Metagenome / Metatranscriptome Family F072679

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072679
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	41 residues
Representative Sequence	MLTKDILFGMNILTLAGFIVMGLTLTLNRMGQAGKALSIGLMT
Number of Associated Samples	84
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.76 %
% of genes near scaffold ends (potentially truncated)	90.91 %
% of genes from short scaffolds (< 2000 bps)	93.39 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.719 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.802 % of family members)
Environment Ontology (ENVO)	Unclassified (57.851 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.198 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF08734	GYD	9.92
PF07369	DUF1488	4.13
PF00211	Guanylate_cyc	4.13
PF00106	adh_short	2.48
PF02586	SRAP	2.48
PF07167	PhaC_N	0.83
PF04392	ABC_sub_bind	0.83
PF12680	SnoaL_2	0.83
PF06945	DUF1289	0.83
PF01832	Glucosaminidase	0.83
PF03692	CxxCxxCC	0.83
PF14497	GST_C_3	0.83
PF12535	Nudix_N	0.83
PF04964	Flp_Fap	0.83
PF00296	Bac_luciferase	0.83
PF01032	FecCD	0.83
PF13358	DDE_3	0.83
PF00881	Nitroreductase	0.83
PF07690	MFS_1	0.83
PF01370	Epimerase	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	9.92
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	4.13
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.48
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	0.83
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	0.83
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
All Organisms	root	All Organisms	46.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
cellular organisms	root	All Organisms → cellular organisms	46.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.54 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.92 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.22 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.65 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100870436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300005434\|Ga0070709_10331636	Not Available	1119	Open in IMG/M
3300005445\|Ga0070708_100566810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1071	Open in IMG/M
3300005536\|Ga0070697_101269830	Not Available	657	Open in IMG/M
3300005538\|Ga0070731_10098319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1938	Open in IMG/M
3300005576\|Ga0066708_10977150	Not Available	526	Open in IMG/M
3300005764\|Ga0066903_103772556	Not Available	815	Open in IMG/M
3300006173\|Ga0070716_100313241	Not Available	1097	Open in IMG/M
3300006791\|Ga0066653_10179045	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300009038\|Ga0099829_11733813	Not Available	513	Open in IMG/M
3300009162\|Ga0075423_11585088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300009792\|Ga0126374_10301679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1074	Open in IMG/M
3300010046\|Ga0126384_12246253	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010047\|Ga0126382_11634936	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010048\|Ga0126373_11688300	Not Available	697	Open in IMG/M
3300010048\|Ga0126373_11792244	Not Available	677	Open in IMG/M
3300010358\|Ga0126370_10333940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1217	Open in IMG/M
3300010358\|Ga0126370_11256656	Not Available	692	Open in IMG/M
3300010358\|Ga0126370_11753135	Not Available	599	Open in IMG/M
3300010376\|Ga0126381_103038475	Not Available	666	Open in IMG/M
3300010376\|Ga0126381_104301697	Not Available	551	Open in IMG/M
3300010376\|Ga0126381_104882252	Not Available	515	Open in IMG/M
3300010398\|Ga0126383_12512450	Not Available	599	Open in IMG/M
3300012202\|Ga0137363_11286544	Not Available	619	Open in IMG/M
3300012363\|Ga0137390_10504863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1183	Open in IMG/M
3300012971\|Ga0126369_12519523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	600	Open in IMG/M
3300012971\|Ga0126369_13426760	Not Available	519	Open in IMG/M
3300012985\|Ga0164308_10807558	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300016270\|Ga0182036_10846631	Not Available	747	Open in IMG/M
3300016270\|Ga0182036_10977827	Not Available	697	Open in IMG/M
3300016270\|Ga0182036_11466661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300016294\|Ga0182041_10506452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300016319\|Ga0182033_11985792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	530	Open in IMG/M
3300016319\|Ga0182033_12137561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300016341\|Ga0182035_10076161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2380	Open in IMG/M
3300016371\|Ga0182034_10358872	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300016371\|Ga0182034_12035137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300016422\|Ga0182039_11291820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300016422\|Ga0182039_11941760	Not Available	541	Open in IMG/M
3300016445\|Ga0182038_10136972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1847	Open in IMG/M
3300020579\|Ga0210407_10979327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300020583\|Ga0210401_10765791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	825	Open in IMG/M
3300020583\|Ga0210401_11083550	Not Available	660	Open in IMG/M
3300021171\|Ga0210405_10939948	Not Available	655	Open in IMG/M
3300021406\|Ga0210386_10813529	Not Available	803	Open in IMG/M
3300021406\|Ga0210386_11225125	Not Available	634	Open in IMG/M
3300021406\|Ga0210386_11502449	Not Available	562	Open in IMG/M
3300021420\|Ga0210394_10083565	Not Available	2757	Open in IMG/M
3300021432\|Ga0210384_10971177	Not Available	751	Open in IMG/M
3300021560\|Ga0126371_12798406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300022708\|Ga0242670_1026950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	722	Open in IMG/M
3300022717\|Ga0242661_1070394	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300022724\|Ga0242665_10082251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	923	Open in IMG/M
3300022726\|Ga0242654_10106635	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300025929\|Ga0207664_11619958	Not Available	569	Open in IMG/M
3300027829\|Ga0209773_10174077	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300027846\|Ga0209180_10700585	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300028047\|Ga0209526_10941372	Not Available	521	Open in IMG/M
3300031057\|Ga0170834_106096992	Not Available	602	Open in IMG/M
3300031545\|Ga0318541_10544979	Not Available	649	Open in IMG/M
3300031545\|Ga0318541_10868416	Not Available	503	Open in IMG/M
3300031546\|Ga0318538_10308254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300031561\|Ga0318528_10575461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300031561\|Ga0318528_10661856	Not Available	559	Open in IMG/M
3300031564\|Ga0318573_10682512	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031572\|Ga0318515_10031514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2589	Open in IMG/M
3300031572\|Ga0318515_10634270	Not Available	567	Open in IMG/M
3300031573\|Ga0310915_10038092	Not Available	3045	Open in IMG/M
3300031573\|Ga0310915_10667309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300031640\|Ga0318555_10725029	Not Available	537	Open in IMG/M
3300031679\|Ga0318561_10487706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300031681\|Ga0318572_10075679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1862	Open in IMG/M
3300031681\|Ga0318572_10860722	Not Available	539	Open in IMG/M
3300031682\|Ga0318560_10109153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1438	Open in IMG/M
3300031713\|Ga0318496_10326334	Not Available	848	Open in IMG/M
3300031713\|Ga0318496_10630227	Not Available	592	Open in IMG/M
3300031719\|Ga0306917_10714031	Not Available	787	Open in IMG/M
3300031724\|Ga0318500_10440457	Not Available	651	Open in IMG/M
3300031747\|Ga0318502_10102724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1587	Open in IMG/M
3300031754\|Ga0307475_10276566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	1347	Open in IMG/M
3300031754\|Ga0307475_11249799	Not Available	577	Open in IMG/M
3300031763\|Ga0318537_10240848	Not Available	672	Open in IMG/M
3300031768\|Ga0318509_10016396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3361	Open in IMG/M
3300031779\|Ga0318566_10325535	Not Available	760	Open in IMG/M
3300031781\|Ga0318547_10979116	Not Available	528	Open in IMG/M
3300031795\|Ga0318557_10100445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1279	Open in IMG/M
3300031795\|Ga0318557_10406078	Not Available	626	Open in IMG/M
3300031819\|Ga0318568_10303064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	992	Open in IMG/M
3300031859\|Ga0318527_10492697	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031879\|Ga0306919_10560665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300031890\|Ga0306925_10020082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6656	Open in IMG/M
3300031890\|Ga0306925_11040994	Not Available	831	Open in IMG/M
3300031890\|Ga0306925_11057866	Not Available	823	Open in IMG/M
3300031890\|Ga0306925_11335861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300031910\|Ga0306923_12232355	Not Available	548	Open in IMG/M
3300031912\|Ga0306921_11651692	Not Available	694	Open in IMG/M
3300031912\|Ga0306921_12456498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300031941\|Ga0310912_11203986	Not Available	576	Open in IMG/M
3300031941\|Ga0310912_11337177	Not Available	542	Open in IMG/M
3300031941\|Ga0310912_11339171	Not Available	542	Open in IMG/M
3300031945\|Ga0310913_10134405	Not Available	1699	Open in IMG/M
3300031945\|Ga0310913_10567148	Not Available	805	Open in IMG/M
3300031946\|Ga0310910_10318362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1226	Open in IMG/M
3300031947\|Ga0310909_11546695	Not Available	527	Open in IMG/M
3300031954\|Ga0306926_10370639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1769	Open in IMG/M
3300031954\|Ga0306926_11584722	Not Available	752	Open in IMG/M
3300031954\|Ga0306926_12535231	Not Available	561	Open in IMG/M
3300032001\|Ga0306922_10671274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1093	Open in IMG/M
3300032001\|Ga0306922_11671978	Not Available	631	Open in IMG/M
3300032001\|Ga0306922_12424734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300032044\|Ga0318558_10089454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1428	Open in IMG/M
3300032089\|Ga0318525_10549353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300032174\|Ga0307470_11426199	Not Available	573	Open in IMG/M
3300032261\|Ga0306920_102879709	Not Available	653	Open in IMG/M
3300032261\|Ga0306920_103024285	Not Available	634	Open in IMG/M
3300032261\|Ga0306920_103413363	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032261\|Ga0306920_104036198	Not Available	532	Open in IMG/M
3300033289\|Ga0310914_10279441	Not Available	1504	Open in IMG/M
3300033289\|Ga0310914_10346158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1344	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.52%
Aquatic	Environmental → Aquatic	1.65%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.52%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.74%
Loam	Environmental → Terrestrial → Soil → Loam	5.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1008704362	3300004152	Bog Forest Soil	MFTKDILFGMNIVSLAGFGVMELRLTLRRMAQAGAPLCIGLM
Ga0070709_103316361	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VLTKDILFGMNILTLAGFLVMGLSLTLHRTGRVGAPLSIGLMSVG
Ga0070708_1005668101	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFTKDILFGMNILTLAGFLVMGLSLTLHRIAAAGRLLSIGLMCVG
Ga0070697_1012698302	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLTKDILFGMNVFTLAGFVVMGISLTLRRTKNAGAPLCIGLMCAG
Ga0070731_100983191	3300005538	Surface Soil	MLTRDILFGMNILSLAGFLLMGLTLTLSRQRRLGAPLAYSLMGVG
Ga0066708_109771502	3300005576	Soil	VLTKDIVFGMNVLSLAGFLVMGLSLTLHRTGNAGIPLSIGLM
Ga0066903_1037725563	3300005764	Tropical Forest Soil	VLTKDILFGMNVLTLAGFLVMGLSLTLHRTGNAGAPLSIGLMC
Ga0070716_1003132411	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VLTKDILFGMNILTLAGFLVMGLSLTLHRTGRVGAPLSIGL
Ga0066653_101790452	3300006791	Soil	VLTKDILFGMNLLTLVGFLVMGLSLTLHRTGNASVSLSI
Ga0099829_117338131	3300009038	Vadose Zone Soil	MFTKDIIFGMNILTLAGFVVMGLSLTLRRMAVAGGPLCIGLM
Ga0075423_115850881	3300009162	Populus Rhizosphere	MFTKDILFGMNILTLAGFLIMGLSLTLRRMAAAGVPLSIGLMCAGT
Ga0126374_103016791	3300009792	Tropical Forest Soil	MLTKGILFGMNILTLAGFALMGLTLTLNRMGQAGRA
Ga0126384_122462531	3300010046	Tropical Forest Soil	VLTKDILFGMNILTLAGFVVMGLSLTLYRMGTAGAPLSIGL
Ga0126382_116349361	3300010047	Tropical Forest Soil	VLTKDILFGMNILTLAGFVVMGLTLTLNRMGQTSTTFPK*
Ga0126373_116883002	3300010048	Tropical Forest Soil	LTKDILFGMNLLTLAGFLVMGLSLTLHRMGNAGVRLSIGA*
Ga0126373_117922441	3300010048	Tropical Forest Soil	MLTKDILFGMNIITLAGFVVMGLSLSLNRTGQIGAPL
Ga0126370_103339403	3300010358	Tropical Forest Soil	MLTKGILFGMNILTLAGFVVMGLTLTLNRMGQAGKALS
Ga0126370_112566562	3300010358	Tropical Forest Soil	VLTKDILFGMNILTLVDFLVMGLSLTLHRTGNAGVALSIGLMCAGTAL
Ga0126370_117531352	3300010358	Tropical Forest Soil	MNLLTLAGFIVMGLTLTLNRMGRAGKGLSIGLMAAGTALVFL
Ga0126381_1030384752	3300010376	Tropical Forest Soil	VLTKDILFGMNILTLAGFVVMGLTLTLNRMGQTRKALSVGLMVAGT
Ga0126381_1043016972	3300010376	Tropical Forest Soil	MLTKEILFGMNILTLAGFIVMGLTLTLNRMGQTGKA
Ga0126381_1048822521	3300010376	Tropical Forest Soil	VLTKDILFGMNILTLAGFVVMGLTLTLNRMGQAGKA*
Ga0126383_125124501	3300010398	Tropical Forest Soil	VLTRDILFGVNILTLAGFVVMGLTLTLNRMGQAGKALSIGLMAAGTA
Ga0137363_112865441	3300012202	Vadose Zone Soil	MFTNDILFGMNILSLAGFVVMGLSLSLRRVAQAGAPV
Ga0137390_105048633	3300012363	Vadose Zone Soil	VLTKDILFGMNVFTLAGFVVMGISLTLRRMKNAGVPYALG*
Ga0126369_125195231	3300012971	Tropical Forest Soil	MLTMGILFGMNILTLSGFALIGLTLTLNRMGQAGRAL
Ga0126369_134267601	3300012971	Tropical Forest Soil	MAAFPKDILFGMNLVTLAGFVVMGLTLTLNRMGQAGKALSIGLMAAGT
Ga0164308_108075581	3300012985	Soil	VLTKDILFGMNVLSLAGFLVMGLSLTLHRTGNAGIPLSIG*
Ga0182036_108466311	3300016270	Soil	VLAKDILFGMNILTLAGFVVMGITLTLNRMGQAGKALCIGLMTAGTA
Ga0182036_109778272	3300016270	Soil	MLTKDILFGMNILTVAGFVVMGLTLTLNRMGQAGKALSIGL
Ga0182036_114666612	3300016270	Soil	MLTKDILFGMNILTLIGFVVMGLTLTLNRMGQAGKALSIG
Ga0182041_105064522	3300016294	Soil	MLTKDILFGMNIMTLAGFALMGLSLSLNRTGQIGARLSVGLMC
Ga0182033_119857921	3300016319	Soil	MLTKDILFGMNILTLTGFVVMGLTLTLNRMGQTGKALSIGLMAAG
Ga0182033_121375611	3300016319	Soil	MLTKDILFGMNILTLTGIVVMGLTLTLNRMGQAGKA
Ga0182035_100761613	3300016341	Soil	MLTRDILFGMNTLTLAGFVVMGLSLSLNRTGQIGAPLSVGLMC
Ga0182034_103588722	3300016371	Soil	MNILTLAGFVVMGITLTLNRMGQTRKALSVGLMVAGPLWSSL
Ga0182034_120351371	3300016371	Soil	MLTKEILFGMNILTLAGFIIMGLTLTLNRMGQAGKAL
Ga0182039_112918202	3300016422	Soil	MLTKDILFGMNILTLAGFVVMGLSLSLNRTGQIGAPLSV
Ga0182039_119417601	3300016422	Soil	VLTKDILFGMNVLTLAGFLVMGLSLTLRRTGNASV
Ga0182038_101369724	3300016445	Soil	MLTKEILFGMNILTLAGFIIMGLTLTLNRMGQAGKALS
Ga0210407_109793272	3300020579	Soil	MFTKDILFGMNILTLAGFVVMGLSLTLHRMAAAGRPLSIGLM
Ga0210401_107657913	3300020583	Soil	MLTRDILFGMNLLTLAGFAVMGLSLTLRRMAAAGGPLSIGLMLAGT
Ga0210401_110835501	3300020583	Soil	MFTKDILFGMNILTLTGFVVMGLSLTLHRRAAAGRPLAIGPYV
Ga0210405_109399481	3300021171	Soil	VLTKDILFGMNVLSLAGFLVMGLSLTLHRTGNAGIPLSI
Ga0210385_114461251	3300021402	Soil	MLTRDIAFGMNAVTLAGLLIMGFGLTLQRMARARLPLSIGVMGV
Ga0210386_108135291	3300021406	Soil	VLTRDILFGMNLLTLAEFVVMGLTLILNRMGQTGKGLSIGLMAAGT
Ga0210386_112251251	3300021406	Soil	VLTKDILFGMNILTLAGFVVMGLTLTLNRTGQAGKLLSIGLM
Ga0210386_115024492	3300021406	Soil	VLTKDILFGMNLLSLGGFLVMGLSLTLHRAGNAGIPLSIGLMCAGT
Ga0210394_100835651	3300021420	Soil	MFTKDILFGMNILTLAGFVVMGLSLTLHRMAAAGRPLSIGLMCAG
Ga0210384_109711772	3300021432	Soil	MLTKDILFGMNILTLAGFAVMGITVALSRSGQTGKARASH
Ga0126371_127984062	3300021560	Tropical Forest Soil	VLTKDILFGMNLLTLAGFLVMGLSLTLHRTGNVGVPL
Ga0242670_10269501	3300022708	Soil	VLTRDILFGMNILSLAGFVVMGLTLTLNRVGQAGKGLSIGLMTAGTA
Ga0242661_10703942	3300022717	Soil	VLTKDILFGMNVPTLVGFLVMGLSLTLRRTGNASVPLSIGLMCA
Ga0242665_100822511	3300022724	Soil	MLTRDILFGMNLLTLAGFAVMGLSLTLRRMAAAGGPLSIGLMLAG
Ga0242654_101066351	3300022726	Soil	MLTKDFLFGLNILSLAGFLVMGLGVSLNRTGRIGVPLSV
Ga0207664_116199581	3300025929	Agricultural Soil	VLTRDILFGMNILTLAGFVVMGLTLTLNRMGQAGKGLSIAS
Ga0209773_101740773	3300027829	Bog Forest Soil	MLTQDILFGMNIVTLVGFVIMGLSLTLHRMAAAGRSL
Ga0209180_107005851	3300027846	Vadose Zone Soil	MFTKDILFGMNIVTLAGFALMGLTLTLRRMAQAGTPLSIG
Ga0209526_109413721	3300028047	Forest Soil	LPTKDILFGMNLLSLAGFLVMGLSLTLYRTGNVGIPLSIGLMCA
Ga0170834_1060969922	3300031057	Forest Soil	MLTKDILFGINILTLGGLIVVRLSLTLQRSQRLGGR
Ga0318541_105449791	3300031545	Soil	MLTKDILFGMNILTLAGFIVMGLTLTLNRMGQAGKALSIGLMT
Ga0318541_108684162	3300031545	Soil	MLTKDILFGMNILALAGFSVMGLSLTLQRMAAAGRPLSISLMC
Ga0318538_103082541	3300031546	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSIGLMTAGTALV
Ga0318528_105754611	3300031561	Soil	MLTRDILFGMNTLTLAGFVVMGLSLSLNRTGQIGAPLSVGLMCAG
Ga0318528_106618561	3300031561	Soil	MLTKEILFGMNILTLAGFIVMGLALTLNRMGQTGKAQSIALM
Ga0318573_106825121	3300031564	Soil	VLTKDILFGMNILTLAGFVVMGLALTLNRMGQTRKAL
Ga0318515_100315141	3300031572	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSMS
Ga0318515_106342701	3300031572	Soil	MLTKDILFGMNILTLAGFIIMGLSLTLQRIAAASRPLSIGLMCAGTA
Ga0310915_100380921	3300031573	Soil	MLTKDILFGMNILTVAGFVVMGLTLTLNRMGQASKPVSIGLM
Ga0310915_106673092	3300031573	Soil	MLTKDILFGMNIMTLAGFALMGLSLSLNRTGQIGARLSVGLMCVG
Ga0318555_107250291	3300031640	Soil	MLTKDILFGMNILTLAGFIIMGLSLTLQRMAAASRPLSIGL
Ga0318561_104877062	3300031679	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKAL
Ga0318572_100756791	3300031681	Soil	MLTKDILFGMNILTLAGFVVMGLSLSLNRTGQIGAPLSVGLMCA
Ga0318572_108607222	3300031681	Soil	VLAKDILFGMNILTLAGFVVMGITLTLNRMGRAGKGRRIGLMTAG
Ga0318560_101091533	3300031682	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSMSIMSQ
Ga0318496_103263341	3300031713	Soil	VLTKDILFGMNILTLAGFVVMGLTLTLNRMGQTGKALS
Ga0318496_106302271	3300031713	Soil	MLTKDILLGMNILTLAGFMVMGLTLTLNRMGQAGKALSIGLMT
Ga0306917_107140313	3300031719	Soil	KDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSI
Ga0318500_104404571	3300031724	Soil	VLAKDILFGMNILTLAGFVVMGITLTLNRMGQAGKALCIGLMTAGT
Ga0318502_101027245	3300031747	Soil	MLTKEILFGMNILTLAGFVVMGLTLTLNRTGQAGKALSIG
Ga0307475_102765663	3300031754	Hardwood Forest Soil	VLTKDILFGMNILTLAGFVVMGLTLTVNRMGQAGKGLSIG
Ga0307475_112497991	3300031754	Hardwood Forest Soil	VLTRDILFGMNILTLAGFVVMGLTLTLNRMGQAGKG
Ga0318537_102408481	3300031763	Soil	VLTKDILFGMNILTLAGFVVMGITLTLNRMGQTRKAF
Ga0318509_100163967	3300031768	Soil	MLTKDILFGMNILTLAGFVVMGLSLSLNRTGQIGAPLSVGLM
Ga0318566_103255351	3300031779	Soil	VLTKDILFGMNILTLAGFVVMGITLTLNRMGQTRK
Ga0318547_109791161	3300031781	Soil	MLTKEILFGMNILTLAGFIVMGLTLTLNRMGQISKALSIGLM
Ga0318557_101004452	3300031795	Soil	MLTKDILFGMNILTLAGFIIMGLSLTLQRMAAASRPLSIGLMCAGTAL
Ga0318557_104060781	3300031795	Soil	MLTKDILFGMNILALAGFSVMGLSLTLQRMAAAGRPLS
Ga0318568_103030641	3300031819	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSIGLM
Ga0318527_104926971	3300031859	Soil	VLTKDILFGMNILTLAGFVVMGITLTLNRMGQTRKAFSVGLMVTGT
Ga0306919_105606652	3300031879	Soil	MLTKDILFGMNILTLAGFVVMGLSLSLNRTGQIGAPLSVGLMCAGTA
Ga0306925_100200821	3300031890	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSMSIMSQTAGFYL
Ga0306925_110409941	3300031890	Soil	MLTKDILFGMNILTLTGFVVMGITLTLNRAGQAGKALSIGLMAAG
Ga0306925_110578661	3300031890	Soil	RTFAKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSI
Ga0306925_113358612	3300031890	Soil	MLTKDILFGMNIMTLAGFALMGLSLSLNRTGQIGARLSVGLMCVGTA
Ga0306923_122323551	3300031910	Soil	VLTKDILFGMNLLTLLGFLVMGLSLTLRRTGNASVPLSIGMMGAG
Ga0306921_116516922	3300031912	Soil	MLTKDILFGMNILTLAGFIVMGLTLTLNRMGQAGKA
Ga0306921_124564981	3300031912	Soil	MLTKEILFGMNILTLAGFIIMGLTLTLNRMGQAGKA
Ga0310912_112039861	3300031941	Soil	MLTKEILFGMNILTLAGFIVMGLTLTLNRMGQISKA
Ga0310912_113371771	3300031941	Soil	AGPMLTKDILFGMNILTLAGFVVMGLTLTLNRMGQAGRA
Ga0310912_113391712	3300031941	Soil	MLTEDILLGMNILTLAGFVVMGLTLTLNRMGQAGKALSIGLMTAG
Ga0310913_101344054	3300031945	Soil	TDRDRAMLTKDILFGMNILTLAGFVVMGLTLTLNRMG
Ga0310913_105671482	3300031945	Soil	VLTRDILFGMNILTLAGFVVMGLTLTLNRMGQAGKVV
Ga0310910_103183621	3300031946	Soil	MLTKEILFGMNILTLAGFIIMGLTLTLNRMGQAGK
Ga0310909_115466952	3300031947	Soil	VLTKDILFGMNVLTLAGFIVMGLSLTLQRMAAASRAFSIGLMCAG
Ga0306926_103706393	3300031954	Soil	MLTKDILFGMNIITLAGFVVMGLSLSLNRTGQIGAPLSVG
Ga0306926_115847221	3300031954	Soil	VLTKDILFGINILTLAGFLVMGISLTLHRTGNAGVPLTIGLMCA
Ga0306926_125352311	3300031954	Soil	MLTKEILFGMNILTLAGFIVMGLTLTLNRMGQTSKALSIGLMT
Ga0306922_106712741	3300032001	Soil	MLTKEILFGMNILTLVGFIVMGLTLTLNRIGRTGKALSIGLMTAG
Ga0306922_116719781	3300032001	Soil	MLTKEILFGMNILTLAGFIVMGLALTLNRMGQTGKALSIALMTAGTA
Ga0306922_124247342	3300032001	Soil	MLTKGILFGTNLLTLAGFPMMGITLTLNRMGQAGKALSI
Ga0318558_100894543	3300032044	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALS
Ga0318506_102731091	3300032052	Soil	VLTKDILFGMNIVTLAGFVLMGITLTLNRTGQAGKALSIGLMAE
Ga0318525_105493532	3300032089	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSI
Ga0307470_114261992	3300032174	Hardwood Forest Soil	MLTKDILFGMNILTLVGFVVMGLTVALSRSGQAGKGLRIGLI
Ga0306920_1028797092	3300032261	Soil	MLTKDILFGMNISTLAGFLVMGLSVTLHRTGNAGVLL
Ga0306920_1030242852	3300032261	Soil	VLTRDIFYGMNVLTLAGFLVMGITLTLNRTGQTGKLLSIGLMTVGT
Ga0306920_1034133631	3300032261	Soil	VFTKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSMSIMSQTAGFYLG
Ga0306920_1040361981	3300032261	Soil	MLTKDILFGMNMLTLTGFAVMGITLTLNRAGQAGKALSIG
Ga0310914_102794414	3300033289	Soil	FAKDILFGMNILTLAGFAVMGITLTLNRMGQAGKALSI
Ga0310914_103461585	3300033289	Soil	MLTKEILLGMNILTLVGFVVMGLTLTVNRMGHAGKALSIGLMTAGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072679

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences