Metagenome / Metatranscriptome Family F071690

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071690
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	88 residues
Representative Sequence	WVRTNALNLAIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKSE
Number of Associated Samples	88
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	14.88 %
% of genes near scaffold ends (potentially truncated)	76.23 %
% of genes from short scaffolds (< 2000 bps)	82.79 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.508 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.148 % of family members)
Environment Ontology (ENVO)	Unclassified (38.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.213 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.25% β-sheet: 0.00% Coil/Unstructured: 47.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01042	Ribonuc_L-PSP	54.10
PF00753	Lactamase_B	2.46
PF05015	HigB-like_toxin	1.64
PF07238	PilZ	1.64
PF00326	Peptidase_S9	1.64
PF08448	PAS_4	0.82
PF00873	ACR_tran	0.82
PF13749	HATPase_c_4	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	54.10
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	1.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
All Organisms	root	All Organisms	20.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
cellular organisms	root	All Organisms → cellular organisms	20.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.20 %
Candidatus Eremiobacterota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.20 %
Candidatus Eremiobacteriia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.38 %
Candidatus Eremiobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales	0.82 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Candidatus Eremiobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae	0.82 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.82 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Candidatus Eremiobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae → Candidatus Eremiobacter	0.82 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.82 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
unclassified Candidatus Eremiobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae → Candidatus Eremiobacter → unclassified Candidatus Eremiobacter	0.82 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.82 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.51 %
Candidatus Eremiobacter sp. RRmetagenome_bin22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae → Candidatus Eremiobacter → unclassified Candidatus Eremiobacter → Candidatus Eremiobacter sp. RRmetagenome_bin22	0.82 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.82 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10104905	Not Available	718	Open in IMG/M
3300002245\|JGIcombinedJ26739_100990706	Not Available	725	Open in IMG/M
3300003367\|JGI26338J50219_1013624	Not Available	685	Open in IMG/M
3300003370\|JGI26337J50220_1003196	Not Available	1908	Open in IMG/M
3300003505\|JGIcombinedJ51221_10014528	Not Available	2648	Open in IMG/M
3300004091\|Ga0062387_100291599	Not Available	1045	Open in IMG/M
3300004092\|Ga0062389_100128963	Not Available	2326	Open in IMG/M
3300004092\|Ga0062389_100549688	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300004092\|Ga0062389_100580248	Not Available	1282	Open in IMG/M
3300004092\|Ga0062389_102793193	Not Available	652	Open in IMG/M
3300004092\|Ga0062389_102847594	Not Available	646	Open in IMG/M
3300004092\|Ga0062389_102862384	Not Available	645	Open in IMG/M
3300004092\|Ga0062389_102862387	Not Available	645	Open in IMG/M
3300004635\|Ga0062388_100286674	Not Available	1365	Open in IMG/M
3300005541\|Ga0070733_10862963	Not Available	608	Open in IMG/M
3300005591\|Ga0070761_10000830	All Organisms → cellular organisms → Bacteria	19567	Open in IMG/M
3300005602\|Ga0070762_10053211	Not Available	2237	Open in IMG/M
3300005602\|Ga0070762_10230402	Not Available	1144	Open in IMG/M
3300005610\|Ga0070763_10122911	Not Available	1332	Open in IMG/M
3300005610\|Ga0070763_10744332	Not Available	576	Open in IMG/M
3300005712\|Ga0070764_10121631	Not Available	1413	Open in IMG/M
3300005944\|Ga0066788_10216752	Not Available	500	Open in IMG/M
3300006163\|Ga0070715_10441499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300006176\|Ga0070765_100020812	Not Available	4901	Open in IMG/M
3300009523\|Ga0116221_1558260	Not Available	503	Open in IMG/M
3300010396\|Ga0134126_11113135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → Candidatus Eremiobacteriia → Candidatus Eremiobacterales → Candidatus Eremiobacteraceae → Candidatus Eremiobacter → unclassified Candidatus Eremiobacter → Candidatus Eremiobacter sp. RRmetagenome_bin22	880	Open in IMG/M
3300014159\|Ga0181530_10574292	Not Available	554	Open in IMG/M
3300014201\|Ga0181537_10182427	Not Available	1442	Open in IMG/M
3300014501\|Ga0182024_11481127	Not Available	776	Open in IMG/M
3300014657\|Ga0181522_10486538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	743	Open in IMG/M
3300017822\|Ga0187802_10048070	Not Available	1555	Open in IMG/M
3300017925\|Ga0187856_1156483	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300017932\|Ga0187814_10035774	All Organisms → cellular organisms → Bacteria → Acidobacteria	1842	Open in IMG/M
3300017942\|Ga0187808_10481744	Not Available	573	Open in IMG/M
3300017943\|Ga0187819_10671393	Not Available	585	Open in IMG/M
3300017975\|Ga0187782_10035927	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	3606	Open in IMG/M
3300017994\|Ga0187822_10061700	Not Available	1076	Open in IMG/M
3300017996\|Ga0187891_1057143	All Organisms → cellular organisms → Bacteria → Acidobacteria	1607	Open in IMG/M
3300018007\|Ga0187805_10429322	Not Available	615	Open in IMG/M
3300018012\|Ga0187810_10234820	Not Available	750	Open in IMG/M
3300018012\|Ga0187810_10246931	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300018037\|Ga0187883_10526434	Not Available	610	Open in IMG/M
3300020581\|Ga0210399_10023849	Not Available	4858	Open in IMG/M
3300020582\|Ga0210395_10256914	Not Available	1313	Open in IMG/M
3300020582\|Ga0210395_11384464	Not Available	513	Open in IMG/M
3300020583\|Ga0210401_10020052	Not Available	6429	Open in IMG/M
3300020583\|Ga0210401_10030814	Not Available	5109	Open in IMG/M
3300020583\|Ga0210401_10655926	Not Available	910	Open in IMG/M
3300021168\|Ga0210406_10589020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	869	Open in IMG/M
3300021171\|Ga0210405_10314778	Not Available	1236	Open in IMG/M
3300021180\|Ga0210396_10336418	Not Available	1333	Open in IMG/M
3300021180\|Ga0210396_11589503	Not Available	534	Open in IMG/M
3300021181\|Ga0210388_10113343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2331	Open in IMG/M
3300021181\|Ga0210388_10890768	Not Available	767	Open in IMG/M
3300021401\|Ga0210393_10065385	Not Available	2866	Open in IMG/M
3300021401\|Ga0210393_10266847	Not Available	1389	Open in IMG/M
3300021401\|Ga0210393_10511540	Not Available	981	Open in IMG/M
