Metagenome Family F072512

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072512
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	64 residues
Representative Sequence	MAVGVIGEENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGILGFLVVTLAARAYGG
Number of Associated Samples	87
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.77 %
% of genes near scaffold ends (potentially truncated)	81.82 %
% of genes from short scaffolds (< 2000 bps)	80.99 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.256 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (24.793 % of family members)
Environment Ontology (ENVO)	Unclassified (28.099 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF11154	DUF2934	8.26
PF04430	DUF498	4.96
PF04392	ABC_sub_bind	3.31
PF04185	Phosphoesterase	2.48
PF00226	DnaJ	2.48
PF00199	Catalase	1.65
PF02801	Ketoacyl-synt_C	1.65
PF00076	RRM_1	1.65
PF13492	GAF_3	1.65
PF02585	PIG-L	0.83
PF00206	Lyase_1	0.83
PF00582	Usp	0.83
PF05524	PEP-utilisers_N	0.83
PF05239	PRC	0.83
PF04120	Iron_permease	0.83
PF04542	Sigma70_r2	0.83
PF00156	Pribosyltran	0.83
PF13518	HTH_28	0.83
PF00589	Phage_integrase	0.83
PF01381	HTH_3	0.83
PF13738	Pyr_redox_3	0.83
PF07883	Cupin_2	0.83
PF13537	GATase_7	0.83
PF07732	Cu-oxidase_3	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	4.96
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	4.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.31
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	2.48
COG0753	Catalase	Inorganic ion transport and metabolism [P]	1.65
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.83
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.26 %
Unclassified	root	N/A	10.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.26 %
Unclassified	root	N/A	10.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.26 %
Unclassified	root	N/A	10.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.74 %
Unclassified	root	N/A	10.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.65 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	7.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.65 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.83 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.74 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	6.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.96 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.65 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.83 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.96 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1.65 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.83 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.83 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.96 %
Paraburkholderia franconis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia franconis	1.65 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.83 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.83 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.96 %
Paraburkholderia franconis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia franconis	1.65 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	0.83 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.83 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.96 %
Paraburkholderia franconis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia franconis	1.65 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.83 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	0.83 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01BV2JR	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300000550\|F24TB_10628828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	934	Open in IMG/M
3300000550\|F24TB_11028824	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300000955\|JGI1027J12803_101457626	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300000955\|JGI1027J12803_109017238	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300000956\|JGI10216J12902_101403348	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300000956\|JGI10216J12902_107070018	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300002908\|JGI25382J43887_10450030	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300004267\|Ga0066396_10011886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300004633\|Ga0066395_10223922	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300005172\|Ga0066683_10057372	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300005289\|Ga0065704_10012029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2351	Open in IMG/M
3300005289\|Ga0065704_10395639	Not Available	757	Open in IMG/M
3300005295\|Ga0065707_10809071	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005332\|Ga0066388_101237084	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300005332\|Ga0066388_104989796	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005332\|Ga0066388_106559751	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005332\|Ga0066388_108166868	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005332\|Ga0066388_108520850	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005445\|Ga0070708_101360966	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005446\|Ga0066686_10805713	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005467\|Ga0070706_101794998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300005468\|Ga0070707_102356071	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005518\|Ga0070699_100881061	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005536\|Ga0070697_101866664	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005552\|Ga0066701_10765224	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005555\|Ga0066692_10517648	Not Available	758	Open in IMG/M
3300005764\|Ga0066903_108381340	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006034\|Ga0066656_10683993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300006049\|Ga0075417_10028425	All Organisms → cellular organisms → Bacteria	2297	Open in IMG/M
3300006049\|Ga0075417_10619005	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300006194\|Ga0075427_10011681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1326	Open in IMG/M
3300006844\|Ga0075428_101883705	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300006844\|Ga0075428_102519239	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006845\|Ga0075421_100217235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2358	Open in IMG/M
3300006846\|Ga0075430_101090688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia franconis	658	Open in IMG/M
3300006853\|Ga0075420_101136328	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006854\|Ga0075425_100127862	All Organisms → cellular organisms → Bacteria → Proteobacteria	2903	Open in IMG/M
3300006854\|Ga0075425_100258934	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300006854\|Ga0075425_101165211	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300006854\|Ga0075425_102906003	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006871\|Ga0075434_100165584	All Organisms → cellular organisms → Bacteria → Proteobacteria	2231	Open in IMG/M
3300006871\|Ga0075434_101625257	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300006880\|Ga0075429_100203765	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300006903\|Ga0075426_10178344	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300006904\|Ga0075424_101202996	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300006904\|Ga0075424_102299026	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300007076\|Ga0075435_100600430	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300007076\|Ga0075435_101341815	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300007255\|Ga0099791_10085762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1439	Open in IMG/M
3300009147\|Ga0114129_10344241	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300009147\|Ga0114129_11957666	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300009162\|Ga0075423_10285314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1730	Open in IMG/M
3300009162\|Ga0075423_12739226	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300009792\|Ga0126374_10431641	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300009820\|Ga0105085_1127008	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010047\|Ga0126382_12312070	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300010304\|Ga0134088_10020396	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300010336\|Ga0134071_10270222	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300010358\|Ga0126370_10017905	All Organisms → cellular organisms → Bacteria	4001	Open in IMG/M
3300010358\|Ga0126370_10607074	Not Available	946	Open in IMG/M
3300010358\|Ga0126370_11102057	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300010361\|Ga0126378_10701921	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300010361\|Ga0126378_10817139	Not Available	1041	Open in IMG/M
3300010361\|Ga0126378_12275255	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010366\|Ga0126379_10515392	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300010366\|Ga0126379_13190845	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300010376\|Ga0126381_100340948	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300010376\|Ga0126381_103949396	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010376\|Ga0126381_104485748	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300012204\|Ga0137374_10178407	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300012349\|Ga0137387_11211034	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012350\|Ga0137372_10168891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1773	Open in IMG/M
3300012356\|Ga0137371_10514839	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300012358\|Ga0137368_10042303	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300012361\|Ga0137360_10141855	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300012685\|Ga0137397_10560451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia franconis	850	Open in IMG/M
3300012922\|Ga0137394_10771726	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012922\|Ga0137394_10780444	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	801	Open in IMG/M
3300012923\|Ga0137359_10103362	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300012930\|Ga0137407_10071596	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300012948\|Ga0126375_10056155	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300012948\|Ga0126375_10351805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300012971\|Ga0126369_11726385	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300012989\|Ga0164305_12103340	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300016422\|Ga0182039_11897189	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300018028\|Ga0184608_10284594	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300018072\|Ga0184635_10056856	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300018075\|Ga0184632_10016395	Not Available	3116	Open in IMG/M
3300018076\|Ga0184609_10455512	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300018431\|Ga0066655_10100889	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300018433\|Ga0066667_11802061	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300019789\|Ga0137408_1196082	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300021088\|Ga0210404_10623190	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300021560\|Ga0126371_12690990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300022756\|Ga0222622_10616165	Not Available	784	Open in IMG/M
3300025922\|Ga0207646_10717725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	893	Open in IMG/M
3300025922\|Ga0207646_11279081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300026313\|Ga0209761_1348914	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300026324\|Ga0209470_1264657	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300027277\|Ga0209846_1013961	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300027909\|Ga0209382_10466471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	1396	Open in IMG/M
3300031231\|Ga0170824_118102438	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031720\|Ga0307469_10179833	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300031720\|Ga0307469_10589752	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	991	Open in IMG/M
3300031744\|Ga0306918_10746854	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300031820\|Ga0307473_10688717	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031945\|Ga0310913_11242884	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031962\|Ga0307479_12126905	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300032174\|Ga0307470_10629273	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300032180\|Ga0307471_100102099	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2606	Open in IMG/M
3300032180\|Ga0307471_101715546	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300032180\|Ga0307471_102036785	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300032205\|Ga0307472_102756073	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.55%
Host-Associated	Host-Associated	26.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.42%
Plants	Host-Associated → Plants	26.45%
Aquatic	Environmental → Aquatic	4.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.79%
Sediment	Environmental → Aquatic → Sediment	4.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.79%
Loam	Environmental → Terrestrial → Soil → Loam	14.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.13%
Sand	Environmental → Terrestrial → Soil → Sand	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.13%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	24.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_2272370	2040502001	Soil	TRSFERIEIWSRTDDPMAVGVIGEEKPRYFSIVRWGDAKIALAQVKRRLFVEKWLLRLTATGGSCFFSSPYSL
F24TB_106288281	3300000550	Soil	KPRYFSIVRWGDAELTLAQVKRRLWVEKWLLLLTALGGIGFFAVTLVALAFGG*
F24TB_110288241	3300000550	Soil	GDPMAVGVIGEEKPRYFSIVRWGDAELTLEQVKERLRVEKWMTWLTAAAGILFFVIVPFAAMAHGW*
JGI1027J12803_1014576261	3300000955	Soil	FSIVRWGDAKLTLAQVRRRLWVEKWLLPLTATSGILVFLVARFIVVAYGG*
JGI1027J12803_1090172381	3300000955	Soil	DPMAVGVIGEENPRYFSIARWGDAELTLEQAKERLRVEKWLFWLTASGGVLVFLITMFAAVAHGG*
JGI10216J12902_1014033482	3300000956	Soil	MAVGVIGEENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGIGFLTVMLAAIPYG*
JGI10216J12902_1070700181	3300000956	Soil	RYFSIVRWGDAKLTLAQAKRRLWVEKWLLQLTATGGIIIFLATLFIVMAYGG*
JGI25382J43887_104500301	3300002908	Grasslands Soil	MAVGVIGEENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGIGFLTVMLAAMPYGG*
Ga0066396_100118863	3300004267	Tropical Forest Soil	EKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLPLTATSVAMVFLVARFIGVAYGG*
Ga0066395_102239221	3300004633	Tropical Forest Soil	WSRATDPMAVGVIGREKPRYFSIVRWGDAKLTLEQVKRRLWVEKWLLLATAIGGVGFFAVTLAASGYGG*
Ga0066683_100573722	3300005172	Soil	PRYFSIVRWGDAKLTPAQVKRRLWVEKWLLPLTATGGILVFLVPMFAVVAYGWITAGF*
Ga0065704_100120291	3300005289	Switchgrass Rhizosphere	MAVGVIGEEKPRYFSIVRWGDAKLRLAQVKRRLRVEKWLLRLTAIGGIMIFLVTLFVVVVNGG*
Ga0065704_103956392	3300005289	Switchgrass Rhizosphere	MAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLRLTAIGGIMIFLVTLFVVVVNGG*
Ga0065707_108090711	3300005295	Switchgrass Rhizosphere	DPMAVGIIGEEKPRYFSIVRWGDAELTLAQVKRRLWIEKWLLRLTATGGILAFLVLTLAARAYGG*
Ga0066388_1012370843	3300005332	Tropical Forest Soil	AQDPMAVGVVGKEKPRYFSIVRWGDAELTMAQVKRRLWVEKWLFQLTATGAILVILVIMFAIMTHGWIT*
Ga0066388_1049897962	3300005332	Tropical Forest Soil	VGVIEGENPRYFSIARWGDAKLTLAQVKRRLWIDKWLLLLAATGGIGFFALTLTVIPHGG
Ga0066388_1065597511	3300005332	Tropical Forest Soil	RLFDRVEIWSSAGDPMAVGVIGEENPRYFSIACWGDAELTLEQVKEKLQLEKCLLRLTATGGILVFLVTMFATVTYNGRVLIWQ*
Ga0066388_1081668682	3300005332	Tropical Forest Soil	YFSIVRWGDAKLTLAQVKRRLWVEKWLFQLTATGAILVFLIIMFAIMTHGWIT*
Ga0066388_1085208502	3300005332	Tropical Forest Soil	VGVIEGENPRYFSIARWGDAKLTLAQVKRRLWIDKWLLLLTATGGIGFFALTLTVISHGG
Ga0070708_1013609661	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DPMAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLPLTATSVVMVYLVARFIVVAYGG*
Ga0066686_108057131	3300005446	Soil	EIWSRAADPMAVGIIGEEKPRYFSIVRWGDAELTLAQVKRRLWVEKWLLPLTATGGILVFLVTMFATGG*
Ga0070706_1017949982	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	DDPMAVGVIGEEKPRYFSIVRWGDAKLRLAQVKRRLRVEKWLLRLTAIGGIMIFLVTLFVVVVNGG*
Ga0070707_1023560712	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RAGDPMAVGVIGEEKPRYFSIVRWGDAELTLEQVKERLRVEKWIISLTATGGIMFFLVTLFAVAAYGWLTAGFPN*
Ga0070699_1008810612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GVIGEEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLPLTATSVVMVYLVARFIVVAYGG
Ga0070697_1018666642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EEKPRYFSIVRWGDAKLTLAQVKRRLWVQKWLLPLTATGGIMVFLVTMFAVVSYGWITVAF*
Ga0066701_107652242	3300005552	Soil	RYFSIVRWGDAELTLAQVKRRLWVEKWIVWLTSTGGILVCLAATLAAVAYGG*
Ga0066692_105176481	3300005555	Soil	PRYFSIARWGDAEFTLEQAKERLRVEKWLFWLTASGGVLVFLITMFAAVAHGG*
Ga0066903_1083813402	3300005764	Tropical Forest Soil	MAVGVIGEENPRYFSIVRWGDAELTLAQVKRRLWVEKWLPLLTATAGIGLLALTLATMAHGG*
Ga0066656_106839931	3300006034	Soil	GVIGEEKPRYFSIVRWGDAELTLAQVKRRLWVEKWLLPLTATGGILVFLVPMFAVVAYGWITAGF*
Ga0075417_100284251	3300006049	Populus Rhizosphere	RYFSIVRWGDAELTLAQVKRRLWVEKWLLLLTATGGISFFLVATLVVVAHGG*
Ga0075417_106190051	3300006049	Populus Rhizosphere	MAVGVIGEEKPRYFSIARWGDAKLTLAQVKRRLRAEKWLLRLTAIGGIMIFLATLFVVVTSGG*
Ga0075427_100116813	3300006194	Populus Rhizosphere	FDRVEIWSRAGDPMAVGVIGEENPRYFSIACWGDAELTLEVKEKLQLEKCLLRLTSTGGILVFLVTMFATVTYGWITVGF*
Ga0075428_1018837052	3300006844	Populus Rhizosphere	FSIVRWGDAELTLAQVKRRLWVEKWLLLLTATGGISFFLVATLVVVAHGG*
Ga0075428_1025192391	3300006844	Populus Rhizosphere	VGVIGEEKPRYFSIVRWGDAKLTRAQVKRRLRVEKCLLRLTATGGVMFFLVTLFAVMAYGWITVGFLN*
Ga0075421_1002172356	3300006845	Populus Rhizosphere	RIEIWSRAGDPMAVGVIGEEKPRYFSIVRWGDAELTLAQAKKRLRVEKWLLWLTPTVGILGFLVATLVAVARGG*
Ga0075421_1016041711	3300006845	Populus Rhizosphere	VGVIGEEKPRYFSIVRWGDAKLRLAQVKRRLRVEKWLLRLTAIGGIMIFLVTMFVVVVNGG*
Ga0075430_1010906881	3300006846	Populus Rhizosphere	VRWGDAELTLAQVKRRLWVEKWLLLLTATGGISFFLVATLVVVAHGG*
Ga0075431_1007422732	3300006847	Populus Rhizosphere	VGVIGEEKPRYFSIVRWGDAELTLAQAKKRLRVEKWLLWLTPTVGILGFLVATLVAVARGG*
Ga0075433_110541701	3300006852	Populus Rhizosphere	VGVIGEEKPRYFSIVRWGDAKLRLAQVKRRLRVEKWLLRLTAIGGIMIFLVTLFVVVVNGG*
Ga0075420_1011363282	3300006853	Populus Rhizosphere	DPMAVGVIGEEKPRYFSIVRWGDAELTLEQVKERLRVEKWMTWLTAAAGILFFVIVPFAAMAHGW*
Ga0075425_1001278622	3300006854	Populus Rhizosphere	MAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLRLTATGGVMFFLVTLFAVMAYGWITVGFLN*
Ga0075425_1002589343	3300006854	Populus Rhizosphere	IEIWSRADDPMAVGVIGEEKPRYFSIVRWGDAKLTLAQVRRRLWVEKWLLPLTATSGILVFLVARFIVVAYGG*
Ga0075425_1011652112	3300006854	Populus Rhizosphere	IEIWSRADDPMAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRKLRVEKWVFSLTASAGILVFLITMFATAAYDWITVGFGFN*
Ga0075425_1029060031	3300006854	Populus Rhizosphere	EEKPRYFSIVRWGDAELTLAQVKRRLWVEKWLLLLTATGGISFFLVATLVVVAHGG*
Ga0075434_1000779011	3300006871	Populus Rhizosphere	APRLFDRVEIWSRAGDPMAVGVIGEENPRYFSIACWGDAELTLEVKEKLQLEKCLLRLTSTGGILVFLVTMFATVTYGWITVGF*
Ga0075434_1001655844	3300006871	Populus Rhizosphere	VGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLRLTATGGVMFFLVTLFAVMAYGWITVGFLN*
Ga0075434_1016252572	3300006871	Populus Rhizosphere	MAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLGLTATGGIMVLLAALFIVVAYGG*
Ga0075429_1002037653	3300006880	Populus Rhizosphere	RYFSIVRWGDAELTLEQVKERLRVEKWMTWSTAAAGILFLVIVTFAAMAHGW*
Ga0075426_101783443	3300006903	Populus Rhizosphere	IVRWGDAELTLAQVKRRLWVEKWLLLLTATGGISFFLVATLVIVAHGG*
Ga0075424_1012029962	3300006904	Populus Rhizosphere	AVGVIGEEKPRYFSIVRWGDAKLTLAQVKRKLRVEKWVFSLTASAGILVFLITMFATAAYDWITVGFGFN*
Ga0075424_1022990262	3300006904	Populus Rhizosphere	VGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLGLTATGGIMVLLAALFIVVAYGG*
Ga0075435_1006004301	3300007076	Populus Rhizosphere	GIIGEEKPRYFSIVRWGDAELTLAQVKRRLWVEKWLLLLTATGGISFFLVATLVVVAHGG
Ga0075435_1013418151	3300007076	Populus Rhizosphere	DRIEIWSRANDPMVVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLRLTAIGGIMIFLVTLFVVVASGG*
Ga0099791_100857621	3300007255	Vadose Zone Soil	HIEIWSRTDDPMAVGIIGEENPRYFSIVRWGNAKLTLAQVKRRLWFEKWLLRLTAAGGIMVFLATLFIVVAYAG*
Ga0075418_116661942	3300009100	Populus Rhizosphere	IGEENPRYFSIVRWGGADLNLEQAKKRLRVQKWLLWLTPTVGILSFLVAALAAAARGG*
Ga0114129_103442415	3300009147	Populus Rhizosphere	WSRTDDPMAVGVIGEEKPRYFSIVRWGDAKLTRAQVKRRLRVEKCLLRLTATGGVMFFLVTLFAVMAYGWITVGFLN*
Ga0114129_119576661	3300009147	Populus Rhizosphere	IWSRTGDPMAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLGLTATGGIMVLLAALFIVVAYGG*
Ga0075423_102853141	3300009162	Populus Rhizosphere	RIEIWSRAGDPMAVGVIGEEKPRYFSIVRWGDAELTLAQVKRRLWIEKWLLWLTPTAGILGFLVATLAAAARGG*
Ga0075423_127392261	3300009162	Populus Rhizosphere	IVRWGDAELTLAQVKRRLWVEKWLLLLTATGGISFFLVATLVVVAHGG*
Ga0126374_104316412	3300009792	Tropical Forest Soil	IEGKNPRYFAIARWGDAKLTLAQVKRRLWFDKWLLLLSATGGIGFFALTLTAIPHGG*
Ga0105085_11270082	3300009820	Groundwater Sand	DPMAVGIIGEEKPRYFSIVRWGDAELTLAQVKRRLWIEKWLLRLTATGGILGFLVATLAARAYGG*
Ga0126382_123120701	3300010047	Tropical Forest Soil	FDRIEIWSRAGDPMAVGVIEGENPRYFSIVRWGDAKLTLAQVKRRLWIDKWLLLLTATGGIGFFALILATIP*
Ga0134088_100203961	3300010304	Grasslands Soil	MAVGVIGEENPRYFSIVRWGDAKLTPAQVKRRLWVEKWLLPLTATGGILVFLVTMFATGG
Ga0134071_102702221	3300010336	Grasslands Soil	YFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGIGFLTVMLAAMPYGG*
Ga0126370_100179051	3300010358	Tropical Forest Soil	RAQDPMAVGVVGKEKPRYFSIVRWGDAELTMAQVKRRLWVEKWLFQLTATGAILVILVIMFAIMTHGWIT*
Ga0126370_106070742	3300010358	Tropical Forest Soil	RAQDPMAVGVVGKEKPRYFSIVRWGDAELTMAQVKRRLWVEKWLMLLIWTGGIGFLAVALIAAAHGG*
Ga0126370_111020571	3300010358	Tropical Forest Soil	IVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGIMGFLVMTLATRAYGG*
Ga0126378_107019211	3300010361	Tropical Forest Soil	EEKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLPLTATSVAMFFLVARLILVAYGG*
Ga0126378_108171392	3300010361	Tropical Forest Soil	PMAVGVVGKEKPRYFSIVRWGDAELTMAQVKRRLWVEKWLMLLIWTGGIGFLAVALVAAAHGG*
Ga0126378_122752551	3300010361	Tropical Forest Soil	AVGVVGKEKPRYFSIVRWGDAELTMAQVKRRLWVEKWLFQLTATGAILVILVIMFAIMTHGWIT*
Ga0126379_105153921	3300010366	Tropical Forest Soil	IWSRAGDPMAVGVIEGKNPRYFSIARWGDAKLTLAQVKRRLWIDKWLLLLAATGGIGFFALTLTVIPHGG*
Ga0126379_131908451	3300010366	Tropical Forest Soil	MAVGVIGEENPRYFSIVRWGDAELTLAQVKRRLWVEKWLPLLTATAGIGLLALTLATMAHGR*
Ga0126381_1003409483	3300010376	Tropical Forest Soil	FDRIEIWSRAQDPMAVGVVGKEKPRYFSIVRWGDAELTMAQVKRRLWVEKWLFQLTATGAILVILVIMFAIMTHGWIT*
Ga0126381_1039493961	3300010376	Tropical Forest Soil	FDRIEIWSRAQDPMAVGVVGKEKPRYFSIVRWGDAELTMAQVKRRLWVEKWLMLLIWTGGIGFLAVALIAAAHGG*
Ga0126381_1044857481	3300010376	Tropical Forest Soil	IWSRADDPMAVGVTGEEKPRYFSIVRWGDAKLTLAQVKRKLRAEKWLLLLTETGGIMVFLVTIFAIVAYGWITVGFGFN*
Ga0137363_104677121	3300012202	Vadose Zone Soil	GDAKLTLRQVKRRLWFEKVLLLLTATGGIGFFTVILAGIGYHG*
Ga0137374_101784073	3300012204	Vadose Zone Soil	MAVGVIREENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGIGFLTVILAAMPYGG*
Ga0137387_104351711	3300012349	Vadose Zone Soil	MAVGVIGEENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGIGFLTVML
Ga0137387_112110342	3300012349	Vadose Zone Soil	SRANDPMAVGVIGEEKPRYFSIARWGDAKLTLAQVKRRLRVEKWLLRLTAIGGIMIVLGTLFVVVASGG*
Ga0137372_101688911	3300012350	Vadose Zone Soil	PRYFSIARWGDAELTLAQVKRRLWIEKWLLRLTATGGILGFLVVTLAARAYGG*
Ga0137371_105148393	3300012356	Vadose Zone Soil	MAVGIIGEEKPRYFSIVRWGDAELTLAQVKRRLWIEKWLLRLTATGGIGFLTAMLAAIAYGG*
Ga0137368_100423038	3300012358	Vadose Zone Soil	MAVGVIREENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGIGFLTVMLAAMPYGG*
Ga0137360_101418551	3300012361	Vadose Zone Soil	VIGEEKPRYFSIVRWGDAELTLEQVKERLRVEKWMISLTAAAGILLFVIATFAAVAHGG*
Ga0137397_105604512	3300012685	Vadose Zone Soil	IVRWGDAKLTLAQVKRRLWIEKWLLRLTATGGILFFLVATLVAVAYGG*
Ga0137394_107717261	3300012922	Vadose Zone Soil	DDPMAVGIIGEENPRYFSIVRWGDAKLTVAQAKKTLWIEKWLLWLISTGGIFFFLVTMFAVVPNGG*
Ga0137394_107804442	3300012922	Vadose Zone Soil	DRIEIWSRANDPMAVGVIGEEKPRYFSIVRWGDAKLRLAQAKRRLRVEKWLLRLTAIGGIMIFLVTLFVVVASGG*
Ga0137359_101033625	3300012923	Vadose Zone Soil	IVRWGDAKLTLPQVKRRLRVEKWLLLLTALGGIGFFAVTLVALAFGG*
Ga0137407_100715964	3300012930	Vadose Zone Soil	DRIEIWSRANDPMAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLRLTAIGGIMIFLVTLFVVVANGG*
Ga0126375_100561551	3300012948	Tropical Forest Soil	VIEGKNPRYFSITRWGDAKLTLAQVKRRLWFDKWLLLLTATGGIGFFALTLAAIPHGG*
Ga0126375_103518053	3300012948	Tropical Forest Soil	MAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLPLTATSVAMFFLVARLILVAYGG*
Ga0126369_117263852	3300012971	Tropical Forest Soil	GVIGGETPQYFAIARWGDAKLTLTQIKRILWVDKWLLLLTLTGAFGFVAVKLVAHTLS*
Ga0164305_121033401	3300012989	Soil	FDRIEIWSRANDPMAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLRLTATGGIIFFLVALFVLVAHGG*
Ga0182039_118971891	3300016422	Soil	DDPMAVGVIGEENPRYFSIVRWGDAELTLEQAKERLRVEKWLFWLTASGGIWVFLITMVAAVAHGG
Ga0184608_102845941	3300018028	Groundwater Sediment	DPMAVGVIGEEKPRYFSIVRWGDAKLTLAKVKRRLWVEKWLLRLTATGGIMVFLATLFIVVAYGG
Ga0184635_100568561	3300018072	Groundwater Sediment	RIEIWSRADDPIAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLRLTATGGIMVFLATLFIVVAYGG
Ga0184632_100163953	3300018075	Groundwater Sediment	MAVGIIGEEKPRYFSIVRWGDAELTLAQIKRRLWIEKWLLRLTATGGILGFLVVTLAARAYGG
Ga0184609_104555122	3300018076	Groundwater Sediment	WSRTDDPMAVGVIGERKPRYFSIVRWGDAELTVAQAKRKLWVEKWLLRLTATGGIMVFLATVFAVLAYGWIMVGFGFTFN
Ga0066655_101008891	3300018431	Grasslands Soil	MAVGVIGEENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGILGFLVVTLAARAYGG
Ga0066667_118020611	3300018433	Grasslands Soil	MAVGVIGEENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLSATGGIGFLTVMLAAMHYGG
Ga0137408_11960821	3300019789	Vadose Zone Soil	EKPRYFSIVRWGDAELTLAQVKRRLWIEKWLLRLTATGGILGFLVVTLAARAYGG
Ga0210404_106231903	3300021088	Soil	DPMAVGVIGKAKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLRLTATGGIIFFLVALFVLVAHGG
Ga0126371_126909901	3300021560	Tropical Forest Soil	EENPRYFSIVRWGDAELTLAQVKRRLWVEKWLLPLTATSVAMVFLVARFIAVAYGG
Ga0222622_106161651	3300022756	Groundwater Sediment	GVIGEEKPRYFSIVRWGDAKLRLAQVKRRLRVEKWLLRLTAIGGIMIFLVTMFVVVAHGG
Ga0207646_107177251	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RVDDPMAVGVIGEEKPRYFSIVRWGDAKLTLAQVKRKLRVEKWLLLLSETGGIVVFLVTIFAIVAYGWITIGLGFAFN
Ga0207646_112790812	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	WSRTDDPMAVGVIGEEKPRYFSIVRWGDAKLTLAQVKTRLRVEKWLLRLIAPGGITVLLAALFIVVAYGG
Ga0209761_13489142	3300026313	Grasslands Soil	MAVGVIGEEKPRYFSIVRWGDAELTLAQVKRRLWVEKWLLLLTATGGIGFLTVMLAAMPYGG
Ga0209470_12646572	3300026324	Soil	MAVGVIGEENPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLLLTATGGIGFLTVMLAAMPYGG
Ga0209846_10139615	3300027277	Groundwater Sand	ADPMAVGIIGEEKPRYFSIVRWGDAELTLAQVKRRLWIEKWLLRLTATGGILGFLVATLAARAYGG
Ga0209382_104664713	3300027909	Populus Rhizosphere	GVIGEENPRYFSIARWGDAKLTLAQVKRRLSVEKWLFWLTPAGGILSFLVATLAAAARGG
Ga0170824_1181024381	3300031231	Forest Soil	HTDDPMAVGIIGEENPRYFSIVRWGNAKLTLAQVKRRLWVEKWLLRLTATGGIMLFLVTLFIVVAYGG
Ga0307469_101798333	3300031720	Hardwood Forest Soil	MAVGVIGEENPRYFSIVRWGGADLTLEQAKKRLRVQKWLLWLTPTVGILSFLVAALAAAARGG
Ga0307469_105897521	3300031720	Hardwood Forest Soil	RSDDPMAVGVIGEEKPRYFSIVRWGDAKLRLAQVKRRLRVEKWLLRLTAIGGIMIFLVTLFVVVVNGG
Ga0306918_107468541	3300031744	Soil	ADDPMAVGVIGEENPRYFSIVRWGDAELTLEQAKERLRVEKWLFWLTASGGIWVFLITMFAAVAHGG
Ga0307473_106887171	3300031820	Hardwood Forest Soil	EKPRYFSIVRWGDAKLTLAQVKRKLRVEKWLLLLSETGGIVVFLVTIFAIVAYGWITIGLGFAFN
Ga0310913_112428841	3300031945	Soil	FDHIEIWSRADDPMAVGVIGEENPRYFSIVRWGDAELTLEQAKERLRVEKWLFWLTASGGIWVFLITMVAAVAHGG
Ga0307479_121269051	3300031962	Hardwood Forest Soil	ERIEIWSRADDPMVVGVIGGEKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLFPLTATGGIMVFLVARFIVVAYGG
Ga0307470_106292732	3300032174	Hardwood Forest Soil	RWGDAKLTLAQVKRRLWVEKWLLGLTATGGIMVLLAALFIVVAYGG
Ga0307471_1001020991	3300032180	Hardwood Forest Soil	IVRWGDAKLTLAQVKRKLRVEKWLLLLSETGGIVVFLVTIFAIVAYGWITIGLGFAFN
Ga0307471_1017155461	3300032180	Hardwood Forest Soil	FSIVRWGDAKLTLPQVKRRLRVEKWLLLLTALGGIGFFAVTLIALAFGG
Ga0307471_1020367852	3300032180	Hardwood Forest Soil	VDDPIAVGVIGKEKPRYFSIVRWGDAKLTLAQVKRRLRVEKWLLRLIPPAGITVLLVVLWITIGFGFTFN
Ga0307472_1027560732	3300032205	Hardwood Forest Soil	EKPRYFSIVRWGDAKLTLAQVKRRLWVEKWLLGLTATGGIMVLLAALFIVVAYGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072512

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences