NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F072302

Metagenome / Metatranscriptome Family F072302

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072302
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 77 residues
Representative Sequence VTPRSPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ
Number of Associated Samples 91
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 71.07 %
% of genes near scaffold ends (potentially truncated) 19.01 %
% of genes from short scaffolds (< 2000 bps) 84.30 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.380 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(28.926 % of family members)
Environment Ontology (ENVO) Unclassified
(21.488 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.851 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.45%    β-sheet: 13.08%    Coil/Unstructured: 50.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF04672Methyltransf_19 68.60
PF13560HTH_31 2.48
PF10935DUF2637 1.65
PF02467Whib 0.83
PF13604AAA_30 0.83
PF06490FleQ 0.83
PF12728HTH_17 0.83
PF00589Phage_integrase 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG2204DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domainsSignal transduction mechanisms [T] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.38 %
UnclassifiedrootN/A25.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_102317391Not Available1003Open in IMG/M
3300004091|Ga0062387_100040483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2151Open in IMG/M
3300004479|Ga0062595_100190135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1255Open in IMG/M
3300005171|Ga0066677_10757894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii539Open in IMG/M
3300005187|Ga0066675_11457300Not Available500Open in IMG/M
3300005332|Ga0066388_108223891Not Available521Open in IMG/M
3300005336|Ga0070680_101509991All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia582Open in IMG/M
3300005434|Ga0070709_11360978Not Available574Open in IMG/M
3300005435|Ga0070714_100019866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5480Open in IMG/M
3300005435|Ga0070714_100420102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1266Open in IMG/M
3300005436|Ga0070713_100560083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1083Open in IMG/M
3300005437|Ga0070710_11077373Not Available589Open in IMG/M
3300005467|Ga0070706_100028181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae5169Open in IMG/M
3300005467|Ga0070706_100681886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii953Open in IMG/M
3300005468|Ga0070707_100035248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4773Open in IMG/M
3300005471|Ga0070698_101207202Not Available706Open in IMG/M
3300005549|Ga0070704_102257483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia506Open in IMG/M
3300005576|Ga0066708_11009613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia517Open in IMG/M
3300005614|Ga0068856_100988801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia860Open in IMG/M
3300005618|Ga0068864_102523223Not Available520Open in IMG/M
3300006028|Ga0070717_10130391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2161Open in IMG/M
3300006605|Ga0074057_11233340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii634Open in IMG/M
3300006755|Ga0079222_11931163Not Available577Open in IMG/M
3300006797|Ga0066659_11100171Not Available664Open in IMG/M
3300006800|Ga0066660_10972218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia685Open in IMG/M
3300006804|Ga0079221_10024035All Organisms → cellular organisms → Bacteria2512Open in IMG/M
3300006804|Ga0079221_11125694Not Available603Open in IMG/M
3300006806|Ga0079220_10624572Not Available772Open in IMG/M
3300006871|Ga0075434_100738987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1001Open in IMG/M
3300006954|Ga0079219_10621683All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia797Open in IMG/M
3300007076|Ga0075435_101337217Not Available628Open in IMG/M
3300009012|Ga0066710_102314779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia781Open in IMG/M
3300009089|Ga0099828_11479953Not Available599Open in IMG/M
3300009098|Ga0105245_11814335Not Available663Open in IMG/M
3300009137|Ga0066709_101573729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia943Open in IMG/M
3300009143|Ga0099792_10665578Not Available670Open in IMG/M
3300009521|Ga0116222_1079204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1418Open in IMG/M
3300009522|Ga0116218_1262966Not Available774Open in IMG/M
3300009523|Ga0116221_1272308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia732Open in IMG/M
3300009524|Ga0116225_1058496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1839Open in IMG/M
3300009524|Ga0116225_1198976Not Available906Open in IMG/M
3300009545|Ga0105237_11966193Not Available593Open in IMG/M
3300009551|Ga0105238_11185030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia788Open in IMG/M
3300009672|Ga0116215_1084790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1423Open in IMG/M
3300009672|Ga0116215_1157442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1008Open in IMG/M
3300009672|Ga0116215_1168917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia969Open in IMG/M
3300009672|Ga0116215_1209083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia858Open in IMG/M
3300009698|Ga0116216_10390865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia844Open in IMG/M
3300009698|Ga0116216_10445085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia785Open in IMG/M
3300009700|Ga0116217_10346116Not Available949Open in IMG/M
3300010375|Ga0105239_10947791Not Available988Open in IMG/M
3300010379|Ga0136449_100078693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6975Open in IMG/M
3300010379|Ga0136449_100820090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1533Open in IMG/M
3300010379|Ga0136449_101242964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1168Open in IMG/M
3300010379|Ga0136449_101599356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales990Open in IMG/M
3300010379|Ga0136449_101600254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia989Open in IMG/M
3300010379|Ga0136449_101818591Not Available910Open in IMG/M
3300010379|Ga0136449_102292250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia783Open in IMG/M
3300010379|Ga0136449_102458650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia749Open in IMG/M
3300010396|Ga0134126_10450314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1490Open in IMG/M
3300010396|Ga0134126_10694357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1157Open in IMG/M
3300010400|Ga0134122_12060367Not Available610Open in IMG/M
3300012198|Ga0137364_10654540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia792Open in IMG/M
3300012200|Ga0137382_11023913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300012202|Ga0137363_10202967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1591Open in IMG/M
3300012203|Ga0137399_11441193Not Available575Open in IMG/M
3300012206|Ga0137380_10858200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia781Open in IMG/M
3300012209|Ga0137379_10424852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1238Open in IMG/M
3300012354|Ga0137366_11165210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia526Open in IMG/M
3300012515|Ga0157338_1009988All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia950Open in IMG/M
3300012985|Ga0164308_11934550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia550Open in IMG/M
3300013296|Ga0157374_12727071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia522Open in IMG/M
3300014164|Ga0181532_10027756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3981Open in IMG/M
3300014325|Ga0163163_10568336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1197Open in IMG/M
3300015264|Ga0137403_10185844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2021Open in IMG/M
3300015371|Ga0132258_10051366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia9433Open in IMG/M
3300015371|Ga0132258_13967657Not Available1005Open in IMG/M
3300015372|Ga0132256_100042731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4171Open in IMG/M
3300015374|Ga0132255_100161656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3134Open in IMG/M
3300017946|Ga0187879_10160857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1267Open in IMG/M
3300018433|Ga0066667_10188919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1501Open in IMG/M
3300018482|Ga0066669_11562423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia601Open in IMG/M
3300021178|Ga0210408_10285867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1315Open in IMG/M
3300021178|Ga0210408_10610008Not Available864Open in IMG/M
3300021403|Ga0210397_10453332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia966Open in IMG/M
3300021478|Ga0210402_10371586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1327Open in IMG/M
3300021860|Ga0213851_1753451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia743Open in IMG/M
3300025527|Ga0208714_1096868Not Available586Open in IMG/M
3300025898|Ga0207692_10147563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1344Open in IMG/M
3300025898|Ga0207692_10610890Not Available702Open in IMG/M
3300025910|Ga0207684_10022748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5351Open in IMG/M
3300025916|Ga0207663_10907736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia704Open in IMG/M
3300025928|Ga0207700_10082571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2513Open in IMG/M
3300025929|Ga0207664_10327739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1352Open in IMG/M
3300026316|Ga0209155_1241125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi560Open in IMG/M
3300026551|Ga0209648_10169311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1704Open in IMG/M
3300027625|Ga0208044_1133624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia699Open in IMG/M
3300027783|Ga0209448_10077242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1118Open in IMG/M
3300027795|Ga0209139_10298636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia567Open in IMG/M
3300027854|Ga0209517_10366179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales820Open in IMG/M
3300027854|Ga0209517_10430252Not Available734Open in IMG/M
3300027875|Ga0209283_10753376Not Available603Open in IMG/M
3300027905|Ga0209415_10092925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3368Open in IMG/M
3300027905|Ga0209415_10685925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia737Open in IMG/M
3300028828|Ga0307312_10263659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1117Open in IMG/M
3300028885|Ga0307304_10485559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia565Open in IMG/M
3300030494|Ga0310037_10215514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia846Open in IMG/M
3300030707|Ga0310038_10195398All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia970Open in IMG/M
3300031708|Ga0310686_109022690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia837Open in IMG/M
3300032160|Ga0311301_10026719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia15455Open in IMG/M
3300032160|Ga0311301_10061537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8185Open in IMG/M
3300032160|Ga0311301_10533369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1724Open in IMG/M
3300032160|Ga0311301_10580163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1626Open in IMG/M
3300032160|Ga0311301_10633013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1529Open in IMG/M
3300032160|Ga0311301_10754705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1350Open in IMG/M
3300032160|Ga0311301_12136348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales646Open in IMG/M
3300032160|Ga0311301_12959077Not Available512Open in IMG/M
3300032783|Ga0335079_10145292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2664Open in IMG/M
3300032783|Ga0335079_10319467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1690Open in IMG/M
3300032828|Ga0335080_10225582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia2054Open in IMG/M
3300032828|Ga0335080_11642884Not Available632Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil28.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.57%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.09%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.13%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.31%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.31%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.48%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.48%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.48%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.48%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.65%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.83%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.83%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.83%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025527Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10231739113300000956SoilVTPRSSAQVPLVLDGDDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRPETPQ*
Ga0062387_10004048343300004091Bog Forest SoilVRPRSPAQVSPVLDGEDQVARLERFRATFPDVPVLLLAACPRAWVGAQKIEHPTLRGLLDDLEEIFRPDACTSRAGTPQ*
Ga0062595_10019013523300004479SoilVTPRSPAQVSVVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0066677_1075789413300005171SoilVTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPTAWVGGQKIEHPTLRGLLNDLEEIFRPDTHASRAETPR*
Ga0066675_1145730013300005187SoilVTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPTAWVGGQKIEHPTLRGLLNDLEEIFRPDTH
Ga0066388_10822389113300005332Tropical Forest SoilVTPRSAAQVPLVQDGEHQAAQLERFRAAHPDVPVLLLGDCPRAWVGGQKIEHPTLCGLLDDLEEMFRPDTHASRTETPQ*
Ga0070680_10150999123300005336Corn RhizosphereVTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRARTPQ*
Ga0070709_1136097823300005434Corn, Switchgrass And Miscanthus RhizosphereVTPRNPAQVSLVLDGEDQVARLERFRASYPDVPVLLLGTRPRAWIGGQKIEHPTLRGLLDDLEEIFRRDTHASHPGTLQ*
Ga0070714_10001986633300005435Agricultural SoilVTPRSPAQMSVVPDGEDQTARLEQFRTAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRSGARNSCTGAAQ*
Ga0070714_10042010233300005435Agricultural SoilVTPRSPAQVSLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0070713_10056008323300005436Corn, Switchgrass And Miscanthus RhizosphereVIPGSHAALSAAPEEDQVPRLERFRAAHSDVPVLLVGICPKAWVGDQKIEHPRLRGLLDGLEEIFGPDPQARHAGGSQ*
Ga0070710_1107737323300005437Corn, Switchgrass And Miscanthus RhizosphereEDPGALAGDAVTSRNPAQMSLVPDGEDQAARLEQFRAAYPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTGTPQ*
Ga0070706_10002818193300005467Corn, Switchgrass And Miscanthus RhizosphereMTPRSAAQVPLVQDDEDQAARLERFRTTHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETPQ*
Ga0070706_10068188623300005467Corn, Switchgrass And Miscanthus RhizosphereVTPRSAAQVPPVQDGEDQIMRLEQFRVAHPDVPVLLMGACPRAWVGDQKIEHLTLRGLLDELEEIFRPDVRTARTEIPR*
Ga0070707_10003524843300005468Corn, Switchgrass And Miscanthus RhizosphereVTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETPQ*
Ga0070698_10120720233300005471Corn, Switchgrass And Miscanthus RhizosphereVTPRSAAQVPPVQDGEDQIMRLEQFRVAHPDVPVLLMGACPRAWVGDQKIEHLTLRGLLDELEEIFRPDVRTA
Ga0070704_10225748313300005549Corn, Switchgrass And Miscanthus RhizosphereVTPRSPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0066708_1100961313300005576SoilVTPRSAAQVPLVRDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPR*
Ga0068856_10098880123300005614Corn RhizosphereVTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0068864_10252322313300005618Switchgrass RhizosphereVTPRSPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRA
Ga0070717_1013039133300006028Corn, Switchgrass And Miscanthus RhizosphereVTPRSPARMSVVSDGEDQAARLEQFRTAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRPGAHNSCTGRRSDR*
Ga0074057_1123334023300006605SoilVTPRSPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRMRTPQ*
Ga0079222_1193116313300006755Agricultural SoilVTPRSPAQMSVVPDGEDQAARLEQFRTAHPDVPVLLLGDYPRAWVGGQKVEHPTLRGLLDGLEEIFSPGARTSRTRTAQ*
Ga0066659_1110017123300006797SoilVTPRSAAQVSLVLDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEMFRPDTHASRAETPR*
Ga0066660_1097221813300006800SoilAGDAVTPRSPAQVPLVQDGEDQAARLDRFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPR*
Ga0079221_1002403533300006804Agricultural SoilMSVIPDGEDQAARLEQFRTAHPDVPVLLLGDYTRAWVAGEKVEHTTLRGLFDGLEEILRPGTRNSCTGAAQ*
Ga0079221_1112569423300006804Agricultural SoilVTPRNSAQVPLVLDGDDQAARLEWFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDKHAS
Ga0079220_1062457233300006806Agricultural SoilVTPRSPARMSVIPDGEDQAARLEQFRTGHPGVPVLLLGDYPRAWVAGEKVEHTTLRGLLDGLEEIL
Ga0075434_10073898733300006871Populus RhizosphereVTPRSPAQMSLIPDDEDQVARLDQFCAAHPDVPVLLLGDRPRAWVGDQKVEHSTLRDLLDGLEEIFRLGARTSRTRTTQ*
Ga0079219_1062168323300006954Agricultural SoilAGDAVTPRSPAQMSVVPDGEDQAARLEQFRTAHPDVPVLLLGDYPRAWVGGQKVEHPTLRGLLDGLEEIFSPGARTSHTRTAQ*
Ga0075435_10133721723300007076Populus RhizosphereMTGTAKAGTAGKMLTLVLDGEDQTARLERFRATHPDVPVLLMGTRLRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRT
Ga0066710_10231477923300009012Grasslands SoilVTPRSAAQVSLVLDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPR
Ga0099828_1147995323300009089Vadose Zone SoilMTPRSPAPVSLVLDGEDQAARLERFRVTHPDVPVLLLGACPKAWVGDQKIEHRTLRGLLDDLEEILRPDADTSRTGTPQ*
Ga0105245_1181433523300009098Miscanthus RhizosphereVTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0066709_10157372933300009137Grasslands SoilVTPRSAAQVPLVRDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEMFRPDTHASRTETPR*
Ga0099792_1066557813300009143Vadose Zone SoilVCLVLDGEDQVARLERIRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRSDARTSRPGTPQ*
Ga0116222_107920413300009521Peatlands SoilVSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIFRPDAHISRTRTPQ*
Ga0116218_126296613300009522Peatlands SoilMTPRSPAQVSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIVRPDAHISRTRT
Ga0116221_127230823300009523Peatlands SoilSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ*
Ga0116225_105849623300009524Peatlands SoilVIPGSHAGLPAAPDEQDQARRLERFRAAHPGAVIVLLGTCPTAWVGGQRIQRSTLRGLPGGLEEISRPDPRASHAGGSR*
Ga0116225_119897633300009524Peatlands SoilMTPRSPAQVSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIFRPDAHISRTRTPQ*
Ga0105237_1196619313300009545Corn RhizosphereVTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDA
Ga0105238_1118503023300009551Corn RhizosphereVTRRSAAQVPPVQDGEHQAARLERFRATHPDVPVLLTGTCPRAWVGGQKLEHPTLRGLLDDLEEIFRSGARTSRTRTTQ*
Ga0116215_108479023300009672Peatlands SoilVTPRSPAQVSLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTAQ*
Ga0116215_115744223300009672Peatlands SoilVIPGSDAALCAAPDEQDQVPRLERFRAAHPGAVIVLLGTCPTAWVGGQRIQRSTLRGLPGGLEEISRPDPRASHAGGSR*
Ga0116215_116891723300009672Peatlands SoilVSLAPDGEDEVARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ*
Ga0116215_120908313300009672Peatlands SoilPGALAGDAVTPHSAAHVPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKFEHPTLRGLLDDLEEIFRPDVRIARTETLW*
Ga0116216_1039086523300009698Peatlands SoilVIPDSHAALPAAPDEQDQVPRLERFRAAHPGVVILLLGTCPRAWADGQRIERPTLRGLLDGLEEIFRPDAQASHGGGSP*
Ga0116216_1044508523300009698Peatlands SoilVSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIVRQDAHTSRAGTPQ*
Ga0116217_1034611633300009700Peatlands SoilVSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ
Ga0105239_1094779123300010375Corn RhizosphereVTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEMFRPRARTSCTRIPQ*
Ga0136449_10007869343300010379Peatlands SoilVSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ*
Ga0136449_10082009023300010379Peatlands SoilMSLVPDGEDQAARLERFRTAHPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTWTPQ*
Ga0136449_10124296423300010379Peatlands SoilVIPGSHAALSAAPDEQDQARRLERFRAAHPDVVILLLGACPKAWVGDQEIEHPTLRGLLDDLEEIVRPDAHTSRTGTPQ*
Ga0136449_10159935633300010379Peatlands SoilVIPGRHTALSATPVEQDPVRRLERFRAAHPDVVILLLGTCPRAWVDGQRIEHPTLRGLLDRLEEIYHPDPQASHAGGSR*
Ga0136449_10160025423300010379Peatlands SoilVIPGSHAGLPAAPDEQDQARRLERFRAAHPGVVILLLGTCPRAWADGQRIEHPTLRGLEEIVRPDAQASQAGGSQ*
Ga0136449_10181859133300010379Peatlands SoilVIPGSHAALSAAPDEQDQARRLERFRATYPGVPVLLLGARPKAWVGDQKIENPTLRGLLDDLEEIFRPDAHTSRTGTPQ*
Ga0136449_10229225023300010379Peatlands SoilPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKFEHPTLRGLLDDLEEIFRPDVRIARTETLW*
Ga0136449_10245865023300010379Peatlands SoilVSLAPDGEDEVARLERFRAAHPGVPVLLLGTCPKAWVGDQKIENRTLRGLLDDLEEIVRQDAHTSRAGTPQ*
Ga0134126_1045031433300010396Terrestrial SoilLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRARTPQ*
Ga0134126_1069435723300010396Terrestrial SoilLAGDAVTTRSPAQMSLVPDDEDQDVRLDQFRAAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRSGARNSCRGTAQ*
Ga0134122_1206036723300010400Terrestrial SoilLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0137364_1065454023300012198Vadose Zone SoilVTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLLGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRAETPR*
Ga0137382_1102391323300012200Vadose Zone SoilMSLVPDGEDQAARLERFRATHPDVPVLLMGTRPTAWVGGQKIEHPTLRGLLDDLEETFRPDAHASRPGTPQ*
Ga0137363_1020296733300012202Vadose Zone SoilMSLVPDGEDQAARLERFRAAYPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDALTSHTGTPQ*
Ga0137399_1144119313300012203Vadose Zone SoilMSLVPDGEDQAARLERFRAAYPDVPVLLLGTYPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTGTPQ*
Ga0137380_1085820023300012206Vadose Zone SoilVTSRSPAQVPLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVGGQKIEHPTLRGLLDDLEETFRPDAHASRPGTPQ*
Ga0137379_1042485223300012209Vadose Zone SoilVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPTAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRAETPR*
Ga0137366_1116521023300012354Vadose Zone SoilVPLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVGAQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0157338_100998823300012515Arabidopsis RhizosphereVTPRNSAQVPLVQDGEDQAARLDRFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRPETPQ*
Ga0164308_1193455023300012985SoilVTSRSPAQVSLVLDGEDQAARLERFRATHPDVPVLLLGTRPRAWVGGQKIEHPTLRGLLDDLEEMFRPDTHASRTETPQ*
Ga0157374_1272707123300013296Miscanthus RhizosphereEDPGALAGDAVTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSCTRPPQ*
Ga0181532_1002775653300014164BogMTPRSPAQVPLVEDGEDQAARLERFRAVHPGVPVLLLGACPRAWIGDQKIENPTLSGLLDDLEEIFRPDAHASRTGTPQ*
Ga0163163_1056833623300014325Switchgrass RhizosphereMSVVPDGEDQTARLEQFRTAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRSGARNSCTGAAQ*
Ga0137403_1018584443300015264Vadose Zone SoilMSLVPDGEDQAARLERFRTAHPDVPVLLLGTCPRAWVGDQKIEGPTVRGLLDGLEKIFRPDASTSYTGTPQ*
Ga0132258_1005136683300015371Arabidopsis RhizosphereVTPRNSAQVPLVLDGDDQAARLEWFRATHPDVPVLLLGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRPETPQ*
Ga0132258_1396765713300015371Arabidopsis RhizosphereVSLVLDGEDQVARLERFRATHPDVPVLLLGTRPRAWVGGQRLEHPTLRGLLDDLEEILRPDERTSRTRIPQ*
Ga0132256_10004273173300015372Arabidopsis RhizosphereVTPRNSAQVPLVLDGDDQAARLEWFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLFDDLEEIFRPDTHASRPETPQ*
Ga0132255_10016165643300015374Arabidopsis RhizosphereVTPRNSAQVPLVLDGDDQAARLEWFRATHPDVPVLLLGTRPRAWVGGQKIEHPTLRGLFDDLEEIFRPDTHASRPETPQ*
Ga0187879_1016085733300017946PeatlandMTPRSPAQVPLVEDGEDQAARLERFRAVHPGVPVLLLGACPRAWIGDQKIENPTLSGLLDDLEEIFRPDAHASRTGTPQ
Ga0066667_1018891923300018433Grasslands SoilVTPRSAAQVPLVRDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPR
Ga0066669_1156242323300018482Grasslands SoilVIPGSHAALSAAPDEEDQVPRLERFRAAHPDVPVLLLGTCPKAWVGDQKIEHPTLCGLLDGLEETFCPDPQARHAGGSQ
Ga0210408_1028586723300021178SoilVTPRSAAQVPLVQEGEHQAARLERFRATYPDVPVLLIGACPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETPQ
Ga0210408_1061000833300021178SoilVTPRSPAQVPPVQDGADQAARLERFRTTHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPQ
Ga0210397_1045333223300021403SoilVTPRSAAQVLLVQDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETP
Ga0210402_1037158623300021478SoilVTPRSPAQVSLVLDGEDQVSRLERFRATHPEVPVLLLGTRPRAWVGDQKLEHPTLRGLLDDLEEIFRPGARTSRPGTPQ
Ga0213851_175345113300021860WatershedsLVLDGEDEVIRLERFRVTHPDVPVLLLGACPRAWVGDQKIEHPTLRGLLDDLEEIFRPDAHTSGTETPQ
Ga0208714_109686813300025527Arctic Peat SoilMTPRSPAQVSLVGDGEDQAARLERFRAAHPGVPVLLLGACPKAWVDGQKIENRTLRSLLDDLEEFFRPDARISRTGTPK
Ga0207692_1014756323300025898Corn, Switchgrass And Miscanthus RhizosphereVTPRSPAQVSVVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ
Ga0207692_1061089023300025898Corn, Switchgrass And Miscanthus RhizosphereMSLVPDGEDQAARLEQFRAAYPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTGTPQ
Ga0207684_1002274833300025910Corn, Switchgrass And Miscanthus RhizosphereVTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETPQ
Ga0207663_1090773623300025916Corn, Switchgrass And Miscanthus RhizosphereMSLVPDDEDQVARLDQFRAAHPDVPVLLLGDRPTAWVGDQKVEHSTLRDLLDGLEEILRPGARTSCTRTAQ
Ga0207700_1008257143300025928Corn, Switchgrass And Miscanthus RhizosphereVIPGSHAALSAAPEEDQVPRLERFRAAHSDVPVLLVGICPKAWVGDQKIEHPRLRGLLDGLEEIFGPDPQARHAGGSQ
Ga0207664_1032773933300025929Agricultural SoilMSVVPDGEDQTARLEQFRTAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRSGARNSCTGAAQ
Ga0209155_124112513300026316SoilVIPGSHAALSAAPDEEDQVPRLERFRAAHPDVPVLLLGTCPKAWVGDQKIEHPTLCGLLDGLEETFCPAATRSGLSRHGNGCASTS
Ga0209648_1016931133300026551Grasslands SoilMTPRSPAQVPLVPDGEDQAARLERFRATHLDVPVLLLGACPKAWVGDQKIENPTLRGLLDDLEEIFHPDAPTSCTGTPQ
Ga0208044_113362423300027625Peatlands SoilMTPRSPAQVSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIFRPDAHISRTRTPQ
Ga0209448_1007724213300027783Bog Forest SoilVIPGSHAALPAAPGEEEDQVQRLERFRATHPGVIILLLGTCPRARVDGQRIERPTLRGLLDGLEEIVHSD
Ga0209139_1029863623300027795Bog Forest SoilVRPRSPAQVSPVLDGEDQVARLERFRATFPDVPVLLLAACPRAWVGAQKIEHPTLRGLLDDLEEIFRPDACTSRAGTPQ
Ga0209517_1036617933300027854Peatlands SoilVTPRSPAQVSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ
Ga0209517_1043025213300027854Peatlands SoilVIPGSDAALCAAPDEQDQVPRLERFRAAHPGAVIVLLGTCPTAWVGGQRIQRSTLRGLPGGLEEISRPDPR
Ga0209283_1075337623300027875Vadose Zone SoilMTPRSPAPVSLVLDGEDQAARLERFRVTHPDVPVLLLGACPKAWVGDQKIEHRTLRGLLDDLEEILRPDADTSRTGTPQ
Ga0209415_1009292543300027905Peatlands SoilVIPGSDAALCAAPDEQDQVPRLERFRAAHPGAVIVLLGTCPTAWVGGQRIQRSTLRGLPGGLEEISRPDPRASHAGGSR
Ga0209415_1068592523300027905Peatlands SoilPRSPAQVSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ
Ga0307312_1026365933300028828SoilVTPRSAAQVTLVQDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLHGLLDDLEEIFRPDTHASRTETPQ
Ga0307304_1048555913300028885SoilQVSLVLDAEDQVARLERFRATHPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ
Ga0310037_1021551423300030494Peatlands SoilVIPDSHAALPAAPDEQDQVPRLERFRAAHPGVVILLLGTCPRAWADGQRIERPTLRGLLDGLEEIFRPDAQASHGGGSP
Ga0310038_1019539823300030707Peatlands SoilVTPDSAAHVPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKIEHPTLRGLLDDLEEIFRPDVRIARTETLW
Ga0310686_10902269023300031708SoilVIPGSHAALPAAPDEQDQAPRLERFRAAHPDVPVLLLGACPKAWVGDQKIEHPTLRGLLDDLEEIFRPDARASRTETPR
Ga0311301_1002671983300032160Peatlands SoilVTPHSAAHVPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKFEHPTLRGLLDDLEEIFRPDVRIARTETLW
Ga0311301_1006153773300032160Peatlands SoilVTPRSPAQVSLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTAQ
Ga0311301_1053336923300032160Peatlands SoilVTPRSPAQVSLAPDGEDEVARLERFRAAHPGVPVLLLGTCPKAWVGDQKIENRTLRGLLDDLEEIVRQDAHTSRAGTPQ
Ga0311301_1058016333300032160Peatlands SoilVTPRSPAQLSLVTDGEDQAARLERFRAAHPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTWTPQ
Ga0311301_1063301323300032160Peatlands SoilVIPGSHAGLPAAPDEQDQARRLERFRAAHPGVVILLLGTCPRAWADGQRIEHPTLRGLEEIVRPDAQASQAGGSQ
Ga0311301_1075470523300032160Peatlands SoilVIPGSHAALSAAPDEQDQARRLERFRAAHPDVVILLLGACPKAWVGDQEIEHPTLRGLLDDLEEIVRPDAHTSRTGTPQ
Ga0311301_1213634823300032160Peatlands SoilVIPGRHTALSATPVEQDPVRRLERFRAAHPDVVILLLGTCPRAWVDGQRIEHPTLRGLLDRLEEIYHPDPQASHAGGSR
Ga0311301_1295907713300032160Peatlands SoilVTPDSAAHVPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKIEHPTLRGLLDDLEEIFRPGVRIARTETLR
Ga0335079_1014529223300032783SoilVTPRSSAQVPLVLHGDDQAAQLERFRATHPEVPVLLMGTRPRAWVGCQKIEHPTLRGLLDDLEEIFRRDTRVSRPGTPQ
Ga0335079_1031946733300032783SoilMSLVPGDEDQVARLDQFRAAHPDVPVLLLGDRPRAGVGDQKVEHSTLRDLLDGLEEIFRLSARTARTRTTQ
Ga0335080_1022558233300032828SoilVTPRSPAQMSLVPGDEDQVARLDQFRAAHPDVPVLLLGDRPRAGVGDQKVEHSTLRDLLDGLEEIFRLSARTARTRTTQ
Ga0335080_1164288433300032828SoilVTPRSPGQVFLVPDGEDQTARLERFRATHPDVPVLLLGTRPRAWVGDQKFEQPTLRGLLDDLEEIFRPDARTSRTRTSQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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