Metagenome Family F072597

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072597
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	111 residues
Representative Sequence	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQVVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRPAA
Number of Associated Samples	107
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.50 %
% of genes near scaffold ends (potentially truncated)	33.06 %
% of genes from short scaffolds (< 2000 bps)	69.42 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.554 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.917 % of family members)
Environment Ontology (ENVO)	Unclassified (28.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.322 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.2.1.0: automated matches	d7c6ca_	7c6c	0.67867
d.2.1.7: Chitosanase	d4olta_	4olt	0.66555
d.2.1.7: Chitosanase	d5hwaa_	5hwa	0.61731
d.2.1.9: NMB1012-like	d2nr7a1	2nr7	0.60334
d.2.1.3: Phage lysozyme	d1xjua1	1xju	0.58655

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13503	DUF4123	46.28
PF05488	PAAR_motif	14.88
PF10431	ClpB_D2-small	3.31
PF00498	FHA	2.48
PF05954	Phage_GPD	2.48
PF12385	Peptidase_C70	1.65
PF04965	GPW_gp25	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG4104	Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretion	Intracellular trafficking, secretion, and vesicular transport [U]	14.88
COG3500	Phage protein D	Mobilome: prophages, transposons [X]	2.48

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.55 %
Unclassified	root	N/A	26.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.55 %
Unclassified	root	N/A	26.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.55 %
Unclassified	root	N/A	26.45 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.72 %
Unclassified	root	N/A	26.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.13 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	26.45 %
Unclassified	root	N/A	26.45 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.40 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.45 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	20.66 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.40 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.13 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	2.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.45 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	20.66 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.13 %
Thiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae	2.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.45 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	20.66 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.40 %
Bryocella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella	2.48 %
Parasulfuritortus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Parasulfuritortus	2.48 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.45 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	20.66 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.40 %
Parasulfuritortus cantonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Parasulfuritortus → Parasulfuritortus cantonensis	2.48 %
Bryocella elongata	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	2.48 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	1.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100606086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2108	Open in IMG/M
3300000891\|JGI10214J12806_11258051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	776	Open in IMG/M
3300000891\|JGI10214J12806_11998179	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300001431\|F14TB_105804184	Not Available	619	Open in IMG/M
3300001686\|C688J18823_10963084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	541	Open in IMG/M
3300003319\|soilL2_10096336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2512	Open in IMG/M
3300004022\|Ga0055432_10070184	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300004114\|Ga0062593_101105311	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300004153\|Ga0063455_101348717	Not Available	547	Open in IMG/M
3300004479\|Ga0062595_100514294	Not Available	904	Open in IMG/M
3300004480\|Ga0062592_102244713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300004643\|Ga0062591_100205758	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300004808\|Ga0062381_10088382	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300005332\|Ga0066388_100040473	All Organisms → cellular organisms → Bacteria → Proteobacteria	4597	Open in IMG/M
3300005332\|Ga0066388_103213503	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300005345\|Ga0070692_10500245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	787	Open in IMG/M
3300005434\|Ga0070709_11428784	Not Available	560	Open in IMG/M
3300005439\|Ga0070711_101036981	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005444\|Ga0070694_100267624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1298	Open in IMG/M
3300005468\|Ga0070707_101991466	Not Available	548	Open in IMG/M
3300005518\|Ga0070699_100508783	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300005526\|Ga0073909_10007079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3335	Open in IMG/M
3300005539\|Ga0068853_102430822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Parasulfuritortus → Parasulfuritortus cantonensis	507	Open in IMG/M
3300005544\|Ga0070686_101952758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Parasulfuritortus → Parasulfuritortus cantonensis	501	Open in IMG/M
3300005545\|Ga0070695_100994598	Not Available	682	Open in IMG/M
3300005563\|Ga0068855_101207010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	786	Open in IMG/M
3300005615\|Ga0070702_100696465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	774	Open in IMG/M
3300005713\|Ga0066905_100002256	All Organisms → cellular organisms → Bacteria → Proteobacteria	7118	Open in IMG/M
3300005764\|Ga0066903_102258888	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300005841\|Ga0068863_100086899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2963	Open in IMG/M
3300006175\|Ga0070712_100849157	Not Available	785	Open in IMG/M
3300006755\|Ga0079222_10223864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1156	Open in IMG/M
3300006794\|Ga0066658_10319181	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300006844\|Ga0075428_100006784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12741	Open in IMG/M
3300006845\|Ga0075421_102343315	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300006846\|Ga0075430_100713980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	826	Open in IMG/M
3300006854\|Ga0075425_100775597	All Organisms → cellular organisms → Bacteria → Proteobacteria	1099	Open in IMG/M
3300006880\|Ga0075429_100703987	Not Available	885	Open in IMG/M
3300006914\|Ga0075436_100034128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3508	Open in IMG/M
3300007004\|Ga0079218_13906280	Not Available	507	Open in IMG/M
3300007255\|Ga0099791_10290983	Not Available	778	Open in IMG/M
3300009092\|Ga0105250_10031419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2132	Open in IMG/M
3300009137\|Ga0066709_100520729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1678	Open in IMG/M
3300009147\|Ga0114129_10009086	All Organisms → cellular organisms → Bacteria → Proteobacteria	14162	Open in IMG/M
3300009147\|Ga0114129_11697426	Not Available	771	Open in IMG/M
3300009156\|Ga0111538_10160412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2856	Open in IMG/M
3300009156\|Ga0111538_12155748	Not Available	700	Open in IMG/M
3300009162\|Ga0075423_10353313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1541	Open in IMG/M
3300009610\|Ga0105340_1019332	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	2661	Open in IMG/M
3300009678\|Ga0105252_10599127	Not Available	508	Open in IMG/M
3300010046\|Ga0126384_10391367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	1171	Open in IMG/M
3300010373\|Ga0134128_10254320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1971	Open in IMG/M
3300010373\|Ga0134128_10719504	Not Available	1108	Open in IMG/M
3300010397\|Ga0134124_12859478	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300010399\|Ga0134127_10046237	All Organisms → cellular organisms → Bacteria → Proteobacteria	3579	Open in IMG/M
3300010399\|Ga0134127_10786240	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300010399\|Ga0134127_12083928	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300010400\|Ga0134122_10018052	All Organisms → cellular organisms → Bacteria → Proteobacteria	5276	Open in IMG/M
3300010400\|Ga0134122_10470123	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M
3300011415\|Ga0137325_1100434	Not Available	657	Open in IMG/M
3300011430\|Ga0137423_1054977	Not Available	1184	Open in IMG/M
3300011434\|Ga0137464_1009843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2469	Open in IMG/M
3300012203\|Ga0137399_10132121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1974	Open in IMG/M
3300012208\|Ga0137376_11005835	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012212\|Ga0150985_106299747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1323	Open in IMG/M
3300012212\|Ga0150985_110151763	Not Available	804	Open in IMG/M
3300012285\|Ga0137370_10004971	All Organisms → cellular organisms → Bacteria	5986	Open in IMG/M
3300012469\|Ga0150984_109020943	All Organisms → cellular organisms → Bacteria	4410	Open in IMG/M
3300012511\|Ga0157332_1061978	Not Available	563	Open in IMG/M
3300012918\|Ga0137396_10018883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4386	Open in IMG/M
3300012922\|Ga0137394_10115213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2272	Open in IMG/M
3300012927\|Ga0137416_10030746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3572	Open in IMG/M
3300012930\|Ga0137407_11948529	Not Available	560	Open in IMG/M
3300012960\|Ga0164301_10071607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1881	Open in IMG/M
3300014968\|Ga0157379_10386866	Not Available	1284	Open in IMG/M
3300015241\|Ga0137418_10072602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3135	Open in IMG/M
3300015371\|Ga0132258_10995456	Not Available	2118	Open in IMG/M
3300017792\|Ga0163161_10851000	Not Available	770	Open in IMG/M
3300018083\|Ga0184628_10037486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2431	Open in IMG/M
3300018422\|Ga0190265_10081059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2971	Open in IMG/M
3300018422\|Ga0190265_11082966	Not Available	922	Open in IMG/M
3300024177\|Ga0247686_1001400	Not Available	2814	Open in IMG/M
3300024178\|Ga0247694_1030779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	602	Open in IMG/M
3300024224\|Ga0247673_1007413	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300025906\|Ga0207699_11100931	Not Available	588	Open in IMG/M
3300026041\|Ga0207639_10473809	Not Available	1140	Open in IMG/M
3300026088\|Ga0207641_10609825	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300026088\|Ga0207641_11055722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	810	Open in IMG/M
3300026550\|Ga0209474_10117641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1767	Open in IMG/M
3300027163\|Ga0209878_1013221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1144	Open in IMG/M
3300027778\|Ga0209464_10112481	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300027787\|Ga0209074_10102189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	971	Open in IMG/M
3300027880\|Ga0209481_10002351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7778	Open in IMG/M
3300027886\|Ga0209486_10991080	Not Available	564	Open in IMG/M
3300028146\|Ga0247682_1034764	Not Available	898	Open in IMG/M
3300028536\|Ga0137415_10291496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1436	Open in IMG/M
3300028587\|Ga0247828_10088450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1440	Open in IMG/M
3300028792\|Ga0307504_10071745	Not Available	1042	Open in IMG/M
3300031152\|Ga0307501_10007816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1673	Open in IMG/M
3300031184\|Ga0307499_10001336	All Organisms → cellular organisms → Bacteria → Proteobacteria	7326	Open in IMG/M
3300031226\|Ga0307497_10092752	Not Available	1161	Open in IMG/M
3300031547\|Ga0310887_10037358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2087	Open in IMG/M
3300031720\|Ga0307469_11266810	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031740\|Ga0307468_100005637	All Organisms → cellular organisms → Bacteria → Proteobacteria	4363	Open in IMG/M
3300031740\|Ga0307468_100884519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	772	Open in IMG/M
3300031820\|Ga0307473_10001026	All Organisms → cellular organisms → Bacteria → Proteobacteria	7089	Open in IMG/M
3300031858\|Ga0310892_11188200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Parasulfuritortus → Parasulfuritortus cantonensis	543	Open in IMG/M
3300031944\|Ga0310884_10606263	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300032013\|Ga0310906_10019564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2858	Open in IMG/M
3300032122\|Ga0310895_10551848	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	585	Open in IMG/M
3300032174\|Ga0307470_10382180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	989	Open in IMG/M
3300032180\|Ga0307471_100159876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Bryocella → Bryocella elongata	2184	Open in IMG/M
3300032205\|Ga0307472_100000195	All Organisms → cellular organisms → Bacteria → Proteobacteria	19414	Open in IMG/M
3300033550\|Ga0247829_10745940	Not Available	815	Open in IMG/M
3300033551\|Ga0247830_10024613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3634	Open in IMG/M
3300034115\|Ga0364945_0009717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2473	Open in IMG/M
3300034115\|Ga0364945_0239332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	559	Open in IMG/M
3300034150\|Ga0364933_154087	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300034817\|Ga0373948_0004112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2282	Open in IMG/M
3300034818\|Ga0373950_0033746	All Organisms → cellular organisms → Bacteria → Proteobacteria	957	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.86%
Host-Associated	Host-Associated	23.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.42%
Plants	Host-Associated → Plants	23.14%
Aquatic	Environmental → Aquatic	7.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.09%
Sediment	Environmental → Aquatic → Sediment	4.96%
Floodplain	Environmental → Terrestrial → Floodplain	2.48%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Marine	Environmental → Aquatic → Marine	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.24%
Loam	Environmental → Terrestrial → Soil → Loam	14.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.48%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.48%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.65%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006060862	3300000364	Soil	MILEDAQLTSFVPRLDAQFRARCMEALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHLVRSVEAILTEAALPEWQRVRLAGDYFRQFRQVAA*
JGI10214J12806_112580512	3300000891	Soil	MLVEDEQLAAFAPALDAQFRARCVETLAARGQWSEERVRRAVDTGLERAAALGLSEERSVLAYLVLATDIALAKPEEAVVRALEAILAEAALPEWQRVRLAGDYFRQMHRPPAP*
JGI10214J12806_119981792	3300000891	Soil	MFVEDEQLAAFAPGLDAQFRARCVEALGARGEWSEERVKRAVDTGLERAAALGLSEERSVLAYLLLAADIVLARPQEHTVHAVEAILREPSLAEWQRVRLAEDYFRQMHQPGS*
F14TB_1058041842	3300001431	Soil	MYVEDKQLAAFAPFLDGRFRARCIEALGKRGRWSEDRLERAVDTALQRARDLGLAEERSILAYILLASDVVVAKPDEHVLRAVEAILKEPGLPEWQRVCLAEDYFRQMHAPAP*
C688J18823_109630842	3300001686	Soil	MLVEDEQLAVFVPALDAQFRARCAAALSKRGQWSGERVGRAVDAALERAPALGLSEERSILAYLLFATDVALARPEEHTVRAIEAILREPSLPEWQ
soilL2_100963361	3300003319	Sugarcane Root And Bulk Soil	MIQIEDEQLAALAPRLDAQFRARCIDALRQRGNWSDSRIERAVDTGLERARELGLSEERSVLAYIVLATDIALAQPEEHIARSVEAILKEPRLAEWQRVRLAEDYFRQMHVPAQ*
Ga0055432_100701842	3300004022	Natural And Restored Wetlands	MILLEDEQLAAFAPGLDAQFRARCVAALRSRGKWPEERLERAVDTALERARSLGLSEERSVLAYLLLAADVALARPQEQLARSLEGILADGAFSEWQRVRLAQDYWRQMHEADR*
Ga0062593_1011053112	3300004114	Soil	MILIEDEQLALFAPRLDAQFRARCIAALRARGRWAETRLERAVDTALERAAALGLSEERSVLAYILLATDVALARPEEHLARAIEAILGDAAFPEWQRVRLADDYFRQMHPPSA*
Ga0063455_1013487171	3300004153	Soil	MFVEDEQLAAFAPGLDAQFRARCVEMLSARGQWSEERVKRAVDTGLERAAALGLSEERSVLAYLLLATDIALARPEDAVLRAVEAILREPGLPEWQRVRLAEDYFRQMHQPD*
Ga0062595_1005142942	3300004479	Soil	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQLVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRPAA*
Ga0062592_1022447132	3300004480	Soil	MILIEDEQLALFAPRLDAQFRARCIAALRARGRWAETRLERAVDTALERAAALGLSEERSVLAYILLATDVALARPEEHLARAIEAILGDAAFPEWQRVR
Ga0062591_1002057583	3300004643	Soil	MFVEDVQLAAFVPGLDAQFRARCVEALGARGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALPEWQRVRLAEDYFRQFHVARE*
Ga0062381_100883823	3300004808	Wetland Sediment	MLLVEDEQLAAFAPRLDAQFRARCLAALRLRGQWAEERLERAVDTALERARALGLAEERSVLAYLLLATDVALARPEEHIARAVEAILGDASFTEWQRVRLAEDYFRQMHRTGA*
Ga0066388_1000404739	3300005332	Tropical Forest Soil	APQLDAQFRSRCIAALRSRGQWQEERLERAVDTALERARALNLSEERSVLAYLLLATDVMLAQPEEHVARSVEAILGDTAFAEWQRVRLAEDYFRQMHRPAA*
Ga0066388_1032135032	3300005332	Tropical Forest Soil	MILEDAQLTSFAPRLDAQFRARCMEALRQRGRWPEDRLERAVDTALERARELGLAEERSVLAYIVLATDIVLARPEEQIVRSVESILAEAALPEWQRVRLAADYFRQFQQEAA*
Ga0070692_105002451	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQLVRAVEAILGDAGFAEWQRVRLAEDYFQQ
Ga0070709_114287841	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATNIVLARPEEQVVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRPAA*
Ga0070711_1010369812	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MILVEDEQLAVFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERAGGLGLSEERSVIAYLLLATEIVLARPEEHVARAVEAILGDAAFPEWQRVRLADDYFRQMHRPA
Ga0070694_1002676242	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VFVEDDQLAAFAPGLDAQFRARCVETLSARGQWSSERVQGAVDTGLERAAALGLSEERSVLAYLLLATDIALAKPEESVTRAVESILGDAAFPEGQRLRLAEDYFRQFHQPGA*
Ga0070707_1019914661	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPGLDAQFRARCVEALGARGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALPEWQRVRLAEDYFRQFHVARE*
Ga0070699_1005087833	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MFVEDVQLAAFVPGLDAQFRARCVEALGARGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALPEW
Ga0073909_100070794	3300005526	Surface Soil	MMLVADEQLAVFAPRLDALFRARCIAALRARGQWAEERLERAVDTGLERSRALGFAEERSVLAYLLLATDIALASPEEHIVRSVEAILGDAAFTEWQRLGLARDYFLQMHQPGE*
Ga0068853_1024308221	3300005539	Corn Rhizosphere	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQLVRAVEAILGDAGFAEWQRVRLAEDYFQQMHR
Ga0070686_1019527582	3300005544	Switchgrass Rhizosphere	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQLVRAVEAILGDAGFAEWQRVRLAEDY
Ga0070695_1009945982	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	QGGRGLTVFVEDDQLAAFAPGLDAQFRARCVETLSARGQWSSERVQRAVDTGLERAAALRLSEERSVLAYLLLATDIALAKPEESVTRAVESILGDAAFPEWQRLRLAQDYWLQFHPPDA
Ga0068855_1012070102	3300005563	Corn Rhizosphere	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQLVRAVEAILGDAGFAEWQRVRL
Ga0070702_1006964651	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQLVRAVEAILGDAGFAEW
Ga0066905_1000022565	3300005713	Tropical Forest Soil	VIQLEDEQLAAFAPGLDAQFRRRCLEVLRARGQWPEERLSRALDTGLERAAALGLSEERSVLAYLLLAIEVVAARPAEALLRSLESILADATLEEWQRVRLAHDYWLQMHPQA*
Ga0066903_1022588882	3300005764	Tropical Forest Soil	MIRVEDQQLAAFAPQLDAQFRARCLAALRARGKWAEERLERAVDTALERARALGLSEEEAVLGYILLATDVAQARPEEHVARAVEAILGDAAFAERSRVRLAEDYFRQLHPPSA*
Ga0068863_1000868993	3300005841	Switchgrass Rhizosphere	MIVEDAQLTSFVPRLDAQFRARCMQALRQRGRWSEDRLERAVDTALERARALGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEMALPEWQRVRLAGDYFRQFHEAAA*
Ga0070712_1008491571	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	APRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATNIVLARPEEQVVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRPAA*
Ga0079222_102238642	3300006755	Agricultural Soil	MIVVEDQQLAAFAPRLDAQFRARCIEALASRGKWPQDRLERAVDTALERAKTLGLSEERSVLAYMLLATDIVLARPEEPIVRAVEAILGEKRITEWQRVRLADDYFRQMHTARS*
Ga0066658_103191812	3300006794	Soil	MIVIEDEQLAAFAPSLDAQFRARCIEALGSRGQWPQDRLERAVDTALDRAKTLGLTEERSVLAYLLLATDIVLARPAEQIVRAVEAILGEKRITEWQRVRLAEDYFRQMREARS*
Ga0075428_1000067844	3300006844	Populus Rhizosphere	MIVEDAQLTSFVPRLDAQFRARCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQFQQVAA*
Ga0075421_1023433152	3300006845	Populus Rhizosphere	MIQIQDQQLAAFAPALDAQFRARCVEALRARGPWPEERVQRAVDTGLERARALGLSEERSVLAYLLLATDVALARPEEQIVRSVEAILRERALTEWQRVRLARDYWLQMREAAS*
Ga0075430_1007139801	3300006846	Populus Rhizosphere	MLIEDEQLAVFAPGLDAQFRARCVAALLARGQWSEERVARAVDTALERAAALGLSEERSVLAYLLLATDIVLAKPEEAVLRAVEAILAEAALPEWQRVRLAGDYFRQMHQAVS*
Ga0075425_1007755972	3300006854	Populus Rhizosphere	MFVEDEQLAAFAPGLDAQFRVRCAEALGVRGQWSEERVKRAVDTALERAPTLGLSEERSVFAYLLLATDIALAKPEEALVRGVEAILREPALPEWQRVRLARDYWLQMYQPPAP*
Ga0075429_1007039872	3300006880	Populus Rhizosphere	FAPALDAQFRARCVEALRARGPWPEERVQRAVDIGLERARALGLSEERSVLAYLLLATDVALARPEEQIVRSVEAILRERALTEWQRVRLARDYWLQMREAAS*
Ga0075436_1000341284	3300006914	Populus Rhizosphere	MIVVEDQQLAAFAPRLDAQFRARCIEALASRGKWPQDRLERAVDTALERAKTLGLSEERSVLAYMLLATDIVLARPEEPIVRAVEAILGEKRITEWQRVRLADD
Ga0079218_139062802	3300007004	Agricultural Soil	MFVEEEQFAAFAPGLDAQFRARCIAALRSRGKWPEERLGRAVDTALERARALGLSEERSVLGYLVLATDIVLAKPDEHIIRAVESILGDTALTEWQRMRLAEDYFRQMHQPAA*
Ga0099791_102909832	3300007255	Vadose Zone Soil	MIVVEDEQLAAFAPRLDAQFRTRCIEALASRGKWSQERLERAVDIALERARTLGLSEERSVLSYILLATDIVLARPDEHVVRAVEAILAERRITELQRVRFAEDYFRQIHEPRA*
Ga0105250_100314192	3300009092	Switchgrass Rhizosphere	MFVEDVQLAAFVPGLDAQFRARCVDALGARGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALPEWQRVRLAEDYFRQFHVARE*
Ga0066709_1005207292	3300009137	Grasslands Soil	MFVEDEQLAAFAPGLDAQFRPRSIETLSARGQWSEERVKRAVDTGLERARALGLSEERSVLAYLVLAADITLAKAEEAVVRAVEAILAEATLPEWQRVRLARDYFRQMHQPPAA*
Ga0114129_1000908610	3300009147	Populus Rhizosphere	MIVEDAQLTSFVPRLDAQFRARCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQLQQVAA*
Ga0114129_116974261	3300009147	Populus Rhizosphere	FRARCVEALRARGPWPEERVQRAVDTGLERARALGLSEERSVLAYLLLATDVALARPEEQIVRSVEAILRERALTEWQRVRLARDYWLQMREAAS*
Ga0111538_101604121	3300009156	Populus Rhizosphere	VFVEDEQLAAFAPALDAQFRLRCLEALRSRGKWAEERLRRAVDTGLERAAALGLSEERSVLAYLLLATGISLARPEEAVVRAIEAILREPALPEWQRVRLAADYFGQFREPRP*
Ga0111538_121557482	3300009156	Populus Rhizosphere	MHGSRRCPVARGSAQFRARCVEALGSRGKWQPDRLERAVDTALERARALGLSEERSVLSYILLATDIVLARPDQHVVRAAEAILAEKRITEWQRVRLAEDYFRQLHEPRA*
Ga0075423_103533133	3300009162	Populus Rhizosphere	MIVEDAQLTSFVPRLDAQFRARCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEMALPEWQRVRLAGDYFRQFHEAAA
Ga0105340_10193322	3300009610	Soil	MILVEDEQLAAFAPGLDAQFRARCVAALRSRGKWPEERLERAVDAALERARALGLSEERSVLAYLLLAADVARARPQEHVARAVEAILGDAAFPEWQRVRLAEDYWLQMHEPNP*
Ga0105252_105991271	3300009678	Soil	VIRLEDEQLAAFAPGLDAQFRSRCIEALGLRGRWPEDRLARAVDTALQRAVALGLSEERSVLAYILLATDVVLARPAEAVLRSLEAILADAALTEWQRVRLARDYFHQMDPGA*
Ga0126384_103913672	3300010046	Tropical Forest Soil	MILVEDEQLALFAPRLDAQFRARCIAALRARGQWAETRLERAVDTALERAAALGLSEERSVLAYILLATDIALARPEEHVAYAVEAILGEASFPEWQRVRLADDYFRQMHRAAE*
Ga0134128_102543201	3300010373	Terrestrial Soil	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQVVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRPAA*
Ga0134128_107195043	3300010373	Terrestrial Soil	VFVEDDQLAAFAPGLDAQFRARCVETLSARGQWSSERVQRAVDTGLERAAALRLSEERSVLAYLLLATDIALAKPEESVTRAVESILGDAAFPEGQRLRLAEDYFRQFHQPGA*
Ga0134124_128594782	3300010397	Terrestrial Soil	MILIEDGQLALFAPRLDAQFRARCIAALRARGRWAETRLERAVDTALERAAALGLSEERSVLAYILLATDVALARPEEHLARAIEAILGDAAFPEWQRVRLADDYFRQMHPPSA*
Ga0134127_100462371	3300010399	Terrestrial Soil	VIQLEDEQLAAFAPGLDAQFRSRCLGALRARGQWSEERLARALDAGLERAAALELSEERSVLAYLLLATEIVAARPAEAVVRSLEAILADSALTEWQRVRLARDYWLQMHPPA*
Ga0134127_107862401	3300010399	Terrestrial Soil	MLVDDEQLAAFAPGLDAQFRARCIAALRARGQWAEDRLERAVDAALERAGVLGLGEERSVLAYILLAAEIVLARPEDQITRSVEAILREPSLPEWQRVRLAEDYFRQMHPPAP*
Ga0134127_120839281	3300010399	Terrestrial Soil	VIQLEDEQIAAFAPGLDAQFRSRCLGVLRARGQWSEERLERAVDTALEGARALGLSEERSVLAYLLLATDVVRASPEEHIARSVEAILGDATYTQWQRVRLAED
Ga0134122_100180524	3300010400	Terrestrial Soil	MFVEDEQLAAFAPGLDAQFRARCVAALGARGQWSDERVRRAVHTGLERAAVLGLSEERSVLAYLLLATDVALAKPEEHLARAVEEILREASLPEWQRVRLAEDYFRQMHQPDS*
Ga0134122_104701233	3300010400	Terrestrial Soil	VFVEDDQLAAFAPGLDAQFRARCVETLSARGQWSSERVQRAVDTGLERAAALRLSEERSVLAYLLLATDIALAKPEESVTRAVESILGDAAFPEGQRLRLAEDYFRQFHQPG
Ga0137325_11004342	3300011415	Soil	FAPGLDAQFRSRCIEALGLRGRWPEDRLARAVDTALQRAVALGLSEERSVLAYILLATDVVLARPAEAVLRSLEAILADAALTEWQRVRLARDYFHQMDPGA*
Ga0137423_10549771	3300011430	Soil	EQLAAFAPGLDAQFRSRCIEALGLRGRWPEDRLARAVDTALQRAVALGLSEERSVLAYILLATDVVLARPAEAVLRSLEAILADAALTEWQRVRLARDYFHQMDPGA*
Ga0137464_10098434	3300011434	Soil	MILVEDEQLAAFAPGLDAQFRARCVAALRSRGKWPEERLERAVDAALERARALGLSEERSVLAYLLLATDVARARPQEHVARAVEAILGDAAFPEWQRVRLAEDYWLQMHEPNP*
Ga0137399_101321213	3300012203	Vadose Zone Soil	MMFVEDAQLAAFAPRLDAQFRARCIEALGSRGKWPQDQLERAVDTALERARTLGLSEERSVLAYLLLATDIVLARPDEHIVRAVEAILAEKRITEWQRVRLAEDYFRQMHEPRS*
Ga0137376_110058352	3300012208	Vadose Zone Soil	MLVEDEQLAAFAPGLDAQFRARCIGVLRSRGQWSEERLERAVDTGLERARALGLSEERSVLAYLLLATDIVLARPEEHIARAVEAILGYTALTEWQRVRLAEDYFRQIHEIDS*
Ga0150985_1062997472	3300012212	Avena Fatua Rhizosphere	MFVEDEQLAAFAPGLDAQFRARCVEMLSARGQWSEERVKRAVDTGLERAAALGLSEERSVLAYLLLATDIALARPEDAVLRAVEAILREPGLPEWQRVRLAEDYFRQMHQPG*
Ga0150985_1101517631	3300012212	Avena Fatua Rhizosphere	DAQFRARCVETLSARGQWSAERVQRAVDTRLERAAALGLSEERSVLGYILLAAEIALARPEQQVLRAVEAILGEPALPEWQRVQLAADYLRQFHPSGS*
Ga0137370_100049717	3300012285	Vadose Zone Soil	MLVEDEQLAAFAPGLDAQFRARCIGVLRSRGQWSEERLERAVDTGLERARALGLSEERSVLAYLLLATDIVLARPEEHVARAVEAILGYTALTEWQRVRLAEDYFRQIHEIDS*
Ga0150984_1090209435	3300012469	Avena Fatua Rhizosphere	GGAVVGAAQAGERLIMFVEDEQLAAFAPGLDAQFRARCVEMLSARGQWSEERVKRAVDTGLERAAALGLSEERSVLAYLLLATDIALARPEDAVLRAVEAILGEPGLPEWQRVRLAEDYFRQMHQPD*
Ga0157332_10619781	3300012511	Soil	LAAFAPRLDAQFRARCVEALGSRGKWQPDRLERAVDTALERARALGLSEERSVLSYILLATDIVLARPDQHVVRAAEAILAEKRITEWQRVRLAEDYFRQLHEPRA*
Ga0137396_100188834	3300012918	Vadose Zone Soil	MMFVEDAQLAAFAPRLDAQFRARCIEALGSRGKWPQDQLERAVDTALERARTLGLSEERSVLAYLLLATDIVLARADEHIVRAVEAILAEKRITEWQRVRLAEDYFRQMHEPRS*
Ga0137394_101152134	3300012922	Vadose Zone Soil	MIVEDAQLARFAPRLDAEFRARCIAALRSRGGWTEARVERGVDIALKRARELGLGEERSVLAYLILAVDVVAARPEEQLTRSVEAILREPRLPEWQRVRLAEDYFRQMHRPAE*
Ga0137416_100307463	3300012927	Vadose Zone Soil	MMFVEDAQLAAFAPRLDAQFRARCIEALGSRGKWPQDQLERAVDTALERARRLGLSEERSVLAYLLLATDIVLARADEHIVRAVEAILAEKRITEWQRVRLAEDYFRQMHEPRS*
Ga0137407_119485292	3300012930	Vadose Zone Soil	MFVEDEQLAAFAPRLDAQFRARCIEALRSRGRWPEDRLERAVDTALGRASALGLSEERSVLAYLLLATDIVLAKPEEHIARAVEAILRDAALTEWQRVRLAEDYFRQMHRSSP*
Ga0164301_100716074	3300012960	Soil	MMLVADEQRAVFAPRLDALFRARCIAALRARGQWAEERLERAVDTGLERSRALGFAEERSVLAYLLLATDIALASPEEHIVRSVEAILGDAAFTEWQRLGLARDYFLQMHQPGE*
Ga0157379_103868662	3300014968	Switchgrass Rhizosphere	MFVEDVQLAAFVPGLDAQFRARCVEALGAREQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALPEWQRVRLAEDYFRQFHVARE*
Ga0137418_100726023	3300015241	Vadose Zone Soil	MMFVEDAQLAAFAPRLDAQFRARCIEALGSRGKWPQDQLERAVDTALERARTLGLSEERSVLAYLLLATDIVLARADEHIVRAVEAILAEKRITEWQRVRLAEDYFRQMHEP
Ga0132258_109954561	3300015371	Arabidopsis Rhizosphere	AALGARMIVEDAQLTSFVPRLDAQFRTRCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQFQQVAA*
Ga0163161_108510001	3300017792	Switchgrass Rhizosphere	AQAGRRLAMFVEDVQLAAFVPGLDAQFRARCVEALGARGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALPEWQRVRLAEDYFRQFHVAR
Ga0184628_100374863	3300018083	Groundwater Sediment	MIVEDEQLAAFAPGLDAQFRARCIEALGARGEWSEERVKRAVDTGLERAAALGLSEERSVLAYLLLATDVALAKPEEHIARSVEAILREASLPEWQRVRLADDYFRQMHQPDS
Ga0190265_100810593	3300018422	Soil	MLIEDDQLAAFAPGLDAQFRARCIAALRSRGKWPAERLERAVDTAMERARALGLSEERSVLGYLLLATDIVLAKPEEHITRAVEAILGDTALTEWQRVRLAEDYFRQMHEPAA
Ga0190265_110829661	3300018422	Soil	EDEQLAAFAPGLDAQFRARCIAALRSRGQWPEERLERAVDTAMERGRALGLAEERSVLGYLLLATDIVLAKPDEHITRAVEAILSDTALTEWQRVRLAEDYFRQMHQGAA
Ga0247686_10014004	3300024177	Soil	MFVEDVQLAAFVPGLDAQFRARCVEALGARGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALPEWQRVRLAEDYFRQFHVARE
Ga0247694_10307791	3300024178	Soil	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQLVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRPAA
Ga0247673_10074133	3300024224	Soil	MILVEDEQLAVFAPRLDAQFRARCIAALRARGEWPEERLAPAVDTALERARALGLSEERSVLAFILLATEVALARPEEHVVRAIEAILGDAALLEWQRVRLAEDYFRQMHRPNV
Ga0207699_111009311	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATNIVLARPEEQVVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRPAA
Ga0207639_104738091	3300026041	Corn Rhizosphere	LVGAAQAGRRLAMFVEDVQLAAFVPGLDAQFRARCVEALGARGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALPEWQRVRLAEDYFRQFHVARE
Ga0207641_106098252	3300026088	Switchgrass Rhizosphere	MIVEDAQLTSFVPRLDAQFRARCMQALRQRGRWSEDRLERAVDTALERARALGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEMALPEWQRVRLAGDYFRQFHEAAA
Ga0207641_110557222	3300026088	Switchgrass Rhizosphere	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLAYILLATDIVLARPEEQLVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRP
Ga0207641_111242381	3300026088	Switchgrass Rhizosphere	MFVEDVQLAAFVPGLDAQFRARCVEALGARGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDITLARPEDAVVRAVEGILSEPALP
Ga0209474_101176413	3300026550	Soil	VIFIEDTQLAAFAPGLDAKFRARCIEALGSRGKWPQDRLERAADAALERAKTLGLSEERSVLSYMLLATDIVLARPDEHIVRAVEAILGEQRITEWQ
Ga0209878_10132213	3300027163	Groundwater Sand	MILVEDEQLAAFAPGLDAQFRARCVAALRSRGKWPEERLERAVDAALERARALGLSEERSVLAYLLLASDVARARPQEHVARAVEAILGDAAFPEWQRVRLAEDYWLQMHEPNP
Ga0209464_101124811	3300027778	Wetland Sediment	MLLVEDEQLAAFAPRLDAQFRARCLAALRLRGQWAEERLERAVDTALERARALGLAEERSVLAYLLLATDVALARPEEHIARAVEAILGDASFTEWQRVRLADDYFRQM
Ga0209074_101021892	3300027787	Agricultural Soil	MIVVEDQQLAAFAPRLDAQFRARCIEALASRGKWPQDRLERAVDTALERAKTLGLSEERSVLAYMLLATDIVLARPEEPIVRAVEAILGEKRITEWQRVRLADDYFRQMHTARS
Ga0209481_100023513	3300027880	Populus Rhizosphere	MIVEDAQLTSFVPRLDAQFRARCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQFQQVAA
Ga0209486_109910802	3300027886	Agricultural Soil	MILVEDEQLAAFAPGLDAQFRARCIAALRLRGKWPEERLERAVDTALERAGALGLSEERSVLAYLLLATDIVLARPEEHITRSVEAILREASLPEWQRVRLAEDYFRQMLPPAA
Ga0247682_10347642	3300028146	Soil	MIVVEDEQLAAFAPRLDAQFRARCIAALRARGRWAEERLERAVDTALERARALGLSEERSVLVYILLATDIVLARPEEQLVRAVEAILGDAGFAEWQRVRLAEDYFQQMHRPAA
Ga0137415_102914962	3300028536	Vadose Zone Soil	MMFVEDAQLAAFAPRLDAQFRARCIEALGSRGKWPQDQLERAVDTALERARTLGLSEERSVLAYLLLATDIVLARADEHIVRAVEAILAEKRITEWQRVRLAEDYFRQMHEPRS
Ga0247828_100884503	3300028587	Soil	MILLADEQLAAFAPKLDAQFRARCVAALRSRGKWPEERLERAVDTALERARSLGLSEERSVLAYLLLAADVALARPQEQLARALEGILADAAFTEWQRVRLAQDYWRQMREADR
Ga0307504_100717451	3300028792	Soil	GRRRPMIQLEDEQLSAFAPRLDAQFRGRCLEALRALGRWPEEQLARALDTGLERAGALGLSEERSVLAYLLLAVEIASARPEEAVVRSLEAILADAALSELQRVRLARDYFLQMHTAP
Ga0307501_100078163	3300031152	Soil	MFVEDEQLAAFAPWLDAQFRARCAEALGTRGQWSDERVRRAVDTGLQRAAALGLSEERSVLAYLLLATDIALARPEDAVVRAVEGILSEPALPEWQRVRLGEDYFRQFREARS
Ga0307499_100013364	3300031184	Soil	MFVEDEQLAAFAPGLDAQFRARCVEALGARGQWSDERVRRAVDAGLERAAALGLSEERSVLAYLLLATNVALAKPEEHIARSLEAILREASLPEWQRVRLAEDYFRQMHRPTP
Ga0307497_100927522	3300031226	Soil	MFVEDEQLAAFAPGLDAKFRARCVAALGARGQWSEERVKRAVDTGLERAAALGLSEERSILAYLLLATDITLARPEDAVVRAVEGILSEAALPEWQRACLAGDYFRQFHEARA
Ga0310887_100373582	3300031547	Soil	MIVEDAQLTSFVPRLDAQFRARCMQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQFQQVAA
Ga0307469_112668101	3300031720	Hardwood Forest Soil	MIVEDTQLTSFAPRLDAQFRGRCMEVLRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILTEAALPEWQRVRLAGDYFRQF
Ga0307468_1000056374	3300031740	Hardwood Forest Soil	MFVEDEQLAAFAPGLDAQFRARCVEALGARGQWSEERVRRAVDTGLERAAALGLSEERSVLAYLLLAADIALAKPEEHIARSVEEILREASLPEWQRVRLAEDYFRQFYAAGA
Ga0307468_1008845191	3300031740	Hardwood Forest Soil	MIVEDTQLTSFAPRLDAQFRGRCMEALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILTEAALPEWQRVRLAGDYFRQFQQVAA
Ga0307473_100010265	3300031820	Hardwood Forest Soil	MIVIEDQQLAAFAPRLDAQFRARCIEALGSRGQWSQDRLERAVDTALARARTLGLSEERSILAYLLLATDIVLARADEHIVRAVESILGEKRITEWQRVRLAEDYFRQMHEPRS
Ga0310892_111882002	3300031858	Soil	MIVEDAQLTSFVPRLDAQFRTRCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQFQQVAA
Ga0310884_106062631	3300031944	Soil	MIVEDAQLTSFVPRLDAQFRTRCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQ
Ga0310906_100195641	3300032013	Soil	MIVEDAQLTSFVPRLDAQFRTRCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQF
Ga0310895_105518482	3300032122	Soil	MMLVADEQLAVFAPRLDALFRARCIAALRARGQWAEERLERAVDTGLERSRALGFAEERSVLAYLLLATDIALASPEEHIVRSVEAILGDAAFTEWQRLGLARDYFLQMHQPGE
Ga0307470_103821802	3300032174	Hardwood Forest Soil	MILVEEEQFALFAPRLDAQFRSRCIAALRARGRWQEERLERAVDTALESARALNLSEERSVLAYLLLATDVILARPEEHVARAVEAILGDTAFSEWQRVRLAEDYFRQMSEPPP
Ga0307471_1001598764	3300032180	Hardwood Forest Soil	MILVEEEQFALFAPRLDAQFRSRCIAALRARGRWQEERLERAVDTALERARALNLSEERSVLAYLLLATDVILARPEEHVARAVEAILGDTAFSEWQRVRLAEDYFRQMSEPPP
Ga0307472_1000001952	3300032205	Hardwood Forest Soil	MIVIEDQQLAAFAPRLDAQFRARCIEALGSRGQWSQDRLERAVDTALARARTLGLSEERSILAYLLLATDIVLARPDEHIVRAVESILGEKRITEWQRVRLAEDYFRQMHEPRS
Ga0247829_107459401	3300033550	Soil	HDRRLMMLVADEQLAVFAPRLDALFRARCIAALRARGQWAEERLERAVDTGLERSRALGFAEERSVLAYLLLATDIALASPEEHIVRSVEAILGDAAFTEWQRLGLARDYFLQMHQPGE
Ga0247830_100246133	3300033551	Soil	MILLEDEQLAAFAPKLDAQFRARCVAALRSRGKWPEERLERAVDTALERARSLGLSEERSVLAYLLLAADVALARPQEQLARALEGILADAAFTEWQRVRLAQDYWRQMREADR
Ga0364945_0009717_1335_1679	3300034115	Sediment	MILVEDEQLAAFAPGLDAQFRARCVAALRSRGKWPEERLERAVDAALERARALGLSEERSVLAYHLLATDVARARPQEHVARAVEAILGDAAFPEWQRVRLAEDYWLQMHEPNP
Ga0364945_0239332_1_309	3300034115	Sediment	MIVEDEQLAAFAPGLDAQFRARCIEALGARGEWSEERVKRAVDTGLERAAALGLSEERSVLAYLLLATDVALAKPEEHIARSVEAILREASLPEWQRVRLADD
Ga0364933_154087_303_593	3300034150	Sediment	MIVEDEQLAAFAPGLDAQFRARCIEALGARGEWSEERVKRAVDTGLERAAALGLSEERSVLAYLLLATDVALAKPEEHIARSVEAILREASLPEWQR
Ga0373948_0004112_1343_1684	3300034817	Rhizosphere Soil	MIVEDAQLTSFVPRLDAQFRTRCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATASVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQFQQVAA
Ga0373950_0033746_186_527	3300034818	Rhizosphere Soil	MIVEDAQLTSFVPRLDAQFRTRCLQALRQRGRWSEDRLERAVDTALERARELGLAEERSVLAYILLATDIVLARPEEHIVRSVEAILAEVALPEWQRVRLAGDYFRQFHEAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072597

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences