Metagenome Family F071829

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071829
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	69 residues
Representative Sequence	MKDSASAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLDNKGMSTNQHTSIAKAGVNVMIGIKHNDTQGIDH
Number of Associated Samples	66
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.68 %
% of genes near scaffold ends (potentially truncated)	30.58 %
% of genes from short scaffolds (< 2000 bps)	98.35 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (90.909 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (94.215 % of family members)
Environment Ontology (ENVO)	Unclassified (94.215 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (94.215 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.60% β-sheet: 0.00% Coil/Unstructured: 40.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13960	DUF4218	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
All Organisms	root	All Organisms	9.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
cellular organisms	root	All Organisms → cellular organisms	9.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	8.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	8.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	8.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	8.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	8.26 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	7.44 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	7.44 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	7.44 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	7.44 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	7.44 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	7.44 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	7.44 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	7.44 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	7.44 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	7.44 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	6.61 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	6.61 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	4.96 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	4.96 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Saccharinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae	4.13 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	0.83 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Miscanthus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus	4.13 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	0.83 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.91 %
Miscanthus lutarioriparius	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	4.13 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	0.83 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300011119\|Ga0105246_11715562	Not Available	597	Open in IMG/M
3300013297\|Ga0157378_12817279	Not Available	539	Open in IMG/M
3300014745\|Ga0157377_11401899	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	551	Open in IMG/M
3300014969\|Ga0157376_11286729	Not Available	761	Open in IMG/M
3300015267\|Ga0182122_1032169	Not Available	631	Open in IMG/M
3300015268\|Ga0182154_1020900	Not Available	710	Open in IMG/M
3300015268\|Ga0182154_1061189	Not Available	531	Open in IMG/M
3300015274\|Ga0182188_1050306	Not Available	533	Open in IMG/M
3300015275\|Ga0182172_1050030	Not Available	572	Open in IMG/M
3300015276\|Ga0182170_1016502	Not Available	774	Open in IMG/M
3300015276\|Ga0182170_1066087	Not Available	528	Open in IMG/M
3300015277\|Ga0182128_1027178	Not Available	683	Open in IMG/M
3300015277\|Ga0182128_1059981	Not Available	547	Open in IMG/M
3300015279\|Ga0182174_1080226	Not Available	513	Open in IMG/M
3300015281\|Ga0182160_1028869	Not Available	681	Open in IMG/M
3300015281\|Ga0182160_1060344	Not Available	555	Open in IMG/M
3300015282\|Ga0182124_1050175	Not Available	582	Open in IMG/M
3300015282\|Ga0182124_1080510	Not Available	506	Open in IMG/M
3300015283\|Ga0182156_1048317	Not Available	601	Open in IMG/M
3300015283\|Ga0182156_1056835	Not Available	574	Open in IMG/M
3300015285\|Ga0182186_1079086	Not Available	510	Open in IMG/M
3300015286\|Ga0182176_1078161	Not Available	518	Open in IMG/M
3300015289\|Ga0182138_1060088	Not Available	566	Open in IMG/M
3300015291\|Ga0182125_1036050	Not Available	667	Open in IMG/M
3300015291\|Ga0182125_1051736	Not Available	603	Open in IMG/M
3300015291\|Ga0182125_1076495	Not Available	537	Open in IMG/M
3300015292\|Ga0182141_1026914	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	724	Open in IMG/M
3300015292\|Ga0182141_1048356	Not Available	613	Open in IMG/M
3300015294\|Ga0182126_1059781	Not Available	580	Open in IMG/M
3300015294\|Ga0182126_1068889	Not Available	556	Open in IMG/M
3300015296\|Ga0182157_1025226	Not Available	760	Open in IMG/M
3300015296\|Ga0182157_1056575	Not Available	604	Open in IMG/M
3300015298\|Ga0182106_1047616	Not Available	636	Open in IMG/M
3300015299\|Ga0182107_1059109	Not Available	600	Open in IMG/M
3300015300\|Ga0182108_1028611	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	744	Open in IMG/M
3300015300\|Ga0182108_1102271	Not Available	509	Open in IMG/M
3300015302\|Ga0182143_1017211	Not Available	848	Open in IMG/M
3300015302\|Ga0182143_1032597	Not Available	710	Open in IMG/M
3300015302\|Ga0182143_1067286	Not Available	576	Open in IMG/M
3300015304\|Ga0182112_1100144	Not Available	511	Open in IMG/M
3300015305\|Ga0182158_1047061	Not Available	639	Open in IMG/M
3300015305\|Ga0182158_1047494	Not Available	638	Open in IMG/M
3300015305\|Ga0182158_1079843	Not Available	546	Open in IMG/M
3300015307\|Ga0182144_1031493	Not Available	728	Open in IMG/M
3300015308\|Ga0182142_1076648	Not Available	571	Open in IMG/M
3300015308\|Ga0182142_1112209	Not Available	507	Open in IMG/M
3300015314\|Ga0182140_1025913	Not Available	785	Open in IMG/M
3300015314\|Ga0182140_1083977	Not Available	557	Open in IMG/M
3300015321\|Ga0182127_1008046	Not Available	1126	Open in IMG/M
3300015321\|Ga0182127_1104671	Not Available	532	Open in IMG/M
3300015322\|Ga0182110_1077902	Not Available	584	Open in IMG/M
3300015323\|Ga0182129_1014044	Not Available	934	Open in IMG/M
3300015341\|Ga0182187_1010679	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	1324	Open in IMG/M
3300015341\|Ga0182187_1033251	Not Available	935	Open in IMG/M
3300015341\|Ga0182187_1145759	Not Available	565	Open in IMG/M
3300015342\|Ga0182109_1073619	Not Available	759	Open in IMG/M
3300015342\|Ga0182109_1139483	Not Available	602	Open in IMG/M
3300015343\|Ga0182155_1189902	Not Available	536	Open in IMG/M
3300015344\|Ga0182189_1060576	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	818	Open in IMG/M
3300015344\|Ga0182189_1151728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	589	Open in IMG/M
3300015345\|Ga0182111_1119487	Not Available	663	Open in IMG/M
3300015345\|Ga0182111_1245462	Not Available	501	Open in IMG/M
3300015346\|Ga0182139_1117696	Not Available	667	Open in IMG/M
3300015346\|Ga0182139_1134740	Not Available	634	Open in IMG/M
3300015347\|Ga0182177_1221302	Not Available	526	Open in IMG/M
3300015351\|Ga0182161_1046651	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	983	Open in IMG/M
3300015351\|Ga0182161_1099669	Not Available	741	Open in IMG/M
3300015351\|Ga0182161_1152390	Not Available	630	Open in IMG/M
3300015351\|Ga0182161_1155897	Not Available	624	Open in IMG/M
3300015355\|Ga0182159_1128026	Not Available	775	Open in IMG/M
3300015355\|Ga0182159_1129303	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	772	Open in IMG/M
3300015355\|Ga0182159_1333134	Not Available	514	Open in IMG/M
3300015361\|Ga0182145_1186160	Not Available	510	Open in IMG/M
3300017404\|Ga0182203_1139217	Not Available	531	Open in IMG/M
3300017404\|Ga0182203_1161747	Not Available	504	Open in IMG/M
3300017407\|Ga0182220_1055192	Not Available	609	Open in IMG/M
3300017407\|Ga0182220_1059258	Not Available	597	Open in IMG/M
3300017407\|Ga0182220_1086838	Not Available	536	Open in IMG/M
3300017407\|Ga0182220_1103363	Not Available	509	Open in IMG/M
3300017410\|Ga0182207_1072340	Not Available	678	Open in IMG/M
3300017410\|Ga0182207_1076017	Not Available	667	Open in IMG/M
3300017411\|Ga0182208_1043726	Not Available	702	Open in IMG/M
3300017411\|Ga0182208_1054052	Not Available	659	Open in IMG/M
3300017415\|Ga0182202_1029347	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	816	Open in IMG/M
3300017420\|Ga0182228_1039759	Not Available	781	Open in IMG/M
3300017420\|Ga0182228_1076625	Not Available	608	Open in IMG/M
3300017424\|Ga0182219_1062398	Not Available	647	Open in IMG/M
3300017425\|Ga0182224_1085839	Not Available	621	Open in IMG/M
3300017425\|Ga0182224_1096743	Not Available	599	Open in IMG/M
3300017425\|Ga0182224_1122981	Not Available	555	Open in IMG/M
3300017427\|Ga0182190_1093280	Not Available	612	Open in IMG/M
3300017427\|Ga0182190_1119214	Not Available	563	Open in IMG/M
3300017427\|Ga0182190_1124433	Not Available	555	Open in IMG/M
3300017427\|Ga0182190_1157835	Not Available	510	Open in IMG/M
3300017430\|Ga0182192_1061163	Not Available	720	Open in IMG/M
3300017436\|Ga0182209_1125918	Not Available	559	Open in IMG/M
3300017438\|Ga0182191_1047695	Not Available	785	Open in IMG/M
3300017438\|Ga0182191_1112916	Not Available	593	Open in IMG/M
3300017438\|Ga0182191_1113624	Not Available	591	Open in IMG/M
3300017438\|Ga0182191_1134069	Not Available	559	Open in IMG/M
3300017438\|Ga0182191_1172976	Not Available	512	Open in IMG/M
3300017442\|Ga0182221_1103745	Not Available	588	Open in IMG/M
3300017443\|Ga0182193_1151612	Not Available	552	Open in IMG/M
3300017443\|Ga0182193_1186354	Not Available	512	Open in IMG/M
3300017680\|Ga0182233_1049118	Not Available	744	Open in IMG/M
3300017682\|Ga0182229_1029699	Not Available	958	Open in IMG/M
3300017684\|Ga0182225_1091445	Not Available	580	Open in IMG/M
3300017684\|Ga0182225_1095536	Not Available	572	Open in IMG/M
3300017684\|Ga0182225_1107279	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	552	Open in IMG/M
3300017684\|Ga0182225_1133355	Not Available	516	Open in IMG/M
3300017685\|Ga0182227_1131353	Not Available	509	Open in IMG/M
3300017686\|Ga0182205_1129772	Not Available	553	Open in IMG/M
3300017689\|Ga0182231_1045746	Not Available	820	Open in IMG/M
3300017690\|Ga0182223_1018386	Not Available	844	Open in IMG/M
3300017690\|Ga0182223_1059544	Not Available	618	Open in IMG/M
3300017690\|Ga0182223_1065954	Not Available	600	Open in IMG/M
3300025942\|Ga0207689_10557027	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	963	Open in IMG/M
3300025942\|Ga0207689_10667358	Not Available	876	Open in IMG/M
3300026089\|Ga0207648_11693075	Not Available	594	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	94.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.48%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	94.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.48%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	94.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.48%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	94.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105246_117155621	3300011119	Miscanthus Rhizosphere	MKDSASAQNTIVAFYREYSRFCYLYFTIGKQWSKDLLNIKGVSISQHTSMARLGVKVMIGIKDNDTQGVDL*
Ga0157378_128172792	3300013297	Miscanthus Rhizosphere	MKDSTSAHNTIVAFYREYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL*
Ga0157377_114018991	3300014745	Miscanthus Rhizosphere	MKDSTSAQNTTVAFYRDYSRYRYLYFTIGKQWSKDLLSNREMSTNQHTNIAKAGVNVMIGIKHNDTQRIGH*
Ga0157376_112867292	3300014969	Miscanthus Rhizosphere	MKDSASAQNTIVAFYREYSWYRYLYFTTGKQWSKDLLNIIGVSISQHTSKARAGVKVMIGIKDNETQGVDL*
Ga0182122_10321691	3300015267	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYFRYRYLYFTIGKQWSKDLLSNRGMSTNQHTSIAKVGVNVMIGIKHNDTQGIDH*
Ga0182154_10209001	3300015268	Miscanthus Phyllosphere	IKNSASAHNTIVAFYWEYSRYSYFYFTIEKQWSKDLLNIKGVSISQHTNMARAGVKVMIGIKDNDT*
Ga0182154_10611891	3300015268	Miscanthus Phyllosphere	MDVVDVCECKYNTKDSASAQNISVAFHRMYSRYRYLYFTTGKQWNKDLLSNKEITINQHTSIARARVNVVIGIRHNDTQGINL*
Ga0182188_10503062	3300015274	Miscanthus Phyllosphere	MKDSASAHNTIVTFYRKYSRYRYLYFTIGKQWSKDLLNIKGVFISQHTSMAKAGVKVMIGIKDNDTHGVDL*
Ga0182172_10500301	3300015275	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL*
Ga0182170_10165021	3300015276	Miscanthus Phyllosphere	MKDSASSRNTIVAFYREYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDT*
Ga0182170_10660871	3300015276	Miscanthus Phyllosphere	CECKCNIKDSASAQNISVAFHREYSRYRYLYFTIGKQWNKDLLSNKGISVSQHTSITRAGVNIMIGFKHNDNQGIDH*
Ga0182128_10271781	3300015277	Miscanthus Phyllosphere	MKDFASAQNTIVAFYREYSKYHYLYFTTGKQWSKDLLDNKRMSTNQHTNIAKAGVNVMIGIKHNDTQGIDH*
Ga0182128_10599811	3300015277	Miscanthus Phyllosphere	MKDSVSAQNTIVAFYREYSRYRYLYFIIGKQWNKDLLDYKGMSISQHTSIAKAGVNVMIRIKHNDTQGIDH*
Ga0182174_10802261	3300015279	Miscanthus Phyllosphere	ASAQNTIVAFYREYSRYRYLYFTTGKQLNKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL*
Ga0182160_10288691	3300015281	Miscanthus Phyllosphere	VPEMRVDISYAQVDTSTSAQNIVIAFHLGVFQGIIIYIFTTEKQWSKDLLSNRGMSTNQHTSIAKARVNVMIGIKHNDTQGIDH*
Ga0182160_10603441	3300015281	Miscanthus Phyllosphere	MKNSASTQNTIVAFYRAYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSVARARLKVMIEIKVNDTQGVDL*
Ga0182124_10501751	3300015282	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYLYLYFTIEKQWSKDLLSNKGVTTNQHTSIARVGVNVMIGIMYNDTQGINQ*
Ga0182124_10805101	3300015282	Miscanthus Phyllosphere	IVAFYREYSRYSYLYFTTGKQWSKDLLNFKGVSISQHTSMARAGVKVMIGIKDNDIRG*
Ga0182156_10483171	3300015283	Miscanthus Phyllosphere	MKDSTSAQNTIVTFYREYSRYRYLYFTTGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKVNDTQGVDL*
Ga0182156_10568351	3300015283	Miscanthus Phyllosphere	KNISVAFHREYFRYHYLYFTIGKQWNKYLLSNKGISISQHTSMARAGVNVMIGFKHNNTQGIDH*
Ga0182186_10790861	3300015285	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYFITGKQWSKDILSNKGMSIDQHTSIAKAEVNVMIGIKHNDTQGIDH*
Ga0182176_10781611	3300015286	Miscanthus Phyllosphere	MRNSASVQNTIVVFYREYSRYRYLYFTTGKQWSKDLLDNKGMSTNQHTSIAKVGINVMIYV*
Ga0182138_10600881	3300015289	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYFRYCYLYFTTGKQWSKDLLNIKVSISQHTSMARAGVKVMIEIKDNDTQGVDL
Ga0182125_10360501	3300015291	Miscanthus Phyllosphere	MKDSTSAQNTIVAFYREYSRYHYLYFTTRKQWSKDLLSNRGMSTNQHTNIARAGVNIMIGIKHNDTQGIDH*
Ga0182125_10517361	3300015291	Miscanthus Phyllosphere	MKDSASAQNTIIAFYREYSRYRFLYFTIGKQWSKDLLSNKGISISQHSSMARAGVNVMIGIRHNGTQGIDR*
Ga0182125_10764951	3300015291	Miscanthus Phyllosphere	MKDSRSAHNTIVAFYREYSRYRYLYFTTGKQRSKDLLDNKGISTNQHTSIAKAGVNVMIGMKHNDT*
Ga0182141_10269141	3300015292	Miscanthus Phyllosphere	MKDSASAQNTIVVFYREYSKYRYLYFTTGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIMDNDTQGVDL*
Ga0182141_10483561	3300015292	Miscanthus Phyllosphere	NMKDFASAQNTIVAFYREYSRYRYLYFTIGKHYSKDLLSNKGISISQHTSIAKVGVNVMIGIKHKDT*
Ga0182126_10597811	3300015294	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKVNDTQGVDL*
Ga0182126_10688891	3300015294	Miscanthus Phyllosphere	MKNSASTQNTIVAFYRAYSRYRYLYFTIGKQWSKDLLNIKEVSISQHTSVARARLKVMIGIKVNDTQGVDL*
Ga0182157_10252261	3300015296	Miscanthus Phyllosphere	MKDSTSAQNTIVAFYREYFRYRYLYFTIGKQWSKDLLDNKGMSTNQHTSIAKAGVNVIIGIRHNDILGIDH*
Ga0182157_10565751	3300015296	Miscanthus Phyllosphere	MKDSASAQNTIVAFYQEYFRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARARVKLMIEIKDNDTQGVDL*
Ga0182106_10476161	3300015298	Miscanthus Phyllosphere	MKDHVSAKNTIVTFYREYSRYRYLYFTTGKQWSKDLLNINGVSISQHTSMARVGVKVTIGIKDNDTQGVDL*
Ga0182107_10591091	3300015299	Miscanthus Phyllosphere	MKDSVSAQNIIVAFYWEYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARVGVKVMIGIKDNDTQGVDL*
Ga0182108_10286112	3300015300	Miscanthus Phyllosphere	MKDSARAHNTIVAFYQEYSRYRYLYFTTGKQWSKDLLDNKTMSTNQHTSIAKAGVNVLIG
Ga0182108_11022711	3300015300	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLSNRGMSTNQHTSIAKAGVNVMIGIKHNDTQGIDH*
Ga0182143_10172112	3300015302	Miscanthus Phyllosphere	MKDSASIHNTIVAFYQEYSRYRYLYFTIGKQWSKDLLDNKGMSTNQHTSIAKAGVNVMIGIKHNDTQ
Ga0182143_10325971	3300015302	Miscanthus Phyllosphere	FYQEYSRYCYLYFTIGKQWSKDLLNIKGVSISQHNSMARAGVKVMMGIKDNNTQGVDL*
Ga0182143_10672861	3300015302	Miscanthus Phyllosphere	MKDSASAQNTIVPFYLEYSRYRYLYFTTGKQRSKDLLSNKGISISQHSSMARAGVQVMIGIRNNG
Ga0182112_11001441	3300015304	Miscanthus Phyllosphere	MKDSTTAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLDNKRMSTNQHTNIAKAGVNVMIG
Ga0182158_10470611	3300015305	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYHYLYFTTGKQWSKDLLNIKGVSISQHTSIARAGVKVMIGIKVNDT*
Ga0182158_10474941	3300015305	Miscanthus Phyllosphere	TQNISVDFHRKYSRYRYLYFTTEKQWNKDLLSNKEISISQHTSMARAGVNVMIGFKHNNTQGIDH*
Ga0182158_10798431	3300015305	Miscanthus Phyllosphere	MKDSTSAQNTIVAFYREYSRYRYLYFTTEKQWSKDLLDNKGMSTNQHTSIAKTGVNVMIGIKHNDTQGIGH*
Ga0182144_10314932	3300015307	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYLYLYFTIEKQWSKDLLSNKGVTTNQHTTIARVGVNVMIGIMYNDTQGINQ*
Ga0182142_10766481	3300015308	Miscanthus Phyllosphere	MKDSVSTQNTIVAFYRDYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL*
Ga0182142_11122091	3300015308	Miscanthus Phyllosphere	MKDSVSAHNTIIAFYRDYSRYRYLYFTVGKQWSKDLLDNKGMSTNQHTSIAKAWVNVMIGIKHNDTQGIDH*
Ga0182140_10259132	3300015314	Miscanthus Phyllosphere	MKDFARAQNTIVEFYQEYSRYHYLYFTTGKQWSKDLMNIKGVSINQHTSMARAGVKIMILRGEIYKIT*
Ga0182140_10839771	3300015314	Miscanthus Phyllosphere	MKDSASAQNTIVAFYQEYSRYHYLYFTIGKQWSKDLLDNKVMSTNQHTSIARAGVNVMIGFM*
Ga0182127_10080461	3300015321	Miscanthus Phyllosphere	MKDSASAQNTIIAFYREYSWYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGIDL*
Ga0182127_11046711	3300015321	Miscanthus Phyllosphere	VAFHQEYSRYRYLYFTTGKQWSKDLLSNKGISISQHTSMARAGVNVMIGFKHNNTQGIDH
Ga0182110_10779021	3300015322	Miscanthus Phyllosphere	MKDSASAQNTIIVFYQEYSKYRYLYLQWSKDLLDNKGMFTNQHTSIAKERVNVMIGIKHNDTHVIDH*
Ga0182129_10140441	3300015323	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSMYHYLYFTTRKQWSKDLLDNKGMFTNQHTSIAKAGVNVMIRIKHNDTQGIDH*
Ga0182187_10106791	3300015341	Miscanthus Phyllosphere	MKDSASAQNTTVAFYREYSKYRYLYFTTWKQWSKDLLDNKGMSTNQHNSIAKVGVNVMIGIKHND
Ga0182187_10332512	3300015341	Miscanthus Phyllosphere	NMKDSISTQNTIVAFYQKYSRYHYLYFTIGKQCNKDLLSNKGISISQHTSMARAGVNVMIGFKQNNTQGIDH*
Ga0182187_11457591	3300015341	Miscanthus Phyllosphere	MKDSASAQNTIVSFYQEYSRYRYLFFTIGKQWSKDLLKIKGVSNSQHTSMARAGVKVMIGIKDNDTQGVDL*
Ga0182109_10736191	3300015342	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLSNRGMSTNQHTSIAKTGVNVMLGIKYNDTIGIDH*
Ga0182109_11394831	3300015342	Miscanthus Phyllosphere	MKDSASAQNVIVTFYWKYSRYHYLYFTTGKQWSKDLLDNKVISTNLHTSIAKAGVNVMIGIKPNDTQGIDH*
Ga0182155_10144902	3300015343	Miscanthus Phyllosphere	MKDSASAQNTIVSFYQEYSRYRYLFFTIGKQWSKDLLKIKGVSNSQHTSIARAGVNVMIGFM*
Ga0182155_11899021	3300015343	Miscanthus Phyllosphere	NMKDSTSTQNTIVVFYWENSRYHYLYFTTRKQWSKDLLSNKGMSTNQHTYIAKVGVNVMIGIKHNDTQGIDH*
Ga0182189_10605762	3300015344	Miscanthus Phyllosphere	MKDSASAQNTTVAFYREYSKYRYLYFTTWKQWSKDLLDNKGMSTNQHNSIAKVGVNVMIGIKHNDTQGIDH*
Ga0182189_11517281	3300015344	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLDNKGMSTNQHTNIAKAGVNVMIGIKH
Ga0182111_11194872	3300015345	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSKFRYLYFTTGKQWSEDLLDNKGMSTNQHTSIAKAGVNVKIGIKQNDTQGIDH*
Ga0182111_12454621	3300015345	Miscanthus Phyllosphere	MKDSASAQSTIVTFYWEYSKYRYLYFTTGKQWSKDLLDNKGMYTNQHTSIAQAGVNVMIGIKHNDTQGIDH*
Ga0182139_11176961	3300015346	Miscanthus Phyllosphere	MDVVDVCECKYNTKDSASAQNISVAFHRMYSRYRYLYFTTGKQWNKDFLDNKGISTNQHISIARVGVN
Ga0182139_11347401	3300015346	Miscanthus Phyllosphere	MKDSASAQNTIVAFYGEYSRYRYLYFTTGKQWCKDLLDNKRISTNQHTSIAKVGVNVMIGVKHNDTQGIDH*
Ga0182177_12213021	3300015347	Miscanthus Phyllosphere	MKYSASAQNTIVALYQEYSRYHYLYFTTWKQWSKDLLDNKGMSTNQHTSIAKAGVNVMIGIKHNDTQGIDY*
Ga0182161_10466512	3300015351	Miscanthus Phyllosphere	MKDSARAHNTIVAFYQEYSRYRYLYFTTGKQWSKDLLDNKGMSTNQHTNIAKAGVNVMIGIKHDDTKGIDH*
Ga0182161_10996691	3300015351	Miscanthus Phyllosphere	MKNSVSAQNTIVAFYREYSRYRYLYFTIGKQSKDLLNIKGVSIRQHTNMARVGVKVMIGIKVNDTQGVGL
Ga0182161_11523901	3300015351	Miscanthus Phyllosphere	MKDSASAQNIIVAFYREYSRYRYLYFTIGKQWSKDLLNIKGVSIRQHTSMARVGVKVMIGIKDNDTQGMDL*
Ga0182161_11558972	3300015351	Miscanthus Phyllosphere	MKDSTSVHNTIVAFYREYSKYRYLYFTTGKQWSKDLLDNKRMSTNQHTNIAKAGVNVMIGIKHNDTQGIDH*
Ga0182159_11280262	3300015355	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYCWYHYLYFTTEKQWSKDLLSNKGVTTNQHTSIARVGVNVMIGIMYNDTQGINQ*
Ga0182159_11293031	3300015355	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRCRYLYFTIGKQWSKDLLNIKGVYISQHTSMARAGVKVMIGIKVN
Ga0182159_13331341	3300015355	Miscanthus Phyllosphere	MKISVSAQNTIVAFYREYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIG
Ga0182145_11861601	3300015361	Miscanthus Phyllosphere	MKDSVSAQNIIVAFYQEYSRYRYLYFTTRKQWSKDLLDNKGMSTNQYTSIAKAGVNIMIGIKHNDTQGIDH*
Ga0182203_11392171	3300017404	Miscanthus Phyllosphere	MKDSVSAQNTIVAFYREYSRYRYFYFTTGKQWNKDFLNIKGVSISQHTSMARAWVKVVIGIKVNDTQGVDL
Ga0182203_11617471	3300017404	Miscanthus Phyllosphere	ASAQTTSVAFHGEYSRYHYLCFTIGKPWNKDLLGNKEITINRHTSIARAGVNVMIEIRHNDT
Ga0182220_10551921	3300017407	Miscanthus Phyllosphere	MKDSTSTQNTIVAFYREYSKYRYLYFTTGKQWSKDLLSNRGTSANQHTNRAKPRVNVMIG
Ga0182220_10592581	3300017407	Miscanthus Phyllosphere	SAQNTIVAFYRKYSRYRYLYFTTGKQWSKDLLSNKGMSTNQHTSIAKAGVNVMIGIKHNDTQGIGH
Ga0182220_10868382	3300017407	Miscanthus Phyllosphere	MKDSASAQNTIVAFYQEYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGIDL
Ga0182220_11033631	3300017407	Miscanthus Phyllosphere	MKDSASTQNTIVAFNREYSRYHYLSFTTGKQWNKDLLNIKGVSISQHTSMARAGVNVMIGFKHNNTQGIDH
Ga0182207_10723401	3300017410	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYFRYRYFYFTTWKQWNKDLLNNEGMSTNQHTGMTRAEVNIKIGIKHNDT
Ga0182207_10760171	3300017410	Miscanthus Phyllosphere	MKDSTSAHNTIVAFYREYSRYYCLYFTIGKHWSKDLLDNKGMSTNQHTSIAKAGVNVMIGIKHNDTQGIDH
Ga0182208_10437261	3300017411	Miscanthus Phyllosphere	MKDSASAQKTIVAFYQEYSRYRYLYFTIGKQWSKDLLDNKRISTNQHTSIAKVGVNVMIGVKHNDTQGIDH
Ga0182208_10540521	3300017411	Miscanthus Phyllosphere	MKDSTNAQNTIVAFYREYSRYRYLYFTIRKQWSKDLLSNKGMSTYQHTSIAKAGVNVMIGIKHNDTQGI
Ga0182202_10293472	3300017415	Miscanthus Phyllosphere	MKDSISAHNTIVAFYRKYSMYRYLYFTIGKQWNKDFLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGIDH
Ga0182228_10397592	3300017420	Miscanthus Phyllosphere	MKDSASAQNTIVAFYGEYSKYRYLYFTIGKQWCKKILDNKRMSTNQHINIANVGVNLMIGVKHNDTQGIG
Ga0182228_10766252	3300017420	Miscanthus Phyllosphere	MKDSASAQNTTVAFYREYSKYRYLYFTTWKQWSKDLLDNKGMSTNQHNSIAKVGVNVMIGIKHNDTQGIDH
Ga0182219_10623982	3300017424	Miscanthus Phyllosphere	MKDSTSAQNTIVTFYREYSRYRYLYFTTGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL
Ga0182224_10858391	3300017425	Miscanthus Phyllosphere	MKDSASAQNTIVAFYQEYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL
Ga0182224_10967431	3300017425	Miscanthus Phyllosphere	MKDSVSAQNTIVAFYREYSRYRYLYFTIGKQWSKDLLDNKGMSTNQHTSIAKAGVNV
Ga0182224_11229811	3300017425	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYFITGKQWSKDLLDNKGMSINQHTSIAKAGMNVMIGIKHNDTQGIDH
Ga0182190_10932801	3300017427	Miscanthus Phyllosphere	SAQNTIVAFYREYSIYRYLYFTTGKQWSKDLLNIKGVSISQHISMARAGVKVMIGIKVNDTMG
Ga0182190_11192141	3300017427	Miscanthus Phyllosphere	VAFYREYSRYRYLYFTIGKQWSKKLIVHHHVSTNQHTNIARAGINVMIGIMHSDTQGIYHEL
Ga0182190_11244331	3300017427	Miscanthus Phyllosphere	MKNYAGTQNTIVAFYQEYSRYCYLYFTIGKQWSKDLLNIKGVSISQHNSMARAGVKVMMGIKDNNTQGVDL
Ga0182190_11578351	3300017427	Miscanthus Phyllosphere	DSTSAQNTIVAFYQEYSRYRYLYFTTRKQWSKDLLCNKGISINQHTSIARVGINVMIGIMYNDTQGINQ
Ga0182192_10611631	3300017430	Miscanthus Phyllosphere	MKDSASAQNTIVSFYQEYSRYRYLFFTIGKQWSKDLLKIKGVSNSQHTSMARAGVKVMIGIKDNDTQGVDL
Ga0182209_11259181	3300017436	Miscanthus Phyllosphere	MKDSASAQNTIVAFYRECYRYRYLYFTTRKQWSKDLLDNKGMSTNQYTSIAKAGVNILIEIKHNDTQGINH
Ga0182191_10476952	3300017438	Miscanthus Phyllosphere	MDVVDVCECKYNTKDSASAQNISVAFHRMYSRYRYLYFTTGKQWNKDLLSNKEITINQHTSIARAGVNVVIGIRHNDIQGINL
Ga0182191_11129161	3300017438	Miscanthus Phyllosphere	MKDSASAHNTIVAFYREYSRYYCLYFTIGKHWSKDLLDNKGMSTNQHTSIAKAGVNVMIGTM
Ga0182191_11136241	3300017438	Miscanthus Phyllosphere	NIKDSVSAQNIIVAFYREYYRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARVGVKVMIGIKDNDTQGVDL
Ga0182191_11340691	3300017438	Miscanthus Phyllosphere	MKYFTSAQNTIVAFYQEYSRYRYLYFTTGKQWSKDLLSNRGMSTNRHTNIAKAGVNVMIGIKHNDTQGLDH
Ga0182191_11729762	3300017438	Miscanthus Phyllosphere	MKDSVSAQNTIIAFYKEHYRYCYLCFTIGKQWSKDLLDKKGMSTNQHTSIAKAGVNVMIGIKHNDT
Ga0182221_11037451	3300017442	Miscanthus Phyllosphere	MKNSASAQNTIVAFYQEYSRYHYLYFTTGKQWSKDLMNIKGVSINQHTSMARVGVKVM
Ga0182193_11516121	3300017443	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYFITGKQYGKYLLDNKGISTNQHTNIARVGVNVMIRIYV
Ga0182193_11863541	3300017443	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYFKCRYLYFTIGKQWSKDLLNIKEVSISQHTSMARAGVKVMIGIKQNEARWIDH
Ga0182233_10491181	3300017680	Miscanthus Phyllosphere	MKDSARAQNTIVAFYREYSRYRYLYFTIGKQWSKDLLNINGVSISQHTSMARAGVKVMIGIK
Ga0182229_10296991	3300017682	Miscanthus Phyllosphere	MKNSVSAQNTIVAFYREYFRYRYLYFTIEKQWSKDLFNIKGVSISQHTNMARAGVKVMIGIKVNDTQGLNL
Ga0182225_10914451	3300017684	Miscanthus Phyllosphere	MKDSVSAQNTIVAFYREYSRYRYFYFTTGKQWNKDFLNIKGVSISQHTSIAKVWVNVMIGIKHNDTQGIDH
Ga0182225_10955361	3300017684	Miscanthus Phyllosphere	MKDSASAQNTIVAFYQEYSRYHYLYFTIGKQWSKYLLNNKGMSTNQYTSIAKARVNVMIGIKPNDT
Ga0182225_11072791	3300017684	Miscanthus Phyllosphere	MKDSANIRNTIVALYREYSRYRYLYFTTGKQWNKDLLSNKEITINQHTSIARARVNVVIGIRHNDTQGIN
Ga0182225_11333551	3300017684	Miscanthus Phyllosphere	MRDSASAQNTILAFYQEYSRYRYLFFTIGKQWSKDLLKIKGVSNSQHTSMARAGVKVMIGIKDNDT
Ga0182227_11313531	3300017685	Miscanthus Phyllosphere	MKNSTSAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL
Ga0182205_10928081	3300017686	Miscanthus Phyllosphere	IVAFYQEYSRYHYLYFTIGKQWSKYLLNNKGMSTNQYTSIAKARVNVMIGIKPNDT
Ga0182205_11297721	3300017686	Miscanthus Phyllosphere	MKDSASAQNTIVAFYREYSRYRYLYLTTGKQWRKDLMNIKGVSINQHTSMARAEVKVMIEIKVNDT
Ga0182231_10457461	3300017689	Miscanthus Phyllosphere	MKDYTCAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL
Ga0182223_10183861	3300017690	Miscanthus Phyllosphere	MKDSASTQNTIVAFYGEYSKYRYLYFTTEKQWSKDLLDNKGMSTNQHTSIAKAGVNVIIGIKHNDMNERY
Ga0182223_10595441	3300017690	Miscanthus Phyllosphere	IAFYLEYSRYHYLYFIIGKQWSKDLLSNKGMSTYQHTSIAKAGVNVMIGIKHNDTKG
Ga0182223_10659541	3300017690	Miscanthus Phyllosphere	MKDSTSVHNTIVAFYQEYFKYRYLYFTTGKQWSKDLLDNKRMSTNQHTNIAKAGVNVMIGIK
Ga0207689_105570273	3300025942	Miscanthus Rhizosphere	MKDSASAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLNIKGASIYQHTSMARAGVKVMIGIKDNDTQGVDL
Ga0207689_106673581	3300025942	Miscanthus Rhizosphere	MKDSASAQNTIVAFYREYSRYRYLYFTTGKQWSKDLLDNKGMSTNQHTSIAKAGVNVMIGIKHNDTQGIDH
Ga0207648_116930751	3300026089	Miscanthus Rhizosphere	MKDSASAQNTIVAFYREYSRYRYLYFTIGKQWSKDLLNIKGVSISQHTSMARAGVKVMIGIKDNDTQGVDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071829

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences