Metagenome Family F072167

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072167
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	72 residues
Representative Sequence	MKCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWQMVWACREARYRATYRPVK
Number of Associated Samples	61
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.48 %
% of genes near scaffold ends (potentially truncated)	51.24 %
% of genes from short scaffolds (< 2000 bps)	73.55 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.207 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (78.512 % of family members)
Environment Ontology (ENVO)	Unclassified (76.860 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.339 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.35% β-sheet: 2.02% Coil/Unstructured: 62.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF05593	RHS_repeat	2.48
PF07238	PilZ	2.48
PF14255	Cys_rich_CPXG	2.48
PF01904	DUF72	2.48
PF08308	PEGA	1.65
PF02517	Rce1-like	1.65
PF14534	DUF4440	1.65
PF06452	CBM9_1	1.65
PF00589	Phage_integrase	0.83
PF13414	TPR_11	0.83
PF00885	DMRL_synthase	0.83
PF01381	HTH_3	0.83
PF13181	TPR_8	0.83
PF14081	DUF4262	0.83
PF04326	AlbA_2	0.83
PF08269	dCache_2	0.83
PF12844	HTH_19	0.83
PF01068	DNA_ligase_A_M	0.83
PF13185	GAF_2	0.83
PF00584	SecE	0.83
PF00092	VWA	0.83
PF03703	bPH_2	0.83
PF00805	Pentapeptide	0.83
PF14355	Abi_C	0.83
PF06537	DHOR	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.48
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	2.48
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.65
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.65
COG0054	6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain)	Coenzyme transport and metabolism [H]	0.83
COG0690	Preprotein translocase subunit SecE	Intracellular trafficking, secretion, and vesicular transport [U]	0.83
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.83
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.83
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.83
COG2443	Preprotein translocase subunit Sss1	Intracellular trafficking, secretion, and vesicular transport [U]	0.83
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.83
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.83
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.83
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.21 %
Unclassified	root	N/A	23.14 %
Viruses	superkingdom	All Organisms → Viruses	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.21 %
Unclassified	root	N/A	23.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.77 %
Unclassified	root	N/A	23.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.07 %
Unclassified	root	N/A	23.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.41 %
Unclassified	root	N/A	23.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.41 %
Unclassified	root	N/A	23.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.41 %
Unclassified	root	N/A	23.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.83 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.41 %
Unclassified	root	N/A	23.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.83 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101326627	Not Available	611	Open in IMG/M
3300002915\|JGI25387J43893_1068167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005171\|Ga0066677_10314770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300005174\|Ga0066680_10879257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005176\|Ga0066679_11011387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005180\|Ga0066685_10202164	All Organisms → cellular organisms → Bacteria → Acidobacteria	1363	Open in IMG/M
3300005445\|Ga0070708_100030565	All Organisms → cellular organisms → Bacteria → Acidobacteria	4656	Open in IMG/M
3300005451\|Ga0066681_10001374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9683	Open in IMG/M
3300005554\|Ga0066661_10004852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6197	Open in IMG/M
3300005559\|Ga0066700_10070103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2220	Open in IMG/M
3300005559\|Ga0066700_10997965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300005568\|Ga0066703_10219025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300006050\|Ga0075028_100782825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300006796\|Ga0066665_10121723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1945	Open in IMG/M
3300007265\|Ga0099794_10443306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300007265\|Ga0099794_10638577	Not Available	565	Open in IMG/M
3300009038\|Ga0099829_10277251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1371	Open in IMG/M
3300009088\|Ga0099830_10529694	Not Available	963	Open in IMG/M
3300009090\|Ga0099827_10164276	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300009090\|Ga0099827_11244151	Not Available	647	Open in IMG/M
3300009090\|Ga0099827_11294083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300009143\|Ga0099792_11264754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300011269\|Ga0137392_10567143	Not Available	943	Open in IMG/M
3300012096\|Ga0137389_10008135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6865	Open in IMG/M
3300012096\|Ga0137389_10781902	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300012096\|Ga0137389_11305134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300012189\|Ga0137388_10702461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300012189\|Ga0137388_11960567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300012198\|Ga0137364_10003146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8462	Open in IMG/M
3300012198\|Ga0137364_10013181	All Organisms → cellular organisms → Bacteria	4821	Open in IMG/M
3300012198\|Ga0137364_10021551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3973	Open in IMG/M
3300012198\|Ga0137364_10043062	Not Available	2967	Open in IMG/M
3300012198\|Ga0137364_10237828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343	Open in IMG/M
3300012198\|Ga0137364_10274627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1248	Open in IMG/M
3300012198\|Ga0137364_11386618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012199\|Ga0137383_10526368	Not Available	865	Open in IMG/M
3300012200\|Ga0137382_10404813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300012202\|Ga0137363_10000903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16683	Open in IMG/M
3300012202\|Ga0137363_10038484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3358	Open in IMG/M
3300012202\|Ga0137363_10048750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3025	Open in IMG/M
3300012202\|Ga0137363_10107130	Not Available	2135	Open in IMG/M
3300012202\|Ga0137363_10365057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300012202\|Ga0137363_10906260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300012203\|Ga0137399_10033329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3576	Open in IMG/M
3300012203\|Ga0137399_10050914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3007	Open in IMG/M
3300012203\|Ga0137399_10771433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300012203\|Ga0137399_10934989	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300012203\|Ga0137399_10987617	Not Available	709	Open in IMG/M
3300012203\|Ga0137399_11062364	Not Available	682	Open in IMG/M
3300012203\|Ga0137399_11685381	Not Available	522	Open in IMG/M
3300012203\|Ga0137399_11783894	Not Available	504	Open in IMG/M
3300012205\|Ga0137362_10057201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3197	Open in IMG/M
3300012206\|Ga0137380_11600675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300012208\|Ga0137376_10157018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1959	Open in IMG/M
3300012208\|Ga0137376_10186621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1792	Open in IMG/M
3300012208\|Ga0137376_10605608	Not Available	948	Open in IMG/M
3300012211\|Ga0137377_10003758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11838	Open in IMG/M
3300012211\|Ga0137377_10289748	Not Available	1571	Open in IMG/M
3300012211\|Ga0137377_10709476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300012285\|Ga0137370_10001086	All Organisms → cellular organisms → Bacteria → Acidobacteria	11055	Open in IMG/M
3300012285\|Ga0137370_10165241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1286	Open in IMG/M
3300012285\|Ga0137370_10222175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300012285\|Ga0137370_10695485	Not Available	631	Open in IMG/M
3300012361\|Ga0137360_10065107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2677	Open in IMG/M
3300012361\|Ga0137360_10347305	All Organisms → cellular organisms → Bacteria → Acidobacteria	1241	Open in IMG/M
3300012361\|Ga0137360_10783458	Not Available	820	Open in IMG/M
3300012361\|Ga0137360_10922085	Not Available	753	Open in IMG/M
3300012363\|Ga0137390_10353088	All Organisms → cellular organisms → Bacteria → Acidobacteria	1451	Open in IMG/M
3300012363\|Ga0137390_10399236	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300012582\|Ga0137358_10216372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	1306	Open in IMG/M
3300012582\|Ga0137358_11008930	Not Available	538	Open in IMG/M
3300012685\|Ga0137397_10001433	All Organisms → cellular organisms → Bacteria → Acidobacteria	16664	Open in IMG/M
3300012685\|Ga0137397_10023015	All Organisms → cellular organisms → Bacteria → Acidobacteria	4395	Open in IMG/M
3300012917\|Ga0137395_10105278	All Organisms → Viruses → Predicted Viral	1880	Open in IMG/M
3300012917\|Ga0137395_10461329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300012917\|Ga0137395_10705561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300012918\|Ga0137396_10008823	All Organisms → cellular organisms → Bacteria → Acidobacteria	6077	Open in IMG/M
3300012918\|Ga0137396_10036265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	3303	Open in IMG/M
3300012918\|Ga0137396_10802520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300012918\|Ga0137396_11025126	Not Available	596	Open in IMG/M
3300012922\|Ga0137394_10000901	All Organisms → cellular organisms → Bacteria	20937	Open in IMG/M
3300012922\|Ga0137394_11222009	Not Available	615	Open in IMG/M
3300012923\|Ga0137359_11795893	Not Available	500	Open in IMG/M
3300012925\|Ga0137419_10014616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4390	Open in IMG/M
3300012925\|Ga0137419_10069808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2336	Open in IMG/M
3300012925\|Ga0137419_10312137	All Organisms → cellular organisms → Bacteria → Acidobacteria	1206	Open in IMG/M
3300012925\|Ga0137419_10378190	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
3300012925\|Ga0137419_10890944	Not Available	732	Open in IMG/M
3300012925\|Ga0137419_11174364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300012925\|Ga0137419_11557055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300012927\|Ga0137416_10011735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5282	Open in IMG/M
3300012927\|Ga0137416_10160340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1770	Open in IMG/M
3300012927\|Ga0137416_10170523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1722	Open in IMG/M
3300012927\|Ga0137416_10239415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1477	Open in IMG/M
3300012929\|Ga0137404_11393041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300014157\|Ga0134078_10237271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300015054\|Ga0137420_1025866	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300015241\|Ga0137418_10021986	All Organisms → cellular organisms → Bacteria → Proteobacteria	5902	Open in IMG/M
3300015241\|Ga0137418_10110337	All Organisms → cellular organisms → Bacteria → Acidobacteria	2465	Open in IMG/M
3300015241\|Ga0137418_10397265	Not Available	1125	Open in IMG/M
3300015241\|Ga0137418_10587476	Not Available	876	Open in IMG/M
3300015241\|Ga0137418_10632187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300015245\|Ga0137409_10084262	All Organisms → cellular organisms → Bacteria → Acidobacteria	2964	Open in IMG/M
3300015264\|Ga0137403_11515711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300020199\|Ga0179592_10219682	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300020580\|Ga0210403_10486374	Not Available	1003	Open in IMG/M
3300021088\|Ga0210404_10458693	Not Available	717	Open in IMG/M
3300024330\|Ga0137417_1387602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300026310\|Ga0209239_1156135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300026314\|Ga0209268_1099582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300026329\|Ga0209375_1232695	Not Available	639	Open in IMG/M
3300026551\|Ga0209648_10006230	All Organisms → cellular organisms → Bacteria → Acidobacteria	10268	Open in IMG/M
3300026557\|Ga0179587_10082285	All Organisms → cellular organisms → Bacteria → Acidobacteria	1917	Open in IMG/M
3300026557\|Ga0179587_10337739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300026557\|Ga0179587_11132284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	515	Open in IMG/M
3300027591\|Ga0209733_1113673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300027846\|Ga0209180_10703149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031715\|Ga0307476_10031450	All Organisms → cellular organisms → Bacteria → Acidobacteria	3528	Open in IMG/M
3300031962\|Ga0307479_11697513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031962\|Ga0307479_11721898	Not Available	580	Open in IMG/M
3300032160\|Ga0311301_10442108	All Organisms → cellular organisms → Bacteria → Acidobacteria	1964	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.17%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.17%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.87%
Loam	Environmental → Terrestrial → Soil → Loam	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	80.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	78.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1013266273	3300002245	Forest Soil	PDCGEVTELYDFLIDKITQEPEPGIPSVEVLSISTPDPNPDPNARSNYWHMVWSCREARYRATYRPVK*
JGI25387J43893_10681671	3300002915	Grasslands Soil	LLQQIKMRCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYCQKVWTCRATYRPVK*
Ga0066677_103147701	3300005171	Soil	PNAKPPRLLQQIKMRCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYCQKVWTCRATYRPVK*
Ga0066680_108792571	3300005174	Soil	DCHDVTELYDFLIDRIMQPPDPSIPTVEVLSISPRDPNPDPNARSNYWHMVWSCREARFRATYRPTK*
Ga0066679_110113871	3300005176	Soil	SKIKIKCPDCGEVTELYDFLIDRITQPPDPSIPTVEVLSISPRDLNPDHNARSNYWHKVWACREARYRATYRPVK*
Ga0066685_102021641	3300005180	Soil	MKCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWQKVWSCREARYRATYRPVK*
Ga0070708_1000305654	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTELYDFLIDRIMQPPDPSIPTVEVLSISLRDPNPDPDARLNYWRAIWTRRAARFKSTYGN*
Ga0066681_1000137412	3300005451	Soil	MKCPECGEVTELYDFLIDRITQSPDPSIPTVEVLSISPRDPNPDPHARSNYWHQVWACREARYRLTYRPVK*
Ga0066661_100048524	3300005554	Soil	VTELYDFLIDRITQPPDPSIPTVDVLSISPRDPNPDPNARSNYWHQVWACREARYRATYV
Ga0066700_100701033	3300005559	Soil	YHDPCSKIKIKCPDCNEVTELYDFLIDRITQPPDPSIPTVEVLSISPRDPNPDPNARGNYWHQVWACREARYRATCRP*
Ga0066700_109979651	3300005559	Soil	LPNHYHLCSKIKIKCPDCHDVTELYDFLIDRIMQPPDPSIPTVEVLSISPRDPNPDPNARSNYWHMVWSCREARFRATYRPTK*
Ga0066703_102190252	3300005568	Soil	CPDCHDVTELYDFLIDRIMQPPDPSIPTVEVLSISPRDPNPDPNARSNYWHMVWSCREARFRATYRPTK*
Ga0075028_1007828253	3300006050	Watersheds	EVTELYDFLMHRIMCAPDPDIPTVEVLSISPRDPNPDPNARSNYWQMVWSCREARYRATYRPVK*
Ga0066665_101217232	3300006796	Soil	VTELYDFLIDRITQPPDPSIPTVEVLSISPRDPNPDPNARSNYWHQVWACREARYRATYV
Ga0099794_104433062	3300007265	Vadose Zone Soil	CSKIKMKCPDCQDVTELYDFLIDRIMCAPAPSIPTVDVLSISPRDPNPDPAARSHYWQKVWACREARYRATYRPSK*
Ga0099794_106385771	3300007265	Vadose Zone Soil	MPSHHDCCSKIKMKCPDCGEVTELYDYLITKILQAPEPGIPSIEVLSISPRDPNPDPNARSNYWHKVWACREARYKATYRAVK*
Ga0099829_102772513	3300009038	Vadose Zone Soil	MKCPECNEVTELYDFLIDRIMCAPEPGIPSVEVLSISPRDPNPDPNARSNYWQMVWACREARYRVTYRPVK*
Ga0099830_105296943	3300009088	Vadose Zone Soil	PDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPYARSHYWQKVWSCREARYRATHRLVK*
Ga0099827_101642761	3300009090	Vadose Zone Soil	MKCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWQMVWACREARYRATYRPVK*
Ga0099827_112441511	3300009090	Vadose Zone Soil	EVTELHDFLIDRIMQPPDPSIPTVEVLSISPRDLNPDPNARSSYWQKVWACREARYRAMYRPVK*
Ga0099827_112940831	3300009090	Vadose Zone Soil	KCTNCQDVTEIYDFLIDRIMCAPDPSIPTVDVLSISPRDPNPDPNARSNYWHQVWTCREARYRATYRPMK*
Ga0099792_112647541	3300009143	Vadose Zone Soil	KMKCPDCNEVTELYDFLIDRIMCSPDPSIPTVAILSISPRDPNPDPNARSNYWQMVWACREARYRVTYRPSK*
Ga0137392_105671431	3300011269	Vadose Zone Soil	IKMKCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPYARSHYWQKVWSCREARYRATHRLVK*
Ga0137389_1000813514	3300012096	Vadose Zone Soil	MKCPDCNEVTELYDFLIDRIMCSPDPSIPTVAILSISPRDPNPDPNARSNYWQMVWACREARYRVTYRPVK*
Ga0137389_107819022	3300012096	Vadose Zone Soil	KCPDCGEVTELYEYLIDKILQAPEPGIPSVEILSISPRYPNPDPNARSNYWQKVWSCREARYRTTYRPVK*
Ga0137389_113051341	3300012096	Vadose Zone Soil	LYDFLIDRIMCAPDPSIPTVEVLSISPRDLNPDPNARSNYLHQVWACREARYRATYRPVK
Ga0137388_107024612	3300012189	Vadose Zone Soil	VTELYDFLIDRIMCAPDPSIPTVEVLSISPRDLNPDPNARSNYLHQVWACREARYRATYRPVK*
Ga0137388_119605671	3300012189	Vadose Zone Soil	MKCPDCGEVTELYEYLIDKIMQAPEPGIPSVEVLSISPRDPNPDPYARSHYWQKVWSCREARYRATHRLVK*
Ga0137364_100031463	3300012198	Vadose Zone Soil	MKCPDCGEVTELYDFLIDRIMCAPDPSIPTVEVLSISPLDPNPDPNARSNYWHQVWACREARYRATYRPVK*
Ga0137364_100131817	3300012198	Vadose Zone Soil	MKCPDCGEVTELYDFLIDRIMCAPDPSIPTVEVLSISPRDPNPDPNARSNYWHQVWACRETRYRAKYRPVK*
Ga0137364_100215512	3300012198	Vadose Zone Soil	MKCPDCNEVTELYDFLIDRIMCAPDPSIPTVEVISISPRDPNPDPNARSNYWHQVWACREARYRATYRPVK*
Ga0137364_100430621	3300012198	Vadose Zone Soil	KIKMKCPDCGEVTELYDYLIDKILQAPEPGIPSVEVLAISPRDLNPDPNARSNYWHMVWSCREARYRLTYRPVK*
Ga0137364_102378281	3300012198	Vadose Zone Soil	MWPDPLPSYHDPCSKIRMKCPDCGEVTELYDFLIDKIMQAPEPGIPSIEVLSISPRDLNPDPAARSNYWQMVWACREA
Ga0137364_102746271	3300012198	Vadose Zone Soil	MKCPDCGEVTELYDYHIDKILQAPEPGIPSVEVLSISPRDPKPDPNARSNYWHKVWACREARYRATYRPVK*
Ga0137364_113866183	3300012198	Vadose Zone Soil	GEITELYDYLIDKILQAPEPAIPSVEVLSILPRDPNPDPNARSNYWHKVWACREARYRATYRPVK*
Ga0137383_105263681	3300012199	Vadose Zone Soil	MKCPDCGEVTELYDYLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWQMVWACREARYRATYRPLK*
Ga0137382_104048132	3300012200	Vadose Zone Soil	MKCPDCQELTELYDFLIDKILQAPEPGIPSVEVLSISPRDLNPDPNARSNYWHKVWACREARYRATYRRVK*
Ga0137363_1000090316	3300012202	Vadose Zone Soil	MKCPECGEVTELYDYLITKILQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHKVWACREARYRAMYKPGEIQ*
Ga0137363_100384843	3300012202	Vadose Zone Soil	MKCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDLNPDPNARSNYWHQVWACREARYRATYRPTK*
Ga0137363_100487505	3300012202	Vadose Zone Soil	MKCPDCDEVTELYDFLIDKIMQVPEPGIPSVEVLSISPRDPNPDPNARSNYWHQVWACREARYRVTYRPLK*
Ga0137363_101071303	3300012202	Vadose Zone Soil	MKCPDCGEVTELYDFLIDRIMCAPDPSIPTVQVESISPRDPNPDPNARSNYWQMVWACREARYRTTYRPVK*
Ga0137363_103650571	3300012202	Vadose Zone Soil	VTEIYDFLIDKIMQAPEPGIPSVEVLSISPRDLNPDPNARSNYWHMVWSCREARYRAMHRPVK*
Ga0137363_109062602	3300012202	Vadose Zone Soil	CSKIKMKCPDCNEVTELYDFLIDRITQPPDPSIPTVDCLSISPRDPNPDPNARSNYWQMVWACREARYRTTYRPSK*
Ga0137399_100333297	3300012203	Vadose Zone Soil	MKCPDCNEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWQMVWSCREAR
Ga0137399_100509143	3300012203	Vadose Zone Soil	MKCPDCGEVTVLYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHMVWACREARYRATYRPVK*
Ga0137399_107714331	3300012203	Vadose Zone Soil	CAEVTELYEFLIDKIMQEPEPGIPSVEVLSISPRDPNPDPHARSNYWHKVWACREARYRVTFRPVK*
Ga0137399_109349891	3300012203	Vadose Zone Soil	PCSKVRMKCPDCGEVTELYAYLIDRILQAPEPCIPSIEVLSISPRDPNPDPYARSHYWQKVWVCREARYRLTYRPVK*
Ga0137399_109876171	3300012203	Vadose Zone Soil	VTELYEFLIDKIMQEPEPGIPSVEVLSISPRDPNPDPHARSNYWHMVWSCREARYRATYRPGEIQ*
Ga0137399_110623641	3300012203	Vadose Zone Soil	MKCPDCGEVTELYDYLIDKIMQAPEPGIPSVEVLSISPRDPNPDPHARSNYWHKVWACREARYRATYRPVK*
Ga0137399_116853811	3300012203	Vadose Zone Soil	VIWPELPGHYDLCSKIKIKCPDCGEVTELYEFLIDKIMQEPEPGLPSVEVLSISPRDPDPDPNARSNYWHKVWACREAR
Ga0137399_117838941	3300012203	Vadose Zone Soil	MKCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWRMVWACREARYRATYRPLK*
Ga0137362_100572015	3300012205	Vadose Zone Soil	MKCPDCGEMTELYDFLIDKILQAPEPGIPSVEVLSISPRDPNPDPNARSNYWQMVWACREARY
Ga0137380_116006752	3300012206	Vadose Zone Soil	MKCPDCLEVTEIYDFLIDKIMQAPEPGIPSVEVLSISQRDPNPDPNARSNYWHQVWACREARYRATYRPVK*
Ga0137376_101570182	3300012208	Vadose Zone Soil	MKCPDCGEVTELYDFLIDRITQPPDPSIPTVEVLSISPRDPNPDPNARSNYWHLVWACREARYRVTYRPVK*
Ga0137376_101866213	3300012208	Vadose Zone Soil	MKCPDCGEVSELYDFLIDRIMCTPDPSISTVEVLSISPRDPNPDPNARSNYWHMVWTCREARYRATYRPVK*
Ga0137376_106056083	3300012208	Vadose Zone Soil	YHVCSKIKIKCPDCHDVTELYDFLIDRIMQPADPSIPTVKVLSISPRDPNPDPNARSNYWHQVWSCREARYRATYRPTK*
Ga0137377_100037588	3300012211	Vadose Zone Soil	VCSKIKIKCPDCHDVTELYDFLIDRIMQPADPSIPTVDCLSISPRDPNPDPNARSNYWHQVWACREARYRAMYRPVK*
Ga0137377_102897482	3300012211	Vadose Zone Soil	MKCPDCGEVTELYEFLIDRIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHQVWACREARYRATYRPVK*
Ga0137377_107094763	3300012211	Vadose Zone Soil	MKCPDCGEVAELYDFLIDKILQAPEPGIPSVEVLSISPRDLNPDPNARSNYWHKVWACREARYRATYRP*
Ga0137370_100010865	3300012285	Vadose Zone Soil	MKCPDCQDVTELYDFLIDKILQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHMVWSCREARYKATYRPVK*
Ga0137370_101652411	3300012285	Vadose Zone Soil	MPSHHDCCSKIKMKCPDCGEVTELYDFLIAKILQAPEPGIPSVEVLSISPRDLNPDPNARSNYWHLVWACREARYRVTY
Ga0137370_102221753	3300012285	Vadose Zone Soil	MKCPDCGEVTELYDYLIDKVMLAPEPGKPSVEVLSISPRDPNPDPNARSNYWHLVWACREARYRATYRPVK*
Ga0137370_106954852	3300012285	Vadose Zone Soil	SKIKMKCPDCGVVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPHARSNYWQKVWACREARYRATYRPVK*
Ga0137360_100651071	3300012361	Vadose Zone Soil	PLSSHYDLCSKIKMKCPDCGEVTELYDYLIDKILQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHKVWACREARYRAMYKPGEIQ*
Ga0137360_103473051	3300012361	Vadose Zone Soil	VTELYDFLIDRITCAPDPSIPTVEVLSISPRDPNPDPNARSNYWQMVWACREARYRATHRPVK*
Ga0137360_107834582	3300012361	Vadose Zone Soil	YHLCSKIKMKCPDCGEVTELYDFLIDRIMCAPEPGIPSVEVLSISPRDPNPDPHARSNYWHKVWACREARYRATYRPIK*
Ga0137360_109220853	3300012361	Vadose Zone Soil	DVTELYDFLIDRIMCAPEPSIPTVEVLSISPRDPNPDPNARSNYWHQVWACREARYRATYRPVK*
Ga0137390_103530882	3300012363	Vadose Zone Soil	MKCPDCGEVTELYDYLIDKIMQAPETGIPSVEVLSISPRDPNPDANARSKFWQQVWTRRAARYKAMYGN*
Ga0137390_103992362	3300012363	Vadose Zone Soil	MKCPDCGEVTELYDFLIDRITQPPDPSIPTVAVLSISPRDPNPDPNTRSNYWQMVWSCREARYRTTYWPVK*
Ga0137358_102163721	3300012582	Vadose Zone Soil	LCSKIKMKCPDCNEVTEIYDFLIDRIMCAPDPSIPTVEVLSISPRDPNPDPNARSNYWHQVWACREARYRATYRPVK*
Ga0137358_110089301	3300012582	Vadose Zone Soil	EVTEIYDFLIDKIMQAPEPGIPSVEVLSISPRDLNPDPNARSNYWHMVWSCREARYRAMHRPVK*
Ga0137397_1000143314	3300012685	Vadose Zone Soil	MKCPDCQEETELYDYLIDKILQAPEPGIPSVEVLSISPRDLNPDPNARSNYWQMVWACREARYRTTYRPVK*
Ga0137397_100230155	3300012685	Vadose Zone Soil	VTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWQMVWACREARYRATYRTVK*
Ga0137395_101052783	3300012917	Vadose Zone Soil	MKCPDCGEVTELYDFLIDKIMQVPEPGIPSVEVLSISPRDPNPDPNARSNYWHQVWACREARYRVTYRPLK*
Ga0137395_104613291	3300012917	Vadose Zone Soil	EPYDFLIDRIMQPTDPSIPTVEVLSISPRDPNPDPNARSNYWHQVWSCREARYRATYRPVK*
Ga0137395_107055611	3300012917	Vadose Zone Soil	MKCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDLSPDPNARSNYWQMVWACREARYRATYRPVK*
Ga0137396_100088239	3300012918	Vadose Zone Soil	MECPDCHEVTELYDFLIDRIMQPPDPSLPTVEVLSISPRDPNPDPNARSNYWQMVWACREARYRATHRPVE*
Ga0137396_100362651	3300012918	Vadose Zone Soil	KVKMKCPDCGEVTELYDFLIDRIMCAPDPSIPTVQVESISPRDLNLDPDARSHYWQKVWACREARYRAMYWPVK*
Ga0137396_108025201	3300012918	Vadose Zone Soil	MKCPDCGEVTELYDYLINKILQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHKVWACREARYRLTYRPTK*
Ga0137396_110251261	3300012918	Vadose Zone Soil	MKCPDCGEVTELYEFLIDKIMQEPEPGIPSVEVLSISPRDPNPDPNARSNYWHKVWACREARYRAAYRPSEIQ*
Ga0137394_100009012	3300012922	Vadose Zone Soil	MPSHHDPCSKIKMKCPDCGEVTELYDYLIDKIVRAPEPGIPSVEVLSISPRDANPDPNARSNYWHMVRACREARYRATYRPVK*
Ga0137394_112220091	3300012922	Vadose Zone Soil	EFLIDKIMQEPEPGIPSVEVLSISPRDPNPDPNARSNYWHKVWACREARYRAAYRPSEIQ
Ga0137359_117958931	3300012923	Vadose Zone Soil	IKMKCPDCGEVTEVYDFLIDRIMCAPDLSIPTVEVLSISPRDPNPDPNARSNYWHMVWSCREARYRATYRPGEIQ*
Ga0137419_100146165	3300012925	Vadose Zone Soil	MKCPDCGEVTGLYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHMVWSCREARYRATYRPMK*
Ga0137419_100698081	3300012925	Vadose Zone Soil	PCSKIRMKCPGCGEVTELYDFLIDKIMQAPEPGVPKIEVLSISPRDPNPDPYARSHYWQKVWSCREARYRTTYRPVK*
Ga0137419_103121372	3300012925	Vadose Zone Soil	MPSHDDCCSKIKMKCPDCGEVTELYDYLIDKILQTPEPGVPSVEVLSISPRDPDPDPDARSNRMREIWTRREQKYRATYRPAK*
Ga0137419_103781901	3300012925	Vadose Zone Soil	IKCPDCHDVTELYDFLIDRIMQPPDPSIPTVEVLSISHRDSNPDPNARSNYWHQVWACREARYRATYRPVK*
Ga0137419_108909441	3300012925	Vadose Zone Soil	EVTELYDFLIDRITQPPDPSIPTVDCLSISPRDPNPDPNARSNYWQMVWSCREARYWNGSRCDDLWL*
Ga0137419_111743642	3300012925	Vadose Zone Soil	CSKIKMKCPDCNEVTELYDFLIDRNMCAPDPSIPTVDVLSISPRDLNPDPNARSNYWQMVWTCREARHRATYRPLK*
Ga0137419_115570551	3300012925	Vadose Zone Soil	PDCQEETELYDYLIDKILQAPEPGIPSVEVLSISPRDLNPDPNARSNYWHKVWACREARYRAVYRPVK*
Ga0137416_100117353	3300012927	Vadose Zone Soil	MKCPDCGEVTELYDFLIDKILQAPEPGIPSVEVLSISPRDLNPDPNARSNYWQMVWACREARYRVTFRPTK*
Ga0137416_101603403	3300012927	Vadose Zone Soil	VTELYDFLIDKIMQAPEPSLPSVEVLSISPRDPNPDPNARSNYWQMVWSCREARYRATYRPVK*
Ga0137416_101705231	3300012927	Vadose Zone Soil	PDCGEVTELYDFLIDKIMREPEPGITSVEVLSISPRDPNPDPNARSNYWHKVWSCREARYRATYRPGEIQ*
Ga0137416_102394153	3300012927	Vadose Zone Soil	VTELYDFLIDKIIQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHKVWACREARDRATYRPGEIQ*
Ga0137404_113930412	3300012929	Vadose Zone Soil	MPSHHDPCSKIKMKCPDCGEVTELYAYLIDRILQAPEPCIPSIEVLSISPRDPNPDPYARSHYWQKVWVCREARYRLAYRPVK*
Ga0134078_102372713	3300014157	Grasslands Soil	GEVTELYDFLIDRITQSPDPSIPTVEVLSISPRDPNPDPHARSNYWHQVWACREARYRLTYRPVK*
Ga0137420_10258662	3300015054	Vadose Zone Soil	MPSYHDPCSKIKMKCPDCGEVTELYDFLIDRIMQPPDQSLPTVDCLSISPRDPNPDPNARSNYWQMVWSCREARYRATYRPVK*
Ga0137418_100219865	3300015241	Vadose Zone Soil	MKCPDCNEVTELYDFLIDRNMCAPDPSIPTVDVLSISPRDLNPDPNARSNYWQMVWTCREARHRATYRPLK*
Ga0137418_101103373	3300015241	Vadose Zone Soil	MKCPDCGEVTELYDYLINKILQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHKVWACREARYRLTYRPVK*
Ga0137418_103972651	3300015241	Vadose Zone Soil	YHLCSKIKIKCPDCHDVTELYDFLIDRIMQPPDPSIPTVEVLSISHRDSNPDPNARSNYWHQVWACREARYRATYRPVK*
Ga0137418_105874761	3300015241	Vadose Zone Soil	MKCPDCGEVTELYDYLIDKILQTPEPGVPSVEVLSISPRDPDPDPDARSNRMREIWTRREQKYRATYRPAK*
Ga0137418_106321872	3300015241	Vadose Zone Soil	MPSYHDCCSKIKMKCPDCQEVTELYDFLIDRIMCAPDPSISTVAVLSISPRDPNPDPNARSNYWHQVWACREARYRTTYRPVK*
Ga0137409_100842622	3300015245	Vadose Zone Soil	MKCPDCGEVTELYEFLIDKIMQEPEPGIPSVEVLSISPRDPNPDPHARSNYWHKVWACREARYRVTFRPVK*
Ga0137403_115157111	3300015264	Vadose Zone Soil	MKCPDCGEVTELYAYLIDRILQAPEPCIPSIEVLSISPRDPNPDPYARSHYWQKVWVCREARYRLAYRPVK*
Ga0179592_102196821	3300020199	Vadose Zone Soil	MKCPDCGEVNEVYGFLIDRIKSAPEPGIPSVEVLSISPRDPNPDPDARMNYMRKMWINREARYRATYSQTK
Ga0210403_104863741	3300020580	Soil	KIKMKCPDCGEVTELYAYLIDRILQAPEPCIRSIEVLSISPRDPNPDPYARSHYWQKVWLCQEARYRMTYRPVK
Ga0210404_104586931	3300021088	Soil	MASKIKMKCPDCGEVTELYAYLIDTILQVPEPGMPSVEVLAISPRDPNPDPYARSHYWQKVWLCREARYRATYRPVK
Ga0137417_13876022	3300024330	Vadose Zone Soil	MKCPDCGEVTVLYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYWHMVWACREARYRATYRPVK
Ga0209239_11561351	3300026310	Grasslands Soil	RLLQQIKMRCPDCGEVTELYDFLIDKIMQAPEPGIPSVEVLSISPRDPNPDPNARSNYCQKVWTCRATYRPVK
Ga0209268_10995822	3300026314	Soil	MKCPECGEVTELYDFLIDRITQSPDPSIPTVEVLSISPRDPNPDPHARSNYWHQVWACREARYRLTYRPVK
Ga0209375_12326951	3300026329	Soil	MKCPNCGEVTELYDYLIDKIMQAPEPGIPSVAVLSISPRDPNPDPNARSNYWQMVWSCREARYRAAYRLAK
Ga0209648_100062303	3300026551	Grasslands Soil	MKCPDCNEVTELYDFLIDRIMCAPDASIPTVEVLSISPRDPNPDPAARSHYWQKVWACREARYRVTYRPTK
Ga0179587_100822851	3300026557	Vadose Zone Soil	ELYDFLIDRIMQPPDPSLPTVEVLSISPRDPNPDPNARSNYWQMVWACREARYRATHRPV
Ga0179587_103377393	3300026557	Vadose Zone Soil	PMPSHHDPCSKIKMKCPDCQDVTELYDFLIDRIMCAPDPNIPTVDVLSISPRDPNPDPNARSNYWQMVWSCREARYRATHRPVK
Ga0179587_111322841	3300026557	Vadose Zone Soil	VPTRYHPCSKIKIKCPDCQEVTEIYDFLIDRIMCAPDPSIPTVDVLSISPRDLNPDPNARSNYWQMVWACREARYRATYRPVK
Ga0209733_11136732	3300027591	Forest Soil	PSHHDSCSKIKMKCPDCGEVTELYDYLITKILQAPEPSIPSVEVLAISPRDPNPDPNARSNYWHLVWACREARYRATNRPMK
Ga0209180_107031493	3300027846	Vadose Zone Soil	PTHHHLCSKIKMKCPECNEVTELYDFLIDRIMCAPEPGIPSVEVLSISPRDPNPDPNARSNYWQMVWACREARYRVTYRPVK
Ga0307476_100314503	3300031715	Hardwood Forest Soil	MECPDCGEVTELYAYLIDRILQAPEPGLPKIEVLSISPRDPNPDPYARSHYWQRVWACREARYRTTYRPVK
Ga0307479_116975131	3300031962	Hardwood Forest Soil	TELYDYLIDKILQAPESGIPKIEVLSISPRDPNPDPSARSHYWQKVWSCREARYRATYRTVK
Ga0307479_117218981	3300031962	Hardwood Forest Soil	KCPDCGEVTELYAYLIDRILQAPEPGMPSVEVLSISHRDPNPDPNARSNYWQKVWSCREARYRATYRPVK
Ga0311301_104421084	3300032160	Peatlands Soil	SNVKMKCPDCGELTELYAYLIDRILQAPEPGIPKIKVLSISPRDPNPDPYARSHYWQKVWACREARYRTTHRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072167

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences