	Open in IMG/M
3300026075\|Ga0207708_10947615	Not Available	746	Open in IMG/M
3300026116\|Ga0207674_12008340	Not Available	543	Open in IMG/M
3300026118\|Ga0207675_101509270	Not Available	693	Open in IMG/M
3300026121\|Ga0207683_10026877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	4972	Open in IMG/M
3300026121\|Ga0207683_11709825	Not Available	578	Open in IMG/M
3300026142\|Ga0207698_10265383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1579	Open in IMG/M
3300027869\|Ga0209579_10416333	Not Available	729	Open in IMG/M
3300028379\|Ga0268266_11070314	Not Available	780	Open in IMG/M
3300028381\|Ga0268264_10871788	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300028577\|Ga0265318_10299905	Not Available	586	Open in IMG/M
3300028715\|Ga0307313_10056865	Not Available	1153	Open in IMG/M
3300028771\|Ga0307320_10160543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	872	Open in IMG/M
3300028791\|Ga0307290_10195571	Not Available	741	Open in IMG/M
3300030917\|Ga0075382_11458079	Not Available	515	Open in IMG/M
3300031170\|Ga0307498_10486635	Not Available	502	Open in IMG/M
3300031226\|Ga0307497_10715907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	518	Open in IMG/M
3300031231\|Ga0170824_112281966	Not Available	515	Open in IMG/M
3300031231\|Ga0170824_128649407	Not Available	509	Open in IMG/M
3300031474\|Ga0170818_109231530	Not Available	502	Open in IMG/M
3300031521\|Ga0311364_11674660	Not Available	627	Open in IMG/M
3300031680\|Ga0318574_10385770	Not Available	818	Open in IMG/M
3300031716\|Ga0310813_10448737	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300031854\|Ga0310904_10286794	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300031860\|Ga0318495_10319268	Not Available	690	Open in IMG/M
3300031894\|Ga0318522_10265087	Not Available	651	Open in IMG/M
3300031902\|Ga0302322_100466469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1463	Open in IMG/M
3300031912\|Ga0306921_11527482	Not Available	729	Open in IMG/M
3300031996\|Ga0308176_12301193	Not Available	575	Open in IMG/M
3300032010\|Ga0318569_10524223	Not Available	552	Open in IMG/M
3300032013\|Ga0310906_11119813	Not Available	570	Open in IMG/M
3300032055\|Ga0318575_10118255	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300032075\|Ga0310890_10084572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1940	Open in IMG/M
3300032089\|Ga0318525_10013531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3742	Open in IMG/M
3300032122\|Ga0310895_10229847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300033513\|Ga0316628_103534426	Not Available	564	Open in IMG/M
3300033551\|Ga0247830_11680494	Not Available	509	Open in IMG/M
3300033760\|Ga0314870_017205	Not Available	612	Open in IMG/M
3300033805\|Ga0314864_0155199	Not Available	584	Open in IMG/M
3300034125\|Ga0370484_0074830	Not Available	864	Open in IMG/M
3300034660\|Ga0314781_086468	Not Available	613	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.87%
Host-Associated	Host-Associated	22.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.77%
Plants	Host-Associated → Plants	22.13%
Aquatic	Environmental → Aquatic	4.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.20%
Freshwater	Environmental → Aquatic → Freshwater	2.46%
Peat	Environmental → Terrestrial → Peat	1.64%
Marine	Environmental → Aquatic → Marine	0.82%
Sediment	Environmental → Aquatic → Sediment	0.82%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.10%
Loam	Environmental → Terrestrial → Soil → Loam	9.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.64%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.82%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.10%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.46%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.64%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.64%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.82%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.82%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.82%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.82%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.82%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.82%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011969	Permafrost microbial communities from Nunavut, Canada - A23_80cm_12M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026062	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033760	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_C	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_08198720	2170459003	Grass Soil	TVDYKAGAVVLKEKCFDIAPVDPAIAQTRNWEKKYNLNTGK
L02_05366670	2170459007	Grass Soil	NTDITVDYKAGAVVLKEKCFDIAPVDPAIAQTRNWEKKYNLNTGK
INPhiseqgaiiFebDRAFT_1019049541	3300000364	Soil	PNNTDITVDYKDGKVVVKEKCFNIAPVDKELAQTRIWEKKFNLNTK*
F14TC_1052548742	3300000559	Soil	DITVDYKDGKVVVXXXXXXXXPVDKELAQTRVWEKKYKLNTG*
JGI10216J12902_1046040063	3300000956	Soil	TVDYKDGKVVLKEKCFAIAAVDDELVKTRAWEKKFKLNTAK*
Ga0055468_100698932	3300003993	Natural And Restored Wetlands	NWDITVDYKDGKVVLKEKCFAIAAVDKELVQTRVWEKKFKLNTAK*
Ga0063454_1020755192	3300004081	Soil	WDITVTYKAGKVVQEDKCFGIQAVDKELTQTRAWEKQFKLNTGK*
Ga0062589_1000507751	3300004156	Soil	VDYKDGKVVLKEKCFDIAPVDKELAQTRVWEKKFNLNTK*
Ga0063356_1014582822	3300004463	Arabidopsis Thaliana Rhizosphere	WYFGKGLKAHIPNNWDITVSYSGGKVVQVEKCFAIAAVDKDLVATRAAEKKFKLNTAK*
Ga0066810_100015214	3300005169	Soil	TVTYNNGKIIVKDKCFAIAPVDNSIAQTRKWEKKYNLNTK*
Ga0066675_107864991	3300005187	Soil	DITVDYKGGQVVVKEKCFDIAAVDKSIAQTRIWEKKFKLNTG*
Ga0068868_1019962741	3300005338	Miscanthus Rhizosphere	LAYHIPNNWDITVTYKGGQVVQEDKCFAIQAVDKELTQTRAWEKQFKLNTAK*
Ga0070713_1013695251	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	NNTDITVDYKGGNVVVRTGCTAIAAVDKQLTQTRAWEKKYHLNTGK*
Ga0070701_105152952	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	PNNTDITVTYKAGEVVTEDKCIPIQAVDPELTQTRKWETQFNLNTGK*
Ga0070705_1003265682	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DITVDYKGGKVVLKEKCFDIAPVDKELAQTRIWEKKFNLNTK*
Ga0070700_1006639812	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	HIPNNWDITVDYKDGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK*
Ga0070700_1012886212	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TVDYKDGKVVLKEKCFGIAPVDRELAQTRIWEKKFNLNTK*
Ga0070685_108724422	3300005466	Switchgrass Rhizosphere	DITVDYKDGKVVKKESCFDIAAVDKELAQTRVWEKKLKLNTG*
Ga0073909_105579971	3300005526	Surface Soil	PNNTDRTVDYKDKKVVLKEKCFDIAAVDKELAQTRVWEKKFNLNTK*
Ga0070731_109194891	3300005538	Surface Soil	LPYHIPNNSDITVDYKNGQVVLKKGCTQIAAVDPEITQTRLWEKKYHLQG*
Ga0068866_107511272	3300005718	Miscanthus Rhizosphere	PYHIPNNWDITVDYKGGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK*
Ga0068866_108177452	3300005718	Miscanthus Rhizosphere	YHIPNNWDITVTYKGGQVVQEDKCFAIQAVDKELTQTRAWEKQFKLNTAK*
Ga0068861_1011159912	3300005719	Switchgrass Rhizosphere	HIPNNWDITVDYKKGKVVVKEKCFAIAAVDKSISQTRAWEKKFKLNGG*
Ga0068870_114347841	3300005840	Miscanthus Rhizosphere	YHIPNNTDITVDYKDGKVVKKESCFDIAAVDKELAQTRVWEKKLKLNTG*
Ga0075286_10676831	3300005886	Rice Paddy Soil	DGKVVKKESCFDIAAVDKELAQTRVWEKKLKLNTG*
Ga0075023_1001457971	3300006041	Watersheds	HIPNNTDITVTYKAGAVVTEDKCFAIQAVDPELTQTRAWEKQFNLNTGK*
Ga0075364_108740631	3300006051	Populus Endosphere	YKDGKVVLKEKCFAIAAVDAELVKTRAWEKKFKLNTAK*
Ga0070715_105223311	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LPYHIPNNTDITVTYKAGKIVTEDKCFDIAPIDKQLTQTRKWEKQFNLNTGK*
Ga0074055_113267741	3300006573	Soil	VDYKDGKVVLKEKCFAIAPVDKEMAQTRVWEKKFNLNTGK*
Ga0075430_1014533241	3300006846	Populus Rhizosphere	IPNNTDITVVYDNGKLKQVDACFPIQAVDPQLKQTRVWEKKYKLNTAK*
Ga0074063_139686402	3300006953	Soil	YHIPNNWDITVDYKDGKVVLKEKCFAIAPVDKEMAQTRVWEKKFNLNTGK*
Ga0075435_1001815271	3300007076	Populus Rhizosphere	DITVDYKNGKVVVKEKCFDIAPVDKELAQTRIWEKKFNLNTK*
Ga0105247_100422051	3300009101	Switchgrass Rhizosphere	NTDITVTYKAGEVVTEDKCIPIQAVDPELTQTRKWETQFNLNTGK*
Ga0126377_118754591	3300010362	Tropical Forest Soil	NTDITVDYKNGKVVLKEKCFEIAPVDKEVAQTRVWEKKFKLNTAG*
Ga0126377_126157611	3300010362	Tropical Forest Soil	HIPNNWDITVDYKGGNVVIKEKCFPIAPVDKAITQTRAFEKKFKLN*
Ga0126381_1051364751	3300010376	Tropical Forest Soil	NALPYHIPNNTDITVDYKAGKVVVRTGCTEIYPVDKQLTQTRQWEKKYHLN*
Ga0134122_101955411	3300010400	Terrestrial Soil	KKGKVVVKEKCFAIAAVDKSISQTRAWEKKIKLNGG*
Ga0134123_111898531	3300010403	Terrestrial Soil	VGNNLPYHIPNNWDITVDYKGGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK*
Ga0134123_113582791	3300010403	Terrestrial Soil	PNNWDITVDYKDGKVVLKEKCFAIAPVDKEMAQTRVWEKKFNLNTGK*
Ga0126346_13421792	3300010865	Boreal Forest Soil	VGNALPYHIPNNSDITVDYKNGQVVPKTGCTKIAAVDPEITQTRLWEQKYHLQG*
Ga0120166_10134492	3300011969	Permafrost	PWYVGNLAYHIPSNWDITVDYKAGKVVLKEKCFAIAPVDASVAQTRAWEKKFKLNG*
Ga0150985_1111553192	3300012212	Avena Fatua Rhizosphere	PLKYHIPNNWDITVTYRNGKVVLADKCFAIAPVDSEIVQTRKWERQFKLNTRK*
Ga0137372_107398961	3300012350	Vadose Zone Soil	IPNNTDITVSYADGKVVQTEKCFAIQAVDKDLVTTRAAEKKFKLNAG*
Ga0137369_111479952	3300012355	Vadose Zone Soil	GKVVVKEKCFAIAAVDKSIAQTRIWEKKFKLTSG*
Ga0157352_10790812	3300012519	Unplanted Soil	DYKDGKVVLKEKCFAIAPVDKEMAQTRVWEKKFNLNTGK*
Ga0157294_103104071	3300012892	Soil	DVVVKNGCTAIAAVDKSVAQTRIWEKKFNLNTGK*
Ga0157284_100421892	3300012893	Soil	VGNALPYHIPNNWDITVDYKGGKVVLKEKCFAIAPVDKEVAQTRVWEKKFKLNTGK*
Ga0157283_101150581	3300012907	Soil	KVGKVVLKEKCFAIAPVDKEVAQTRVWEKKFKLNTGK*
Ga0157306_101575982	3300012912	Soil	CKPWYVGNALPYHIPSNWDITVDYKDGKVVLKEKCFAIAAVDAELAQTRVWEKKFNLNTGK*
Ga0157310_100047345	3300012916	Soil	DITVDYKGGKVVLKEKCFAIAPVDKEVAQTRVWEKKFKLNTGK*
Ga0164300_111703852	3300012951	Soil	GGKVVLKEKCFAIAPVDKEVAQTRVWEKKFNLNTGK*
Ga0164303_112913321	3300012957	Soil	NNGKVVLKEKCFDIAPVDKELAQTRIWEKKFNLNTK*
Ga0153916_109563122	3300012964	Freshwater Wetlands	PNNTDITVDYKGGNVVSKEKCFDIAPVDQALTQTRAWEKKFKLNTGK*
Ga0164308_108361081	3300012985	Soil	IPNNVDITADYKGGKVVVKEPCFAIAPVDKALAQTRVFEKKLKLNTG*
Ga0164304_113490811	3300012986	Soil	NTDITVDYKDGKVVVKEKCFDIAPVDKELAQTRVWEKKYKLNTG*
Ga0164307_106833061	3300012987	Soil	KNGKVVLKEKCFEIAPVDKELAQTRAWEKKFNLNTK*
Ga0157380_101748041	3300014326	Switchgrass Rhizosphere	NNWDITVDYKDGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK*
Ga0132257_1007974532	3300015373	Arabidopsis Rhizosphere	DYKDGKVVKKESCFDIAAVDKELAQTRVWEKKLKLNTG*
Ga0132255_1008052403	3300015374	Arabidopsis Rhizosphere	YKDGKVVVKEKCFDIAPVDKEVAQTRVWEKKFKLNTG*
Ga0132255_1045600931	3300015374	Arabidopsis Rhizosphere	NNADITVDYKDGKVVVKEKCFNIGPVDKEIAQTRVWEKKYKLNTG*
Ga0187775_101234091	3300017939	Tropical Peatland	YHIPNNTDITVDYKNGAVVVKQPCFEITGATDQPIRQTRVWEKKYHLNG
Ga0187766_101947781	3300018058	Tropical Peatland	NNTDITVDYKNGAVVVKQPCFEITGATDAPIRQTRVWEKKYHLNG
Ga0187774_112813332	3300018089	Tropical Peatland	YVGNLAYHIPNNTDITVDYKNGAVVVKQPCFEITGATDAPIRQTRVWEKKYHLNG
Ga0190272_132443142	3300018429	Soil	TYKGGKVVQEDKCFAIQAVDKELTQTRAWEKQFKLNTAK
Ga0190268_110648831	3300018466	Soil	VDYKKGNVVVKEKCFAIQAVDKSIAQTRVWEKKFNLNGG
Ga0190270_121263112	3300018469	Soil	DITVTYRNGKVVEVDKCFDIAPVDKELGQTRKWEKKFKLNTAK
Ga0180114_13719462	3300019232	Groundwater Sediment	WDITVDYKDGKVVLKEKCFAIAAVDAEMAKTRVWEKKFKLQG
Ga0210379_102952802	3300021081	Groundwater Sediment	IPNNTDITVDYKNGKVVKKESCFDIAAVDKELAQTRVWEKKLKLNTG
Ga0247747_10321821	3300022737	Soil	PYHIPNNWDITVDYKGGKVVLKEKCFAIAPVDKEVAQTRVWEKKFKLNTGK
Ga0247774_10396871	3300022903	Plant Litter	VDYKNKDVVVKNGCTAIAAVDKSVAQTRVWEKKFNLNTGK
Ga0247794_100164813	3300024055	Soil	TYKNGKVVQSDKCFKVAPVDKEIAQTRVWEKKFKLN
Ga0247664_10769872	3300024232	Soil	KDGKVVVKEKCFDIAPVDKELAQTRVWEKKYKLNTG
Ga0208076_10899442	3300025464	Arctic Peat Soil	TVDYKGGQVVQKQGCFAIAAVDPQITQTRIWEKKYHLQG
Ga0207926_11152812	3300025619	Arctic Peat Soil	WYVGNLAYHIPNNNDITVDYKGGNVVTRTGCVPIAPVDAAVTQTRAWEKKFNLNTGK
Ga0209585_101554351	3300025891	Arctic Peat Soil	DITVDYKAGKVVPKEKCFAIAPVDASVAQTRVWEKKFKLNG
Ga0207680_107370972	3300025903	Switchgrass Rhizosphere	LPYHIPNNTDITVTYKAGEVVTEDKCIPIQAVDPELTQTRKWETQFNLNTGK
Ga0207693_100212371	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	NGKVVVADKCFAIAPVDSEIAQTRKWERQFKLNTGK
Ga0207662_112450841	3300025918	Switchgrass Rhizosphere	NWDITVDYKDGKVVLKEKCFAIAPVDKEMAQTRVWEKKFNLNTGK
Ga0207709_109731462	3300025935	Miscanthus Rhizosphere	TVDYKDGKVVLKEKCFAIAPVDKELAQTRIWEKKFNLNTK
Ga0207712_103670392	3300025961	Switchgrass Rhizosphere	VTYKNGKVVQSDKCFKVAPVDKEIAQTRIWEKKYKLN
Ga0207658_118651802	3300025986	Switchgrass Rhizosphere	KAGEVVTEDKCIPIQAVDPELTQTRKWETQFNLNTGK
Ga0208654_10265151	3300026062	Natural And Restored Wetlands	IGATYRNGAVVRSDACFNIQAVDREIAQTRVWEKKFKLNTAK
Ga0207708_109476152	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GKVVLKEKCFEIAAVDKELAQTRVWEKKFKLNTGG
Ga0207674_120083401	3300026116	Corn Rhizosphere	ITVDYKDGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK
Ga0207675_1015092702	3300026118	Switchgrass Rhizosphere	NNWDITVTYKGGKVVQEDKCFAIQAVDPELTQTRAWEKKFNLNTGK
Ga0207683_100268771	3300026121	Miscanthus Rhizosphere	GGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK
Ga0207683_117098252	3300026121	Miscanthus Rhizosphere	ITVDYKDGKVVLKEKCFAIAPVDKELAQTRIWEKKFNLNTK
Ga0207698_102653831	3300026142	Corn Rhizosphere	QGCKVVLKEKCFAIAPVDKEMAQTRVWEKKFNLNTGK
Ga0209579_104163332	3300027869	Surface Soil	YVGNALPYHIPNNSDITVDYKNGQVVLKKGCTQIAAVDPEITQTRLWEKKYHLQG
Ga0268266_110703142	3300028379	Switchgrass Rhizosphere	HIPNNTDITVDYKDGKVVKKESCFDIAAVDKELAQTRVWEKKLKLNTG
Ga0268264_108717882	3300028381	Switchgrass Rhizosphere	KGGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK
Ga0265318_102999051	3300028577	Rhizosphere	HIPNNVDITVDYKNGQVVPKQGCFQIAAVDPQIAQTRVWEKKYHLQG
Ga0307313_100568652	3300028715	Soil	AGKVVTEDKCFAIQAVDPQLTQTRAWEKQFKLNTGK
Ga0307320_101605431	3300028771	Soil	VDYKGGNVVVKEKCFAIAAVDKSIAQTRVWEKKFKLNGG
Ga0307290_101955712	3300028791	Soil	YHIPSNWDITVTYKAGKVVTEDKCFAIQAVDPQLTQTRAWEKQFKLNSGK
Ga0075382_114580792	3300030917	Soil	NALPYHIPNNWDITVDYKNGQVVQKENCFAIAPVDPQLAQTRVWEKKYHLQG
Ga0307498_104866352	3300031170	Soil	DYKDGKVVLKEKCFDIAPVDKELAQTRIWEKKFNLNTK
Ga0307497_107159072	3300031226	Soil	NTDITVDYKNGKVVLKEKCFDIAAVDPELATTRVWEKKFNLNTK
Ga0170824_1122819662	3300031231	Forest Soil	GNLAYHIPNNVDITVDYKAGNVVVRTGCTAIAPVDKAITQTRVWEKKYGLNDG
Ga0170824_1286494071	3300031231	Forest Soil	DITVDYKGGNVVLKEKCFDIAPVDPEVAQTRVWEKKYHLNG
Ga0170818_1092315302	3300031474	Forest Soil	WDITVDYKNGAVVQKQNCFAIAAVDPQIAQTRLWEKKYHLQG
Ga0311364_116746602	3300031521	Fen	PNNTDITVTYKGGQVVANEKCFNIAPVDPEIAQTRVWEKKFKLNTGK
Ga0318574_103857702	3300031680	Soil	HIPNNTDITVDYKAGTVVVKESCFAIAPVDKAIAQTRVWEKKYKLN
Ga0310813_104487371	3300031716	Soil	DITVDYKDGKVVVKEKCFDIAPVDKEVAQTRVWEKKFKLNTGK
Ga0310904_102867941	3300031854	Soil	GNALPYHIPNNWDITVDYKGGKVVLKEKCFAIAPVDKEVAQTRVWEKKFNLNTGK
Ga0318495_103192682	3300031860	Soil	NALPYHIPNNTDITVDYKSGQVVVKQGCFDIAPVDKQLTQTRVWEKKYHLN
Ga0318522_102650871	3300031894	Soil	TDITVDYKSGQVVVKQGCFDIAPVDKQLTQTRVWEKKYHLN
Ga0302322_1004664691	3300031902	Fen	NTDITVTYKGGQVVANEKCFNIAPVDPEIAQTRVWEKKFKLNTGK
Ga0306921_115274822	3300031912	Soil	VDYKNGKVVVKQKCFSIAPVDTELVKTRVFEKKFKLNTG
Ga0308176_123011931	3300031996	Soil	GNLAYHIPNNWNITVDYKDGNVVVKNKCFAIQAVDKSIAQTRTWEKKFKLQG
Ga0318569_105242232	3300032010	Soil	PYHIPNNTDITVDYKSGQVVVKQGCFDIAPVDKQLTQTRVWEKKYHLN
Ga0310906_111198131	3300032013	Soil	KPWYVGNALPYHIPVNTDITVDYKDGKVVLKEKCFDIAAVDKELAQTRVWEKKFKLNTG
Ga0318575_101182553	3300032055	Soil	YVGNALPYHIPNNTDITVDYKSGQVVVKQGCFDIAPVDKQLTQTRVWEKKYHLN
Ga0310890_100845723	3300032075	Soil	TYRNGAVVRSDACFNIQAVDSEIAQTRVWEKKFKLNTAK
Ga0318525_100135311	3300032089	Soil	DYKSGQVVVKQGCFDIAPVDKQLTQTRVWEKKYHLN
Ga0310895_102298472	3300032122	Soil	KDGKVVLKEKCFAIAAVDAELAQTRVWEKKFNLNTGK
Ga0316628_1035344261	3300033513	Soil	LPYHIPNNVNIIVDYRKGNVVQKQPCTAIAAVDKAVAQTRVWEKKYHLQG
Ga0247830_116804941	3300033551	Soil	PYHIPNNWDITVDYKGGKVVLKEKCFAIAPVDKELAQTRVWEKKFNLNTGK
Ga0314870_017205_491_610	3300033760	Peatland	VTYDKGKVVVKDKCFAIAPVDGSIAQTRKWEKKYHLNTH
Ga0314864_0155199_473_583	3300033805	Peatland	YKAGQVVVKQGCFDIYPVDKQLTQTRIWEKKYHLNG
Ga0370484_0074830_2_166	3300034125	Untreated Peat Soil	GNALPYHIPNNTDITVDYKNGQVVQKEPCFDIQAVDPQVAQTRVWEKKYHLNGS
Ga0314781_086468_434_613	3300034660	Soil	PWYVGNALPYHIPSNWDITVDYKDGKVVLKEKCFAIAAVDAELAQTRVWEKKFNLNTGK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071686

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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