3300021401\|Ga0210393_10748923	Not Available	796	Open in IMG/M
3300021401\|Ga0210393_11383008	Not Available	563	Open in IMG/M
3300021402\|Ga0210385_11132773	Not Available	601	Open in IMG/M
3300021402\|Ga0210385_11488515	Not Available	517	Open in IMG/M
3300021405\|Ga0210387_10109211	Not Available	2323	Open in IMG/M
3300021405\|Ga0210387_10124517	Not Available	2181	Open in IMG/M
3300021406\|Ga0210386_11005035	Not Available	711	Open in IMG/M
3300021406\|Ga0210386_11350421	Not Available	599	Open in IMG/M
3300021407\|Ga0210383_10713960	Not Available	861	Open in IMG/M
3300021420\|Ga0210394_10768870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	842	Open in IMG/M
3300021432\|Ga0210384_11112504	Not Available	693	Open in IMG/M
3300021433\|Ga0210391_10295281	Not Available	1272	Open in IMG/M
3300021433\|Ga0210391_10958776	Not Available	666	Open in IMG/M
3300021474\|Ga0210390_10588546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	933	Open in IMG/M
3300021474\|Ga0210390_11203848	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	611	Open in IMG/M
3300021475\|Ga0210392_10531531	Not Available	868	Open in IMG/M
3300021475\|Ga0210392_10773973	Not Available	716	Open in IMG/M
3300021477\|Ga0210398_10016786	Not Available	6328	Open in IMG/M
3300021478\|Ga0210402_10035953	Not Available	4299	Open in IMG/M
3300021479\|Ga0210410_10712627	Not Available	886	Open in IMG/M
3300021559\|Ga0210409_10310439	Not Available	1420	Open in IMG/M
3300021559\|Ga0210409_10847682	Not Available	787	Open in IMG/M
3300024227\|Ga0228598_1068305	Not Available	710	Open in IMG/M
3300025432\|Ga0208821_1058054	Not Available	680	Open in IMG/M
3300025929\|Ga0207664_10791322	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300026467\|Ga0257154_1008824	Not Available	1361	Open in IMG/M
3300027737\|Ga0209038_10095279	Not Available	898	Open in IMG/M
3300027812\|Ga0209656_10259645	Not Available	818	Open in IMG/M
3300027855\|Ga0209693_10016802	Not Available	3486	Open in IMG/M
3300027855\|Ga0209693_10159384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	1114	Open in IMG/M
3300027869\|Ga0209579_10427071	Not Available	719	Open in IMG/M
3300027879\|Ga0209169_10033988	Not Available	2696	Open in IMG/M
3300027879\|Ga0209169_10095540	Not Available	1538	Open in IMG/M
3300027879\|Ga0209169_10099642	Not Available	1504	Open in IMG/M
3300027884\|Ga0209275_10044199	Not Available	2114	Open in IMG/M
3300027884\|Ga0209275_10397630	Not Available	777	Open in IMG/M
3300028795\|Ga0302227_10242411	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300028798\|Ga0302222_10219133	Not Available	743	Open in IMG/M
3300028806\|Ga0302221_10219615	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300028906\|Ga0308309_10005457	Not Available	7677	Open in IMG/M
3300029943\|Ga0311340_11382916	Not Available	557	Open in IMG/M
3300030007\|Ga0311338_10674901	Not Available	1049	Open in IMG/M
3300030053\|Ga0302177_10457022	Not Available	663	Open in IMG/M
3300030057\|Ga0302176_10271207	Not Available	680	Open in IMG/M
3300030503\|Ga0311370_10565546	Not Available	1373	Open in IMG/M
3300030763\|Ga0265763_1051709	Not Available	519	Open in IMG/M
3300031236\|Ga0302324_101622709	Not Available	832	Open in IMG/M
3300031708\|Ga0310686_106985865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1193	Open in IMG/M
3300031718\|Ga0307474_10145470	Not Available	1787	Open in IMG/M
3300031720\|Ga0307469_10147935	Not Available	1753	Open in IMG/M
3300031753\|Ga0307477_10597593	Not Available	744	Open in IMG/M
3300031754\|Ga0307475_10165083	Not Available	1763	Open in IMG/M
3300031754\|Ga0307475_10762131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	769	Open in IMG/M
3300031823\|Ga0307478_10720551	Not Available	835	Open in IMG/M
3300032783\|Ga0335079_11376885	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300032828\|Ga0335080_10743434	All Organisms → cellular organisms → Bacteria → Proteobacteria	1018	Open in IMG/M
3300032954\|Ga0335083_10291897	All Organisms → cellular organisms → Bacteria → Acidobacteria	1437	Open in IMG/M
3300032954\|Ga0335083_10681885	Not Available	837	Open in IMG/M
3300032954\|Ga0335083_11071048	Not Available	631	Open in IMG/M
3300033134\|Ga0335073_11572055	Not Available	629	Open in IMG/M
3300033158\|Ga0335077_10202009	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300033158\|Ga0335077_11519748	Not Available	640	Open in IMG/M
3300034163\|Ga0370515_0166988	Not Available	942	Open in IMG/M
3300034163\|Ga0370515_0269584	Not Available	721	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.23%
Aquatic	Environmental → Aquatic	22.95%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.03%
Freshwater	Environmental → Aquatic → Freshwater	22.95%
Peat	Environmental → Terrestrial → Peat	8.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.95%
Loam	Environmental → Terrestrial → Soil → Loam	16.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.15%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	12.30%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.64%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.64%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300003370	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101049052	3300001471	Forest Soil	TKTRIEWMRTNALALGIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDQRIA*
JGIcombinedJ26739_1009907062	3300002245	Forest Soil	ATSPLSGTKTRLEWLHTNALSLAIRLFVNAAAFSYWIAHPGAATHLFGSAGFPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPAVND*
JGI26338J50219_10136242	3300003367	Bog Forest Soil	WVRTNALNLTIRFFINAAAFSYWLAHPDAATHAIGSVGIPANFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEVPVLKAD*
JGI26337J50220_10031962	3300003370	Bog Forest Soil	VRTNALNLTIRLFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEFGHATAAMFGLSGDSLVDWPAAKIPFLQKEIPVIKAE*
JGIcombinedJ51221_100145283	3300003505	Forest Soil	VRTNALNLTIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQREIPVLKVQ*
Ga0062387_1002915992	3300004091	Bog Forest Soil	RTNAINLTIRLFVNAAAFSYWMAHPDAATRAIGGLGIPLNLTLEPGNATAALFGLSGNSMVDWAAARVPFLQEEIPPENSSGV*
Ga0062389_1001289633	3300004092	Bog Forest Soil	VLKRASLSAQSVLSGTKTRTEWVRTNALNLTIRFFINAAAFSYWLAHPDAATHAIGSVGIPANFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKAE*
Ga0062389_1005496884	3300004092	Bog Forest Soil	ALNLGIRLFVNAAGFSYWIAHPDAATQMIHTLGIPLNLTIEPGHATAAMFGLSGDSMVDWAAAKVPFLQKEIPVSSSDQ*
Ga0062389_1005802482	3300004092	Bog Forest Soil	VRTSALNLTIRFFINAAAFSYWLAHPDAATHAIGSVGIPANFTLEPGHATAAMFGLSGDSLADWAAAKIPFLQKEI
Ga0062389_1027931932	3300004092	Bog Forest Soil	MKRASLSAGSTLSGTKTRIEWMRTNALGLVIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGL
Ga0062389_1028475942	3300004092	Bog Forest Soil	SAKSPLSGIDTRIGWVRAHALNLVIRFFVNAAAFSYWIAHPAMATHAISAMGLPIDLTLEPGHATAAMFGLTGDSMTDWAAAKVPFLQKEIPPPEN*
Ga0062389_1028623842	3300004092	Bog Forest Soil	SLSAGSSLSGTKTRVEWLRTNALTLGIRLFVNAAAFSYWLAHPAAATHAMNSVGVPADFTLEPGHATAAMFGLSGDSLVDWATAKVPFLQKEIPVIDRGTAT*
Ga0062389_1028623872	3300004092	Bog Forest Soil	SLSAGSSLSGTKTRVEWLRTNALTLAIRLFVNAAAFSYWLAHPAAATHAMNSLGVPADFTLEPGHATAAMFGLSGDSLVDWATAKVPFLQKEIPVLDHGSAT*
Ga0062388_1002866742	3300004635	Bog Forest Soil	MKRASLSAGSTLSGTKTRIEWMRTNALGLVIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAK
Ga0070733_108629631	3300005541	Surface Soil	LSGTKTRIEWMRTNALGLVIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDQTTT*
Ga0070761_1000083024	3300005591	Soil	MEWVRANALNLTIRFFINAAGFSCWLAHPDAAAHAIGSVGIPANFTLEPGHASAAMFGISGDSLMDWAAARIPFLQKEIPVLKTD*
Ga0070762_100532112	3300005602	Soil	LSAQSVLSRTKTRTEWVRTNALNLTIRFFINAAAFSYWLAHPDAATHAIGSVGIPANFTLEPGHATAAMFGLSGDSLMDWAAAKIPFLQK*
Ga0070762_102304023	3300005602	Soil	MEWVRANALNLTIRFFINAVAFSCWLAHPDAAAHAIGSVGIPANFTLEPGHASAAMFGISGDSLMDWAAARIPFLQKEIPVLKTD*
Ga0070763_101229111	3300005610	Soil	VRTNALNLTIRFFINAAAFSCWLAHPDAATHAIGSVGIPANFSLEPGHATAAMFGLSGDSLMDWAAAKIPFLQK*
Ga0070763_107443321	3300005610	Soil	MSGTKTRGERLGTNALNLTIRFFVNAAAFSYWLAPPDAATHAIGSVGIPGNFTLEPGQATAAMFGLSGDSLMDSAAAKAS
Ga0070764_101216313	3300005712	Soil	SKLSGTKTRSEWVRTNALNLAIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKSE*
Ga0066788_102167521	3300005944	Soil	EWAQTNALALAIRFFVNAAAFSYWLAHPSAATHAMGGMGFPVDLTLEPGHATAALFGLSGDSMVDWAAAKVPFLQKEVPSVGQ*
Ga0070715_104414993	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	AKSRLSGTKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPMNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND*
Ga0070765_1000208122	3300006176	Soil	VRTNALNLTIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKAE*
Ga0116221_15582601	3300009523	Peatlands Soil	LRTNALNLGIRLFVNAAGFSYWVAHPDAATQMIHTLGIPFNLTIEPGHATAAMFGLSGDSMVDWAAAKVPFLQKEIPASNSQ*
Ga0134126_111131351	3300010396	Terrestrial Soil	GTKTRAEWLRTNALNLAIRLFINAAGFSYWLAHPGAATQAVHTLGIPFNLTIEPSHASAALFGLSGDSMVDWAAAKIPFLQKEIPTVPS*
Ga0181530_105742921	3300014159	Bog	RLNWLRTNALALVIRFFVNAAAFSYWLAHPGAATHVMGGLGLPVNLTLEPGHATAALFGLSGDSMVDWAAAKVPFLQKEIPAVQQ*
Ga0181537_101824272	3300014201	Bog	MKRAGLSVQSSISGTKSRMEWLRTNAMNLVIRFFVNAAAFSYWLAHPDAATHLLNSLGLSANFTLEPGHATAAMFGLSGNSLVDWAAAKVPALQKEIPLADP*
Ga0182024_114811271	3300014501	Permafrost	MKRASLSAQSRLSGTRSRIDWLRTNALSLAIRFFINAAAFSYWLAHPAAATHAIGSVGLPVNLTLEPGHATAALFGLSGDSMVDWAAAKVPFLQKE
Ga0181522_104865382	3300014657	Bog	SSISGTKTRMEWVRTNAMNLAIRFFVNAAAFSHWLAHPDAATHVLGTFGLSANFTLEPGHATAAMFGLSGNSLVDWAAAKVPILQKEIPLTDP*
Ga0187802_100480703	3300017822	Freshwater Sediment	WLKTNAINLTIRLFVNAAAFSYWMAHPDVATRAIGGLGIPLNLTLEPGNATAALFGLSGNSMVDWAAAKVPFLQKEIPPESSGGA
Ga0187856_11564831	3300017925	Peatland	RASLSAQSRISGTKSRLDWLRTNALNLVLRLFVNAAAFSYWLAHPDAATHVIGGVGIPVNLTLEPGTATAAMFGLSADSMVDWAAAKVPFLQKEIPVATDS
Ga0187814_100357743	3300017932	Freshwater Sediment	ASLSTASKISGTESRREWLRTNALNLAIRLFVNAAGFSYWLAHPDAATHVVRTLGIPFDLTIEPGHAAAAMFGLSGDSMVDWAAAKVPFLQKEIPAASDS
Ga0187808_104817441	3300017942	Freshwater Sediment	KSRIDWLKTNAINLAIRFFINAAAFSYWLAHPDAATRAVGALGLPLNMTLEPGNATAALFGLSGNSMVDWAAAKVPFLQKEIPPENSGNA
Ga0187819_106713931	3300017943	Freshwater Sediment	VSSKISGTESRAQWLRTNALNLAIRLFVNAAGFSYWLAHPDAATHVVRTFGIPFDLTIEPGHAAAAMFGLSGDSMVNWAAAKVPFLQKEIPATSDS
Ga0187782_100359276	3300017975	Tropical Peatland	KRAGLSVSSKISGTESRAQWLRTNALNLAIRLFVNAAGFSYLLAHPDAATHVIRALGIPFDLSLEPGHAAAAMFGLSGDSTVDWAAAKVPFLQKEIPASGGS
Ga0187822_100617001	3300017994	Freshwater Sediment	ASRISGTKSRRHWLRVNALTLVIRFFVNAATFAYWLAHPAIGTHVLGAMRIPLNMTLEPGDATAALFGLSGDSMVDWATAKIPFLQKEIPAIPDAGN
Ga0187891_10571431	3300017996	Peatland	SRISGTKSRLDWLRTNALNLVLRLFVNAAAFSYWLAHPDAATHVIGGVGIPVNLTLEPGTATAAMFGLSADSMVDWAAAKVPFLQKEIPVATDS
Ga0187805_104293221	3300018007	Freshwater Sediment	RAGLSVSSKISGTRSRAQWLRTNALNLTIRLFVNAAGFSYWLAHPDAATHVVRTLGIPFDLTIEPGHAAAAMFGLSGDSMVDWAAAKVPFLQKEIPAASDS
Ga0187810_102348201	3300018012	Freshwater Sediment	SLSAKSRLSGTKSRIDWLKTNAINLAIRFFINAAAFSYWMAHPDVATRAISALGLPLNMTLEPGNATAALFGLSGNSMVDWAAAKVPFLQKEIPPETPGGA
Ga0187810_102469311	3300018012	Freshwater Sediment	RAQWLRTNALNLAIRLFVNAAGFSYWLAHPDAATHVVRTLGIPFDLTIEPGHAAAAMFGLSGDSMVDWAAAKVPFLQKEIPAASDS
Ga0187883_105264341	3300018037	Peatland	TNALALVIRFFVNAAAFSYWLAHPTAATHAMGGVGLPVDLTLEPGHATAALFGLSGDSMVDWAAAKVPFLQKEIPAVQQ
Ga0210399_100238496	3300020581	Soil	LSAQSVLSRTKTRTGWVRTNALNLTIRFFINAAAFSCWLAHPDAATHAIGSVGIPANFTLEPGHATAAMFGLSGDSLMDWAAAKIPFLQK
Ga0210395_102569142	3300020582	Soil	LSAQSVLSRTKTRTEWVRTNALNLTIRFFINAAAFSYWLAHPDAATHAIGSVGIPANFSLEPGHATAAMFGLSGDSLMDWAAAKIPFLQK
Ga0210395_113844641	3300020582	Soil	RLSGTKTRREWLCTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210401_100200523	3300020583	Soil	MEWVRANALNLTIRFFINAAGFSCWLAHPDAAAHAIGSVGIPANFTLEPGHASAAMFGISGDSLMDWAAARIPFLQKEIPVLKTD
Ga0210401_100308142	3300020583	Soil	VRTNALNLTIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQREIPVLKVQ
Ga0210401_106559262	3300020583	Soil	SLSAKSHLSGTKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210406_105890201	3300021168	Soil	LSAKSRLSGTKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210405_103147781	3300021171	Soil	TRSEWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGMPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210396_103364182	3300021180	Soil	VRTNALNLTIRFFINAAAFSCWLAHPDAAAHAIGSVGIPANFTLEPGHASAAMFGISGDSLMDWAAARIPFLQKEIPVLKTD
Ga0210396_115895032	3300021180	Soil	GTKTRGEWVRTNALNLTIRFFVNAAAFSYWLAHPNAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKAE
Ga0210388_101133433	3300021181	Soil	LSAQSVLSRTKTRTEWVRTNALNLTIRFFINAAAFSYWLAHPDAATHAIGSVGIPANFSLEPGHATAAMFGLSGDSLMDWAAAKIPFLQKEIPVLKTD
Ga0210388_108907681	3300021181	Soil	WVRTNALNLAIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKSE
Ga0210393_100653853	3300021401	Soil	VRTNALNLTIRFFINAAAFSCWLAHPDAATHAIGSVGIPANFTLEPGHATAAMFGLSGDSLMDWAAAKIPFLQK
Ga0210393_102668471	3300021401	Soil	VRTNALNLTIRFFVNAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQREIP
Ga0210393_105115401	3300021401	Soil	RTNALNLAIRFFVNAAAFSYWIAHPDAATHVIGSIGVPMNLTFEPGHATAAMFGLSGDSLIDWAAAKVPFLQKEIPASD
Ga0210393_107489231	3300021401	Soil	SGTKTRIEWMRTNALALGIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDQRIA
Ga0210393_113830081	3300021401	Soil	LLIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDPGTT
Ga0210385_111327731	3300021402	Soil	REWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKISALQKEIPVVND
Ga0210385_114885152	3300021402	Soil	LIRLFANAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDPGTT
Ga0210387_101092111	3300021405	Soil	SGTKTRLEWLRTNALSLAIRLFVNGAAFSYWMAHPDAATHLIGGIGFPVNLTLEPGHATAAMFGLSGDSMMDWAAAKVPFLQKEIPVVNQ
Ga0210387_101245171	3300021405	Soil	RTNALALGIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDQRIA
Ga0210386_110050351	3300021406	Soil	NLTIRFFINAAAFSCWLAHPDAATHAIGSVGIPANFTLEPGHASAAMFGISGDSLMDWAAAKIPFLQK
Ga0210386_113504211	3300021406	Soil	KTRREWLCTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGMPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210383_107139601	3300021407	Soil	LNLAIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKSE
Ga0210394_107688702	3300021420	Soil	EWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210384_111125041	3300021432	Soil	AKSRLSGTKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGMPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210391_102952811	3300021433	Soil	RTNALNLAIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKSE
Ga0210391_109587762	3300021433	Soil	TRREWVRTNALNLTIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAARIPFLQKEIPVLKAE
Ga0210390_105885462	3300021474	Soil	MEWVRANALNLTIRFFINAAAFSCWLAHPDAAAHAIGSVGIPANFTLEPGHASAAMFGISGDSLMDWAAAKIPFLQKEIPVLKTD
Ga0210390_112038482	3300021474	Soil	VRTNALNLTIRFFINAAAFSYWLAHPDAATHAIGSVGIPANFSLEPGHATAAMFGLSGDSLMDWAAAKIPFLQK
Ga0210392_105315311	3300021475	Soil	TKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210392_107739731	3300021475	Soil	RASLSAKSRLSGTKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210398_100167866	3300021477	Soil	MEWVRANALNLTIRFFINAVAFSCWLAHPDAAAHAIGSVGIPANFTLEPGHASAAMFGISGDSLMDWAAARIPFLQKEIPVLKTD
Ga0210402_100359535	3300021478	Soil	ALNLMIRFFVNAAAFSYWLAHPDAATHAVGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWATAKIPFLQKEIPVLKSD
Ga0210410_107126271	3300021479	Soil	SGTKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKVPALQKEIPVVSD
Ga0210409_103104391	3300021559	Soil	SAKSRLSGTKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGMPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0210409_108476822	3300021559	Soil	TRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0228598_10683052	3300024227	Rhizosphere	EWMRTNALNLVIRFFVNAAAFSYWIAHPDAATHIIGSIGVPMNLTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAVNGGDS
Ga0208821_10580541	3300025432	Peatland	LDWLRTNALNLALRLFVNGAAFSYWMAHPDAATHLIGAVGIPANLTLEPGSATAAMFGLSADSMVDWAAAKVPFLQKEIPVAGD
Ga0207664_107913222	3300025929	Agricultural Soil	MMLRITRTAAAKSRLSGTKTRREWLRTNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNFTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0257154_10088243	3300026467	Soil	VRTNALNLTIRIFVNAAAFSYWLARPDAATHAIGSVGIPGNFTREPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKAE
Ga0209038_100952792	3300027737	Bog Forest Soil	VRTNALNLTIRLFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEFGHATAAMFGLSGDSLVDWPAAKIPFLQKEIPVIKAE
Ga0209656_102596452	3300027812	Bog Forest Soil	LTIRFFVNAAAFSYWLAHPDAATHAIGSVGIAGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKTE
Ga0209693_100168024	3300027855	Soil	LSAQSVLSRTKTRTEWVRTNALNLTIRFFINAAAFSCWLAHPDAATHAIGSVGIPANFSLEPGHATAAMFGLSGDSLMDWAAAKIPFLQK
Ga0209693_101593842	3300027855	Soil	ALGLVIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDQTTT
Ga0209579_104270712	3300027869	Surface Soil	TNALALGIRLFVNAAAFSYWIAHPGAATHLFGSAGLPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0209169_100339882	3300027879	Soil	LSAQSVLPRTKTRTEWVRTNALNLTIRFFINAAAFSCWLAHPDAATHAIGSVGIPANFTLEPGHASAAMFGISGDSLMDWAAARIPFLQKEIPVLKTD
Ga0209169_100955401	3300027879	Soil	IKLASLSAESHLSGTKTRIEWMRTNALGLVIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDPGTT
Ga0209169_100996423	3300027879	Soil	AESKLSGTKTRSEWVRTNALNLAIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKSE
Ga0209275_100441992	3300027884	Soil	LSAQSVLSRTKTRTEWVRTNALNLTIRFFINAAAFSCWLAHPDAATHAIGSVGIPANFTLEPGHATAAMFGLSGDSLMDWAAAKIPFLQK
Ga0209275_103976301	3300027884	Soil	LSGTKTRREWVRTNALNLTVRFFVNAAAFSYWLAHPGAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKAE
Ga0302227_102424111	3300028795	Palsa	KRASLSAGSKISGTKTRVEWLRTNALNLTIRLFVNAAGFSYWVAHPAAATQVIHTLGIPFNLTLEPGHATAAMFGLSGDSMVDWAAAKVPFLQKEVPATSD
Ga0302222_102191332	3300028798	Palsa	TNALGLVIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDPGTT
Ga0302226_101159373	3300028801	Palsa	IRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDPGTT
Ga0302221_102196151	3300028806	Palsa	SKISGTKTRVEWLRTNALNLTIRLFVNAAGFSYWVAHPAAATQVIHTLGIPFNLTLEPGHATAAMFGLSGDSMVDWAAAKVPFLQKEVPATSD
Ga0308309_100054574	3300028906	Soil	VRTNALNLTIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKAE
Ga0311340_113829161	3300029943	Palsa	RTIALTLAIRFFINAAAFSYWLTHPEAATHAVAAAGVPLNLTLQPDHATAALFGLSGDSMIDWAAAKVPFLQKEIPLVTVDP
Ga0311338_106749011	3300030007	Palsa	IEWMRTNALGLVIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDPGTT
Ga0302177_104570221	3300030053	Palsa	GTKTRVEWLRTNALTLVIRLVVNAAAFSYWLAHPAAATHAINAVGVPVNFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDHAPVT
Ga0302176_102712072	3300030057	Palsa	TRIEWMRTNALGLVIRLFVNAAAFSYWLAHPAAATHAISSVGIAANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDPGTT
Ga0311370_105655463	3300030503	Palsa	TLVIRLVVNAAAFSYWLAHPAAATHAINAVGVPVNFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDHAPVT
Ga0265763_10517092	3300030763	Soil	ASLSTVSRISGTKSRAQWMRTNALNLAIRFFVNAAAFSYWIAHPDAATHVIGSIGVPMNLTFEPGHATAAMFGLSGDSLIDWAAAKVPFLQKEIPAVNGSDS
Ga0302324_1016227093	3300031236	Palsa	ASLSAGSTLSGTKTRVEWLRTNALTLVIRLVVNAAAFSYWLAHPAAATHAINAVGVPVNFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDHAPVT
Ga0310686_1069858652	3300031708	Soil	VRTNALNLTIRFFIKAAEFSYWLAHPDAATHAIGSVGIPANFTLEPGHATAAMFGRSGDSLVDWAAAKIPFLQKQIPVLKTD
Ga0307474_101454701	3300031718	Hardwood Forest Soil	GSSLSGTKTRVEWLRTNALTLVIRLFVNAVAFSYWLAHPAAATHAINAVGVPANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPAIDRGPAGS
Ga0307469_101479351	3300031720	Hardwood Forest Soil	LSAESRLSGTKTRIEWLRTNALSLAIRLFVNGAAFSYWMAHPDAATHVICGIGFPVNLTLEPGHATAAMFGLSGDSMMDWAAAKVPFLQKEIPVVNQ
Ga0307477_105975932	3300031753	Hardwood Forest Soil	TKTRLEWLRTNALSLAIRLFVNAAAFSHWIAHPGAATHLFGSAGFPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0307475_101650834	3300031754	Hardwood Forest Soil	ARARFLARLRLSGTKTRLEWLRTNALSLAIRLFVNAAAFSYWIAHPGAATHFFGSAGFPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPVVND
Ga0307475_107621312	3300031754	Hardwood Forest Soil	KTRLEWLRTNALSLAIRLFVNAAAFSYWIAHPGAATQLFGSAGFPVNLTLEPGHATAAMFGLSGDSLMDWAAAKIPALQKEIPAVND
Ga0307478_107205512	3300031823	Hardwood Forest Soil	GTKTRREWVRTNALNLTIRFFVNAAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQREIPVLKVQ
Ga0335079_113768851	3300032783	Soil	QWLRTNALNLAIRLFVNAAGFSYWLAHPDAATHVIRTLGIPFDLTIEPGHAAAAMFGLSGDSMVDWAAAKVPFLQKEIPATSDS
Ga0335080_107434343	3300032828	Soil	KRASLSTASKLSGTRSRTHWLRTNALNLAIRLFVNAAGFSYWIAHPDVATQVIHTVGIPFDLALAPGHATAALFGLSGDSLVDWAAAKIPFLQKEIPPAS
Ga0335083_102918971	3300032954	Soil	NALNLAIRLFVNAAGFSYWIAHPDIATHVIHSVGIPFDLSLEPGHATAAMFGLSGDSMVDWAAAKVPFLQKEIPPDADHGFSA
Ga0335083_106818852	3300032954	Soil	RAEWLRKNAMNLAIRLFVNAAAFSYWLAHPDAATHLLNTFGLSANFTLEPGHATSAMFGLSGNSLVDWAAAKVPALQKEIPLGDP
Ga0335083_110710481	3300032954	Soil	RTNALNLAIRLFVNAAGFSYWIAHPAIATQIIHTVGIPLDLSLAPGHATAAMFGLSGDSMVDWAAAKVPFLQKEIPPCAGD
Ga0335073_115720552	3300033134	Soil	RLEWLRTNALNVAIRFFINATAFSYWLAHPDVATHAAATFGVPVNLTLDPGHATAALFGLSGDSMVDWAAAKVPFLQKEIPPATNGS
Ga0335077_102020091	3300033158	Soil	SRAQWLRTNALNLAIRLFVNAAGFSYWLAHPDAATHVVRTLGIPFDLTIEPGHAAAAMFGLSGDSMVDWAAAKVPFLQKEIPAVLPSPSGTN
Ga0335077_115197481	3300033158	Soil	ALALAIRFFINAATFSYWLAHPGAATHVLGTIGVPVNLTLEPGHATSALYGLSGDSLVDWATAKVPFLQKEVPPIEAM
Ga0370515_0166988_1_294	3300034163	Untreated Peat Soil	SAQSTLSGTKTRREWVRTNALNLTIRFFVNEAAFSYWLAHPDAATHAIGSVGIPGNFTLEPGHATAAMFGLSGDSLVDWAAAKIPFLQKEIPVLKTE
Ga0370515_0269584_95_352	3300034163	Untreated Peat Soil	VRTNALTLTIRLFVNAAAFSYWLAHPAAATHAIGAVGIPANFTLEPGHATAAMFGLSGDSLVDWAAAKVPFLQKEIPVIDRGTVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071690

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences