Metagenome / Metatranscriptome Family F072662

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072662
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	114 residues
Representative Sequence	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN
Number of Associated Samples	88
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.44 %
% of genes near scaffold ends (potentially truncated)	35.54 %
% of genes from short scaffolds (< 2000 bps)	88.43 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.983 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (39.669 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.942 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.21% β-sheet: 0.00% Coil/Unstructured: 33.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04679	DNA_ligase_A_C	9.92
PF02586	SRAP	4.96
PF13302	Acetyltransf_3	2.48
PF12680	SnoaL_2	1.65
PF01909	NTP_transf_2	1.65
PF01022	HTH_5	1.65
PF01068	DNA_ligase_A_M	1.65
PF00072	Response_reg	0.83
PF13847	Methyltransf_31	0.83
PF00140	Sigma70_r1_2	0.83
PF04542	Sigma70_r2	0.83
PF00375	SDF	0.83
PF13515	FUSC_2	0.83
PF00589	Phage_integrase	0.83
PF00144	Beta-lactamase	0.83
PF13414	TPR_11	0.83
PF01272	GreA_GreB	0.83
PF00239	Resolvase	0.83
PF00701	DHDPS	0.83
PF12762	DDE_Tnp_IS1595	0.83
PF04198	Sugar-bind	0.83
PF00069	Pkinase	0.83
PF13676	TIR_2	0.83
PF02018	CBM_4_9	0.83
PF13193	AMP-binding_C	0.83
PF09948	DUF2182	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	11.57
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	4.96
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.31
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.65
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.65
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.65
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.83
COG2390	DNA-binding transcriptional regulator LsrR, DeoR family	Transcription [K]	0.83
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
All Organisms	root	All Organisms	38.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
cellular organisms	root	All Organisms → cellular organisms	38.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.13 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.13 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.65 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.31 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	1.65 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	1.65 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.83 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.31 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.65 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	1.65 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.31 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.65 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	1.65 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.31 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.65 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	1.65 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.83 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	0.83 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.98 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.31 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.65 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	1.65 %
Streptomyces sp. DH1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. DH1	0.83 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	0.83 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102444924	Not Available	564	Open in IMG/M
3300001593\|JGI12635J15846_10294255	Not Available	1019	Open in IMG/M
3300001593\|JGI12635J15846_10639463	Not Available	616	Open in IMG/M
3300002245\|JGIcombinedJ26739_100252599	Not Available	1651	Open in IMG/M
3300002245\|JGIcombinedJ26739_100530894	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300003219\|JGI26341J46601_10008526	All Organisms → cellular organisms → Bacteria	3366	Open in IMG/M
3300003219\|JGI26341J46601_10047810	Not Available	1344	Open in IMG/M
3300003368\|JGI26340J50214_10006218	All Organisms → cellular organisms → Bacteria	3858	Open in IMG/M
3300004080\|Ga0062385_10723878	Not Available	644	Open in IMG/M
3300004092\|Ga0062389_101044379	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300004092\|Ga0062389_102624833	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300004092\|Ga0062389_103157926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	617	Open in IMG/M
3300004152\|Ga0062386_100319402	Not Available	1241	Open in IMG/M
3300004152\|Ga0062386_101768441	Not Available	516	Open in IMG/M
3300004635\|Ga0062388_102317528	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005338\|Ga0068868_102402293	Not Available	503	Open in IMG/M
3300005439\|Ga0070711_101873727	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300005548\|Ga0070665_100472706	Not Available	1264	Open in IMG/M
3300005712\|Ga0070764_10961995	Not Available	537	Open in IMG/M
3300006052\|Ga0075029_100533738	Not Available	778	Open in IMG/M
3300006059\|Ga0075017_101178159	Not Available	600	Open in IMG/M
3300006162\|Ga0075030_101616001	Not Available	507	Open in IMG/M
3300006173\|Ga0070716_100905460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	691	Open in IMG/M
3300006175\|Ga0070712_100077094	Not Available	2402	Open in IMG/M
3300006175\|Ga0070712_100160442	Not Available	1736	Open in IMG/M
3300006175\|Ga0070712_101106732	Not Available	688	Open in IMG/M
3300006176\|Ga0070765_101848427	Not Available	566	Open in IMG/M
3300006354\|Ga0075021_10370006	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300006893\|Ga0073928_10089014	All Organisms → cellular organisms → Bacteria	2621	Open in IMG/M
3300006893\|Ga0073928_10357621	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300006893\|Ga0073928_10557998	Not Available	814	Open in IMG/M
3300009176\|Ga0105242_13283555	Not Available	503	Open in IMG/M
3300009545\|Ga0105237_10989374	Not Available	848	Open in IMG/M
3300009553\|Ga0105249_13078211	Not Available	536	Open in IMG/M
3300010339\|Ga0074046_10034017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	3463	Open in IMG/M
3300010339\|Ga0074046_10119654	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300010339\|Ga0074046_10289233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1009	Open in IMG/M
3300010341\|Ga0074045_10256133	Not Available	1156	Open in IMG/M
3300010343\|Ga0074044_10090916	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300010343\|Ga0074044_10330687	Not Available	1001	Open in IMG/M
3300010343\|Ga0074044_10989564	Not Available	551	Open in IMG/M
3300010379\|Ga0136449_100988778	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300010379\|Ga0136449_101651719	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300010379\|Ga0136449_103776742	Not Available	570	Open in IMG/M
3300012361\|Ga0137360_11583681	Not Available	560	Open in IMG/M
3300012924\|Ga0137413_11847164	Not Available	500	Open in IMG/M
3300012957\|Ga0164303_10184037	Not Available	1141	Open in IMG/M
3300012986\|Ga0164304_11418949	Not Available	571	Open in IMG/M
3300012987\|Ga0164307_10566828	Not Available	870	Open in IMG/M
3300012989\|Ga0164305_11012607	Not Available	707	Open in IMG/M
3300012989\|Ga0164305_12219683	Not Available	505	Open in IMG/M
3300013296\|Ga0157374_11625657	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300013297\|Ga0157378_10095595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	2706	Open in IMG/M
3300013308\|Ga0157375_11904073	Not Available	706	Open in IMG/M
3300014969\|Ga0157376_12278423	Not Available	581	Open in IMG/M
3300020579\|Ga0210407_10316118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1220	Open in IMG/M
3300020580\|Ga0210403_10414770	Not Available	1099	Open in IMG/M
3300020581\|Ga0210399_11168143	Not Available	613	Open in IMG/M
3300020583\|Ga0210401_10081609	All Organisms → cellular organisms → Bacteria	3043	Open in IMG/M
3300021046\|Ga0215015_10812951	Not Available	576	Open in IMG/M
3300021046\|Ga0215015_10838117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. DH1	547	Open in IMG/M
3300021046\|Ga0215015_10861021	All Organisms → cellular organisms → Bacteria	3556	Open in IMG/M
3300021171\|Ga0210405_10111117	All Organisms → cellular organisms → Bacteria	2164	Open in IMG/M
3300021171\|Ga0210405_10161576	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300021171\|Ga0210405_10362415	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300021171\|Ga0210405_10503629	Not Available	949	Open in IMG/M
3300021171\|Ga0210405_10650327	Not Available	818	Open in IMG/M
3300021180\|Ga0210396_11344217	Not Available	593	Open in IMG/M
3300021181\|Ga0210388_10716010	Not Available	871	Open in IMG/M
3300021405\|Ga0210387_10612214	Not Available	967	Open in IMG/M
3300021405\|Ga0210387_10905984	Not Available	776	Open in IMG/M
3300021405\|Ga0210387_10935746	Not Available	761	Open in IMG/M
3300021407\|Ga0210383_10812087	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300021407\|Ga0210383_11479262	Not Available	562	Open in IMG/M
3300021420\|Ga0210394_10805827	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300021474\|Ga0210390_10034395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4138	Open in IMG/M
3300021478\|Ga0210402_11624557	Not Available	573	Open in IMG/M
3300021479\|Ga0210410_10171280	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300022557\|Ga0212123_10241630	Not Available	1303	Open in IMG/M
3300025898\|Ga0207692_10353313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	907	Open in IMG/M
3300025915\|Ga0207693_10324646	Not Available	1205	Open in IMG/M
3300025915\|Ga0207693_10444900	Not Available	1013	Open in IMG/M
3300025916\|Ga0207663_11716998	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300025939\|Ga0207665_11220897	Not Available	600	Open in IMG/M
3300026551\|Ga0209648_10142237	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300027109\|Ga0208603_1029628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	861	Open in IMG/M
3300027521\|Ga0209524_1056735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	824	Open in IMG/M
3300027562\|Ga0209735_1012714	Not Available	1651	Open in IMG/M
3300027583\|Ga0209527_1154689	Not Available	507	Open in IMG/M
3300027603\|Ga0209331_1124832	Not Available	620	Open in IMG/M
3300027629\|Ga0209422_1106403	Not Available	646	Open in IMG/M
3300027651\|Ga0209217_1125755	Not Available	720	Open in IMG/M
3300027660\|Ga0209736_1106889	Not Available	758	Open in IMG/M
3300027667\|Ga0209009_1121785	Not Available	662	Open in IMG/M
3300027667\|Ga0209009_1125401	Not Available	652	Open in IMG/M
3300027684\|Ga0209626_1129983	Not Available	661	Open in IMG/M
3300027698\|Ga0209446_1006134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	2945	Open in IMG/M
3300027727\|Ga0209328_10196475	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300027812\|Ga0209656_10027710	Not Available	3394	Open in IMG/M
3300027812\|Ga0209656_10064505	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300027812\|Ga0209656_10216992	Not Available	919	Open in IMG/M
3300027812\|Ga0209656_10233187	Not Available	878	Open in IMG/M
3300027824\|Ga0209040_10356432	Not Available	692	Open in IMG/M
3300027908\|Ga0209006_10543248	Not Available	965	Open in IMG/M
3300027908\|Ga0209006_10911276	Not Available	705	Open in IMG/M
3300028047\|Ga0209526_10183387	Not Available	1455	Open in IMG/M
3300028047\|Ga0209526_10262905	Not Available	1177	Open in IMG/M
3300028906\|Ga0308309_10413698	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300029636\|Ga0222749_10739842	Not Available	538	Open in IMG/M
3300029943\|Ga0311340_10615984	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300030503\|Ga0311370_11802758	Not Available	622	Open in IMG/M
3300031023\|Ga0073998_10059586	Not Available	728	Open in IMG/M
3300031231\|Ga0170824_114176443	Not Available	635	Open in IMG/M
3300031234\|Ga0302325_10544580	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300031236\|Ga0302324_101005234	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300031708\|Ga0310686_113973931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300031715\|Ga0307476_11199476	Not Available	556	Open in IMG/M
3300031718\|Ga0307474_11441791	Not Available	542	Open in IMG/M
3300031753\|Ga0307477_10425293	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031754\|Ga0307475_11543388	Not Available	509	Open in IMG/M
3300031962\|Ga0307479_10854214	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	884	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.56%
Host-Associated	Host-Associated	7.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.73%
Aquatic	Environmental → Aquatic	19.83%
Plants	Host-Associated → Plants	7.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.42%
Freshwater	Environmental → Aquatic → Freshwater	13.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.31%
Sediment	Environmental → Aquatic → Sediment	3.31%
Peat	Environmental → Terrestrial → Peat	3.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.36%
Loam	Environmental → Terrestrial → Soil → Loam	27.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.79%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.79%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	16.53%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	13.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.44%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	5.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.13%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.31%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1024449241	3300000955	Soil	ELEASKQSRLRAWNVLQKLRSVLSEAGNVAIPPPNQKTFDAEGEALEHALTKSFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQI*
JGI12635J15846_102942553	3300001593	Forest Soil	MSITLKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSELGSVAIPPPAQKTFDAEGEALEHVLRKSFRLRNDAIKSLCSSVRRFRDATIKDECKGDYPHALQALWKALDRAEDLIQN*
JGI12635J15846_106394631	3300001593	Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWNVLQRLRSVLSEAGNVAIPPLAHKTFDGEGEVLEDALTKSLRIRNEAIKSLCSSVRRFRDATIKEECKRDYPHALQALWKALDRAENLIQN*
JGIcombinedJ26739_1002525992	3300002245	Forest Soil	MEITPNAIQDLLDELEASKRSRLRAWNALQRLRLVLSKLGNISIPPPAQKTFDSEGEILEHALTKTFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN*
JGIcombinedJ26739_1005308942	3300002245	Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMLLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN*
JGI26341J46601_100085265	3300003219	Bog Forest Soil	MSITPRAIQDLLDELETSKQSRLRAWNVLQXLRLVLSELGNVAIPSPAQKTFDAEGEILEHALTKCFRARSDAIKNLCSAVRRFRDATLKESCKGDYPQALQAMLKALDRAEDLI
JGI26341J46601_100478102	3300003219	Bog Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWRVLQRLRMVLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN*
JGI26340J50214_100062183	3300003368	Bog Forest Soil	MSITPRAIQDLLDELETSKQSRLRAWNVLQRLRLVLSELGNVAIPSPAQKTFDAEGEILEHALTKCFRARSDAIKNLCSAVRRFRDATLKESCKGDYPQALQAMLKALDRAEDLI*
Ga0062385_107238782	3300004080	Bog Forest Soil	MSITPKAIQDLLEELEASKQSRLRAWSVLQRLRVVLSELGNVAIPAAKRKTFDAEGEILEHALTKCFRARNDAIKSLCSSVRRFRDATIKEKCKGDYPQALQAMFRAKTGR
Ga0062389_1010443791	3300004092	Bog Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWKVLQRLRLVLSETGNIAIPPPAQKTFDAEGEILEHALKKSLRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLTQS*
Ga0062389_1026248331	3300004092	Bog Forest Soil	MLGMAITPKAIQDLLDELESSKQSRVRAWNVLQRLRLVLSDTGNVAIPPPVQKTFDAEGEALEHALTKTFRIRNEAIKSLCSSERRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN
Ga0062389_1031579261	3300004092	Bog Forest Soil	MNTQRMSITPKAIQDLLDELEASKQSRLRAWNVLQKLRLVLSELGNVPIPPPAQKTFDAEGEILEHALTKSFRIRNEAIKSLCSSVRRFRDATIKEECKRVIRTLFRRFGKH*
Ga0062386_1003194022	3300004152	Bog Forest Soil	LEASKQSRLRAWNALQRIRALLSDLGKTEIAPAAQKTFDAEGEILEHALTKSLHLQNESIKSLCSSVRRFPDATIKEECKADYPHAPQALWKALDRAEDLIQS*
Ga0062386_1017684411	3300004152	Bog Forest Soil	LRAWNALQRLRAILSETGNAAIPSPAQKTFDAEGEILEHALTKSFRIRNEAIKKLCSAARRFRDATVKEECKRDYPHALQALWKALDRAEDSIQN*
Ga0062388_1023175281	3300004635	Bog Forest Soil	DELESSKQSRLRAWNVLQRLRLILSDTGNVAIPPPAQKTFDAEGEALEHALTKTFRIRNEAIKSLCSSERRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN*
Ga0068868_1024022931	3300005338	Miscanthus Rhizosphere	DELEASKQSRLRAWNVLQRLRLVLTEAGNVAVPPSAQKTFDAEGEILEHALAKSYRIRDEAIKSLCASVRRFRDATIKEERKSDFPHALQALWKALDQAENLIQS*
Ga0070711_1018737272	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IQDLLDELEASKQSRLRAWSVLQRLRMVLSEMGSVAIPPPAQKTFDPEGEALEHALRKSFRRRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN*
Ga0070665_1004727062	3300005548	Switchgrass Rhizosphere	MGITPQAIQDLLDELEASKQSRLRAWNVLQRLRLVLTEAGNVAVPPSAQKTFDAEGEILEHALAKSYRIRDEAIKSLCASVRRFRDATIKEERKSDFPHALQALWKALDQAENLIQS*
Ga0070764_109619952	3300005712	Soil	MAITPKAIQDLLDELESSRQSRLRAWNVLQRLRLVLSDNGNVAVPPPAQKAFDAEGEALEHALKKSLRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALD
Ga0075029_1005337381	3300006052	Watersheds	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSELGSVAIPPPAQKTFYAEGETLEQSLKKCLRLRNDALKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQNE*
Ga0075017_1011781592	3300006059	Watersheds	MSFTSKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSELGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPQALQALWKALDRAEDLIQN*
Ga0075030_1016160012	3300006162	Watersheds	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSELGSVAIPPPAQKTFDAEGEALEHALRKSFHLRNDAIKSLCSSVRRFRDATIKEECKGDYPQALQALW
Ga0070716_1009054601	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	EASKQSRLRAWNVLQKLRSVLSEAANVAIPPPNQKTFDAEGEALEHALTKSFRIRNEAIKTLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN*
Ga0070712_1000770942	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNTSRMSITPKAIQDLLDELEASKQSRLRAWNALQRLRSVLSEMGNVAIPAPTQKTFEAEGEILENVLTKSFRIRNEAIKSLCSSVRRFRDAIIKEECRSDYPHALQALWKALDRAEDLIQS*
Ga0070712_1001604421	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLITPKAIQDLLDELEASKQSRMRAWNALQRFRSVLSEAGHVAIPASVQKTFDEEGAILENALTKSFRIRNDAIKSLCSSVRRFRDATIKEECKCDYPHALQ
Ga0070712_1011067322	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSITPKAIQDLLDELEASKQSRLRAWKALQRLRSVLSEVGNVAIPAPAQKTFDAEGELLEHALTKSFRIRNEAMKSLCSSVRRFRDATIKEECKSDYANALQALWKALDRAEDLIQN*
Ga0070765_1018484272	3300006176	Soil	TPKAIQDLLDELEASKQNRLRAWNVLQRLRSVLCEVANVAIPPPAQQTFDAEGEVLEHALTKSLHLRNEAIKSLCSSVRRFRDATIQKECKSDYPRALQALWKALDRAEDLIQS*
Ga0075021_103700061	3300006354	Watersheds	GHSREVAGCWIPRVGACNALQRLRLVLSENGNVVVPLPAQKTFEADGEILEHALTKSFRIRNEAIKSLCSSVRRFLDATVKEECKRDYPHALQALWKAPDRGEDLIQN*
Ga0073928_100890142	3300006893	Iron-Sulfur Acid Spring	MSITPKAIQDLLDELEASKQSRLRAWNVLQKLRLVLSELGNVPIPPPAQKTFDTEGEILEHALTKSFRIRNEAIKSLFSSVRRFRDATIEEECKRDYPHALQAWLKALDWAEDLIQN*
Ga0073928_103576212	3300006893	Iron-Sulfur Acid Spring	MNTTSMSITPKAIQDLLDDLEASKQSRLRAWSVLQRLRMVLSEAGSVAIPPPAQKTFDAEGEALEHALRKSLRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN*
Ga0073928_105579982	3300006893	Iron-Sulfur Acid Spring	LEASKQSRLRAWNVLQRIRAILSEFGNATIPPATQKTFDAEGEVLEHAITRSFRIRNDAIKSMCSAVRRFRDATIKEDCKGDYPQAREALWKALDRAEDLIQN*
Ga0105242_132835551	3300009176	Miscanthus Rhizosphere	MSITPKAIQDLLEELEASKQSRLRAWNVLQKLRSVLSEAGNVAIPPPNQKTFDAEGEALEHALTKSFRIRNEAIKTLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN*
Ga0105237_109893741	3300009545	Corn Rhizosphere	MGITPQAIQDLLDELEASKQSRLRAWNVLQRLRLVLTEAGNVAVPPSAQKTFDAEGEILEHALAKSYRIRDEGIKSLCASVRRFRDATIKEERKSDFPHALQALWKALDQAENLIQS*
Ga0105249_130782111	3300009553	Switchgrass Rhizosphere	KARRKVVGAIERIQDLLDELEASKQSRLRAWNVLQRLRLVLTEAGNVAVPPSTQKTFEAEGEILEHALAKSYRIRDEAIKSLCASVRRFRDAAIKEDRKSDFPHALQALWKALDQAENLIQS*
Ga0074046_100340173	3300010339	Bog Forest Soil	MSITPRAIQDLLDELETSKQSRLRAWNVLQRLRLVLSELGNVAIPSPAQKTFDAEGEILEHALTKCFRARSDAIKNLCSAVRRFRDATLKESCKGDYPQALQAMLKALDRAEDLIQN*
Ga0074046_101196542	3300010339	Bog Forest Soil	MCSYEHCINVDHTEGNSRLLDELEASKQSRLLAWSVLQRLRMVLSEMGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKNLCSSVRRFRDATIKDECKGDYPHALQALWKALDRAEDLIQNRTM*
Ga0074046_102892331	3300010339	Bog Forest Soil	LLEELEASKQSRLRAWSVLQRLRVVLSALGNVAIPAPKQKTFNAEGEILEHALTKCFRARNDAIKSLCSSVRRFRDATIKEKCKGDYPQALQAMLKALDRAEDLIQN*
Ga0074045_102561332	3300010341	Bog Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWNVLQKLRLVLSELGNVPIPPPAQKTFDAEGEILEHALTKSFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQAL*
Ga0074044_100909162	3300010343	Bog Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWNVLQKLRLVLSELGNVPIPPPAQKTFDAEGEILEHALTKSFRIRNEAIKSLCSSVRRFRDATIKAECRSDYPHALQALWKALDRADDLIQN*
Ga0074044_103306871	3300010343	Bog Forest Soil	MSITPEAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDHPHALQALWKALDRAEDLIQN*
Ga0074044_109895641	3300010343	Bog Forest Soil	LLEELEASEQSRLPAWSVLQRLRVVLSELGNVAIPAPKQKTFNAEGEILEHALTKCFRARSDAIKNLCSAVRRFRDATLKESCKGDYPQALQAMLKALDRAEDL
Ga0136449_1009887781	3300010379	Peatlands Soil	LEVSKENRLRAWYVLQRLCSVLSENGNITIPPPAQKTFDAEGEILEHALTKTLHLRNEAIKSLCSADRHFRDATVKPECRSDYPHALQAFWKALDRAEDLIQS
Ga0136449_1016517191	3300010379	Peatlands Soil	LRAWNVLQRLRAILSETGNVAIPPPAQEKFDAEGKILEHALTKSFMIRDEAIKSLCSSVRRFRDITIKAECRSDYPHALQALWKALDRAEDLIQN*
Ga0136449_1037767421	3300010379	Peatlands Soil	VSAGFVCVGISIILDLEYVHMNTLAMSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEVGSVAIPLPAQKTFDAEGEALEHALRKSFRLRNVAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN*
Ga0137360_115836812	3300012361	Vadose Zone Soil	MSITPKSIQDVLDELEAPKQSRLRAWNALQRLRSILSEMGNAPIPQPSQKTFEAQGEILEHALTKSLRIRNDAIKSLCFAVRRFRGATLKEDCKGDYPKALQAMLKALSSSSSD
Ga0137413_118471641	3300012924	Vadose Zone Soil	RMSITPKAIQDLLEELEASKQSRLRAWNVLQKLRSVLSEAGNVAIPPPRQKTFDAEGEALEHALTKSFRIRNEAIKNLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN*
Ga0164303_101840372	3300012957	Soil	MRAWNALQRFRSVLSEAGHVAIPASVQKTFDEEGAILENALTKSFRIRNDAIKSLCSSVRRFRDATIKEECKCDYPHALQALWKALDRAEDLIQN*
Ga0164304_114189491	3300012986	Soil	MGITPQAIQDLLDELEASKQSRLRAWNVLQRLRLVLTEAGNVAVPPSAQKTFDVEGEILEHALAKSYRIRDEAIKSLCASVRRFRDATIKEERKSDFPHALQALWKALDQAENLIQS*
Ga0164307_105668282	3300012987	Soil	MGITPQAIQDLLDELEASKQSRLRAWNVLQRLRLILTEAGNVPVPPSPQKTFDAEGEILEHALAKSYRIRDEAIKSLCASVRRFRDATIKEERKSDFPHALQALWKALDQAENLIQS*
Ga0164305_110126071	3300012989	Soil	QSRMRAWNALQRFRSVLSEAGHVAIPASVQKTFDEEGAILENALTKSFRIRNDAIKSLCSSVRRFRDATIKEECKCDYPHALQALWKALDRAEDLIQN*
Ga0164305_122196832	3300012989	Soil	ESSKQSRLRAWNVLQRCRLVLSDSGNVAIPPPAQKTFDAEGEALEHALAKTFRTRSEAIKSLCSSVRRFRDATIKEECKSDYPHALQGFVESVR*
Ga0157374_116256572	3300013296	Miscanthus Rhizosphere	MGITPQAIQDLLDELEASKQSRLRAWNVLQRLRLVLTEAGNVAVPPSTQKTFEAEGEILEHALAKSYRIRDEAIKSLCASVRRFRDATIKEDRKSDFPQALQALWKALDQAENLIQS*
Ga0157378_100955953	3300013297	Miscanthus Rhizosphere	VNTFGMSITPKAIQDLLEELEASKQSRLRAWNVLQKLRSVLSEAANVAIPPPNQKTFDAEGEALEHALTKSFRIRNEAIKTLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN*
Ga0157375_119040731	3300013308	Miscanthus Rhizosphere	MGITPQAIQDLLDELEASKQSRLRAWNVLQRLRLVLTEAGNVAVPPSAQKTFDAEGEILEYALAKSYRIRDEAIKSLCASVRRFRDATIKEERKSDFPHALQALWKALDQAENLIQS*
Ga0157376_122784231	3300014969	Miscanthus Rhizosphere	MSITPKAIQDLLEELEASKQSRLRAWNVLQKLRSLLSEAGNVAIPPPNQKTFDAEGEALEHALTKSFRIRNEAIKTLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN*
Ga0210407_103161182	3300020579	Soil	MAITPQAIQDLLDELEASKQSRLRAWHVLQRLRAVLSELGNIAIPPPKQKTFDLEGEILEHALTKCLQTRNDALRNLCSSVRRFRDATLKEECKGDYPQALQSMLKALDRAEDVIQT
Ga0210403_104147702	3300020580	Soil	MSITPKAIQDLLDELEASKQSRLRAWNALQRLRSVLSEMGNVAIPAPTQKTFEAEGEILENVLTKSFRIRNEAIKSLCSSVRRFRDAAIKEECKSDYPHALQALWKALDRAEDLIKD
Ga0210399_111681431	3300020581	Soil	MSITPKAIQDLLDELEASKQSRLRAWNALQRLRSVLSEMGNVAIPAPTQKTFEAEGEILENALTKSLHLRNEAIKSLCSSVRRLRDATIREECKSDYPHALQALWKALDRAEDLIKD
Ga0210401_100816093	3300020583	Soil	MSITPKAIQDLLDELEASKQSRLRAWNALQRLRSVLSEMGNVAIPAPTQKTFEAEGEILENVLTKSFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALSKALDRAEDLIQN
Ga0215015_108129511	3300021046	Soil	YHMSITPKAIQDLLDELEASKRSRLRAWTVLQRLRLVLSENGNVAIPPPAQKTFNAEGEILEHALTKSFRIRDDAIKSLCSSVRRFRDATIKEECKRDYPHALQALWKALDRAEDLIQNWNDV
Ga0215015_108381171	3300021046	Soil	LDQKCVRENTISMSITPKAIQDLLDELEASKQSRLRAWSLLQRLRMVLSELESVAIPSPAKKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATVKEECKGDYPHALQALWKALDRAEDLIQN
Ga0215015_108610215	3300021046	Soil	MSITPKAIQDLLDELESSKQSRLRAWNVLQRLRAVLSDLGDAAIPSPAQKTFDTEGEILKHALTKCLRARNDAIKSLCSAVRRFRDATSKEDCKSDYPRALQAMLKALS
Ga0210405_101111172	3300021171	Soil	MPITPKAIQDLLDELEASKQNRLRAWNVLQRLRSVLCEVANVAIPPPAQQTFDAEGEDLEHALTKSLHLRNEAIKSLCSSVRRFRDATIQKECKSDYPRALQALWKALDRAEDLIQS
Ga0210405_101615763	3300021171	Soil	MSITPKAIQNLLDELEASKQSRLRAWNVLQRLRLVLSEAGNVAIPPPAQKTFDAEGEILEQALTKTLHLRNEAIKSLCSSVRRFRDATMRQECKSDYPHALQALWKALDRAEDLISELRIFL
Ga0210405_103624152	3300021171	Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEMGSVAIPPPVQKTFDAEGETLEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGD
Ga0210405_105036292	3300021171	Soil	MSITPTAIQDLLDELEASKQSRLRAWNALQRLRSVLSEMANVAIPAPTQKTFEAEGEILENALTKSLHLRNEAIKSLCSSVRRFRDATIREECKSDYPHALQALWKALDRAEDLIKD
Ga0210405_106503272	3300021171	Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEMGSVVIPPAAQKTFDTEGQALEHALRKSFRLRNDAIKNLCSSVRRFRDATIKEECKGDYPHAV
Ga0210396_113442172	3300021180	Soil	LDELEASKQSRLRAWNALQRLRSVLSEMANVAIPAPTQKTFEAEGEILENALTKSLHLRNEAIKSLCSSVRRLRDATIREECKSDYPHALQALWKALDRAEDLIKD
Ga0210388_107160102	3300021181	Soil	MSITPKAIQDLLDELEASKQSRLRAWKALQRLRSVLSEMGNVAIPAPAQKTFEAEGEILEHALTRSFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN
Ga0210387_106122142	3300021405	Soil	MSITPTAIQDLLDELEASKQSRLRAWNALQRLRSVLSEMANVAIPAPTQKTFEAEGEILENALTKSLHLRNEAIKSLCSSVRRLRDATIREECKSDYPHALQALWKALDRAEDLIKD
Ga0210387_109059842	3300021405	Soil	SDEHYADMSITPKAIQDLLDELEASKQSRLRAWNALQRIRALLSDLGKIEISPPADKTFDAEGEILEHALSKSLRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN
Ga0210387_109357461	3300021405	Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEAGNVAIPAPAQMTFNAEGEILEHALTKSFRIRNEAMKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN
Ga0210383_108120871	3300021407	Soil	MAITPKAIQDSLDGLESSKQSRLRAWNVLQRLRLVLSDAGNVAISPPAQKTFDAEGEALEHALTKACRIRNEAIKSLSSSVRRFRDATIKEECKSDYPHAL
Ga0210383_114792621	3300021407	Soil	MSITPTAIQDLLDELEASKQSRLRAWNALQRLRSVLSEMANVAIPAPTQKTFEAEGEILENALTKSLHLRNEAIKSLCSSVRRFRDATSREECKSDYPHALQALWK
Ga0210394_108058271	3300021420	Soil	MSITPKAIQNLLDELEASKQSRLRAWNVLQRLRLVLSEAGNVAIPPPAQKTFDAEGEILEQALTKTLHLRNEAIKSLCSSVRRFRDATMRQECKSDYPHALQALWKALDRAEDLISELRI
Ga0210390_100343952	3300021474	Soil	MSITPKAIQDLLDELEASKQSRLRAWKVLQRLRLVLSETGDIAIPPSAQKTFDAEGEILEHALTKSFRIRNDAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN
Ga0210402_116245571	3300021478	Soil	LEASKQSRLRAWNVLQRIRALLSDLGKTAIPPPAHKTFDAEGEILEYTLTKSLRIRNDAIKSLCSAVRRFRDATLKEDRKGDYPQALQALLKALDRAEDLIQD
Ga0210410_101712802	3300021479	Soil	MSITPKAIQDLLDELEASKQSRLRAWNALQRFRSVLSEMGNVAIPAPTQKTFEAEGEILENVLTKSFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALSKALDRAEDLIQN
Ga0212123_102416301	3300022557	Iron-Sulfur Acid Spring	MSITPKAIQDLLDELEASKQSRLRAWNVLQKLRLVLSELGNVPIPPPAQKTFDTEGEILEHALTKSFRIRNEAIKSLFSSVRRFRDATIEEECKRDYPHALQAWLKALDWAEDLIQN
Ga0207692_103533133	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ASKQSRLRAWKALQRLRSVLSEVGNVAIPAPAQKTFDAEGELLEHALTKSFRIRNEAMKSLCSSVRRFRDATIKEECKSDYPNALQALWKALDRAEDLIQN
Ga0207693_103246461	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLITPKAIQDLLDELEASKQSRMRAWNALQRFRSVLSEAGHVAIPASVQKTFDEEGAILENALTKSFRIRNDAIKSLCSSVRRFRDATIKEECKYDYPHSHSSGFVESVGSAGLPRTTT
Ga0207693_104449002	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSITPKAIQDLLDELEASKQSRLRAWKALQRLRSVLSEVGNVAIPAPAQKTFDAEGELLEHALTKSFRIRNEAMKSLCSSVRRFRDATIKEECKSDYANALQALWKALDRAEDLIQN
Ga0207663_117169981	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ASKQSRLRAWSVLQRLRMVLSEVGSVAIPPPAQKTFDPEGETLEHALRKSFRLRNDAIKSLCSSVRRFRDASIKEECKGDYPHALQALWKAPDRAEDLIQN
Ga0207665_112208971	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PKAIQDLLDELEASKQSRMRAWNALQRFRSVLSEAGHVAIPASVQKTFDEEGAILENALTKSFRIRNNAIKSLCSSVRRFRDATVKPECKSDYPHALQALWKALDRAEDLIQNSAMCGRYRRTTAEEEPTRRNIKESC
Ga0209648_101422372	3300026551	Grasslands Soil	MTITPKAIQDLLDELESSKQSRLRAWNVLQRLRLVLSDTGYVAIPPPAQKTFDAEGQALEHALTKSFRIRNEAIKSLCSSVHRFRDATIKGECKSDYPHALQALWKALDRAEDLIQS
Ga0208603_10296281	3300027109	Forest Soil	MNTLLMSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEMGSVAIPPPAQKTFDAEGEVLEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQK
Ga0209524_10567352	3300027521	Forest Soil	VNTISISITPKAIQDLLDELEASKQSRLRAWSVLQRLRMLLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRRRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN
Ga0209735_10127143	3300027562	Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSELGSVAIPPPAQKTFDAEGEALEHALTKPFRLRYDAIKSLCSSVRRFRDATIKEECKGDYPHALQ
Ga0209527_11546892	3300027583	Forest Soil	EASKQNRLRAWNVLQRLRSVLCEVANVAIPPPAQQTFDAEGEVLEHALTKSLHLRNEAIKSLCSSVRRFRDATIQKECKSDYPRALQALWKALDRAEDLIQS
Ga0209331_11248322	3300027603	Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMLLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN
Ga0209422_11064031	3300027629	Forest Soil	MSITLKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSELGSVAIPPPAQKTFDAEGEALEHVLRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN
Ga0209217_11257551	3300027651	Forest Soil	MEITPNAIQDLLDELEASKRSRLRAWNALQRLRLVLSKLGNISIPPPAQKTFDSEGEILEHALTKTFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQD
Ga0209736_11068892	3300027660	Forest Soil	MNTISISITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSETGGVAIPPPAQKTFDAEGEVLENALRKSFRLRNDAIKSLCSSVRRFRDAIIKEECKGDYPHAL
Ga0209009_11217851	3300027667	Forest Soil	MSITPKAIQDLLDELESSKQSRLRAWNVLQRLRSVLSDTGNVAIPPPAQKTFDAEGEALEHALTKSFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDL
Ga0209009_11254011	3300027667	Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLRSSVRRFRDATIKEECKGDYPHALQALWKALDRAEELIQN
Ga0209626_11299831	3300027684	Forest Soil	MNTISMSIIPKAIQDLLDELQASKQSRLRAWSVLQRLRMVLSEMGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN
Ga0209446_10061342	3300027698	Bog Forest Soil	MSITPRAIQDLLDELETSKQSRLRAWNVLQRLRLVLSELGNVAIPSPAQKTFDAEGEILEHALTKCFRARSDAIKNLCSAVRRFRDATLKESCKGDYPQALQAMLKALDRAEDLI
Ga0209328_101964752	3300027727	Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWNVLQRLRSVLSEAGNIEIPPPAQKTFDAEGEALEHALTKSFRIRNEAIKSLFSSVRRFRDATIKAECKSDYPHALQALWKALDRAENLIKG
Ga0209656_100277105	3300027812	Bog Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWRVLQRLRMVLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN
Ga0209656_100645051	3300027812	Bog Forest Soil	MCSYEHCINVDHTEGNSRLLDELEASKQSRLLAWSVLQRLRMVLSEMGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKNLCSSVRRFRDATIKDECKGDYPHALQALWKALDRAEDLIQNRTM
Ga0209656_102169921	3300027812	Bog Forest Soil	MSITPKAIQDLLDELEGSKQSRLRAWRVLQKLRFALSELGNVEIPPPAQKTFDAEGEILEHALTKSFQIRNEAIKSLCTSVRRFRDATIKEECKRDYPHALQALWKALDRAEDLIQN
Ga0209656_102331871	3300027812	Bog Forest Soil	LRAWNALQRLRAILSETGNAAIPSPAQKTFDAEGEILEHALTKSFRIRNEAIKKLCSAARRFRDATVKEECKRDYPHALQALWKALDRAEDSIQN
Ga0209040_103564321	3300027824	Bog Forest Soil	WPSKCSHEPMSITPKAIQDLLEELEASKQSRLRAWSVLQRLRVVLSELGNVAIPAAKRKTFDAEGEILEHALTKCFRARNDAIKSLCSSVRRFRDATIKEKCKGDYPQALQAMFR
Ga0209006_105432481	3300027908	Forest Soil	MAITPKAIQDLLDELESSKQSRLRAWNVLQRFRLVLSETGNVAVPPSAQKTFDAEGEALEHSLTKSLRIRNEAIRSLCSSVRRFRDATIKEDCKSDYPHALQALWKALDRAEDLIQN
Ga0209006_109112761	3300027908	Forest Soil	VLMNTFQPSITPKAIQDLRDELEASKQSRLRAWKVLQSLRWVLSEAGNVTIPPRAQKTFDAEGEILEHALTKSFRLQNDAIKSLCSSVRRFRDATIKEECRSDYPHALQALWKALDRAEDLIRD
Ga0209526_101833872	3300028047	Forest Soil	MEITPNAIQDLLDELEASKRSRLRAWNALQRLRLVLSKLGNISIPPPAQKTFDSEGEILEHALTKTFRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN
Ga0209526_102629051	3300028047	Forest Soil	MPITPKAIQDLLDELEASKQNRLRAWNVLQRLRSVLCEVANVAIPPPAQQTFDAEGEVLEHALTKSFRIRNDAIESLCSRVRRFRDATIKEECKRDYPHALQALWKAL
Ga0308309_104136981	3300028906	Soil	MTITPKAIRDLLDKLEASRQSRLRAWSVLQRLRMVLSDMGSVAIPPPAQKTFYAEGETLEQSLKKSLRLRNDALKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQNE
Ga0222749_107398422	3300029636	Soil	MSVSITPKAIQDLLDELEASKQSRLRAWSVLQRLCMVLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHAVQALWKALDRAEDLIQN
Ga0311340_106159842	3300029943	Palsa	MCSYEHYIMSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEMGNVAIPPAAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATSKEECKGDYPHALQALWKALDRAEDLIQN
Ga0311370_118027581	3300030503	Palsa	MAVTPKAIQDLLDELESSKQSRLRAWKVLQRLRSVLSDSGNVAIPPPAQRTFDAEGEALEHALAKTLRIRNEAIKSLCSSVRRFRDATIKEECKSDYPHALQALWKALDRAEDLIQN
Ga0073998_100595861	3300031023	Soil	EASKQSRLRARNVLQRLRLVLSEAGNVTIPPPAQKTFDAEGEALEHALTRSFRIRNEAIKSLCSSVRRFRDATINEECKYDYPHSPSSGFVEALDRLGLPRTST
Ga0170824_1141764432	3300031231	Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFCLRTDAIKSLCSSVRRFRDATTKEECKGDYPHALQALWKALDRAEDLIQN
Ga0302325_105445801	3300031234	Palsa	MCSYEHYIMSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEMGNVAIPPAAQKTFDAEGEALEHALRKSFRLRNDAIKSQALWKALDRAEDLIQN
Ga0302324_1010052342	3300031236	Palsa	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEMGNVAIPPAAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATSKEECKGDYPHALQALWKALDRAEDLIQN
Ga0310686_1139739312	3300031708	Soil	MSITPKAIQDLLDELETSKQSRLRAWNVLQRLRLVLSELGNVAIPPPAQKTFDAEGEILEHALTKCFRARNDAIKNLCSAVRRFRDATLKENCKGDYPQALQAMLKA
Ga0307476_111994761	3300031715	Hardwood Forest Soil	MSITPKAIQDLLDELEASKQSRLRPWSMLQRLRMVLSEMGSVAIAPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRVRDATIKEECKGDYPHALQALWKALDRAEDLIQN
Ga0307474_114417911	3300031718	Hardwood Forest Soil	MAITPEAIQDLLDELESSKQSRLRAWNVLQRLRLVLSDTGNVAVPPPAQKTFDAEGEVLEHALTKSFRIRNEAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQ
Ga0307477_104252932	3300031753	Hardwood Forest Soil	MSNTPKAIQDLLDELEASKQSRLRAWNVLQRLRSVLSEAGNVAIPPPAQKTFDAEGEALEHALTRSLRIRNEAIKSLCSSVRRFRDATIRQECKSDYPHALQAL
Ga0307475_115433881	3300031754	Hardwood Forest Soil	MSITPKAIQDLLDELEASKQSRLRAWSVLQRLRMVLSEVGSVAIPPPAQKTFDAEGEALEHALRKSFRLRNDAIKSLCSSVRRFRDATIKEECKGDYPHALQALWKALDRAEDLIQN
Ga0307479_108542142	3300031962	Hardwood Forest Soil	MNTIPKPITPKAIQDLVDELEASKQSRLRAWNVLQRLRLVLSVAGNVTIPPPAQKTFDAEGEALEHALTKSFRHRNDAIKSLCSSVRRFRDATIKEECKHDYPHALQALWKALDRAEDLIQD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072662

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences