NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F072613

Metagenome / Metatranscriptome Family F072613

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072613
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 74 residues
Representative Sequence MDPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKTLAKVLDFAEAYWRQNYPDT
Number of Associated Samples 102
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 55.37 %
% of genes near scaffold ends (potentially truncated) 20.66 %
% of genes from short scaffolds (< 2000 bps) 88.43 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (61.983 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(33.884 % of family members)
Environment Ontology (ENVO) Unclassified
(38.017 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.802 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.65%    β-sheet: 25.49%    Coil/Unstructured: 56.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00574CLP_protease 7.44
PF02559CarD_CdnL_TRCF 4.13
PF00072Response_reg 1.65
PF02635DrsE 1.65
PF08940DUF1918 1.65
PF05901Excalibur 1.65
PF13683rve_3 1.65
PF09851SHOCT 1.65
PF04545Sigma70_r4 1.65
PF01869BcrAD_BadFG 0.83
PF03062MBOAT 0.83
PF00174Oxidored_molyb 0.83
PF13302Acetyltransf_3 0.83
PF13744HTH_37 0.83
PF03861ANTAR 0.83
PF11964SpoIIAA-like 0.83
PF06745ATPase 0.83
PF04828GFA 0.83
PF00037Fer4 0.83
PF13508Acetyltransf_7 0.83
PF03193RsgA_GTPase 0.83
PF00487FA_desaturase 0.83
PF08734GYD 0.83
PF09471Peptidase_M64 0.83
PF00884Sulfatase 0.83
PF01545Cation_efflux 0.83
PF13185GAF_2 0.83
PF01814Hemerythrin 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 14.88
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 14.88
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 7.44
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.83
COG1162Ribosome biogenesis GTPase RsgATranslation, ribosomal structure and biogenesis [J] 0.83
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.83
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.83
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.83
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.83
COG3707Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domainsTranscription [K] 0.83
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.83
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.83
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.83
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.98 %
All OrganismsrootAll Organisms38.02 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908041|P3_CLC_ConsensusfromContig146326Not Available1021Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c2321444Not Available1763Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100432837Not Available570Open in IMG/M
3300001534|A15PFW1_10010032Not Available693Open in IMG/M
3300001538|A10PFW1_10231818Not Available849Open in IMG/M
3300002568|C688J35102_119682485Not Available748Open in IMG/M
3300004081|Ga0063454_100258954Not Available1050Open in IMG/M
3300004081|Ga0063454_100306207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium998Open in IMG/M
3300004081|Ga0063454_100678414Not Available771Open in IMG/M
3300004479|Ga0062595_100254998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_121141Open in IMG/M
3300004479|Ga0062595_100314138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1066Open in IMG/M
3300005179|Ga0066684_10083710All Organisms → cellular organisms → Bacteria1918Open in IMG/M
3300005187|Ga0066675_10653841Not Available790Open in IMG/M
3300005332|Ga0066388_103639671All Organisms → cellular organisms → Bacteria → Proteobacteria787Open in IMG/M
3300005533|Ga0070734_10028617Not Available3552Open in IMG/M
3300005764|Ga0066903_102502557All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300006046|Ga0066652_101122680Not Available745Open in IMG/M
3300006046|Ga0066652_101948800Not Available525Open in IMG/M
3300006050|Ga0075028_100621400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium643Open in IMG/M
3300006175|Ga0070712_100163490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1721Open in IMG/M
3300006796|Ga0066665_10190921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1583Open in IMG/M
3300006854|Ga0075425_102783430Not Available538Open in IMG/M
3300006904|Ga0075424_100670918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium1107Open in IMG/M
3300007821|Ga0104323_129811All Organisms → cellular organisms → Bacteria3017Open in IMG/M
3300009012|Ga0066710_101119703Not Available1218Open in IMG/M
3300009088|Ga0099830_10896335Not Available733Open in IMG/M
3300009090|Ga0099827_11492702Not Available588Open in IMG/M
3300009090|Ga0099827_11676123Not Available554Open in IMG/M
3300009094|Ga0111539_11764889Not Available718Open in IMG/M
3300009137|Ga0066709_101330185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1051Open in IMG/M
3300009137|Ga0066709_101484402Not Available979Open in IMG/M
3300009137|Ga0066709_102382700Not Available721Open in IMG/M
3300009147|Ga0114129_12518128All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300009400|Ga0116854_1014202Not Available535Open in IMG/M
3300010038|Ga0126315_10507505All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300010039|Ga0126309_10699791Not Available650Open in IMG/M
3300010044|Ga0126310_10162405Not Available1434Open in IMG/M
3300010147|Ga0126319_1052578Not Available582Open in IMG/M
3300010333|Ga0134080_10147010Not Available997Open in IMG/M
3300010333|Ga0134080_10279122Not Available744Open in IMG/M
3300010359|Ga0126376_11025898All Organisms → cellular organisms → Bacteria → Proteobacteria827Open in IMG/M
3300010366|Ga0126379_10242448All Organisms → cellular organisms → Bacteria1769Open in IMG/M
3300010937|Ga0137776_1451200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1756Open in IMG/M
3300011269|Ga0137392_11254082Not Available600Open in IMG/M
3300011270|Ga0137391_10782010Not Available788Open in IMG/M
3300011971|Ga0120175_1031888Not Available621Open in IMG/M
3300011987|Ga0120164_1000418All Organisms → cellular organisms → Bacteria18896Open in IMG/M
3300011997|Ga0120162_1043793Not Available1131Open in IMG/M
3300012003|Ga0120163_1115502Not Available579Open in IMG/M
3300012005|Ga0120161_1021252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2556Open in IMG/M
3300012010|Ga0120118_1115930Not Available647Open in IMG/M
3300012014|Ga0120159_1179298Not Available573Open in IMG/M
3300012096|Ga0137389_10858720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium779Open in IMG/M
3300012189|Ga0137388_10543938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1079Open in IMG/M
3300012201|Ga0137365_11256403Not Available527Open in IMG/M
3300012203|Ga0137399_10007413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales6277Open in IMG/M
3300012204|Ga0137374_10066951All Organisms → cellular organisms → Bacteria3561Open in IMG/M
3300012206|Ga0137380_11395640Not Available585Open in IMG/M
3300012208|Ga0137376_10301660Not Available1390Open in IMG/M
3300012208|Ga0137376_11183320Not Available653Open in IMG/M
3300012209|Ga0137379_10987913Not Available747Open in IMG/M
3300012209|Ga0137379_11554785Not Available561Open in IMG/M
3300012210|Ga0137378_10921270Not Available787Open in IMG/M
3300012211|Ga0137377_10380809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1348Open in IMG/M
3300012211|Ga0137377_11108812Not Available721Open in IMG/M
3300012212|Ga0150985_101021002Not Available506Open in IMG/M
3300012212|Ga0150985_109798302Not Available507Open in IMG/M
3300012350|Ga0137372_10033122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4721Open in IMG/M
3300012354|Ga0137366_10555076Not Available826Open in IMG/M
3300012354|Ga0137366_10659274All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium748Open in IMG/M
3300012356|Ga0137371_10327023All Organisms → cellular organisms → Bacteria → Terrabacteria group1193Open in IMG/M
3300012356|Ga0137371_10782653Not Available728Open in IMG/M
3300012357|Ga0137384_10282691All Organisms → cellular organisms → Bacteria → Terrabacteria group1381Open in IMG/M
3300012357|Ga0137384_11017163Not Available666Open in IMG/M
3300012358|Ga0137368_10088153All Organisms → cellular organisms → Bacteria2449Open in IMG/M
3300012359|Ga0137385_11185865Not Available625Open in IMG/M
3300012359|Ga0137385_11657335Not Available503Open in IMG/M
3300012362|Ga0137361_11325100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium644Open in IMG/M
3300012363|Ga0137390_10308665Not Available1564Open in IMG/M
3300012363|Ga0137390_11194277Not Available708Open in IMG/M
3300012685|Ga0137397_10045933All Organisms → cellular organisms → Bacteria3125Open in IMG/M
3300012918|Ga0137396_10075271Not Available2367Open in IMG/M
3300012922|Ga0137394_10240680All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300012923|Ga0137359_10055607All Organisms → cellular organisms → Bacteria3444Open in IMG/M
3300012927|Ga0137416_10442626Not Available1109Open in IMG/M
3300012930|Ga0137407_11614773Not Available617Open in IMG/M
3300012944|Ga0137410_10279071All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300012957|Ga0164303_10261761Not Available998Open in IMG/M
3300012961|Ga0164302_10631089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria782Open in IMG/M
3300012988|Ga0164306_11938540Not Available512Open in IMG/M
3300014157|Ga0134078_10220267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium783Open in IMG/M
3300014157|Ga0134078_10475898Not Available576Open in IMG/M
3300015054|Ga0137420_1199584Not Available559Open in IMG/M
3300015371|Ga0132258_10906165All Organisms → cellular organisms → Bacteria2226Open in IMG/M
3300015371|Ga0132258_12295543Not Available1353Open in IMG/M
3300015373|Ga0132257_103769642Not Available551Open in IMG/M
3300017654|Ga0134069_1150101Not Available778Open in IMG/M
3300017924|Ga0187820_1076574Not Available936Open in IMG/M
3300018027|Ga0184605_10019175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2724Open in IMG/M
3300018061|Ga0184619_10128182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1151Open in IMG/M
3300018429|Ga0190272_10943667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium816Open in IMG/M
3300018482|Ga0066669_10579869Not Available981Open in IMG/M
3300019888|Ga0193751_1168201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria768Open in IMG/M
3300021363|Ga0193699_10056156Not Available1532Open in IMG/M
3300025929|Ga0207664_11410505Not Available617Open in IMG/M
3300027587|Ga0209220_1190324Not Available522Open in IMG/M
3300027727|Ga0209328_10063743All Organisms → cellular organisms → Bacteria → Terrabacteria group1129Open in IMG/M
3300027826|Ga0209060_10097415Not Available1377Open in IMG/M
3300027882|Ga0209590_10302544Not Available1027Open in IMG/M
3300028536|Ga0137415_10154527All Organisms → cellular organisms → Bacteria2130Open in IMG/M
3300028793|Ga0307299_10268452Not Available641Open in IMG/M
3300029636|Ga0222749_10826145Not Available507Open in IMG/M
3300031544|Ga0318534_10808557Not Available527Open in IMG/M
3300031546|Ga0318538_10238225Not Available976Open in IMG/M
3300031573|Ga0310915_11255207Not Available511Open in IMG/M
3300031682|Ga0318560_10248945Not Available954Open in IMG/M
3300031751|Ga0318494_10467559Not Available734Open in IMG/M
3300031798|Ga0318523_10499927Not Available602Open in IMG/M
3300031819|Ga0318568_10339189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium935Open in IMG/M
3300032955|Ga0335076_10348087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1368Open in IMG/M
3300034090|Ga0326723_0313404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium705Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil33.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.44%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost7.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.13%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.13%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.31%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.31%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.48%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.48%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.65%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.65%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.65%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.65%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.83%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.83%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.83%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908041Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3EnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001534Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007821Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009400Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011971Permafrost microbial communities from Nunavut, Canada - A7_80cm_12MEnvironmentalOpen in IMG/M
3300011987Permafrost microbial communities from Nunavut, Canada - A20_80cm_0MEnvironmentalOpen in IMG/M
3300011997Permafrost microbial communities from Nunavut, Canada - A15_80cm_18MEnvironmentalOpen in IMG/M
3300012003Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25MEnvironmentalOpen in IMG/M
3300012005Permafrost microbial communities from Nunavut, Canada - A15_80cm_0MEnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P3_CLC_007234902124908041SoilMGPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT
ICChiseqgaiiDRAFT_232144433300000033SoilMEIPEQTRELADVTIRARESRPGFFEVNFAPTSPDTHLARRGFTIDTARGARGRNLTEVLEWAESHWRQSYPT*
INPhiseqgaiiFebDRAFT_10043283723300000364SoilMDPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKTLAKVLDFAEAYWRQNYPDT*
A15PFW1_1001003223300001534PermafrostMNTPEETRELPDVTIRARETSPGSFVASYHPTSPETHPARQGFSIDTKRGLRGKNLTKVLDFAEAYWRQNYPDT*
A10PFW1_1023181813300001538PermafrostMGPPEETRELPDVTIRAQETSPGFFIASYHPISPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
C688J35102_11968248513300002568SoilPAGWGRVAILGVEVPEETRELPDVTIRARETRPGFFEANFQPTSATHPARQGFTIDTRRGLRGKTLTKALDFAEAFWRQNYPDS*
Ga0063454_10025895423300004081SoilVEVPEETRELPDVTIRARETRPGFFEANFQPTSATHPARQGFTIDTRRGLRGKTLTKALDFAEAFWRQNYPDS*
Ga0063454_10030620713300004081SoilMDPREETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKQGLRGKTLAKVLDFAEAYWRQNYPDT*
Ga0063454_10067841413300004081SoilMHLTAAAWPSSTPAMDPPEETRQLPDVAIRAQETSPGLFVASYHPTSPEMHPARQGFSIDTNRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0062595_10025499823300004479SoilLPDSLQRMEIPEETRELEDVTIRVRENAPGSFEANFSPTSPTHMARQGFTVNTRQGAKGKSLAQVLDWAEVYWRQNYPDS*
Ga0062595_10031413823300004479SoilMRLTATAWPSSTPPMDPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKQGLRGKNLAKVLYFAEAYWRQNYPDT*
Ga0066684_1008371023300005179SoilMEIPEQTRGLNDVIIRAREVSPGRFEANFRPTSSTHPARQGFTVDTRRGARGKNLAQVLDWAEAYWRQNYPA*
Ga0066675_1065384113300005187SoilVDAAEETRELLDVTIQARETAAGRFEAIFRPTSPTHPARQGFTVDTRQGARGKTLAQVLDWAEGYWRQNYPT*
Ga0066388_10363967123300005332Tropical Forest SoilMRLTGTASPCSTPPMDPPEETRRLPDVTIRAQETSPGFFVASYYPTSPETHPARQGFSIDTKRGLRGKKLAEVLDFAEAFWRQNYPDM*
Ga0070734_1002861713300005533Surface SoilMEIPEESRELADVTIRVRETSPGFFEANFSPTSPTHMARQGFTVDTKLGAKGKSLGEVLDWAEGHWRQNYPS*
Ga0066903_10250255723300005764Tropical Forest SoilMRLTGTASPCSSPPMDPPEETRRLPDVTIRAQETSPGFFVASYYPTSPETHPARQGFSIDTKRGLRGKKLAEVLDFAEAFWRQNYPDM*
Ga0066652_10112268013300006046SoilMDPREETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKQGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0066652_10194880023300006046SoilMEVPEESREFKDVTIRAREVSPGRFEANFRPTSPTHPARQGFTIDTRQGARGKTLSQVLDWAEGYWRQNYPT*
Ga0075028_10062140013300006050WatershedsMEIPEATRELADVTIRARETSPGFFEVSFSPTSATHMARQGFTVDTRRGARGKTLPQVLEWAEGYWRQNYPAS*
Ga0070712_10016349023300006175Corn, Switchgrass And Miscanthus RhizosphereMEIPEETRELVDVTIRVRETSPSSFEANFSPISPTHMARQGFTVDTKRGAKGKTLPQVLDWAEGYWRQNYPAP*
Ga0066665_1019092123300006796SoilMEIPEETRELTDVTIRVRETSPGRFEAIFRPTSPTHPARQGFTVDTSRGARGKTLGQVLDWAEGYWRQKYPTQA*
Ga0075425_10278343013300006854Populus RhizosphereVEVPEETRELPDVTIRARETRPGFFEANFHPTSATHPARQGFTIDTRGGLRGKTLTKALDFAEAFWRQNYPDS*
Ga0075424_10067091813300006904Populus RhizosphereVEVPEETRELPDVTIRARETRPGFFEANFHPTSATHPARQGFTIDTRGGLRGKTLTKALDFAEAFWRQN
Ga0104323_12981113300007821SoilMDTPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLTKVLDFAEAYWRQNYPDM*
Ga0066710_10111970323300009012Grasslands SoilVEIPEETRELPDVTIRARETSPGVFEANFKPTDPLHLARQGFTIDTKRGLRGKNLTDVLDFAEAHWRQAYPTS
Ga0099830_1089633523300009088Vadose Zone SoilMDPPEETRELPDVTIRARETSPGFFIASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0099827_1149270213300009090Vadose Zone SoilVEIPEEIRELPDVTIRARETSPGFFEANFRPTSPTHPARQGFTIDTKQGLRGKNLTKVLDFAEAHWRQNYPDT*
Ga0099827_1167612313300009090Vadose Zone SoilMGPPEETRELPDVTIRAQETSPGFFVTRYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEGYWRQNYPDT*
Ga0111539_1176488923300009094Populus RhizosphereMGPPEETRELPDVTIRAQETSPGFFVASYHPTSPTHPARHGFSIDTKQGPRGKNLTKVLDFAEAYWRQNYPDT*
Ga0066709_10133018513300009137Grasslands SoilMLGASSNPGVEVPEETRELPDVTIRARETRPGFFEANFHPTSATHPARQGFTIDTKRGLRGKTLTKVLDFAEAFWRQNYPDT*
Ga0066709_10148440223300009137Grasslands SoilMDPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKTLAKVLDFAEAYWCQNYPDT*
Ga0066709_10238270013300009137Grasslands SoilMETPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFGIDTKRGLRGKTLAKVLDFAEAYWRQNYPDT*
Ga0114129_1251812823300009147Populus RhizosphereELEDVTIHARETAPGRFEAIFRPASPTHPARQGFTVDTSRGARGKTLGQVLDWAEGYWRQNYPA*
Ga0116854_101420213300009400SoilMEIPEATRELEDVTIRARETSPGFFEVSFTPTSATHMARQGFTVDTRRGARGKSLAQVLDWAEGYWRQNYPDS*
Ga0126315_1050750523300010038Serpentine SoilRRAALLALGPSLTAMLGASSNPGVEVPEQTRELPDVTIRARETRPGFFEANFHPTSATHPARHGFTLDTTRGLRGKTLTKVLDFAEAFWRQNYPDT*
Ga0126309_1069979113300010039Serpentine SoilMEIPEETRELKDVTIRVRETSPGSFEARFSPTSPTHMARQGFTVDTRRGARGKSLAQVLD
Ga0126310_1016240523300010044Serpentine SoilMEIPEETRELKDVTIRVRETSPGSFEARFSPTSPTHIARQGFTVDTRRGARGKSLAQVLDWAEGYWRQNYPAS*
Ga0126319_105257813300010147SoilMGPREETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0134080_1014701013300010333Grasslands SoilMEIPEETRELTDVTIRARETSPGRFEAIFSPTSPTHPARQGFTVDTSRGARGKTLAQVLDWAEGYWRQNYPLQPEE*
Ga0134080_1027912223300010333Grasslands SoilMDPREETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKQGLRGKNLTKVLDFAEAYWRQNYPDT*
Ga0126376_1102589823300010359Tropical Forest SoilMDPPEETRRLPDVTIRAQETSPGFFVASYYPTSPETHPARQGFSIDTKRGLRGKKLAEVLDFAEAFWRQNYPDM*
Ga0126379_1024244823300010366Tropical Forest SoilMDPPEESRRLPDVTIRAQETSPDFFVASYHPTSPETHPARQGFSIDTKRGLRGKKLAEVLDFAEAFWRQNYPDM*
Ga0137776_145120033300010937SedimentMDFPEEVRELVDVTIRVRETSTGFFEANFSPTSPTHMARQGFTVDTRRGAKGKTLTQVLDWAEGYWRQNYPT*
Ga0137392_1125408213300011269Vadose Zone SoilMDSPEETRELPDVTIRARETSPGFFVASYQPTSPETHPARQGFSIDTKRGLRGKSLAKVLDFAEAYWRQNYPDT*
Ga0137391_1078201013300011270Vadose Zone SoilMDPPEEIRELPDVTIRARETSPGFFVASYQPTSPETHPARQGFSIDTERGLRGKTLAKVLDFAEAYWRQNYPDT*
Ga0120175_103188813300011971PermafrostMGPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0120164_100041883300011987PermafrostMGPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEGYWRQNYPDT*
Ga0120162_104379333300011997PermafrostIRARETSPGSFVASYHPTSPETHPARQGFSIDTKRGLRGKNLTKVLDFAEAYWRQNYPDT
Ga0120163_111550213300012003PermafrostPEETRELPDVTIRARETSPGSFVASYHPTSPETHPARQGFSIDTKRGLRGKNLTKVLDFAEAYWRQNYPDT*
Ga0120161_102125243300012005PermafrostMDAPEETRELPDVTIRAQETSPGFFIASYHPISPETHPARQGFSIDTKRGLRGKNLAEAYWRQNYPDT*
Ga0120118_111593023300012010PermafrostMDPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0120159_117929813300012014PermafrostTIRAKEPSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0137389_1085872033300012096Vadose Zone SoilMDAPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKSLAKVLDFAEAYWRQNYPDT*
Ga0137388_1054393823300012189Vadose Zone SoilMDPPEETRELPDVTIRARETSPGFFIASYHPTSPETHPARQGFSIDTKRGLRGKSLAKVLDFAEAYWRQNYPDT*
Ga0137365_1125640313300012201Vadose Zone SoilRELLDVTIQARETAAGRFEAIFRPTSPTHPARQGFTVDTRQAARGKTLAQVLDWAEGYWRQNYPT*
Ga0137399_1000741383300012203Vadose Zone SoilMDAPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLGKVLDFAEAYWRQNYPDV*
Ga0137374_1006695123300012204Vadose Zone SoilMGPPEATRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDR*
Ga0137380_1139564013300012206Vadose Zone SoilMDPPEETRELPDVTIRAQETSPGFFVASYQPTSPDTHPARQGFSIDTKQGLRGKTLAKVLDFAEAYWRQNYPDT*
Ga0137376_1030166023300012208Vadose Zone SoilMEIPEETRELTDVTIRVRETSPGRFEANFSPTSPTHPARQGFTVDTSRGARGKTLAQVLDWAEGYWRQNYPLQPEE*
Ga0137376_1118332013300012208Vadose Zone SoilMEIPEESRELRDVTIRAQEVSPGRFEANFRPTSPTHPARHGFTVDTSRGARGKTLAQVLDWAEGYWRQNYPT*
Ga0137379_1098791323300012209Vadose Zone SoilMGPPEETRELPDVTIRAQETSPGFFVASYRPISPETHPARQGFSIDTRQGLRGKSLAKVLDFAEAYWRQNYPDT*
Ga0137379_1155478523300012209Vadose Zone SoilMQIPEQTRQLADVTIRARETRSGVFEVSFEPTSPDTHLSRQGFTIDTARGLRGHSLTEVLEWAELHWHQNYP
Ga0137378_1092127023300012210Vadose Zone SoilMETPEETRELKDVTIRARETSPGRFEANFRPTSPTHPARHGFTVDTRRGARGKTLAQVLDWAEGYWRQNYPA*
Ga0137377_1038080913300012211Vadose Zone SoilPEETRELPDVTIRAQESSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKTLAKVLDFAEAYWRQNYPDT*
Ga0137377_1110881223300012211Vadose Zone SoilWLLDDAQSPRCDNRHVDAAEETRELPDVTIQARETAAGRFEAIFRPTSPTHPARQGFTVDTRQGARGKTLAQVLDWAEGYWRQNYPT*
Ga0150985_10102100213300012212Avena Fatua RhizosphereVEVPEETRELPDVTIRARETRPGFFEANFQPTSATHPARQGFTIDTRRGLRGKTLTKALDFAEAFWRQNYPES*
Ga0150985_10979830223300012212Avena Fatua RhizosphereMDPPEETRQLPDVTIRAQETRPVFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0137372_1003312243300012350Vadose Zone SoilMDPPEEIREFADVTIRAQETSPGFFVASYRPTSPESHPARQGFSIDTKRGLRGKTLAKVLDFAEAYWRQNYPDR*
Ga0137366_1055507623300012354Vadose Zone SoilMETPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKTLAKVLDFAEAYWRQNYPDT*
Ga0137366_1065927423300012354Vadose Zone SoilMDPPKETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSLDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0137371_1032702333300012356Vadose Zone SoilMQTPEETRELKDVTIRARETSPGRFEANFRPTSPTHPARHGFTVDTRRGARGKTLAQVLDWAEGYWRQNYPA*
Ga0137371_1078265313300012356Vadose Zone SoilAERRQRRRHRLTAPLAAGSTPGVEIPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKTLAKVLDFAEAYWRQNYPDR*
Ga0137384_1028269123300012357Vadose Zone SoilMQTPEETRELKDVTIRARETSPGRFEANFRPTSPTHPARHGFTVDTRRGARGKTLAQVLDWAERYWRQNYPA*
Ga0137384_1101716313300012357Vadose Zone SoilMDPPEETRELPDVTIRARETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGQTLAKVLDFAEAYWRQNYPDT*
Ga0137368_1008815323300012358Vadose Zone SoilMGPPEATRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVVDFAEAYWRQNYPDR*
Ga0137385_1118586513300012359Vadose Zone SoilMDAPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0137385_1165733513300012359Vadose Zone SoilMDAPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSLDTRRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0137361_1132510013300012362Vadose Zone SoilPDVTIRAQETSPGFFIASYHPTSPETHPARQGFSIDTKRGLRGKSLAKVLDFAEAYWRQNYPDT*
Ga0137390_1030866513300012363Vadose Zone SoilVTIRARETSPGFFIASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0137390_1119427713300012363Vadose Zone SoilMDPPEEIRELPDVTIRARETSPGFFVASYQPTSPETHPARQGFSIDTERGLRGKTLAKVLDFAEA
Ga0137397_1004593343300012685Vadose Zone SoilMDVPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLGKVLDFAEAYWRQNYPDV*
Ga0137396_1007527113300012918Vadose Zone SoilMDVPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLGKVLDFAEAYWRQNYPDA*
Ga0137394_1024068023300012922Vadose Zone SoilMDAPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLGKVLDFAEAYWRQNYPDA*
Ga0137359_1005560773300012923Vadose Zone SoilMDPPEETRELPDVTIRAQETSPGFFIASYHPTSPETHPARQGFSIDTKRGLRGKSLAKVLDFAEAYWRQNYPDT*
Ga0137416_1044262613300012927Vadose Zone SoilMDVPEETRELPDVTIRAQETSPGFFVASYHPISPETHPARQGFSIDTKRGLRGKNLGKVLDFAEAYWRQNYPDV*
Ga0137407_1161477313300012930Vadose Zone SoilMDAPEETRELPDVTIRARETSPGFFVASYHPTSPETHPARQGFSLDTKRGLRGKTLAKVLDFAEAYWRQNYPDT*
Ga0137410_1027907123300012944Vadose Zone SoilMDAPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKTLGKVLDFAEAYWRQNYPDA*
Ga0164303_1026176113300012957SoilMDPPEEIRKLPDVTIRARETSPGFFVASYRPTSPETHPARQGFSIDTKRGLRGKTLTKVLDFAEAYWRQNYQDT*
Ga0164302_1063108923300012961SoilMEIPEETRELVDVTIRVRETSPGSFEANFSPISPTHMARQGFTVDTRQGAKGKTLPQVLDWAEGYWRQNYPAP*
Ga0164306_1193854023300012988SoilMDPPEEIRKLPDVTIRARETSPGFFVASYRPTSPETHPARQGFSIDTKRGLRGKTLTKVLDFAEAYWRQNYPDT*
Ga0134078_1022026723300014157Grasslands SoilMLRHGVRHESIAIEIPEETRELTDVTIRARETSPGRFEANFSPTSPTHPARQGFTVDTSRGARGKTLAQVLDWAEGYWRQNYPLQPEE*
Ga0134078_1047589823300014157Grasslands SoilLDPREETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT*
Ga0137420_119958413300015054Vadose Zone SoilMDVPEETPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLGKVLDFAEAYWRQNYPDV*
Ga0132258_1090616523300015371Arabidopsis RhizosphereVNPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARRGFSIDTKRGLRGKNLTKVLDFAEAYWRQNYPDT*
Ga0132258_1229554333300015371Arabidopsis RhizosphereMEIPEQTRELADATIRARETRPGFFEVNFAPTSPDTHLARQGFTIDTARGARGHNLTEVLEWAESHWRQNYPT*
Ga0132257_10376964213300015373Arabidopsis RhizosphereMEIPEQTRELADATIRARETRPGFFEVNFAPTSPDTHLARQGFTIDTRGGLRGKTLAKALDFAEAFWRQNYPDS*
Ga0134069_115010113300017654Grasslands SoilLTDVTIRARETSPGRFEANFSPTSPTHPARQGFTVDTSRGARGKTLAQVLDWAEGYWRQNYPAQP
Ga0187820_107657433300017924Freshwater SedimentMTDERSVSTPEDVRELDDVTIRVRETAPGFFEVNFSPTSPTHIARQGFSVDTRRGAKGKSLRQVLAWAEDYWRQNYPV
Ga0184605_1001917543300018027Groundwater SedimentLTAAAWPSSTPAMDPPEQTRELPDVTIRAQETSPGFFVASYQPTSPETHPARQGFSLDTKRGLRGKTLAKVLDFAEAYWRQNYPDT
Ga0184619_1012818223300018061Groundwater SedimentMDPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSLDTKRGLRGKTLAKVLDFAEAYWRQNYPDT
Ga0190272_1094366713300018429SoilLDIVARAAGASRSRLRRMRLTATAWPSSTPPMDPPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPDT
Ga0066669_1057986923300018482Grasslands SoilMLRHGVRHESIAMEIPEETRELTDVTIRARETSPGRFEANFSPTSPTHPARQGFTVDTSRGARGKTLAQVLDWAEGYWRQNYPLQPEE
Ga0193751_116820113300019888SoilMVPPEETRELPDVTIRAQETSPGFFIASYHPTSPETHPARQGFSIDTKRGLRGKSLAKVLDFAEAYWRQNYPDT
Ga0193699_1005615623300021363SoilMDPPEETRELPDVTIRAQETSPGFFIASYHPTSPETHPARQGFSIDTKRGLRGKSLAKVLDFAEAYWRQNYPDT
Ga0207664_1141050523300025929Agricultural SoilVEAPEETRELADVTIRVRETAPGSFEANFRPTSPTHMARQGFTVDTKRGAKGKSLAQVLDWAEGYWRQNYPAA
Ga0209220_119032413300027587Forest SoilMEIPEATRELEDVTIRARETSPGFFEVSFSPTSATHMARQGFTVDTRRGARGKSLAQVLEWADGYWRQNYP
Ga0209328_1006374323300027727Forest SoilMEIPEATRELEDVTIRARETSPGFFEVSFSPTSATHMARQGFTVDTRRGARGKSLAQVLEWADGYWRQNYPA
Ga0209060_1009741523300027826Surface SoilMEIPEESRELADVTIRVRETSPGFFEANFSPTSPTHMARQGFTVDTKLGAKGKSLGEVLDWAEGHWRQNYPS
Ga0209590_1030254423300027882Vadose Zone SoilMDPPEETRELPDVTIRAQETSPGFFIASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEGYWRQNYPDT
Ga0137415_1015452733300028536Vadose Zone SoilMDAPEETRELPDVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLGKVLDFAEAYWRQNYPDV
Ga0307299_1026845213300028793SoilVTIRAQETSPGFFVASYHPTSPETHPARQGFSIDTKRGLRGKNLAKVLDFAEAYWRQNYPET
Ga0222749_1082614513300029636SoilMEIPEATRELADVTIRARETSPGFFEVSFSPTSATHMARQGFTVDTRRGARGKTLPQVLEWAEGYWRQNYPAS
Ga0318534_1080855713300031544SoilMEIPEATRELVDVTIRVRETSPNFFEANFAPTSPTHMARQGFTVDTRRGAKGKSLAQVLEWAEGYWRQNYPA
Ga0318538_1023822523300031546SoilMEIPEATRELVDVTIRVRETSPNFFEANFAPTSPTHMARQGFTVDTRRGAKGKSLAQVLEWAEGYWRQNYPAS
Ga0310915_1125520713300031573SoilMEIPEATRELVDVTIRVRETSPNFFEANFAPTSPTHMARQGFTVDTRRGAKGKSLAQVLEWAEGYW
Ga0318560_1024894513300031682SoilMEIPEATRELVDVTIRVRETSPNFFEANFAPTSPTHMARQGFTVDTRRGAKGKSLAQVLEWAEGY
Ga0318494_1046755913300031751SoilMEIPEATRELVDVTIRVRETSPNFFEANFAPTSPTHMARQGFTVDTRRGAKGKSLAQVLEWAEGYWRQNY
Ga0318523_1049992713300031798SoilMEIPEATRELVDVTIRVRETSPNFFEANFAPTSPTHMARQGFTVDTRRGAKGKSLAQVLD
Ga0318568_1033918923300031819SoilMEIPEATRELVDVTIRVRETSPNFFEANFAPTSPTHMARQGFTVDTRRGAKGKSLAQVLDWAEGYWRQNYPAS
Ga0335076_1034808723300032955SoilMEAPEEIRELADVTIRVRETSPGFFEANFSPTSPTHMARQGFTVDTKLGAKGKSLGEVLDWAERHWRQNYPT
Ga0326723_0313404_233_4543300034090Peat SoilVELPEETRELVDVTIRVRETSPGSFEVNFSPISPTHMARQGFTIDTKRGAKGKNLAQVLGWAEGYWRQNYPAS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.