NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F072532

Metagenome Family F072532

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072532
Family Type Metagenome
Number of Sequences 121
Average Sequence Length 84 residues
Representative Sequence VLPLLVVLWRLGPRYRPWAAFSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAMLGFAGNIVLVLLLTHFAP
Number of Associated Samples 111
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.35 %
% of genes from short scaffolds (< 2000 bps) 94.21 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.562 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.008 % of family members)
Environment Ontology (ENVO) Unclassified
(24.793 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.760 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 62.50%    β-sheet: 0.00%    Coil/Unstructured: 37.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF01370Epimerase 51.24
PF11706zf-CGNR 15.70
PF03631Virul_fac_BrkB 6.61
PF00330Aconitase 6.61
PF16363GDP_Man_Dehyd 2.48
PF00160Pro_isomerase 1.65
PF010733Beta_HSD 0.83
PF13542HTH_Tnp_ISL3 0.83
PF05572Peptidase_M43 0.83
PF00694Aconitase_C 0.83
PF00528BPD_transp_1 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 6.61
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 1.65

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.56 %
UnclassifiedrootN/A7.44 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003659|JGI25404J52841_10024694All Organisms → cellular organisms → Bacteria1295Open in IMG/M
3300003990|Ga0055455_10263120All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300004081|Ga0063454_100272601All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300004081|Ga0063454_102105690All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300004153|Ga0063455_100030313All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300005166|Ga0066674_10364222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria677Open in IMG/M
3300005186|Ga0066676_10554525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria779Open in IMG/M
3300005186|Ga0066676_11003062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria555Open in IMG/M
3300005187|Ga0066675_10626824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria808Open in IMG/M
3300005187|Ga0066675_10708870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria757Open in IMG/M
3300005328|Ga0070676_10260689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1161Open in IMG/M
3300005355|Ga0070671_100330144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1300Open in IMG/M
3300005440|Ga0070705_100026180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3172Open in IMG/M
3300005440|Ga0070705_101280944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria607Open in IMG/M
3300005451|Ga0066681_10579862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria692Open in IMG/M
3300005466|Ga0070685_10062972All Organisms → cellular organisms → Bacteria2176Open in IMG/M
3300005526|Ga0073909_10163776All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300005539|Ga0068853_102328826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300005718|Ga0068866_11051237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria581Open in IMG/M
3300005844|Ga0068862_100849589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria894Open in IMG/M
3300005985|Ga0081539_10484273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300006028|Ga0070717_10212036All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300006046|Ga0066652_101458763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria637Open in IMG/M
3300006046|Ga0066652_101995632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria517Open in IMG/M
3300006178|Ga0075367_10087708All Organisms → cellular organisms → Bacteria1890Open in IMG/M
3300006954|Ga0079219_10041421All Organisms → cellular organisms → Bacteria1914Open in IMG/M
3300006954|Ga0079219_10453797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi876Open in IMG/M
3300007076|Ga0075435_100369268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1231Open in IMG/M
3300009093|Ga0105240_11413263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria731Open in IMG/M
3300009098|Ga0105245_11278938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria782Open in IMG/M
3300009137|Ga0066709_102175514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria765Open in IMG/M
3300009137|Ga0066709_103593577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300009137|Ga0066709_104259453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria521Open in IMG/M
3300009148|Ga0105243_10343570All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300009162|Ga0075423_10839882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria972Open in IMG/M
3300009551|Ga0105238_11900459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria628Open in IMG/M
3300009840|Ga0126313_10052649All Organisms → cellular organisms → Bacteria2876Open in IMG/M
3300010041|Ga0126312_10997354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria613Open in IMG/M
3300010042|Ga0126314_11043177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria608Open in IMG/M
3300010320|Ga0134109_10484798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300010326|Ga0134065_10478194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300010359|Ga0126376_10461031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1164Open in IMG/M
3300010396|Ga0134126_11269110Not Available817Open in IMG/M
3300010403|Ga0134123_11208011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium787Open in IMG/M
3300011003|Ga0138514_100012767All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300012200|Ga0137382_11014533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria595Open in IMG/M
3300012208|Ga0137376_10554305All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300012350|Ga0137372_11069242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria557Open in IMG/M
3300012512|Ga0157327_1083338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria518Open in IMG/M
3300012882|Ga0157304_1060918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria606Open in IMG/M
3300012912|Ga0157306_10011558All Organisms → cellular organisms → Bacteria1735Open in IMG/M
3300012938|Ga0162651_100087097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300012948|Ga0126375_11401046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria592Open in IMG/M
3300012951|Ga0164300_11009813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria536Open in IMG/M
3300012960|Ga0164301_11222361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria605Open in IMG/M
3300012988|Ga0164306_11595632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300013102|Ga0157371_11558331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria516Open in IMG/M
3300013308|Ga0157375_10357914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1625Open in IMG/M
3300014166|Ga0134079_10262137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria752Open in IMG/M
3300014745|Ga0157377_11197837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria588Open in IMG/M
3300015372|Ga0132256_102029142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium681Open in IMG/M
3300015373|Ga0132257_102063133Not Available736Open in IMG/M
3300015374|Ga0132255_100260806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2480Open in IMG/M
3300017657|Ga0134074_1313799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria573Open in IMG/M
3300017792|Ga0163161_11989107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria517Open in IMG/M
3300018028|Ga0184608_10127617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1083Open in IMG/M
3300018051|Ga0184620_10071000All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300018061|Ga0184619_10331831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria695Open in IMG/M
3300018066|Ga0184617_1159963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria663Open in IMG/M
3300018072|Ga0184635_10211994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria771Open in IMG/M
3300019361|Ga0173482_10177913Not Available853Open in IMG/M
3300019867|Ga0193704_1047891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria840Open in IMG/M
3300020015|Ga0193734_1023020Not Available1175Open in IMG/M
3300021445|Ga0182009_10062052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1617Open in IMG/M
3300022694|Ga0222623_10252204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria681Open in IMG/M
3300022883|Ga0247786_1038774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria944Open in IMG/M
3300023064|Ga0247801_1005358All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300023263|Ga0247800_1024580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria998Open in IMG/M
3300024347|Ga0179591_1163379All Organisms → cellular organisms → Bacteria3396Open in IMG/M
3300025900|Ga0207710_10742866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300025927|Ga0207687_11012279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria713Open in IMG/M
3300025935|Ga0207709_11817163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria507Open in IMG/M
3300025936|Ga0207670_11660391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300025937|Ga0207669_11082550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria676Open in IMG/M
3300025941|Ga0207711_11775272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria560Open in IMG/M
3300025944|Ga0207661_10248286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1581Open in IMG/M
3300025960|Ga0207651_10381041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1195Open in IMG/M
3300025972|Ga0207668_10032218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3461Open in IMG/M
3300026023|Ga0207677_10393655Not Available1173Open in IMG/M
3300026116|Ga0207674_10754420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria939Open in IMG/M
3300026300|Ga0209027_1191603All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria663Open in IMG/M
3300026316|Ga0209155_1049300All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1643Open in IMG/M
3300026547|Ga0209156_10204554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria940Open in IMG/M
3300026547|Ga0209156_10241386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria843Open in IMG/M
3300027907|Ga0207428_11271942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300028065|Ga0247685_1049080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria524Open in IMG/M
3300028072|Ga0247675_1015187All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300028146|Ga0247682_1017892All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300028592|Ga0247822_10199314All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300028704|Ga0307321_1073824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria669Open in IMG/M
3300028710|Ga0307322_10035385All Organisms → cellular organisms → Bacteria1192Open in IMG/M
3300028711|Ga0307293_10090033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria971Open in IMG/M
3300028720|Ga0307317_10275422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria568Open in IMG/M
3300028722|Ga0307319_10236480Not Available600Open in IMG/M
3300028768|Ga0307280_10161458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium778Open in IMG/M
3300028771|Ga0307320_10085361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1190Open in IMG/M
3300028787|Ga0307323_10035411All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300028791|Ga0307290_10043154All Organisms → cellular organisms → Bacteria1619Open in IMG/M
3300028791|Ga0307290_10207171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria719Open in IMG/M
3300028819|Ga0307296_10327850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria835Open in IMG/M
3300028872|Ga0307314_10181422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria624Open in IMG/M
3300028881|Ga0307277_10021589All Organisms → cellular organisms → Bacteria2524Open in IMG/M
3300028885|Ga0307304_10197604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria859Open in IMG/M
3300031226|Ga0307497_10476587Not Available611Open in IMG/M
3300032174|Ga0307470_10876563Not Available703Open in IMG/M
3300032397|Ga0315287_10796756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1111Open in IMG/M
3300032516|Ga0315273_11601834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria795Open in IMG/M
3300033433|Ga0326726_11493177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria658Open in IMG/M
3300033550|Ga0247829_11580048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria541Open in IMG/M
3300033551|Ga0247830_10335522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1165Open in IMG/M
3300034819|Ga0373958_0103509Not Available670Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.26%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.13%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.31%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.31%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.48%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.48%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.65%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.65%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.65%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.65%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.65%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.65%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.65%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.83%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.83%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003659Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012512Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510Host-AssociatedOpen in IMG/M
3300012882Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012938Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300023064Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6EnvironmentalOpen in IMG/M
3300023263Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028065Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26EnvironmentalOpen in IMG/M
3300028072Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16EnvironmentalOpen in IMG/M
3300028146Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028704Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25404J52841_1002469413300003659Tabebuia Heterophylla RhizosphereRYHPWAAYSTLVVALLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLVLVLLLTRFAP*
Ga0055455_1026312023300003990Natural And Restored WetlandsLVVLWRLGPRYRPWAAYSTVVVALLLLSGTIQSFGRQSLYAFPIFWAIADGPRWLRWPPLAVLGFAGNLALVLLLTHFAP*
Ga0063454_10027260123300004081SoilWAAYSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVLGFAANIALVLLLTHFAP*
Ga0063454_10210569013300004081SoilDSARAALVLPLLVVLWRLGPRYRPWAAYSTVVVALLLFSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVLGFAGNLALVLLLTHFAP*
Ga0063455_10003031333300004153SoilRAALVLPLLVVLWRLGPRYRPWAAFATAVTGLLLLSGTIQSFGRQSLYAFPIFWAIADGPRWLRYPPFAVLGFASNLALVLLLTHFAP*
Ga0066674_1036422213300005166SoilWRLGPRYRPWAAYATVVVAALIGSGLMQSFGRQSLYAFPIFWAIGEGPAWLRSKPLLALGFAANLGLALLLTRFAP*
Ga0066676_1055452513300005186SoilVLWRMGSRYRPWALFAAVVVAELLGSGLMHSFGRQSLFAFPIFWAIGEGPAWLRKRPLAALGFAANLALALLLTRFAP*
Ga0066676_1100306213300005186SoilVVLWRMGERYRPWAAFATVVVALLLGSGLMQSFGRQSLYAFPIFWALGEGPAWLRRPPLAVLGFAANLGIALLLTRFAP*
Ga0066675_1062682423300005187SoilQSLQGFVDSARCALVLPLLVVLWRLGPRYRPWALYATVVVAALLGSGLMQSFGRQSLFAFPIFWALGEGPTWLRRPPLAVLGFAANLALALLLTRFAP*
Ga0066675_1070887023300005187SoilVVLWRLGPRYRPWAAYATVVVAALVGSGLMQSFGRQSLYAFPIFWAIGEGPAWLRSRPLLALGFAANLGLALLLTRFAP*
Ga0070676_1026068913300005328Miscanthus RhizosphereLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP*
Ga0070671_10033014423300005355Switchgrass RhizosphereATRSLEGFVDSARAALVLPLLVVLWRLGGRYRPWAAFATVVVASLLVSGTMQSFGRQSLFAFPIFWAIADGPRWLRSPVLAVAGFAGNVALVLLLTRFAP*
Ga0070705_10002618013300005440Corn, Switchgrass And Miscanthus RhizosphereLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP*
Ga0070705_10128094413300005440Corn, Switchgrass And Miscanthus RhizosphereAATQSLQGFVDSARAALVLPLLVVLWRLGPRYRPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPVAALGFVANLGLALLLTRYAP*
Ga0066681_1057986213300005451SoilLQGFVDSARCVLVLPLLVVLWRMGERYRPWAAFATVVVALLLGSGLMQSFGRQSLYAFPIFWALGEGPAWLRRPPLAVLGFAANLGIALLLTRFAP*
Ga0070685_1006297213300005466Switchgrass RhizospherePRYRPWAAYATVVVAVLLLSGTVESFGRQSLFAFPIFWAIADGPGWLRWPPLAVAGFAGNLALAVLLTHFAP*
Ga0073909_1016377623300005526Surface SoilATKSLQGFVDSARAALVLPLLVVLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVLGFAGNITLVLLLTHFAP*
Ga0068853_10232882623300005539Corn RhizosphereTRSLEGFVDSARAALVLPLLVVLWRLGGRYRPWAAFATVVVASLLVSGTMQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVVGFAGNLALALLLTHFAP*
Ga0068866_1105123713300005718Miscanthus RhizosphereLVVLWRLGPRYRPWAAYSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVVGFAGNLALALLLTHFAP*
Ga0068862_10084958923300005844Switchgrass RhizosphereLVALLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP*
Ga0081539_1048427323300005985Tabebuia Heterophylla RhizosphereKSLSGFVHSARAALVLPLLVLLWRLGPRYRPWAAFATTVTFVLLLSGTIQSFGRQSLFAFPIFWAIADGPPWLRSPPLAVLGFAANIGLVLLLTHFAP*
Ga0070717_1021203613300006028Corn, Switchgrass And Miscanthus RhizosphereRYRPWATFSTIVVALLIFSGTIQSFGRQSLFAFPIFWAVADGPRWLRAPPLAVLGFAGNIVLALLLTHFAP*
Ga0066652_10145876313300006046SoilPLLFVLWRLGPRYRPWAAFATAVVALLLGSGLMKSFGRQSLYAFPIFWAIGEGPAWLRRRELAALGFAANLGLALLLTRFAP*
Ga0066652_10199563223300006046SoilWRLGPRYRPWAAFSTAVVVLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAALGFAGNIVLVLLLTHFAP*
Ga0075367_1008770833300006178Populus EndosphereSLQGFVDSARAALVLPLLVVLWRLGPRYHPWAAYSTVVVVLLVLSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLALVLLLTRFAP*
Ga0079219_1004142113300006954Agricultural SoilRAALVLPLLVVLWRLGERYRPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVVGFAGNLALALLLTHFAP*
Ga0079219_1045379723300006954Agricultural SoilVLPLLVVLWRMGPRYRPWTFFAGAVVVALLASGLMHSFGRQSLYAFPIFWALGEGPAWLRKPPLAALGFAANLGLALLITYFAP*
Ga0075435_10036926813300007076Populus RhizosphereGFVDSVRAALVLPLLVILWRLGSRYRPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLALLGFAANLGLALMLTRFAP*
Ga0105240_1141326323300009093Corn RhizosphereFVDSARAALVLPLLVVLWRLGPRYHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP*
Ga0105245_1127893823300009098Miscanthus RhizosphereGFVDSARAALVLPLLVVLWRLGPRYRPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPVAALGFVANLGLALLLTRYAP*
Ga0066709_10217551423300009137Grasslands SoilLVLPLLVVLWRMGERYRPWAAFATVVVAFLLGSGLMQSFGRQSLYAFPIFWALGEGPAWLRRPPLAALGFAANLGIALLLTRFAP*
Ga0066709_10359357713300009137Grasslands SoilARCVLVLPLLVVLWRMGSRYRPWALFAAVVVAELLGSGLMHSFGRQSLFAFPIFWAIGEGPAWLRKPPLAALGFAANLALALLLTRFAP*
Ga0066709_10425945323300009137Grasslands SoilRLGPRYRPWALYATVVVAALLGSGLMQSFGRQSLFAFPIFWALGEGPAWLRRPPLAVLGFGMNLVLVLLLTRFAP*
Ga0105243_1034357023300009148Miscanthus RhizosphereYRPWAAFSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIANGPRWLRSPPLAALGFAGNIALVLLLTHFAP*
Ga0075423_1083988213300009162Populus RhizosphereCVLVLPLLVVLWRMGPRYRPWTLFTGVVVAALLSSGLMHSFGRQSLYAFPIFWAIGEGPSWLRKPPLLALGFAANLGLALLITRFAP*
Ga0105238_1190045913300009551Corn RhizosphereATRSLEGFADSARAALVLPLLVVLWRLGPRYRPWAAYSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVVGFAGNLALALLLTHFAP*
Ga0126313_1005264943300009840Serpentine SoilLLVVLWRLGSRYRPWAAYATVVVVLLILSGTIQSFGRQSLFAFPIFWAIADGPRVLRSPVLAALGFAANLALLLLLTRFAP*
Ga0126312_1099735413300010041Serpentine SoilLLVLLWRLGPRYRPWAAFATVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRLLRSPLLAGLGFAANLALVLLLTRFAP*
Ga0126314_1104317723300010042Serpentine SoilVLPLLVVLWRLGPLYRPWAAFATVVVGLLLFSGTMQSFGRQSLFAFPIFWAIAEGPRWLRYPPLAVLGFAANLGLVLLLTRFAP*
Ga0134109_1048479823300010320Grasslands SoilHGLVDAARCALVLPLLVVLWRLGPRYRPWAAYATVVVAALIGSGLMQSFGRQSLYAFPIFWALGEGPAWLRRPPLAVLGFAANLGIALLLTRFAP*
Ga0134065_1047819423300010326Grasslands SoilHGFVDGVRCALVVPLLAVLWRMGPRYRPWAAYGTVVVAALLGSGLMQSFGRQSLYAFPIFWAIGEGPSWLRSRPLLALGFAANLGLALLLTRFAP*
Ga0126376_1046103113300010359Tropical Forest SoilSADGSSLAVTAGDLVVWRLGERYRPWAAFATAVVALLMLSGTIQSFGRQSLFAFPVFWAIADGPRWLRSPFLAVAGFAGNVVLVLLLTHFAP*
Ga0134126_1126911023300010396Terrestrial SoilALLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPQLAVLGFSGNIVLVLLLTHFAP*
Ga0134123_1120801123300010403Terrestrial SoilARAALVLPLLVVLWRLGPRYRPWAAYSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVVGFAGNLALALLLTHFAP*
Ga0138514_10001276713300011003SoilVDSARCAIVLPLLVVLWRLGPRFRPWALYATVVVAALLGSGLMQSFGRQSLFAFPVFWSIGEGPAWLRRPALAVLGFAANLVLALLLTRFAP*
Ga0137382_1101453323300012200Vadose Zone SoilYRPWALFAAVVVAELLGSGLMHSFGRQSLFAFPIFWAIGEGPAWLRKRPLAALGLAANLALALLITRFAP*
Ga0137376_1055430523300012208Vadose Zone SoilRMGARYRPWALFAAVVVAELLGSGLMHSFGRQSLFAFPIFWAIGEGPAWLRRPPLAVLGFAANLALALLITRFAP*
Ga0137372_1106924213300012350Vadose Zone SoilIIPLLVVLWRLGPRYRPWAAFATAVVVLLLLSGTMQSFGRQSLFAFPVFWAIAEGPRWLRCPPLAALGFAANLGIALLFTRFAP*
Ga0157327_108333813300012512Arabidopsis RhizosphereSLEGFVDSARAALVLPLLVVLWRLGPRYRPWAAYATAVVALLLLSGTIQSFGRQSLFAFPIFWAVADGPRVFRSPVLAALGFGANLALMLLLTRFAP*
Ga0157304_106091823300012882SoilDSARAALVLPLLVVLWRLGPRYHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLALVLLLTRFAP*
Ga0157306_1001155833300012912SoilVLWRLGPRYHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLALVLLLTRFAP*
Ga0162651_10008709713300012938SoilPWAAFATAVVALLLLSGTMQSFSRQSLFAFPIFWAIADGPRWLRYPPVAALGFVANLGLALLLTRYAP*
Ga0126375_1140104623300012948Tropical Forest SoilAALVLPLLVVLWRLGPRYRPWAAYSTLVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLTLVLLLTRFAP*
Ga0164300_1100981313300012951SoilPLLVVLWRLGPRYRPWAAFSTVVVALLLLSGTIQSFGRQSLFAVTIFWAIADGPRWLRWPPLAVLGFAGNIALVLLLTHFAP*
Ga0164301_1122236123300012960SoilATRSLEGFVDSARAALVLPLLVLLWKLGPRYRPWAAYSTVVVALLLFSGTIQSFGRQSLFAFPIFWAVADGPRWLRSPPLAVLGFAGNIVLVLLLTHFAP*
Ga0164306_1159563223300012988SoilGFVDSARAALVLPLLVVLWRLGPRYRPWAAFSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVLGFAGNIALVLLLTHFAP*
Ga0157371_1155833113300013102Corn RhizosphereLVVLWRLGPRYRPWAAYSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVVGFASNLALALLLTHFAP*
Ga0157375_1035791433300013308Miscanthus RhizosphereAALVLPLLVLLWKLGPRYRPWAAFSTIVVALLIFSGTIQSFGRQSLFAFPIFWAVADGPRWLRAPPLAVLGFAGNIVLALLLTHFAP*
Ga0134079_1026213723300014166Grasslands SoilDSARCVLILPLLVVLWRMGERYRPWAAFATVVVALLLGSGLMQSFGRQSLYAFPIFWALGEGPAWLRRPPLAVLGFAANLGIALLLTRFAP*
Ga0157377_1119783713300014745Miscanthus RhizospherePRYHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRMLRSPVLAGLGFAANLALVLLLTRFAP*
Ga0132256_10202914223300015372Arabidopsis RhizosphereAAFSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVVGFAGNLALALLLTHFAP*
Ga0132257_10206313313300015373Arabidopsis RhizosphereLGPRYRPWAAYATAVVALLLLSGTIQSFGRQSLFAFPIFWAVADGPRVFRSPVLAAFGFAANLALVLLLTRFAP*
Ga0132255_10026080613300015374Arabidopsis RhizosphereLGPRYHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLALVLLLTRFAP*
Ga0134074_131379913300017657Grasslands SoilLVVLWRLGPRYRPWAAFATAVVALLLGSGLMKSFGRQSLYAFPIFWAIGEGPAWLRRRELAALGFAANLGLALLLTRFAP
Ga0163161_1198910723300017792Switchgrass RhizosphereLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP
Ga0184608_1012761723300018028Groundwater SedimentLVVLWRLGPRYRPWAAFATVVAGLLLLSGTIQSFGRQSLFAFPVFWAIADGPRWLRYPPLAVLGFAANIGLVLLLTRFAP
Ga0184620_1007100013300018051Groundwater SedimentDSARAALVLPLLVVLWRLGPLYRPWAAFATVVVGLLLVSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLAALGLVANLGLALLLTRYAP
Ga0184619_1033183123300018061Groundwater SedimentPLLVVLWRLGARYRPWAAFATVVAGLLLLSGTIQSFGRQSLFAFPVFWAIADGPRWLRYPPLAALGFAANLGLVLLLTRFAP
Ga0184617_115996323300018066Groundwater SedimentPWAGFATVVGGLLLFSGTMQSFGRQSLFAFPIFWAIAEGPRWLRYPPLAVLGFAANLGLVLLLTRFAP
Ga0184635_1021199423300018072Groundwater SedimentRLGPRYRPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPVAALGFVANLGLALLLTRYAP
Ga0173482_1017791323300019361SoilAAFSTVAVRLLLLSGTIKSFGRQSLFAFPIFWAIADGPRWLRWPPLAVLGFAGNIVLVLLLTHFAP
Ga0193704_104789123300019867SoilGLVDSARAALVLPLLVVLWRLGPRYRPWAAFATVVVASLLLSGTVQSFGRQSLFAFPIFWAIADGPRWLRYPQLAVLGFAGNLALVLLLTRFAP
Ga0193734_102302023300020015SoilFLPLLVLLWKLGPSYRPWAAFSTAVITLLLLSGTIQSFGRQSLFAFPIFWAVADGPRWLRSPPLAVLGFAGNIALVLLLTHFAP
Ga0182009_1006205213300021445SoilKSLQGFVDSARAALVLPLLVVLWRLGPRYRPWAAYATAVVVLLLLSGTIQSFGRQSLFAFPIFWAIADGPGWLRWPPLAVAGFAGNLALAVLLTHFAP
Ga0222623_1025220423300022694Groundwater SedimentLGPLYRPWAAFATVVVGLLLVSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLAALGLVANLGLALLLTRYAP
Ga0247786_103877423300022883SoilLVLPLLVVLWRLGPRYHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLALVLLLTRFAP
Ga0247801_100535813300023064SoilHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLALVLLLTRFAP
Ga0247800_102458023300023263SoilDSARAALVLPLLVVLWRLGPRYHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLALVLLLTRFAP
Ga0179591_116337913300024347Vadose Zone SoilVLPLLVVLWRLGPRYRPWAAFSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAMLGFAGNIVLVLLLTHFAP
Ga0207710_1074286623300025900Switchgrass RhizosphereWRLGPRYRPWAAYATVVVAVLLLSGTVESFGRQSLFAFPIFWAIADGPGWLRWPPLAVAGFAGNLALAVLLTHFAP
Ga0207687_1101227913300025927Miscanthus RhizosphereFVDSARAALVLPLVALLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP
Ga0207709_1181716313300025935Miscanthus RhizosphereALVLPLIALLWRLGPRYRPWAAFSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAALGFAGNIVLVLLLTHFAP
Ga0207670_1166039123300025936Switchgrass RhizosphereRYRPWAAYATVVVAVLLLSGTVESFGRQSLFAFPIFWAIADGPRWLRYPPVAALGFVANLGLALLLTRYAP
Ga0207669_1108255023300025937Miscanthus RhizosphereTKSLQGFVDSARAALVLPLVALLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP
Ga0207711_1177527223300025941Switchgrass RhizosphereSARAALVLPLVALLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP
Ga0207661_1024828633300025944Corn RhizosphereRAALVLPLLVLLWKFGPRYRPWAAFSTVVVGLLLFSGTIQSFGRQSLFAFPIFWAVADGPRWLRSPPLAVLGFAGNIVLVLLLTHFAP
Ga0207651_1038104113300025960Switchgrass RhizosphereLVLPLLVLLWKLGPRYRPWAAFSTIVVALLIFSGTIQSFGRQSLFAFPIFWAVADGPRWLRAPPLAVLGFAGNIVLALLLTHFAP
Ga0207668_1003221813300025972Switchgrass RhizosphereQGFVDSARAALVLPLLVVLWRLGPRYRPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPVAALGFVANLGLALLLTRYAP
Ga0207677_1039365523300026023Miscanthus RhizosphereVLPLVALLWRLGPRYRPWAAFSTVVVGLLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRSPPLAVLGFSGNIVLVLLLTHFAP
Ga0207674_1075442023300026116Corn RhizosphereATRSLEGFVDSARAALVLPLLVLLWKLGPRYRPWAAFSTIVVALLIFSGTIQSFGRQSLFAFPIFWAVADGPRWLRAPPQAVLGFAGNIVLALLLTHFAP
Ga0209027_119160323300026300Grasslands SoilLGARYRPWAAYATVVAAALIGSGLMQSFGRQSLYAFPIFWAIGEGPGWLRSRPLLALGFAANLGLALLLTRFAP
Ga0209155_104930023300026316SoilVPPEPLVARLLCVLVLPLLVVLWRMGERYRPWAGFATVVVALLLGSGLMQSFGRQSLYAFPIFWAIGEGPSWLRSRPLLALGFAANLGLALLLTRFAP
Ga0209156_1020455423300026547SoilLPLLVVLWRMGERYRPWAAFATVVVALLLGSGLMQSFGRQSLYAFPIFWALGEGPAWLRRPPLAVLGFAANLGIALLLTRFAP
Ga0209156_1024138613300026547SoilQSLQGFVDSARCALVLPLLVVLWRLGPRYRPWALYATVVVAALLGSGLMQSFGRQSLFAFPIFWALGEGPTWLRRPPLAVLGFAANLALALLLTRFAP
Ga0207428_1127194213300027907Populus RhizospherePWAAFATAVVALLLVSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLAVLGFAANLGLALMLTRFAP
Ga0247685_104908023300028065SoilMGHRYRPWAVFATVVIATLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRSPFLAVAGFAGNVVLVLLLTHFAP
Ga0247675_101518713300028072SoilLLWRMGDRYRPWAAFATVVIATLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRSPFLAVAGFAGNVVLVLLLTHFAP
Ga0247682_101789223300028146SoilRMGHRYRPWAVFATVVIATLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRSPFLAVAGFAGNVVLVLLLTHFAP
Ga0247822_1019931413300028592SoilAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPVAALGFVANLGLALLLTRYAP
Ga0307321_107382423300028704SoilEGLVDSARAALVLPLLVVLWRLGPRYRPWAAFATVVVASLLLSGTVQSFGRQSLFAFPIFWAIADGPRWLRYPQLAVLGFAGNLALVLLLTRFAP
Ga0307322_1003538513300028710SoilRYRPWAAFATVVVASLLLSGTVQSFGRQSLFAFPIFWAIADGPRWLRYPQLAVLGFAGNLALVLLLTRFAP
Ga0307293_1009003333300028711SoilGFVDSARAALVLPLLVVLWRLGPRYRPWAAFANAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLAALGLVANLGLALLLTRYAP
Ga0307317_1027542213300028720SoilAAFASGVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLAALGLVANLGLALLLTRYAP
Ga0307319_1023648013300028722SoilLGPRYRPWAAFATVVVASLLLSGTVQSFGRQSLFAFPIFWAIADGPRWLRYPQLAVLGFAGNLALVLLLTRFAP
Ga0307280_1016145823300028768SoilVLLWKLGPRYRPWAAFSTVVVALLLLSGTMQSFGRQSLFAFPIFWAVADGPRWLRSPPLAVLGFAGNIALVLLLTHFAP
Ga0307320_1008536133300028771SoilGPRYRPWAAFATAVVGLLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLAALGFVANLGLALLLTRYAP
Ga0307323_1003541113300028787SoilALVLPLLVVLWRMGERYRPWAAFATVVVALLLASGLMQSFGRQSLYAFPIFWAIGEGPAWLRRPPLLALGFAANLAIALLLTRFAP
Ga0307290_1004315433300028791SoilLLVVLWRLGARYRPWAAFATAVAGLLLLSGTIQSFGRQSLFAFPVFWAIADGPRWLRYPPLAALGFAANIGLVLLLTRFAP
Ga0307290_1020717123300028791SoilWAAFATVVVASLLLSGTVQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVLGFAGNIVLVLLLTHFAP
Ga0307296_1032785013300028819SoilSVQGFVDSARAALILPLLVVLWRLGPRYRPWAAFATAVVGLLIVSGTMQSFGRQSLFAFPIFWAIAEGPRWLRYPPLAVLGFAANLGLVLLLTRFAP
Ga0307314_1018142223300028872SoilVDSARAALVLPLLVVLWRLGPRYRPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLAALGFVANLGLALLLTRYAP
Ga0307277_1002158933300028881SoilSARAALVLPLLVVLWRLGPRYRPWAAFATVVAVLLLLSGTIQSFGRQSLFAFPVFWAIADGPRWLRYPPLAVLGFAANIGLVLLLTRFAP
Ga0307304_1019760413300028885SoilARAALVLPLLVVLWRLGPLYRPWAAFATVVVGLLLVSGTMQSLGRQSLFAFPIFWAIAEGPRWLRYPPLAVLGFAANLGLVLLLTRFAP
Ga0307497_1047658713300031226SoilPRYRPWAAFSTVVVALLLLSGTIQSFGRQSLFAFPIFWAIADGPRWLRWPPLAVLGFAGNIVLVLLLTHFAP
Ga0307470_1087656323300032174Hardwood Forest SoilRPWTLFAGVVVAALLSSGLMHSFGRQSLYAFPIFWAIGEGPSWLRKPPLLALGFAANLGLALLITRFAP
Ga0315287_1079675623300032397SedimentLLSAVSLEMFLNSARAALVLPLLVVLWRLGPRYRPWAAFATAVIAVLLVSGQMQSFGRTSLFAFPIFWAIADGPRWLRYPPLAVLGFAANLGLTLLLTHYPP
Ga0315273_1160183413300032516SedimentLEMFLNSARAALVLPLLVVLWRLGPRYRPWAAFATAVIAVLLVSGQMQSFGRTSLFAFPIFWAIADGPRWLRYPPLAVLGFAANLGLTLLLTHYPP
Ga0326726_1149317713300033433Peat SoilPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPLAVLGFAANLGLALLLTRYAP
Ga0247829_1158004813300033550SoilPLLVVLWRLGPRYRPWAAFATAVVALLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRYPPVAALGFVANLGLALLLTRYAP
Ga0247830_1033552213300033551SoilATSSLQGFVDSARAALVLPLLVVLWRLGPRYHPWAAYSTVVVVLLILSGTIQSFGRQSLFAFPIFWAVADGPRVLRSPVLAGLGFAANLALVLLLTRFAP
Ga0373958_0103509_3_2483300034819Rhizosphere SoilLLVLLWRMGDRYRPWAAFATVVIATLLLSGTMQSFGRQSLFAFPIFWAIADGPRWLRSPFLAVAGFAGNVVLVLLLTHFAP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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