NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F072711

Metagenome / Metatranscriptome Family F072711

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072711
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 54 residues
Representative Sequence MMIDPKPKLIAALGNAQEYLDLATSAKDRGEREFYERIAELYLKIAQELEALVEG
Number of Associated Samples 87
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.78 %
% of genes near scaffold ends (potentially truncated) 21.49 %
% of genes from short scaffolds (< 2000 bps) 81.82 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (78.512 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(39.669 % of family members)
Environment Ontology (ENVO) Unclassified
(46.281 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.281 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 56.63%    β-sheet: 0.00%    Coil/Unstructured: 43.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.25.1.2: Ribonucleotide reductase-liked2uw1a_2uw10.91587
a.25.1.1: Ferritind1yuza11yuz0.90728
a.25.1.9: Rv2844-liked2ib0a12ib00.90054
a.25.1.1: Ferritind2fzfa12fzf0.89846
a.25.1.1: Ferritind1nfva_1nfv0.89088

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00521DNA_topoisoIV 14.05
PF11967RecO_N 4.96
PF05239PRC 3.31
PF08811DUF1800 2.48
PF08840BAAT_C 1.65
PF02565RecO_C 1.65
PF13191AAA_16 0.83
PF03600CitMHS 0.83
PF08734GYD 0.83
PF13280WYL 0.83
PF13424TPR_12 0.83
PF00293NUDIX 0.83
PF07504FTP 0.83
PF00005ABC_tran 0.83
PF03772Competence 0.83
PF00144Beta-lactamase 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0188DNA gyrase/topoisomerase IV, subunit AReplication, recombination and repair [L] 14.05
COG5267Uncharacterized conserved protein, DUF1800 familyFunction unknown [S] 2.48
COG1381Recombinational DNA repair protein RecO (RecF pathway)Replication, recombination and repair [L] 1.65
COG0658DNA uptake channel protein ComEC, N-terminal domainIntracellular trafficking, secretion, and vesicular transport [U] 0.83
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.83
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.83
COG2367Beta-lactamase class ADefense mechanisms [V] 0.83
COG3227Zn-dependent metalloprotease (Neutral protease B)Posttranslational modification, protein turnover, chaperones [O] 0.83
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.51 %
UnclassifiedrootN/A21.49 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908029|A2_v1_NODE_26371_len_760_cov_5_530263Not Available810Open in IMG/M
2124908043|A2_c1_ConsensusfromContig35072All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1400Open in IMG/M
2124908043|A2_c1_ConsensusfromContig68403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1844Open in IMG/M
3300001545|JGI12630J15595_10055145All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei792Open in IMG/M
3300001593|JGI12635J15846_10226030All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300001661|JGI12053J15887_10350128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei715Open in IMG/M
3300002245|JGIcombinedJ26739_100373831All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1305Open in IMG/M
3300005341|Ga0070691_10671993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae619Open in IMG/M
3300005471|Ga0070698_100215804Not Available1853Open in IMG/M
3300005950|Ga0066787_10011712All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1416Open in IMG/M
3300005950|Ga0066787_10059318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae751Open in IMG/M
3300005952|Ga0080026_10012342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2015Open in IMG/M
3300005993|Ga0080027_10124942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei976Open in IMG/M
3300005993|Ga0080027_10341813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei599Open in IMG/M
3300005994|Ga0066789_10020429All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2935Open in IMG/M
3300006041|Ga0075023_100187657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei789Open in IMG/M
3300006050|Ga0075028_100389613Not Available794Open in IMG/M
3300006050|Ga0075028_100415886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei771Open in IMG/M
3300006050|Ga0075028_100773738Not Available583Open in IMG/M
3300006172|Ga0075018_10386481Not Available709Open in IMG/M
3300007255|Ga0099791_10040725All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.2062Open in IMG/M
3300007255|Ga0099791_10107448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1288Open in IMG/M
3300007255|Ga0099791_10208462All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei922Open in IMG/M
3300007258|Ga0099793_10058076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1724Open in IMG/M
3300007258|Ga0099793_10227160Not Available898Open in IMG/M
3300007265|Ga0099794_10051833Not Available1977Open in IMG/M
3300007788|Ga0099795_10036240All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1730Open in IMG/M
3300009038|Ga0099829_10233974All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium1495Open in IMG/M
3300009038|Ga0099829_10417901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1109Open in IMG/M
3300009143|Ga0099792_10103413Not Available1500Open in IMG/M
3300009148|Ga0105243_10958658Not Available855Open in IMG/M
3300010877|Ga0126356_10831196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1900Open in IMG/M
3300011269|Ga0137392_10624430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei894Open in IMG/M
3300011270|Ga0137391_10168326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1910Open in IMG/M
3300011444|Ga0137463_1010693All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3145Open in IMG/M
3300012096|Ga0137389_10219568All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1589Open in IMG/M
3300012203|Ga0137399_11017403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium698Open in IMG/M
3300012203|Ga0137399_11287753Not Available615Open in IMG/M
3300012205|Ga0137362_10359720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium1260Open in IMG/M
3300012363|Ga0137390_11063506Not Available759Open in IMG/M
3300012685|Ga0137397_10010665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium6395Open in IMG/M
3300012685|Ga0137397_10066657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2602Open in IMG/M
3300012685|Ga0137397_10143700All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1766Open in IMG/M
3300012685|Ga0137397_10245891All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1333Open in IMG/M
3300012685|Ga0137397_10273902All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1257Open in IMG/M
3300012685|Ga0137397_11017544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.609Open in IMG/M
3300012922|Ga0137394_10750059Not Available820Open in IMG/M
3300012922|Ga0137394_10834659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei771Open in IMG/M
3300012927|Ga0137416_10425585Not Available1130Open in IMG/M
3300012927|Ga0137416_10497587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1049Open in IMG/M
3300012929|Ga0137404_10095841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2383Open in IMG/M
3300012929|Ga0137404_10097993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2359Open in IMG/M
3300012944|Ga0137410_10152227All Organisms → cellular organisms → Bacteria → Proteobacteria1763Open in IMG/M
3300012944|Ga0137410_10234809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1432Open in IMG/M
3300012944|Ga0137410_10686441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011852Open in IMG/M
3300012944|Ga0137410_11948687All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium521Open in IMG/M
3300012985|Ga0164308_10339402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1208Open in IMG/M
3300013306|Ga0163162_10154169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei2416Open in IMG/M
3300015241|Ga0137418_10013701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium7482Open in IMG/M
3300015241|Ga0137418_10296337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1354Open in IMG/M
3300015245|Ga0137409_10039582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4528Open in IMG/M
3300015245|Ga0137409_10068381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3329Open in IMG/M
3300017997|Ga0184610_1191705All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300018053|Ga0184626_10017192All Organisms → cellular organisms → Bacteria → Proteobacteria2905Open in IMG/M
3300019789|Ga0137408_1303941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1312Open in IMG/M
3300019789|Ga0137408_1436481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1261Open in IMG/M
3300019866|Ga0193756_1030736All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei758Open in IMG/M
3300019874|Ga0193744_1005510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium2306Open in IMG/M
3300019885|Ga0193747_1142178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei552Open in IMG/M
3300019886|Ga0193727_1038917All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1586Open in IMG/M
3300019886|Ga0193727_1182823Not Available537Open in IMG/M
3300019887|Ga0193729_1056284Not Available1585Open in IMG/M
3300019887|Ga0193729_1085868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1219Open in IMG/M
3300019887|Ga0193729_1144572Not Available864Open in IMG/M
3300020002|Ga0193730_1057542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1117Open in IMG/M
3300020012|Ga0193732_1012501All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1467Open in IMG/M
3300020170|Ga0179594_10355222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei556Open in IMG/M
3300020579|Ga0210407_11469930Not Available504Open in IMG/M
3300021086|Ga0179596_10010877All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2981Open in IMG/M
3300021086|Ga0179596_10207626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei955Open in IMG/M
3300021478|Ga0210402_10893856All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069815Open in IMG/M
3300024288|Ga0179589_10267303All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei763Open in IMG/M
3300025905|Ga0207685_10165436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1013Open in IMG/M
3300025915|Ga0207693_10388126All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1092Open in IMG/M
3300025934|Ga0207686_11775897Not Available510Open in IMG/M
3300025938|Ga0207704_11019449Not Available701Open in IMG/M
3300026281|Ga0209863_10013689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei2540Open in IMG/M
3300026285|Ga0209438_1061236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1238Open in IMG/M
3300026285|Ga0209438_1201280Not Available531Open in IMG/M
3300026291|Ga0209890_10019207All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei2680Open in IMG/M
3300026345|Ga0257148_1008408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei768Open in IMG/M
3300026354|Ga0257180_1026529All Organisms → cellular organisms → Bacteria → Proteobacteria773Open in IMG/M
3300026355|Ga0257149_1071064All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei511Open in IMG/M
3300026361|Ga0257176_1034466All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei771Open in IMG/M
3300026374|Ga0257146_1042484All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.737Open in IMG/M
3300026482|Ga0257172_1034886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei912Open in IMG/M
3300026497|Ga0257164_1035116Not Available767Open in IMG/M
3300026508|Ga0257161_1095069All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei619Open in IMG/M
3300026557|Ga0179587_10069889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium2064Open in IMG/M
3300026557|Ga0179587_10737089All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei649Open in IMG/M
3300026557|Ga0179587_11111014Not Available520Open in IMG/M
3300027521|Ga0209524_1016290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1522Open in IMG/M
3300027535|Ga0209734_1007078All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2002Open in IMG/M
3300027587|Ga0209220_1093878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria789Open in IMG/M
3300027651|Ga0209217_1058747All Organisms → cellular organisms → Bacteria1146Open in IMG/M
3300027655|Ga0209388_1092988All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium866Open in IMG/M
3300027669|Ga0208981_1172949Not Available546Open in IMG/M
3300027671|Ga0209588_1000807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium7958Open in IMG/M
3300027678|Ga0209011_1015661All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2494Open in IMG/M
3300027727|Ga0209328_10087308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei954Open in IMG/M
3300027894|Ga0209068_10128878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1355Open in IMG/M
3300027894|Ga0209068_10217644All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1055Open in IMG/M
3300028047|Ga0209526_10039496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3318Open in IMG/M
3300028047|Ga0209526_10636233Not Available679Open in IMG/M
3300028792|Ga0307504_10034259All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1366Open in IMG/M
3300028792|Ga0307504_10230761Not Available669Open in IMG/M
3300028824|Ga0307310_10198480All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium946Open in IMG/M
3300031231|Ga0170824_119915136All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium940Open in IMG/M
3300031446|Ga0170820_10422427All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium958Open in IMG/M
3300031474|Ga0170818_114378379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium917Open in IMG/M
3300031708|Ga0310686_105589749Not Available744Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil39.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.40%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.26%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds5.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil3.31%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil2.48%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.48%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil2.48%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.65%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.83%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908029Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2EnvironmentalOpen in IMG/M
2124908043Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2EnvironmentalOpen in IMG/M
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005950Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026345Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-AEnvironmentalOpen in IMG/M
3300026354Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-BEnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027535Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2_v1_000594102124908029SoilMMIDLKPKLIAALGNAQEYIDLATSAKNRGEREFYERIAELYLKIGQELEALVEG
A2_c1_009060102124908043SoilNGGSILMMIDPKPKLIAVLGNAQEYIDLATSAEDRGEREFYERIAELYIKIARELEALVE
A2_c1_004508002124908043SoilMMIDLKPKLIAALGNAQEYIDLATSAKNRGEREFYERIAELYLKIAQELEALVEG
JGI12630J15595_1005514523300001545Forest SoilMMIDLKPRLIAALGNAQEYLDLATSAKDRGERAFYERIAELYIKIARELEALVEE*
JGI12635J15846_1022603023300001593Forest SoilMIDPKPKLIAALGNAQEYLDLAISAQDRGEREFYKRIAELYLKIAQELDAMMGE*
JGI12053J15887_1035012813300001661Forest SoilMIDPKPRLIAALDNAQEYLDLATSAQDRGEREFYKRIAELYLKIAQELEAIMGE*
JGIcombinedJ26739_10037383133300002245Forest SoilMMIDPKPKLIAALGNAQEYIDLATSAQDRGEREFYERIAELYIKIAQELEALVEG*
Ga0070691_1067199323300005341Corn, Switchgrass And Miscanthus RhizosphereMMIDPKAKLIDILGNAQEYLDLATKSTDRGERELYERIVALYLKIAQELETLIDK*
Ga0070698_10021580423300005471Corn, Switchgrass And Miscanthus RhizosphereMMIDPKPRLIAALGNAQEYIDLATSAKDRGEREFYERIAELYIRIAQELEVLVEG*
Ga0066787_1001171223300005950SoilMMIDPKPKLIAVLGNAQEYIDLATSAEDRGEREFYERIAELYIKIARELEALVEG*
Ga0066787_1005931813300005950SoilLGNAQEYIDLATSAKDRGERAFYERIAELYIKIARELEALAEG*
Ga0080026_1001234213300005952Permafrost SoilMMIDPKPKLIAVLGNAQEYIDLATSAEDRGEREFYERIAELYIKI
Ga0080027_1012494213300005993Prmafrost SoilLMMIDPKPKLIAVLGNAQEYIDLATSAEDRGEREFYERIAELYIKIARELEALVEG*
Ga0080027_1034181323300005993Prmafrost SoilMMMIDPKPKLIAALGNAQEYIDLATSAKDRGERAFYERIAELYIKIARELEALAEG*
Ga0066789_1002042923300005994SoilMMIDPKPKLIAALGNAQEYIDLATSAKDRGERAFYERIAELYIKIARELEALAEG*
Ga0075023_10018765723300006041WatershedsMIDPKPKLIAVLGNAQEYLDLAESTKDRDEREFYQRIAELYLKIAQELEAMMDG*
Ga0075028_10038961313300006050WatershedsLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG*
Ga0075028_10041588613300006050WatershedsMIDPKPRLIAVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG*
Ga0075028_10077373823300006050WatershedsMMIDPKPRLIAALGNAQEYIDLATSAKDRGEREFYERIAELYIKIAQEFEALVEG*
Ga0075018_1038648113300006172WatershedsMMIDPKAKLVDVLGNAQEYLDLATKSTDRGERELYERIVALYLKIAQELETLIDK*
Ga0099791_1004072523300007255Vadose Zone SoilMIDPKPKLIEILGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG*
Ga0099791_1010744813300007255Vadose Zone SoilMIDPKPRLIAALGNVQEYLDLAISVQDRSEREFYEPIAELYFKIAQELEAMMGG*
Ga0099791_1020846223300007255Vadose Zone SoilMIDPKPKLIAALDNAQEYLDLATSAQDRGEREFYKRIAELYLKIAQELEAMMGE*
Ga0099793_1005807623300007258Vadose Zone SoilMIDPKPKLIEVLGNVQEYLDLAASTKDRSEREFYQRIAELYLKIAQELEAMMGG*
Ga0099793_1022716033300007258Vadose Zone SoilSRKRSSSNGGSVFMMIDPKPKLIAALGNAQEYLDLATSAKDRGEREFYERIAVLYIKIAQELDALVEG*
Ga0099794_1005183333300007265Vadose Zone SoilMIDPKPKLIEVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG*
Ga0099795_1003624013300007788Vadose Zone SoilMMIDPKPKLIAALGNAQEYLDLATSAKDRGEREFYERIAVLYIKIAQELDAL
Ga0099829_1023397413300009038Vadose Zone SoilEYLDLATSAKDRGERAFYERIAELYIKIAQELEALVEG*
Ga0099829_1041790133300009038Vadose Zone SoilMMIDPKPKLIAALGNAQEYLDLATSAKDRGERAFYERIAELYIKIAQELEALVEG*
Ga0099792_1010341333300009143Vadose Zone SoilMMIDPKPKLIAALGNAQEYLDLATSAKDRGEREFYERIAVLYIKIAQELDALVEG*
Ga0105243_1095865813300009148Miscanthus RhizosphereRRIAMMIDPKAKLIDILGNAQEYLDLATKSTDRGERELYERIVALYLKIAQELETLIDK*
Ga0126356_1083119613300010877Boreal Forest SoilLDNAQEYLDLATSAHDRGEREFYKRIAELYLKIAQELEAMTGE*
Ga0137392_1062443013300011269Vadose Zone SoilMMIDPKPKLIAALGSAQEYIDLATSAKDRGERAFYERIAELYIKIAQELEALVEG*
Ga0137391_1016832633300011270Vadose Zone SoilMMIDPKSRLIAALGNAQEYIDLAASAKDRGEREFYERIAELYIRIAQELDALVEG*
Ga0137463_101069343300011444SoilMIDPKPKLIAVLGNVQEYLDLAASTQDRGEREFYQRIAELYLKIARELEAMMGG*
Ga0137389_1021956823300012096Vadose Zone SoilMIDPKPKLIAALDNAQEYLDLATSAQDRGEREFYKRIAELYLKIAQELEAMVGE*
Ga0137399_1101740323300012203Vadose Zone SoilMIDPKPKLTAALDNAQEYLDLATSAQDRGEREFYKRIAELYLKIAQELEAIMGE*
Ga0137399_1128775323300012203Vadose Zone SoilGNDPPAAAGVSSMMINPKGKLIAVLGNAQEYIDLAIGAKDRREREFYERIAELYIKIAHELEALIDG*
Ga0137362_1035972023300012205Vadose Zone SoilDPKPKLIEILGNVQEYLDLAASTKDRSEREFYQRIAELYLKIAQELEAMMGG*
Ga0137390_1106350613300012363Vadose Zone SoilRSSSNGGSILMMIDPKPKLIAALGSAQEYIDLATSAKDRGERAFYERIAELYIKIAQELEALVEG*
Ga0137397_1001066533300012685Vadose Zone SoilMIDPKPELIAALGNVQEFLDLAISLQDRSERKFYEPIAELYLKIAQELDAMMGG*
Ga0137397_1006665713300012685Vadose Zone SoilMMIDPKAKLIAVLGNAQEYIDLAIGAEDRGEREFYERIAELYLKIAQELEAMMGG*
Ga0137397_1014370023300012685Vadose Zone SoilMIDPKPKLIAAFGNAQEYLDLAISAQDRGEREFDERIAELYLKIAQELEARLGG*
Ga0137397_1024589133300012685Vadose Zone SoilMIDPKPKLIAALDNAQEYLDLATSAQDRGEREFYKRIAELYLKIAQELEAIMGE*
Ga0137397_1027390213300012685Vadose Zone SoilMMINPKGKLIAVLGNAQEYIDLAIGAKDRREREFYERIAELYIKIAHELEALIDG*
Ga0137397_1101754413300012685Vadose Zone SoilMIDPKAKLIAVLGNAQEYIDLAIGAEDRGEREFYQRIAELYLKIAQELEAMMG
Ga0137394_1075005913300012922Vadose Zone SoilDPQPKLIAALSNAQEYVDLAISAKDRGEREFDERIAELYLKIAQVFEAMMGG*
Ga0137394_1083465933300012922Vadose Zone SoilMIDPKPRLIAALDNAQEYLDLATSAQDRGEREFYKRIAELYLKIAQELEATMGE*
Ga0137416_1042558513300012927Vadose Zone SoilMMIDPKPKLIAALSNAQEYLDLAVSAKDRGEREFYERIAELYLKIAQVLEAMMGG*
Ga0137416_1049758713300012927Vadose Zone SoilMMIDPKPKLIAALGNAQEYIDLATSAKDRGEREFYERIAELYIRIAQELDALVEG*
Ga0137404_1009584133300012929Vadose Zone SoilMIDPKPKLIEILGNLQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG*
Ga0137404_1009799323300012929Vadose Zone SoilMIDPKPKLIAALDNAREYLDLATSAQDRGEREFYKRIAELYLKIAQELEAMMGE*
Ga0137410_1015222743300012944Vadose Zone SoilMIDPKAKLIAVLGNAQEYIDLAIGAEDRGEREFYERIAELYLKIAQELEAMMGG*
Ga0137410_1023480923300012944Vadose Zone SoilMIDPKPELIAALGNVQEYLDLAISLQDRSERKFYEPIAELYLKIAQELDAMMGG*
Ga0137410_1068644113300012944Vadose Zone SoilMMIDPKPKLIAALSNAQEYLDLAISAKDRGEREFYERIAELYLKIAQVFEAMMGG*
Ga0137410_1194868723300012944Vadose Zone SoilMIDPKPKLTAALDNAQEYLDLATSAQDRGEREFYKRIAELYLKIAQELEAMMDG*
Ga0164308_1033940223300012985SoilMMIDPKAKLIDILAMRRNTLISRRTDRGERELYERIVALYLKIAQELETLIDK*
Ga0163162_1015416953300013306Switchgrass RhizosphereMMIDPKAKLIDILGNAQEYLDRATKSTDRGERELYERIVALYLKIAQELETLIDK*
Ga0137418_1001370193300015241Vadose Zone SoilMIDPKPKLIAAFGNAQEYLDLAISAQDRGEREFDERIAELYLKIAQELEAMLGG*
Ga0137418_1029633713300015241Vadose Zone SoilMMIDPKPKLIAALGNAQEYLDLATSAKDRGEREFYERIAELYLKIAQVFEAMMGG*
Ga0137409_1003958223300015245Vadose Zone SoilMIDPKPELIAALGNVQEYLDLAISVQDRSEREFYEPIAELYFKIAQELEAMMGG*
Ga0137409_1006838113300015245Vadose Zone SoilMIDPKPKLIAAFGNAQEYLDLAISAQDRGKREFDERIAELYLKIAQELEAMLGG*
Ga0184610_119170513300017997Groundwater SedimentMINPKPRLKAVLGNAQEYLDLAISAQDRGEREFYERIAKLYLKIAQELEAMMGG
Ga0184626_1001719223300018053Groundwater SedimentMIDSKPRLIAALGNVQEYLDLATSAQDRGEREFYERIAELYLKIAQELEAMMGG
Ga0137408_130394113300019789Vadose Zone SoilMIDPKPKLIEILGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG
Ga0137408_143648123300019789Vadose Zone SoilMIDPKPKLIAALDNAREYLDLATSAQDRGEREFYKRIAELYLKIAQELEAMMGE
Ga0193756_103073613300019866SoilMIDPKPKLIEVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG
Ga0193744_100551023300019874SoilMIDPKPKLIAVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGR
Ga0193747_114217823300019885SoilLMMIDPKPKLIAVLGNAQEYIDLATSAEDRGEREFYERIAELYIKIARELEALVEG
Ga0193727_103891733300019886SoilMIDPKPKLIAALRNAQEYLDLATSAQDRGEREFYKRIAQLYLKIAQELEAMMGE
Ga0193727_118282323300019886SoilLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG
Ga0193729_105628423300019887SoilMMIDPKPKLIAVLGNAQEYIDLATSAEDRGEREFYERIAELYIKIARELEALVEG
Ga0193729_108586813300019887SoilMMIDLKPRLIAALGNAQEYLDLATSAEDRGERAFYERIAELYIKIARELEALVEG
Ga0193729_114457223300019887SoilMMIDPKPKLIAALGNAQEYIDLATSAKDRGERAFYERIAELYIKIAQELEALVEG
Ga0193730_105754223300020002SoilMIIDPKPKLIAVLGNAQEYIDLATSAEDRGEREFYERIAELYIKIARELEALVEG
Ga0193732_101250153300020012SoilMIDPKPKLIAVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGE
Ga0179594_1035522213300020170Vadose Zone SoilMIDPKPKLIEVLGNVQEYLDLAASTKDRSEREFYQRIAELYLKIAQELEAMMGG
Ga0210407_1146993013300020579SoilMMIDPKAKLIDILGNAQEYLDLATKSTDRGERELYERIVALYLKIAQELETLI
Ga0179596_1001087723300021086Vadose Zone SoilMMIDPKPKLIAALGNAQEYLDLATSAKDRGERAFYERIAELYIKIAQELEALVEG
Ga0179596_1020762623300021086Vadose Zone SoilMMIDPKSRLIAALGNAQEYIDLAASAKDRGEREFYERIAELYIRIAQELDALVEG
Ga0210402_1089385623300021478SoilMMIDPKAKLIDILGNAQEYLDLATKSTNRGERQLYERIVALYLKIAQELETLIDK
Ga0179589_1026730333300024288Vadose Zone SoilMIDPKPKLIEVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKI
Ga0207685_1016543613300025905Corn, Switchgrass And Miscanthus RhizosphereMMIDPKAKLIDILGNAQEYLDRATKSTDRGERELYERIVALYLKIAQELETLIDK
Ga0207693_1038812613300025915Corn, Switchgrass And Miscanthus RhizosphereMMIDPKASLIDILGNAQEYLDLATKSTDRGERELYERIVALYLKIAQEFETAVWPAASRRNPR
Ga0207686_1177589713300025934Miscanthus RhizosphereAQEYLDLATKSTDRGERELYERIVALYLKIAQELETLIDK
Ga0207704_1101944913300025938Miscanthus RhizosphereMMIDPKAKLIDILGNAQEYLDLATKSTDRGERELYERIVALYLKIA
Ga0209863_1001368963300026281Prmafrost SoilMMMIDPKPKLIAALGNAQEYIDLATSAKDRGERAFYERIAELYIKIARELEALVEG
Ga0209438_106123613300026285Grasslands SoilMMIDPKPKLIAALSNAQEYLDLAISAKDRGEREFDERIAELYLKIAQVFEAMMGG
Ga0209438_120128023300026285Grasslands SoilMMINPKGKLIAVLGNAQEYIDLAIGAKDRREREFYERIAELYIKIAHELEALIDG
Ga0209890_1001920723300026291SoilMMIDPKPKLIAALGNAQEYIDLATSAKDRGERAFYERIAELYIKIARELEALAEG
Ga0257148_100840833300026345SoilMIDPKPKLIEVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEA
Ga0257180_102652933300026354SoilMIDPKPKLIEVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMIGG
Ga0257149_107106433300026355SoilMIDPKPKLIEVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMM
Ga0257176_103446623300026361SoilMIDPKPRLIAALGNVQEYLDLATSVQDRSEREFYEPIAELYFKIAQELEAMMGG
Ga0257146_104248423300026374SoilMIDPKAKLIAVLGNAQEYIDLAIGAEDRGEREFYERIAELYLKIAQE
Ga0257172_103488623300026482SoilMMIDPKPKLIAALGNAQEYLDLATSAKDRGEREFYERLAQLYLKIAQELEALVEG
Ga0257164_103511613300026497SoilRWHCQTWLDGRGLMIDPKPKLIEVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG
Ga0257161_109506913300026508SoilMMIDPKPKLIAALGNAQEYLDLATSAKDRGEREFYERIAELYLKIAQELEALVEG
Ga0179587_1006988913300026557Vadose Zone SoilMMIDPKPKLIAALGNAQEYLDLATSAKDRGEREFYERIAVLYIKIAQELDALVEG
Ga0179587_1073708913300026557Vadose Zone SoilMMIDPQPKLIAALSNAQEYVDLAISAKDRGEREFDERIAELYLKIAQVFEAMMGG
Ga0179587_1111101423300026557Vadose Zone SoilMIDPKAKLIAVLGNAQEYIDLAIGAEDRGEREFYERIAELYLKIAQELEAMMGG
Ga0209524_101629043300027521Forest SoilMMIDLKPRLIAALGNAQEYLDLATSAKDRGERAFYERIAELYIKIAQELEALVEG
Ga0209734_100707823300027535Forest SoilMIDLKPRLIAALGNAQEYLDLATSAKDRGERAFYERIAELYIKIARELEALVEG
Ga0209220_109387823300027587Forest SoilMIDPKPKLIAALGNAQEYLDLAISAQDRGEREFYKRIAELYLKIAQELDAMMGE
Ga0209217_105874723300027651Forest SoilMMIDPKPKLIAALGNAQEYIDLATSAQDRGEREFYERIAELYIKIAQELEVLVEG
Ga0209388_109298823300027655Vadose Zone SoilMIDPKPKLIAALDNAQEYLDLATSAQDRGEREFYKRIAELYLKIAQELEAMMGE
Ga0208981_117294913300027669Forest SoilIAALGNAQEYLDLATSAKDRGEREFYERIAVLYIKIAQELDALVEG
Ga0209588_100080733300027671Vadose Zone SoilMIDPKPRLIAALGNVQEYLDLAISVQDRSEREFYEPIAELYFKIAQELEAMMGG
Ga0209011_101566143300027678Forest SoilMIDPKPKLIAALGNAQEYLDLAISAQDRGERAFYKRIAELYLKIAQELDAMMGE
Ga0209328_1008730813300027727Forest SoilMMIDPKPKLIAALGNAQEYIDLAISAQDRGEREFYERIAELYLKIAQDLEAMMGG
Ga0209068_1012887823300027894WatershedsMIDPKPKLIAVLGNAQEYLDLAESTKDRDEREFYQRIAELYLKIAQELEAMMDG
Ga0209068_1021764433300027894WatershedsMIDPKPRLIAVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMMGG
Ga0209526_1003949633300028047Forest SoilMMIDLKPRLIAALGNAQEYLDLATSAKDRGERAFYERIAELYIKIARELEALVEE
Ga0209526_1063623323300028047Forest SoilMMIDPKPKLIAALGNAQEYIDLATSAQDRGEREFYERIAELYIKIAQELEALVEG
Ga0307504_1003425913300028792SoilMIDPKPKLIAVLGNVQEYLDLAASTKDRDEREFYQRIAELYLKIAQELEAMMGG
Ga0307504_1023076113300028792SoilMIDPKPRLIAVLGNVQEYLDLASSTKDRGEREFYQRIAELYLKIAQELEAMMGG
Ga0307310_1019848023300028824SoilMIDPKPKLIAVLGNVQEYLDLAASTKDRGEREFYQRIAELYLKIAQELEAMLSG
Ga0170824_11991513633300031231Forest SoilMMIDPKAKLVDVLGNAQEYLDLATKSTDRGERELYERIVALYLKIAQELETLIDK
Ga0170820_1042242713300031446Forest SoilMMIDPKAKLVDVLGNAQEYLDLATKSTDRGERELYERIVALYLKIARPPQRLMIADL
Ga0170818_11437837933300031474Forest SoilMMIDPKAKLVDVLGNAQEYLDLATKSTDRGERELYERIVALHLKIAQELETLIDK
Ga0310686_10558974913300031708SoilMIDIRAKLVDALDHAQEYLDLAIKAQDRGEREFYERICELYMRIAQELRRRSTNRLCRPT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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