NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F072461

Metagenome / Metatranscriptome Family F072461

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072461
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 74 residues
Representative Sequence VSEERTLLTGTALNVAGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIG
Number of Associated Samples 104
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.39 %
% of genes near scaffold ends (potentially truncated) 80.99 %
% of genes from short scaffolds (< 2000 bps) 76.03 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (61.983 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.703 % of family members)
Environment Ontology (ENVO) Unclassified
(43.802 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.719 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 59.41%    β-sheet: 0.00%    Coil/Unstructured: 40.59%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF01663Phosphodiest 28.10
PF01625PMSR 17.36
PF01943Polysacc_synt 3.31
PF01966HD 1.65
PF01522Polysacc_deac_1 0.83
PF02784Orn_Arg_deC_N 0.83
PF01370Epimerase 0.83
PF01118Semialdhyde_dh 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0225Peptide methionine sulfoxide reductase MsrAPosttranslational modification, protein turnover, chaperones [O] 17.36
COG0019Diaminopimelate decarboxylaseAmino acid transport and metabolism [E] 0.83
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.83
COG1166Arginine decarboxylase (spermidine biosynthesis)Amino acid transport and metabolism [E] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.64 %
UnclassifiedrootN/A36.36 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_108961297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1041Open in IMG/M
3300003373|JGI25407J50210_10070593All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria872Open in IMG/M
3300003373|JGI25407J50210_10171919All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300004081|Ga0063454_101199989Not Available628Open in IMG/M
3300004114|Ga0062593_100478472All Organisms → cellular organisms → Bacteria → Proteobacteria1146Open in IMG/M
3300004153|Ga0063455_100363320All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria832Open in IMG/M
3300004156|Ga0062589_101948210All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300004157|Ga0062590_100083066All Organisms → cellular organisms → Bacteria → Proteobacteria1951Open in IMG/M
3300004479|Ga0062595_101846554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium576Open in IMG/M
3300005093|Ga0062594_100928815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria826Open in IMG/M
3300005165|Ga0066869_10001879All Organisms → cellular organisms → Bacteria2370Open in IMG/M
3300005337|Ga0070682_100408526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1029Open in IMG/M
3300005338|Ga0068868_100896033All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300005340|Ga0070689_101082812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium716Open in IMG/M
3300005343|Ga0070687_100389493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia911Open in IMG/M
3300005367|Ga0070667_101558275Not Available621Open in IMG/M
3300005459|Ga0068867_100281597All Organisms → cellular organisms → Bacteria1364Open in IMG/M
3300005526|Ga0073909_10125812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1043Open in IMG/M
3300005545|Ga0070695_100485391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium953Open in IMG/M
3300005546|Ga0070696_100931613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium722Open in IMG/M
3300005578|Ga0068854_100213967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1522Open in IMG/M
3300005615|Ga0070702_100717011All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300005719|Ga0068861_100456950All Organisms → cellular organisms → Bacteria1146Open in IMG/M
3300006237|Ga0097621_101213333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium711Open in IMG/M
3300006358|Ga0068871_101920346Not Available563Open in IMG/M
3300006755|Ga0079222_12634594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300006854|Ga0075425_102639931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300006881|Ga0068865_100033459All Organisms → cellular organisms → Bacteria3441Open in IMG/M
3300006881|Ga0068865_101167123Not Available680Open in IMG/M
3300006953|Ga0074063_10004501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1009Open in IMG/M
3300009174|Ga0105241_10020432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4892Open in IMG/M
3300009174|Ga0105241_11558266Not Available638Open in IMG/M
3300009177|Ga0105248_10921941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium986Open in IMG/M
3300009551|Ga0105238_10632885Not Available1079Open in IMG/M
3300009815|Ga0105070_1065204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium688Open in IMG/M
3300010038|Ga0126315_10726239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium650Open in IMG/M
3300010041|Ga0126312_11028190All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300012212|Ga0150985_117566278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1732Open in IMG/M
3300012891|Ga0157305_10227666All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium549Open in IMG/M
3300012988|Ga0164306_11353296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300013306|Ga0163162_11337088Not Available815Open in IMG/M
3300013306|Ga0163162_12767266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium565Open in IMG/M
3300013307|Ga0157372_12360621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300014311|Ga0075322_1042646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium977Open in IMG/M
3300014325|Ga0163163_12026012All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium635Open in IMG/M
3300014968|Ga0157379_11360322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium687Open in IMG/M
3300014969|Ga0157376_11484788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium711Open in IMG/M
3300015371|Ga0132258_11392098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1772Open in IMG/M
3300018076|Ga0184609_10046665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1838Open in IMG/M
3300018469|Ga0190270_10002765All Organisms → cellular organisms → Bacteria → Proteobacteria8606Open in IMG/M
3300021073|Ga0210378_10177049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300022467|Ga0224712_10117387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1148Open in IMG/M
3300022898|Ga0247745_1100246Not Available500Open in IMG/M
3300024055|Ga0247794_10163618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300025792|Ga0210143_1095620All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium546Open in IMG/M
3300025901|Ga0207688_10104769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1637Open in IMG/M
3300025901|Ga0207688_10468703All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300025916|Ga0207663_11194493All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300025916|Ga0207663_11276884Not Available591Open in IMG/M
3300025924|Ga0207694_10442063Not Available1085Open in IMG/M
3300025927|Ga0207687_10165395Not Available1701Open in IMG/M
3300025927|Ga0207687_10253820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1399Open in IMG/M
3300025927|Ga0207687_10556989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria962Open in IMG/M
3300025932|Ga0207690_10591989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium905Open in IMG/M
3300025933|Ga0207706_10828596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium785Open in IMG/M
3300025937|Ga0207669_11244446Not Available631Open in IMG/M
3300025949|Ga0207667_11326004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium695Open in IMG/M
3300025981|Ga0207640_10174153All Organisms → cellular organisms → Bacteria1607Open in IMG/M
3300026023|Ga0207677_10480877Not Available1070Open in IMG/M
3300026078|Ga0207702_11004733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium827Open in IMG/M
3300026116|Ga0207674_11886951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M
3300026142|Ga0207698_10119052All Organisms → cellular organisms → Bacteria2231Open in IMG/M
3300028380|Ga0268265_11806053Not Available618Open in IMG/M
3300028597|Ga0247820_11243646Not Available538Open in IMG/M
3300028711|Ga0307293_10277244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium532Open in IMG/M
3300028717|Ga0307298_10169458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium638Open in IMG/M
3300028719|Ga0307301_10044194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1363Open in IMG/M
3300028755|Ga0307316_10289270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300028784|Ga0307282_10382089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium682Open in IMG/M
3300028784|Ga0307282_10425637Not Available644Open in IMG/M
3300028791|Ga0307290_10064548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1326Open in IMG/M
3300028791|Ga0307290_10293656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium595Open in IMG/M
3300028793|Ga0307299_10099920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1084Open in IMG/M
3300028809|Ga0247824_10329491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria866Open in IMG/M
3300028810|Ga0307294_10261525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300028814|Ga0307302_10276720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium824Open in IMG/M
3300028824|Ga0307310_10184223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium979Open in IMG/M
3300028828|Ga0307312_11043382Not Available541Open in IMG/M
3300028875|Ga0307289_10063474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1486Open in IMG/M
3300031797|Ga0318550_10345994Not Available720Open in IMG/M
3300031854|Ga0310904_10582460Not Available761Open in IMG/M
3300031996|Ga0308176_12463294Not Available555Open in IMG/M
3300032075|Ga0310890_10428122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium989Open in IMG/M
3300032089|Ga0318525_10050338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2067Open in IMG/M
3300032180|Ga0307471_103873855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300032205|Ga0307472_102176351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium559Open in IMG/M
3300032954|Ga0335083_11119406Not Available614Open in IMG/M
3300033551|Ga0247830_10986189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium672Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.70%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.13%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.31%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.48%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere2.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.65%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.65%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.65%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.65%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.65%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.65%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.65%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere1.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.65%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.83%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.83%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.83%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005165Soil and rhizosphere microbial communities from Laval, Canada - mgHMCEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009815Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1394547823300000363SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFV
JGI10216J12902_10896129713300000956SoilVSDERTLVAGTAANVIGLVFGVVAALGIQILLGRTLAPGAFGLVTVAVQVAFVASAGARFGMDMAAVRLV
JGI25407J50210_1007059313300003373Tabebuia Heterophylla RhizosphereVNDERTLAAGTALXVVGLCAGIAAALGTQILLGRTLLPGAFGVVTVAVQVAFVAAAGSRFGMDMAAVRLVA
JGI25407J50210_1017191913300003373Tabebuia Heterophylla RhizosphereVSDERTLLAGTAANVIGLCAGILAALGTQILLGRTLVPGGFGIVTIAVQVAFVAAAGSRFGMDMAAVRL
Ga0063454_10119998913300004081SoilMNDQRALLSGTAVNVAGLVAGVIAAYGVQILVGRGLGADGLGLVTVAVQVAFVAAAGSRFGMDLAAVREVAIA
Ga0062593_10047847213300004114SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGR
Ga0063455_10036332013300004153SoilVSEERTLLAGTAANVAGLVVGVAAALGVQILLGRTLAPGGFGLVTVAVQVAFVASAGSRF
Ga0062589_10194821013300004156SoilLPREPGEGVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRG
Ga0062590_10008306633300004157SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIG
Ga0062595_10184655423300004479SoilVSEERTLLTGTAVNVVGLVAGVLAALGVQILLGHALEPGAFGLVTVAVQVAFVASAGSRFGMDMAAVRLV
Ga0062594_10092881513300005093SoilMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVA
Ga0066869_1000187943300005165SoilMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDL
Ga0070676_1154850723300005328Miscanthus RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSNRSATLRSLVDRCTLLAVGVSVAASVVI
Ga0070682_10040852623300005337Corn RhizosphereMSDHRTLLSGTALNVAGLAAGVVAAYGVQLVFARQLPDGGLGLVTVAVQVAFVAAAGSRFGMDLATVRDVAIGVGRSDRAHLRSLV
Ga0068868_10089603313300005338Miscanthus RhizosphereMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAAGSRFGMDLA
Ga0070689_10108281213300005340Switchgrass RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIGTGTDDMSHLR
Ga0070687_10038949313300005343Switchgrass RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATV
Ga0070667_10155827513300005367Switchgrass RhizosphereMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAAGS
Ga0068867_10028159713300005459Miscanthus RhizosphereMLLSGTALNVAGLAAGVVAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAG
Ga0073909_1012581213300005526Surface SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLV
Ga0073909_1031283433300005526Surface SoilMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSNRSATLRSLVDRCT
Ga0070679_10107502123300005530Corn RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSNRSATLRSLV
Ga0070695_10048539133300005545Corn, Switchgrass And Miscanthus RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGM
Ga0070696_10093161323300005546Corn, Switchgrass And Miscanthus RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAV
Ga0070665_10171048523300005548Switchgrass RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIGTGTDDMSHLRSLVGRCAG
Ga0068854_10021396733300005578Corn RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRF
Ga0068856_10126971223300005614Corn RhizosphereMSDHRTLLSGTALNIVGLGAGVAAAFGVQVLMGRQLGRSGLGLVTVAVQVGFVAAAGSRFGMDLSAVRDVAIGQGAGRVATLRSLVDRCTGIAF
Ga0070702_10047195113300005615Corn, Switchgrass And Miscanthus RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVREVAIGVGAADRAHLRSLVERCALIAG
Ga0070702_10071701113300005615Corn, Switchgrass And Miscanthus RhizosphereMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAAGSR
Ga0068859_10257493523300005617Switchgrass RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIGAGTDDMSHLRSLVDRCAGIA
Ga0068861_10045695033300005719Switchgrass RhizosphereMAPVSDHRMLLSGTALNVAGLAAGVVAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAG
Ga0097621_10121333313300006237Miscanthus RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRTLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIGAG
Ga0068871_10145728323300006358Miscanthus RhizosphereMSDHRTLLSGTALNVAGLAAGVVAAYGVQLVFARQLPDGGLGLVTVAVQVAFVAAAGSRFGMDLATVRDVAIGVGRSDRAHLRSLVERCALIAGV
Ga0068871_10192034613300006358Miscanthus RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAA
Ga0079222_1263459413300006755Agricultural SoilMAVSDERVLLRGTAANVAGLLAGVAAAFGVQVLLGRTLPAGGLALVTIAVQVAFVASAGARFGMD
Ga0075425_10263993113300006854Populus RhizosphereVSDERVLLRGTAANVVGLLAGVAAAFGVQVLLGRTLPAGGLALVTIAVQVAFVASAGAR
Ga0075434_10017432433300006871Populus RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSDRSATLRSLIDRCTLLAVGVSVAATA
Ga0068865_10003345953300006881Miscanthus RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSA
Ga0068865_10116712323300006881Miscanthus RhizosphereMAPVSDHRMLLSGTALNVAGLAAGVVAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGM
Ga0074063_1000450113300006953SoilMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDV
Ga0105241_1002043263300009174Corn RhizosphereMGVSDERVLLRGTAANVVGLLAGVAAAFGVQVLLGRTLPAGGLALVTIAVQVAFVASAGARFGM
Ga0105241_1155826613300009174Corn RhizosphereMSDHRTLLSGTALNVAGLAAGVVAAYGVQLVFARQLPDGGLGLVTVAVQVAFV
Ga0105248_1092194113300009177Switchgrass RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIG
Ga0105238_1063288513300009551Corn RhizosphereMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAAGSRFGMDL
Ga0105070_106520413300009815Groundwater SandLSVERTLLSGTAANVVGLCVGVAAALGTQILLGRTLLPGAFGIVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRG
Ga0126315_1072623923300010038Serpentine SoilVSEERTLLAGTAANVIGLGVGIASALGLQILLGRTLVPGAFGLVTVAVQVAFVAAAGSRFGMDMAAVRLVAIGRGA
Ga0126312_1102819023300010041Serpentine SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRGALDVGNLRS
Ga0126370_1258284913300010358Tropical Forest SoilVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIGAGTNEMSHLRSLVDRCAGIALVAGLVL
Ga0150985_11756627823300012212Avena Fatua RhizosphereVSEERTLLAGTAANVAGLVVGVAAALGVQILLGRTLAPGGFGLVTVAVQVAFVASAGSRFGMDMASVRSEE
Ga0157305_1022766613300012891SoilVSEERTLLTGTALNVVGLVAGVLSALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRGALDVGNLRSLVDR
Ga0164306_1090206913300012988SoilMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSNRSATLRSLVDRCTLLAVGVSV
Ga0164306_1135329623300012988SoilMPAGEGVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPNGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIG
Ga0163162_1133708833300013306Switchgrass RhizosphereMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGASGLGLVTVAVQVAFVAAAG
Ga0163162_1276726623300013306Switchgrass RhizosphereVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRGALHVGNLRSLV
Ga0157372_1236062123300013307Corn RhizosphereMSDHRTLLSGTALNIVGLGAGVAAAFGVQVLMGRQLGRSGLGLVTVAVQVGFVAAAGSRFGMDLSAVRDVAI
Ga0075322_104264613300014311Natural And Restored WetlandsVTEERTLLTGTALNVVGLIAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASA
Ga0163163_1202601223300014325Switchgrass RhizosphereMGVSDERVLLRGTAANVVGLLAGVAAAFGVQVLLGRTLPAGGLALVTIAVQVAFVASGGARFGMGVAAVRVVGIGEGAGEPGRL
Ga0157379_1136032213300014968Switchgrass RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIG
Ga0157376_1148478813300014969Miscanthus RhizosphereMHVSDERVLLRGTAANAVGLLAGVAAAFGVQILLGRSLPAGGLALVTIAVQIAFVASAGA
Ga0132258_1139209823300015371Arabidopsis RhizosphereVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRGAR
Ga0184609_1004666513300018076Groundwater SedimentVSEERTLLAGTAANVIGLGVGIASALGLQILLGRTLVPGGFGLVTVAVQVAFVASAGSRFGMDMAAVR
Ga0190270_1000276583300018469SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHALPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRGALDVGNLRSLV
Ga0210378_1017704913300021073Groundwater SedimentVSEERTLLVGTAANVIGLGVGIASALGLQILLGRTLVPGAFGLVTVAVQVAFVASAGSRFGMDMAAVRLVA
Ga0224712_1011738723300022467Corn, Switchgrass And Miscanthus RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIGAGTGDMSHLRSLVD
Ga0247745_110024623300022898SoilMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAA
Ga0247794_1016361813300024055SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMD
Ga0210143_109562013300025792Natural And Restored WetlandsVTEERTLLTGTALNVVGLIAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAIRFVAIG
Ga0207688_1010476923300025901Corn, Switchgrass And Miscanthus RhizosphereMGVSDERVLLRGTAANVVGLLAGVAAAFGVQVLLGRTLPAGGLALVTIAVQVAFVASAGARF
Ga0207688_1046870323300025901Corn, Switchgrass And Miscanthus RhizosphereMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAAGSRFGMDLASVREVAIGVGVGGTGHLRSLV
Ga0207663_1119449313300025916Corn, Switchgrass And Miscanthus RhizosphereMSDHRTLLSGTALNIVGLAAGVAAAFGVQVLMGRQLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAITRGAGQLRTMR
Ga0207663_1127688423300025916Corn, Switchgrass And Miscanthus RhizosphereVSDHRALLHGTAVNVVGLGAGVVAAFGVQILLGRTLPVGGLGLVTVAVQVAFVAAAGSRFGMDMAAVREVAIAN
Ga0207694_1044206313300025924Corn RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVREVAIGV
Ga0207687_1016539543300025927Miscanthus RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLAT
Ga0207687_1025382013300025927Miscanthus RhizosphereVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGCG
Ga0207687_1055698913300025927Miscanthus RhizosphereMAPVSDHRTLLSGTALNVAGLAAGVVAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVREVA
Ga0207690_1059198923300025932Corn RhizosphereVTDERTLLAGTGANVIGLAAGVLAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGLDLASVRA
Ga0207706_1082859613300025933Corn RhizosphereVSEERTLLTGTALNVAGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIG
Ga0207686_1095993113300025934Miscanthus RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVREVAIGVGAADRAHLRSLVER
Ga0207669_1124444613300025937Miscanthus RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVREVAIGVGAA
Ga0207711_1061276733300025941Switchgrass RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSDRSATLRSLVDRCTLLAIGVS
Ga0207667_1132600423300025949Corn RhizosphereVTDERTLLAGTGANVIGLAAGVLAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVA
Ga0207668_1076115323300025972Switchgrass RhizosphereMAPVSDHRTLLSGTALNVAGLAAGVVAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVREVAIGVGAADRAHLRSLVERCAVLRLRIGVALT
Ga0207640_1017415333300025981Corn RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVREVAIG
Ga0207640_1057629133300025981Corn RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSDRSATLRSLVDRC
Ga0207677_1048087733300026023Miscanthus RhizosphereMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAAGSRFGMDLASVREVAIGVGAGGA
Ga0207702_1100473313300026078Corn RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRTLPHGGLALVTVAVQFAFVAAAGARFGMDLASVR
Ga0207702_1247584423300026078Corn RhizosphereMSDHRTLLSGTALNIVGLGAGVAAAFGVQVLMGRQLGRSGLGLVTVAVQVGFVAAAGSRFGMDLSAVRDVAIGQGAGRVATLRSLVDRCTGIAFCVSVA
Ga0207674_1188695123300026116Corn RhizosphereVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHALPPGGFGLVTVAVQVAFVASAG
Ga0207698_1011905233300026142Corn RhizosphereMGVSDERVLLRGTAANVVGLLAGVAAAFGVQVLLGRTLPAGGLALVTIAVQVAFVAS
Ga0268266_1021743033300028379Switchgrass RhizosphereMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSDRSATLRSLVDRCT
Ga0268266_1133900423300028379Switchgrass RhizosphereVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPHGGLALVTVAVQFAFVAAAGARFGMDLASVRAVAIGTGTDDMSHLRSLVGRCAGIAL
Ga0268265_1180605313300028380Switchgrass RhizosphereMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVRE
Ga0247820_1124364613300028597SoilMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAAGSRFGMDLASVREVAIGVGVIC
Ga0307293_1027724413300028711SoilVSEERTLLAGTAANVIGLGVGIASALGLQILLGRTLVPGGFGLVTVAVQVAFVASAGSRFGMD
Ga0307298_1016945823300028717SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSR
Ga0307301_1004419413300028719SoilVSEERTLLTGTAVNVVGLVCGVLAALGVQILLGHALPPGGFGLVTVAVQVAFVASAGSRF
Ga0307315_1020598923300028721SoilVSEERTVLTSTAANVVGLCFGVVAAVAVQVLLGRTLAPGAFGLVTVAVQVAFVASAGSRFGMDMASVRLVAIGRGAGAPGNLRSLVERCALVAFG
Ga0307316_1028927023300028755SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRGAL
Ga0307282_1038208933300028784SoilVASPGVREERTLLVGTAANVAGLLVGVAAAFGIQILLGRTLAPGGFGLVTVAVQVAFVASAGSRFGM
Ga0307282_1042563733300028784SoilMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSD
Ga0307290_1006454823300028791SoilVSEERTLLAGTAANVIGLGVGIASALGLQILLGRTLVPGAFGLVTVAVQVAFVASAGSR
Ga0307290_1029365623300028791SoilVSDERVLLRGTVANVAGLLAGVAAAFGVQVLLGRSLPAGGLALVTIAVQVAFVASAGA
Ga0307299_1009992013300028793SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDM
Ga0247824_1032949113300028809SoilMAPVSDHRTLLSGTALNVAGLAAGVVAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRHE
Ga0307294_1026152513300028810SoilVSEERTLLTGTALNVVGLVAGVLAALGVQILLGHTLPPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRLVAIGRGALDVGNLRSLVDRCA
Ga0307302_1027672023300028814SoilVVGLGVGVAAALGVQILLGRALLPGAFGLVTVAVQVAFVAAAGSRFGMDMAAVRLVAIGRGAGAAEHL
Ga0307310_1018422323300028824SoilVSEERTVLTSTAANVVGLCVGVVAAVAVQVLLGRTLAPGAFGLVTVAVQVAFVASAGSRFGMDMASVRLVAIGRGAGAPGNLRSLVE
Ga0307312_1104338213300028828SoilMSDERTLLSGTAVNIAGLVAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGSRFGMDLSAVRDVAIGRGSDRSATLRSLVD
Ga0307289_1006347423300028875SoilVSEERTVLTSTAANVVGLCVGVVAAVAVQVLLGRTLAPGAFGLVTVAVQVAFVASAGSRFGMDMASVRLVAIGRGAGAPENLRSLVE
Ga0318550_1034599433300031797SoilMSTTHHHDERTLLSGTALNIAGLLAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFVAAAGTRFG
Ga0310904_1058246033300031854SoilMTDQRTLLSGTAVNVAGLVAGVVAAYGVQVLVGRQLGAGGLGLVTVAVQVAFVAAAGSRFGMDLASVREVAIGV
Ga0308176_1246329413300031996SoilMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLA
Ga0310890_1042812223300032075SoilVSEERTLLTGTAANVAGLIVGIAAALGVQILLGRGLEPGGFGLVTVAVQVAFVASAGSRFGMDMAAVRL
Ga0318525_1005033813300032089SoilMSTTHHHDERTLLSGTALNIAGLLAGVAAAFGVQILMGRHLGRSGLGLVTVAVQVAFV
Ga0310895_1057234523300032122SoilMTPASDHRTLLSGTALNVAGLAAGVIAAYGVQLVFARQLPTGGLGLVTVAVQVAFVAAAGSRFGMDLATVREVAIGVGAADRAHLRSLVERCALV
Ga0307471_10387385513300032180Hardwood Forest SoilMSDHRTLLAGTAANVIGLAAGVLAAFGVQVLLGRSLPAGGLGVVTVAVQIAFVAAAGGRFGMDMTAIRRVAMAEGGTGDRASMR
Ga0307472_10217635123300032205Hardwood Forest SoilMHVSDERVLLRGTAANVVGLLAGVAAAFGVQVLLGRSLPAGGLALVTIAVQIAFVASAGARFGMD
Ga0335083_1111940623300032954SoilVSDHKALLHGTALNVVGLGAGVVAAFGVQILLGRTLPVGGLGLVTVAVQVAFVAAAGSRFGMDMAAVREVAIAHGADAATRVR
Ga0247830_1098618913300033551SoilMGVSDERVLLRGTAANVVGLLAGVAAAFGVQVLLGRTLPAGGLALVTIAVQVAFVASAGA
Ga0372943_0031002_1_2943300034268SoilMSDHRTLLSGTALNIVGLAAGVAAAFGVQVLMGRHLGRPGLGVVTVAVQVAFVAAAGSRFGMDLSAVRDVAIRRGADRLATLRSLVERCTAIAFGVSV
Ga0373959_0167382_362_5653300034820Rhizosphere SoilMPAGEGVTDERTLLAGTGANVIGLAAGVVAAFGVQLLLGRSLPNGGLALVTVAVQFAFVAAAGARFGM

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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