Metagenome / Metatranscriptome Family F072367

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072367
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	88 residues
Representative Sequence	MKTKVPPFILRVSFLLALTGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGSMAKAWLESRLESLQPKSKTPETRPAARA
Number of Associated Samples	60
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.25 %
% of genes near scaffold ends (potentially truncated)	34.71 %
% of genes from short scaffolds (< 2000 bps)	80.99 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.851 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (34.711 % of family members)
Environment Ontology (ENVO)	Unclassified (52.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (42.149 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.91% β-sheet: 0.00% Coil/Unstructured: 46.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04542	Sigma70_r2	32.23
PF04545	Sigma70_r4	16.53
PF00771	FHIPEP	4.96
PF01618	MotA_ExbB	3.31
PF00460	Flg_bb_rod	1.65
PF13677	MotB_plug	1.65
PF06429	Flg_bbr_C	1.65
PF13144	ChapFlgA	0.83
PF14423	Imm5	0.83
PF05063	MT-A70	0.83
PF10135	Rod-binding	0.83
PF10604	Polyketide_cyc2	0.83
PF02049	FliE	0.83
PF05226	CHASE2	0.83
PF05721	PhyH	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	32.23
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	32.23
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	32.23
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	32.23
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	3.31
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	3.31
COG1749	Flagellar hook protein FlgE	Cell motility [N]	3.31
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	3.31
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	3.31
COG1677	Flagellar hook-basal body complex protein FliE	Cell motility [N]	1.65
COG1815	Flagellar basal body rod protein FlgB	Cell motility [N]	1.65
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	1.65
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.83
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.85 %
Unclassified	root	N/A	42.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.85 %
Unclassified	root	N/A	42.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.85 %
Unclassified	root	N/A	42.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	41.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	41.32 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	9.09 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	6.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	8.26 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	6.61 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	8.26 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	6.61 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	8.26 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	4.96 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	8.26 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	4.96 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.15 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	8.26 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	4.96 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02FZVBN	Not Available	551	Open in IMG/M
3300000036\|IMNBGM34_c015712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	943	Open in IMG/M
3300003320\|rootH2_10108322	All Organisms → cellular organisms → Bacteria	4090	Open in IMG/M
3300003320\|rootH2_10146257	All Organisms → cellular organisms → Bacteria → Proteobacteria	5731	Open in IMG/M
3300004092\|Ga0062389_102139252	Not Available	734	Open in IMG/M
3300005640\|Ga0075035_1494345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	666	Open in IMG/M
3300005650\|Ga0075038_11081269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	802	Open in IMG/M
3300006426\|Ga0075037_1512263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	1076	Open in IMG/M
3300009500\|Ga0116229_10000075	All Organisms → cellular organisms → Bacteria	88415	Open in IMG/M
3300009500\|Ga0116229_10009883	All Organisms → cellular organisms → Bacteria	14446	Open in IMG/M
3300009500\|Ga0116229_10059523	All Organisms → cellular organisms → Bacteria	3696	Open in IMG/M
3300009500\|Ga0116229_10167700	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300009500\|Ga0116229_10199495	Not Available	1723	Open in IMG/M
3300009500\|Ga0116229_10234985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1565	Open in IMG/M
3300009500\|Ga0116229_10477798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1033	Open in IMG/M
3300009500\|Ga0116229_11411015	Not Available	552	Open in IMG/M
3300009697\|Ga0116231_10134203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1468	Open in IMG/M
3300009697\|Ga0116231_10404448	Not Available	750	Open in IMG/M
3300009709\|Ga0116227_10039841	All Organisms → cellular organisms → Bacteria → Proteobacteria	4608	Open in IMG/M
3300009709\|Ga0116227_10945813	Not Available	649	Open in IMG/M
3300009787\|Ga0116226_10107386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2888	Open in IMG/M
3300009787\|Ga0116226_10133607	Not Available	2579	Open in IMG/M
3300014167\|Ga0181528_10567290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	627	Open in IMG/M
3300014168\|Ga0181534_10067036	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300014201\|Ga0181537_11240154	Not Available	503	Open in IMG/M
3300014493\|Ga0182016_10502342	Not Available	701	Open in IMG/M
3300014499\|Ga0182012_10024807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	5264	Open in IMG/M
3300014499\|Ga0182012_10364837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	960	Open in IMG/M
3300014499\|Ga0182012_10494973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	795	Open in IMG/M
3300014501\|Ga0182024_10001738	All Organisms → cellular organisms → Bacteria	55295	Open in IMG/M
3300014501\|Ga0182024_10670827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1285	Open in IMG/M
3300014501\|Ga0182024_12905333	Not Available	507	Open in IMG/M
3300014654\|Ga0181525_10216336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	1046	Open in IMG/M
3300014838\|Ga0182030_10117321	All Organisms → cellular organisms → Bacteria	3564	Open in IMG/M
3300014838\|Ga0182030_10158663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2845	Open in IMG/M
3300015206\|Ga0167644_1008452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	5333	Open in IMG/M
3300027860\|Ga0209611_10003596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	26774	Open in IMG/M
3300027860\|Ga0209611_10138915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	1558	Open in IMG/M
3300027860\|Ga0209611_10141409	Not Available	1539	Open in IMG/M
3300027860\|Ga0209611_10340075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	873	Open in IMG/M
3300028745\|Ga0302267_10003465	All Organisms → cellular organisms → Bacteria	18126	Open in IMG/M
3300028745\|Ga0302267_10439931	Not Available	533	Open in IMG/M
3300028779\|Ga0302266_10267352	Not Available	632	Open in IMG/M
3300028785\|Ga0302201_10203314	Not Available	822	Open in IMG/M
3300028785\|Ga0302201_10211522	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300028788\|Ga0302189_10284399	Not Available	669	Open in IMG/M
3300028866\|Ga0302278_10035306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	3327	Open in IMG/M
3300028866\|Ga0302278_10120901	Not Available	1415	Open in IMG/M
3300028873\|Ga0302197_10112820	Not Available	1354	Open in IMG/M
3300028873\|Ga0302197_10499009	Not Available	531	Open in IMG/M
3300029882\|Ga0311368_10083836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	2772	Open in IMG/M
3300029882\|Ga0311368_10689902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	708	Open in IMG/M
3300029883\|Ga0311327_10378086	Not Available	897	Open in IMG/M
3300029908\|Ga0311341_10347617	Not Available	869	Open in IMG/M
3300029910\|Ga0311369_10431738	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	1136	Open in IMG/M
3300029910\|Ga0311369_10823564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	749	Open in IMG/M
3300029911\|Ga0311361_10016141	All Organisms → cellular organisms → Bacteria	14152	Open in IMG/M
3300029911\|Ga0311361_10462700	Not Available	1288	Open in IMG/M
3300029911\|Ga0311361_10484227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1243	Open in IMG/M
3300029911\|Ga0311361_10523653	Not Available	1169	Open in IMG/M
3300029911\|Ga0311361_10627512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1013	Open in IMG/M
3300029911\|Ga0311361_10726378	Not Available	902	Open in IMG/M
3300029913\|Ga0311362_10413243	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300029913\|Ga0311362_10902059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	709	Open in IMG/M
3300029914\|Ga0311359_11139207	Not Available	515	Open in IMG/M
3300029922\|Ga0311363_10119862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	3512	Open in IMG/M
3300029922\|Ga0311363_10298340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	1812	Open in IMG/M
3300029922\|Ga0311363_11071378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	697	Open in IMG/M
3300029943\|Ga0311340_11475708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300029945\|Ga0311330_11175173	Not Available	557	Open in IMG/M
3300029951\|Ga0311371_10582352	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300029951\|Ga0311371_11536740	Not Available	738	Open in IMG/M
3300029951\|Ga0311371_11676852	Not Available	695	Open in IMG/M
3300029951\|Ga0311371_11994509	Not Available	616	Open in IMG/M
3300029951\|Ga0311371_12027626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	609	Open in IMG/M
3300029952\|Ga0311346_11106013	Not Available	628	Open in IMG/M
3300029952\|Ga0311346_11166296	Not Available	604	Open in IMG/M
3300029953\|Ga0311343_10793582	Not Available	774	Open in IMG/M
3300029954\|Ga0311331_11255206	Not Available	621	Open in IMG/M
3300029954\|Ga0311331_11427509	Not Available	569	Open in IMG/M
3300030020\|Ga0311344_11424708	Not Available	507	Open in IMG/M
3300030503\|Ga0311370_10557574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	1386	Open in IMG/M
3300030503\|Ga0311370_11066848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	892	Open in IMG/M
3300030508\|Ga0302185_10187911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	707	Open in IMG/M
3300030519\|Ga0302193_10043445	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300030519\|Ga0302193_10586586	Not Available	540	Open in IMG/M
3300030520\|Ga0311372_10647900	Not Available	1493	Open in IMG/M
3300030520\|Ga0311372_10761545	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300030520\|Ga0311372_11842848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	719	Open in IMG/M
3300030580\|Ga0311355_11709026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	537	Open in IMG/M
3300030617\|Ga0311356_11231066	Not Available	688	Open in IMG/M
3300030688\|Ga0311345_10367600	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300030688\|Ga0311345_11331190	Not Available	513	Open in IMG/M
3300030906\|Ga0302314_10892882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	874	Open in IMG/M
3300031027\|Ga0302308_10719444	Not Available	564	Open in IMG/M
3300031233\|Ga0302307_10356555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	745	Open in IMG/M
3300031234\|Ga0302325_11785537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	772	Open in IMG/M
3300031234\|Ga0302325_11882376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	745	Open in IMG/M
3300031234\|Ga0302325_12912271	Not Available	557	Open in IMG/M
3300031236\|Ga0302324_101132193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1050	Open in IMG/M
3300031236\|Ga0302324_101273812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	973	Open in IMG/M
3300031236\|Ga0302324_101880045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	757	Open in IMG/M
3300031236\|Ga0302324_101954648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	738	Open in IMG/M
3300031236\|Ga0302324_102583210	Not Available	618	Open in IMG/M
3300031236\|Ga0302324_102595940	Not Available	616	Open in IMG/M
3300031236\|Ga0302324_102630235	Not Available	611	Open in IMG/M
3300031236\|Ga0302324_102695503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	601	Open in IMG/M
3300031236\|Ga0302324_102988071	Not Available	563	Open in IMG/M
3300031258\|Ga0302318_10064002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	1538	Open in IMG/M
3300031258\|Ga0302318_10694433	Not Available	512	Open in IMG/M
3300031524\|Ga0302320_10523141	Not Available	1424	Open in IMG/M
3300031524\|Ga0302320_11695430	Not Available	609	Open in IMG/M
3300031525\|Ga0302326_11836827	Not Available	792	Open in IMG/M
3300031525\|Ga0302326_12490458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	650	Open in IMG/M
3300031788\|Ga0302319_10382629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1583	Open in IMG/M
3300031788\|Ga0302319_10448369	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300031788\|Ga0302319_11821800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	525	Open in IMG/M
3300033887\|Ga0334790_088702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1029	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.64%
Host-Associated	Host-Associated	17.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.51%
Plants	Host-Associated → Plants	16.53%
Aquatic	Environmental → Aquatic	4.13%
Arthropoda	Host-Associated → Arthropoda	0.83%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	66.12%
Peat Moss	Host-Associated → Plants → Peat Moss	14.88%
Soil	Environmental → Terrestrial → Soil	12.40%
Freshwater	Environmental → Aquatic → Freshwater	4.13%
Rhizome	Host-Associated → Plants → Rhizome	1.65%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	66.12%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	14.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.65%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%
Midgut	Host-Associated → Arthropoda → Digestive System → Midgut	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	66.12%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	14.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.13%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Host-Associated → Arthropoda → Digestive System → Midgut → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	34.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	28.10%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	14.88%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.31%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.48%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.48%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%
Passalidae Beetle Gut	Host-Associated → Arthropoda → Digestive System → Midgut → Unclassified → Passalidae Beetle Gut	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000036	Passalidae beetle gut microbial communities from Costa Rica - Gallery material (4MSU+4BSU+3MSU+3BSU)	Host-Associated	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006426	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_10387230	2170459010	Grass Soil	MRTKLPPFILRASLLSALSGGLIGVLISWNNGDELGWSLLRGAVLLLVFGYVTRWWLANLAKAWIESRLESIQTKKQKRGKTVRPHGLDFDKNLSKKRPL
IMNBGM34_0157122	3300000036	Passalidae Beetle Gut	MRTKVPPFILRVSFLAALIGAFLGVLIGFNNGDELGWSLMRGAVMFLAFGTIARWWLGSMAKAWLESRLESLQEKTKLQKPAPSRA*
rootH2_101083223	3300003320	Sugarcane Root And Bulk Soil	MRTKVPSFISRISMLLALTGGFIGVAISYNNGDALGWSLLRGAALFVAFGVVSRWWLGSMAKAWLECRLEALQAKAKTPDNPAAAGVRRAANLTQ*
rootH2_101462573	3300003320	Sugarcane Root And Bulk Soil	MKTKLPPFISRLSFLLALIGAFIGVVIGLGNGDEIGWAFLRGVCLFLAFGIMTRWWLGSMAKAWLESRLESLQTTAAKTQKTNEPRPAMGR*
Ga0062389_1021392521	3300004092	Bog Forest Soil	MKTKVPPFILRVSFLLALTGAFIGVLIGYNNGDDLGWSLLRGAVLFLAFGCMARWWLGTMAKAWLESRLEAIQIKPKTPEVRPARG*
Ga0075035_14943452	3300005640	Permafrost Soil	KVPPFISRISFLTALIGGFVGVLIGWNNGDELGWSLLRGALLFLAFGGVTRWWLANMAKSWLESRLETLQAKNRASEKRSNGRLEDEKSTKKA*
Ga0075038_110812692	3300005650	Permafrost Soil	PFISRIALLTALVGAFIGVLIGWNNGDELGWSLLRGALLFLVFGTVMRWWLATMAKAWLESRLESLQTKSKAMEKRGRLEDEKSTRKA*
Ga0075037_15122631	3300006426	Permafrost Soil	AKVPPFISRIALLTALVGAFIGVLIGWNNGDELGWSLLRGALLFLVFGTVMRWWLATMAKAWLESRLESLQTKSKAMEKRGRLEDEKSTRKA*
Ga0116229_100000753	3300009500	Host-Associated	MKTKVPPFILRVSFLLALSGAFIGVLIGWNNGDELGWSLLRGAILFLVFGSMSRWWLGTMAKAWLESRLESLQAKTKPADNRSPARAGI*
Ga0116229_100098838	3300009500	Host-Associated	MDSAMNTKLPPFISRISFLFALVGAFIGVLIGLSNGDEIGWALMRGVCLFLAFGILTRCWLGSMAKAWLESRLESLQTTAAKTTKTNEPRPAMGR*
Ga0116229_100595231	3300009500	Host-Associated	MRTNVPPFILRVSFLLALAGGFIGVLIGFNNGDELGWSLLRGAVLFLAFGGMARWWLAAMAKAWLESRLESLQVKSKTADNRSPVRAGI*
Ga0116229_101677003	3300009500	Host-Associated	MRNKVPSFISRISLSLALVGGFLGVVISYNNGDELGWSLLRGTALFLVFGLVSRWWLGSMAKMWLESRLEALQAKTKTADAPTLRQGR*
Ga0116229_101994952	3300009500	Host-Associated	MLLALMGGFIGVAISYNNGDAIGWSLLRGAVLFLVFGLVSRWWLGSMAKAWLECRLEAIQAKAKSAETPAATRAGRAAN*
Ga0116229_102349851	3300009500	Host-Associated	MRTNVPPFILRVSFLLALTGGFIGVLIGFNNGDELGWSLLRGAVLFLAFGSMARWWLGTMAKAWLESRLESLQVKNKTADNRSPIRAGI*
Ga0116229_104777981	3300009500	Host-Associated	MRNKVPPFISRLSMLLALMGAFIGVAISYNNGDAIGWSLLRGAVLFLVFGLVSRWWLGSMAKAWLECRLEAIQAKAKSAETPAAVRAGRAAN*
Ga0116229_114110151	3300009500	Host-Associated	MKTKVPPFISRLSFLLALAGAFIGVLIGFNNGDDLGWALLRGAFLFLAFGVMTRWWLGAMAKAWLESRLESFQTPAKTKPAEPRPALGR*
Ga0116231_101342032	3300009697	Host-Associated	MKTKTPHFISQLSFLLALAGAFIGVLIGFNNGDELGWALLRGAFLFLAFGIMSRWWLGNMAKAWLESRLESLQTPVKTKPADHARPALGR*
Ga0116231_104044482	3300009697	Host-Associated	MDSAMNTKLPPFISRISFLFALVGAFIGVLIGLSNGDEIGWALMRGVCLFLAFGILTRCWLGSMAKAWLESRLESLQTSTVKNTKTNEPRPAMGR*
Ga0116227_100398412	3300009709	Host-Associated	MKTKVPPFILRVSFLLALTGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGTMAKAWLESRLESLQPKTKSAETRSAARVGA*
Ga0116227_109458131	3300009709	Host-Associated	MKSKIPPFISRLSFLFALAGAFIGVVIGLSNGDEIGWALLRGACLFLFFGIITRWWLGSMAKAWLESRLESLQASTVKNTKTNEPRPAMGR*
Ga0116226_101073863	3300009787	Host-Associated	MRTKVPPFILRLSFLLALVGAFIGVAISWNNGDEIGWSLLRGAVLFLVFGVVSRWWLATMATAWLESRLETLQAKAKTPEARPGARL*
Ga0116226_101336072	3300009787	Host-Associated	MKSKIPPFISRISFLLALAGAFIGVLIGLSNGDEIGWAFLRGACLFLAFGIMTRWWLGSMAKAWLESRLESLQTNTKTKPEPRPALGR*
Ga0181528_105672901	3300014167	Bog	SSAGTKLRHPLWYHQCLNGNAMRTKVPPFIIRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGCVARWWLGTMAKAWLESRLESLQSKNKTAENRPPARAGL*
Ga0181534_100670362	3300014168	Bog	LQVADFQDYPFAQSLALSLWYHQCLKDDAMKTKVPPFILRVSFLLALTGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGSMAKAWLESRLESLQPKSKTPETRPAARA*
Ga0181537_112401541	3300014201	Bog	MRTNVPPFILRGSFLLALTGGFIGVLIGWNNGDELGWSLLRGAVLFLTFGSIARWWLGTMAKAWLESRLESLQAKTKTADNRSP
Ga0182016_105023421	3300014493	Bog	MRTKVPPFIVRISFLLALVGGFIGVAISWNNGDAIGWSLLRGAILFGVFGAVSRWWLGSMAKAWLESRLEALHQ
Ga0182012_100248072	3300014499	Bog	MKTKVPPFILRVSFLLALTGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGSMAKAWLESRLESLQPKSKTPETRPAARA*
Ga0182012_103648372	3300014499	Bog	VRLSFLLALTGAFIGVLIGWNNGDELGWSLLRGAFLFLAFGIMGRWWLRKMAKAWLESRLESLQPKPKTTEARPIR*
Ga0182012_104949732	3300014499	Bog	MRSKVPPFILRVSFLLALIGGFIGVAISYNNGDAIGWSLLRGAILFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAATRAGRSVNQ*
Ga0182024_1000173847	3300014501	Permafrost	MRNKVPPFIVRISFLLALIGGFIGVAISWNNGDAIGWSLVRGAILFGVFGVVSRWWLGSMAKAWLESRLEALHQAKVKAAEVRPTGRA*
Ga0182024_106708272	3300014501	Permafrost	MKTKVPPFILRVSFLLALTGAFIGVLIGWNNGDDLGWSLLRGAILFLAFGTIARWWLGTMAKAWLESRLESLQVKTKTVDNRSPVRAGL*
Ga0182024_129053331	3300014501	Permafrost	MRSKVPPFILRVSFLLALIGGFIGVAISYNNGDAIGWSLLRGATLFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPARAGRTN*
Ga0181525_102163361	3300014654	Bog	LALTGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGSMAKAWLESRLESLQPKSKTPETRPAARA*
Ga0182030_101173215	3300014838	Bog	MKTKVPPFIVRVSFLLALTGAFIGVLIGWNNGDELGWSLLRGAILFLAFGTIARWWLGTMAKAWLESRLETLHAKTKTVDNRSPVRAGL*
Ga0182030_101586634	3300014838	Bog	MRTKVPPFILRVSFLLALSGAFIGVLIGWNNGDELGWSLLRGAILFLVFGSMSRWWLGTMAKAWLESRLESLQAKTKPADNRTPARAGI*
Ga0167644_10084521	3300015206	Glacier Forefield Soil	MKTKVPPFILRVSFLLALTGAFIGVLIGWNNGDELGWSLLRGAILFLTFGTIARWWLGTMAKAWLESRLESLQAKTKTVDNRSPLRAGL*
Ga0209530_11454091	3300027692	Forest Soil	MKTKIPAFIIRLSFLLALTGAFIGVLIGWNNGDALGWSLLRGAFLFLAFGIMSRWWLSNMAKAWLESRLES
Ga0209611_100035964	3300027860	Host-Associated	MNTKLPPFISRISFLFALVGAFIGVLIGLSNGDEIGWALMRGVCLFLAFGILTRCWLGSMAKAWLESRLESLQTTAAKTTKTNEPRPAMGR
Ga0209611_101389153	3300027860	Host-Associated	MRTNVPPFILRVSFLLALAGGFIGVLIGFNNGDELGWSLLRGAVLFLAFGGMARWWLAAMAKAWLESRLESLQVKSKTADNRSPVRAGI
Ga0209611_101414093	3300027860	Host-Associated	MKTKVPPFILRVSFLLALSGAFIGVLIGWNNGDELGWSLLRGAILFLVFGSMSRWWLGTMAKAWLESRLESLQAKTKPADNRSPARAGI
Ga0209611_103400752	3300027860	Host-Associated	MRNKVPSFISRISLSLALVGGFLGVVISYNNGDELGWSLLRGTALFLVFGLVSRWWLGSMAKMWLESRLEALQAKTKTADAPTLRQGR
Ga0302267_1000346518	3300028745	Bog	MNTKLPPFISRLSFLFALVGAFIGVLIGLGNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQTTAVKTTKTNEPRPAMGR
Ga0302267_104399311	3300028745	Bog	MRTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGVVARWWLGTMAKAWLESRLESLQSKNKTAENRPPARAGL
Ga0302266_102673522	3300028779	Bog	MRTRVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGGIARWWLGSMARAWLESRLESLQTKNKTAENRPPARAGL
Ga0302201_102033142	3300028785	Bog	MRTKVPPFILRLSFLLALTGAFIGVLIGFNNGDDLGWSLLRGAILFLAFGVIGRWWLGTMAKAWLESRLESLQSKNKTADV
Ga0302201_102115222	3300028785	Bog	MNTKLPPFISRLSFLFALVGAFIGVLIGLGNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQTTAVKT
Ga0302189_102843991	3300028788	Bog	MKTNVPPFILRVSFLLALSGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGSMAKAWLESRIESLQPKSKTPETRPAARA
Ga0302278_100353064	3300028866	Bog	MRTKVPPFILRLSFLLALTGAFIGVLIGFNNGDDLGWSLLRGAILFLAFGVIGRWWLGTMAKAWLESRLESLQSKNKTADVRPAMGRTIN
Ga0302278_101209011	3300028866	Bog	MKTKVPSFVTRVSFLLALTGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFISRWWLGSMAKAWLESRVESLTSPTKAVETRPTARA
Ga0302197_101128202	3300028873	Bog	MRTKVPPFILRLSFLLALTGAFIGVLIGFNNGDDLGWSLLRGAILFLAFGVIGRWWLGTMAKAWLESRLESLQSK
Ga0302197_104990091	3300028873	Bog	MKTKVPSFITRVSFLLALTGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFISRWWLGSMAKAWLESRVESLTSPTKAVETRPTARA
Ga0311368_100838361	3300029882	Palsa	MKPKVPPFILRISFLLALTGAFIGVLIGWNNGDEIGWALLRGSFLFLAFGLMSRWWLGTMAKAWLESRLEAIQTKAKPADVRPALGRSTN
Ga0311368_106899022	3300029882	Palsa	MRSKVPPFILRVSFLLALVGGFIGVAISYNNGDAIGWSLLRGAILFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAAVRTGRS
Ga0311327_103780862	3300029883	Bog	MRTKVPPFILRVSFLLALTGAFIGVLIGWNNGDALGWSLLRGAVLFLTFGSIARWWLGAMAKAWLESRLESLQAKTKTVENRSPARVGL
Ga0311341_103476172	3300029908	Bog	MKTNVPPFILRVSFLLALSGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGSMAKAWLESRIESLQPKSKTPETRP
Ga0311369_104317383	3300029910	Palsa	RVSFLLALAGGFIGVLIGWNNGDELGWSLLRGAILFLAFGSIAKWWLGTMAKAWLESRLESLQTTVVKTKPADGRTPARA
Ga0311369_108235642	3300029910	Palsa	MNTKLPPFISRLSFLIGLVGAFVGVVIGLSNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQTTAAKSTKTNEPRPAMGR
Ga0311361_1001614118	3300029911	Bog	MRSKVPPFILRVSFLLALIGGFIGVAISYNNGDAIGWSLLRGAILFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAATRAGRSVNQ
Ga0311361_104627001	3300029911	Bog	MKTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGTIARWWLGTMAKAWLESRLESLQPKTKTVDNRSPARVGL
Ga0311361_104842272	3300029911	Bog	MRTKVPPFILRVSFLLALTGAFIGVLIGWNNGDALGWSLLRGAVLFLTFGSIARWWLGAMAKAWLESRLESLQAKTKTVENRSPARAGL
Ga0311361_105236532	3300029911	Bog	DSQGHPRGPKFVTLLWYRQCLKDNAMRTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGTMAKAWLESRLESLQAKTKPTDNRSPARVGL
Ga0311361_106275121	3300029911	Bog	MRTKVPPFILRVSFLLALTGGFIGVLIGFNNGDELGWSLLRGAVLFLAFGGMARWWLGTMAKAWLESRLESLQVKNKTADSRTPARA
Ga0311361_107263781	3300029911	Bog	MRTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGTIARWWLGTMAKAWLESRLESLHTKPTKPTDSRTPARA
Ga0311362_104132431	3300029913	Bog	VPSFITRVSFLLALTGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFISRWWLGSMAKAWLESRVESLTSPTKAVETRPTARA
Ga0311362_109020591	3300029913	Bog	LKTGWPLRCYLIGAMRTKVPPFIVRISFLLALVGGFIGVAISWNNGDAIGWSLLRGVILFGVFGAVSRWWLGSMAKAWLESRLEALHQAKTKTAEVRPAGRA
Ga0311359_102146291	3300029914	Bog	IGVLIGWNNGDELGWSLLRGAILFLAFGCVARWWLGTMAKAWLESRLESLQSKNKTAENRPPARAGL
Ga0311359_111392071	3300029914	Bog	MKTKVPPFILRVSFLLALTGGFIGVLIGFNNGDELGWSLLRGAVLFLAFGSMARWWLGTMAKAWLESRLESLQVKNKTVDNRSPARAGL
Ga0311363_101198623	3300029922	Fen	MRTKVPPFILRLSFLLALTGAFIGVLIGFNNGDDLGWSLLRGAILFLAFGVIGRWWLGTMAKAWLESRLESLQSKNKTADVR
Ga0311363_102983401	3300029922	Fen	LSSEAVHLWYHHCLKRDAMRTKVPPFILRVSFLLALTGAFIGVLIGWNNGDALGWSLLRGAVLFLTFGSIARWWLGAMAKAWLESRLESLQAKTKTVENRSPARVGL
Ga0311363_110713782	3300029922	Fen	MRNKVPPFISRLSMLLALMGAFIGVAISYNNGDAIGWSLLRGAVLFLVFGLVSRWWLGSMAKAWLECRLEAIQAKAKSAETPAAVRAGRAAN
Ga0311340_114757082	3300029943	Palsa	KSNLPPFISRLSFLLALTGAFIGVVIGLSNGDEIGWAFLRGACLFLAFGIMSRWWLGTMAKAWLESRLESLQTPTKTKTNPESRPALGR
Ga0311330_111751731	3300029945	Bog	MRNKVPPFISRLSMLLALMGAFIGVAISYNNGDAICWSLLRGAVLFLVFGLVSRWWLGSMAKAWLECRLEAIQAKAKSAETPAAVRAGRAAN
Ga0311371_105823521	3300029951	Palsa	MKTNIPPFILRVSFLLALAGGFIGVLIGWNNGDELGWSLLRGAILFLAFGSIAKWWLGTMAKAWLESRLESLQTTVVKTKPADGRTPARA
Ga0311371_115367401	3300029951	Palsa	MKTNIPPFIIRVSFLLALAGGFIGVLIGWNNGDELGWSLLRGAILFLAFGSIAKWWLGTMAKAWLESRLESLQATVVKTKPADGRTPARA
Ga0311371_116768522	3300029951	Palsa	MKSNLPPFISRLSFLLALTGAFIGVVIGLSNGDEIGWAFLRGACLFLAFGIMSRWWLGTMAKAWLESRLESLQTPTKTKTNPESRPALGR
Ga0311371_119945091	3300029951	Palsa	MKTKVPPFISRLSFLLALTGAFIGVVIGLSNGDEIGWAFLRGTCLFLAFGIMTRWWLGNVAKAWLESRLESLQPTTAKTNKPNEPRPAMGR
Ga0311371_120276262	3300029951	Palsa	AMKTKVPPFILRVSFLLALTGGFIGVLIGFNNGDELGWSLLRGAVLFLAFGCMARWWLGTMAKAWLESRLESLQVKTKTTDNRSPVRAGI
Ga0311346_1000441928	3300029952	Bog	VLIGWNNGDELGWSLLRGAILFLAFGVVARWWLGTMAKAWLESRLESLQSKNKTAENRPPARAGL
Ga0311346_111060131	3300029952	Bog	MRNKVPPFISRLSLLLALMGAFIGVAISYNNGDAIGWSLLRGAVLFLVFGLVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAATRAGRSVNQ
Ga0311346_111662961	3300029952	Bog	MKTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGTIARWWLGTMAKAWLESRLESLQPKTKT
Ga0311343_107935821	3300029953	Bog	MKTKVPPFIVRVSFLLALTGGFIGVLIGWNNGDDLGWSLLRGAILFLAFGTIARWWLGTMAKAWLESRLESLQPKPKTVDNRSPARVGL
Ga0311331_112552062	3300029954	Bog	MRTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGVVARWWLGTMAKAWLESRLESLQSKNKTAEN
Ga0311331_114275092	3300029954	Bog	DDAMKTKVPSFISRVSFLIALTGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFIARWWLGSMAKAWLESRLETIATKTKTVDTRPAATRA
Ga0311344_114247082	3300030020	Bog	MRTKVPPFILRVSFLLALTGAFIGVLIGWNNGDALGWSLLRGAVLFLTFGSIARWWLGAMAKAWLESRLESLQA
Ga0311370_105575742	3300030503	Palsa	MKTKVPPFILRVSFLLALTGAFIGVLIGWDNGDELGWSLLRGAILFLAFGSIARWWLGTMAKAWLESRLESLQTKTKNPDNRSAARVGV
Ga0311370_110668481	3300030503	Palsa	MDSAMKTKLPPFISRISFLFALVGAFIGVVIGLSNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQTTAAKSTKTNEPRPAMGR
Ga0302185_101879112	3300030508	Bog	ILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGVVARWWLGTMAKAWLESRLESLQSKNKTAENRPPARAGL
Ga0302193_100434451	3300030519	Bog	MNTKLPPFISRLSFLFALVGAFIGVLIGLGNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQTTAVKTTKTNEPRPAM
Ga0302193_105865861	3300030519	Bog	MRSKVPPFILRVSFLLALIGGFIGVAISYNNGDAIGWSLLRGAILFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETP
Ga0311372_106479002	3300030520	Palsa	MRYKVPPFILRVSFLLALVGGFIGVAISYNNGDAIGWSLLRGAILFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAAVRTGRS
Ga0311372_107615452	3300030520	Palsa	MNSAMKTKLPPFISRISFLFALVGAFIGVVIGLSNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQTTAAKSTKTNEPRPAMGR
Ga0311372_118428481	3300030520	Palsa	HCLKVDAMNTKVPPFILRVSLLIAMTGGLIGVFIGWNNGDELGWSLLRGAILFMSFGCVSRWWLGSMAKAWLESRLETLQAKAKPVETRPVPAARA
Ga0311355_117090261	3300030580	Palsa	SFLLALIGGFIGVAISYNNGDAIGWSLLRGAVLFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAASRTGRS
Ga0311356_112310661	3300030617	Palsa	MRTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGSIARWWLGTMAKAWLESRLESLHTKPTKPTDSRTPARA
Ga0311345_103676003	3300030688	Bog	KEDAMKTNVPPFILRVSFLLALSGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGSMAKAWLESRIESLQPKSKTPETRPAARA
Ga0311345_113311901	3300030688	Bog	YQQCLKDDAMKTKVPSFITRVSFLLALTGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFISRWWLGSMAKAWLESRVESLTSPTKAVETRPTARA
Ga0302314_108928822	3300030906	Palsa	LMDSAMKTKLPPFISRISFLFALVGAFIGVVIGLSNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQTTAAKSTKTNEPRPAMGR
Ga0302308_107194442	3300031027	Palsa	MKTKLPPFISRISFLFALVGAFIGVVIGLSNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQTTAAKSTKTNEPRPAMGR
Ga0302307_103565552	3300031233	Palsa	RDDAMKTKVPPFILRVSFLLALTGAFIGVLIGWDNGDELGWSLLRGAILFLAFGSIARWWLGTMAKAWLESRLESLQTKTKNPDNRSAARVGV
Ga0302325_117855372	3300031234	Palsa	MKTKLPPFISRLSFLFALIGAFIGVLIGLSNGDEFGWALMRGVCLFLAFGILTRWWLGSMAKAWLESRLESLQSNTKTKPTNEPRPAMGR
Ga0302325_118823762	3300031234	Palsa	MRTKVPPFILRVSFLLALTGAFIGVLIGWNNGDELGWSLLRGAVLFLAFGSMARWWLGTMAKAWLECRLESIQTKTKTTETVRPRG
Ga0302325_129122711	3300031234	Palsa	MKTRVPSFISRLSFLLALAGAFVGVLIGFNNGDELGWALLRGAFLFIAFGIITRWWLGNMAKAWLESRLESLQTPNPKTKTADVRPALGR
Ga0302324_1011321931	3300031236	Palsa	MRNKVPPFILRVSFLLALVGGFIGVAISYNNGDAIGWSLLRGAILFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAAVRTGRS
Ga0302324_1012738121	3300031236	Palsa	MKTKVPSFISRVSFLLALAGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFIARWWLGSMAKAWLESRIESLATK
Ga0302324_1018800451	3300031236	Palsa	SFLLALTGGFIGVLIGWNNGDELGWSLLRGAVLFLTFGSIARWWLGTMAKAWLESRLESLQAKTKTADNRSPARVGL
Ga0302324_1019546481	3300031236	Palsa	MKTKVPHFISRLSFLLALAGAFIGVLIGFNNGDDLGWALLRGAFLFLAFGIIARWWLGNMAKAWLESRLESLQTPVKTKPADNPRPAMGR
Ga0302324_1025832101	3300031236	Palsa	MRTNVPPFILRVSFLLALTGAFIGVLIGWNNGDDLGWSLLRGAILFLAFGTIARWWLGTMAKAWLESRLESLQAKTKPVDNRSPVRAGV
Ga0302324_1025959401	3300031236	Palsa	MKTKIPPFISRLSFLLALAGAFIGVLIGLSNGDEIGWALLRGTCLFLAFGIMSRWWLGSMAKAWLESRLESLQSTAKNTKPNEPRPAMGR
Ga0302324_1026302351	3300031236	Palsa	MKTKIPPFISRLSFLLALAGAFIGVVIGLSNGDEIGWALLRGACLFLAFGIMTRWWLGSMAKAWLESRLESLQTNTKPKTTPETRPAMGR
Ga0302324_1026955031	3300031236	Palsa	MKTKVPPFISRLSFLLALTGAFIGVLIGFNNGDDLGWALLRGAFLFLAFGIMSRWWLGNMAKAWLESRLESLQSPAKTKPADTRPALGR
Ga0302324_1029880711	3300031236	Palsa	MRSKVPPFILRVSFLLALIGGFIGVAISYNNGDAIGWSLLRGAILFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAATR
Ga0302318_100640023	3300031258	Bog	PPFILRLSFLLALTGAFIGVLIGFNNGDDLGWSLLRGAILFLAFGVIGRWWLGTMAKAWLESRLESLQSKNKTADVRPAMGRTIN
Ga0302318_106944331	3300031258	Bog	KTKVPHFISRLSFLLALTGAFIGVLIGFNNGDDLGWALLRGAFLFLAFGIMTRWWLGNMAKAWLESRLESLQSPTKTKPTDPRPAMGR
Ga0302320_105231411	3300031524	Bog	MRTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAVLFLAFGSIARWWLGTMAKAWLESRLESLQAKTKPTDNRSPARVGL
Ga0302320_116954302	3300031524	Bog	MKTKVPPFILRVSFLLALTGGFIGVLIGWNNGDELGWSLLRGAILFLAFGTIARWWLGTMAKAWLESRLESLQPKTKTVDNRSPAR
Ga0302326_118368272	3300031525	Palsa	MKSKIPHFISRLSFLLALAGAFIGVLIGFNNGDELGWALLRGAFLFLAFGVIARWWLGNMAKAWLESRLESLQTPVKTKPADHPRPALGR
Ga0302326_124904582	3300031525	Palsa	AMRSKVPPFILRISSLLALIGGFIGVAISYNNGDAFGWSLLRGAILFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPAASRTGRS
Ga0302319_103826291	3300031788	Bog	MKTKVPSFISRVSFLFALLGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFIARWWLGSMAKAWLESRLESMATKTKPVDTRPAATRA
Ga0302319_104483691	3300031788	Bog	GRWYQQCLKDDAMKTKVPSFITRVSFLLALTGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFISRWWLGSMAKAWLESRVESLTSPTKAVETRPTARA
Ga0302319_118218002	3300031788	Bog	RVSFLLALAGAFIGVLIGWNNGDEMGWALLRGAVLFLAFGFISRWWLGSMAKAWLESRVESLTSPVKAVETRPTARA
Ga0334790_088702_386_655	3300033887	Soil	MRSKVPPFILRVSFLLALIGGFIGVAISYNNGDAIGWSLLRGATLFAVFGIVSRWWLGSMAKAWLECRLEAIQAKAKTPETPARAGRTN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072367

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences