NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F072794

Metagenome / Metatranscriptome Family F072794

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072794
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 55 residues
Representative Sequence YRPFRLAPAALILLLIATVMSTEHQRLIKIGFAMVGICFVVGAALQVLTHHPLY
Number of Associated Samples 108
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 14.16 %
% of genes near scaffold ends (potentially truncated) 79.34 %
% of genes from short scaffolds (< 2000 bps) 89.26 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (85.950 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.570 % of family members)
Environment Ontology (ENVO) Unclassified
(37.190 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(48.760 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 51.22%    β-sheet: 0.00%    Coil/Unstructured: 48.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF160782-oxogl_dehyd_N 51.24
PF00676E1_dh 4.96
PF16870OxoGdeHyase_C 2.48
PF00296Bac_luciferase 1.65
PF02627CMD 0.83
PF01609DDE_Tnp_1 0.83
PF13280WYL 0.83
PF04828GFA 0.83
PF03176MMPL 0.83
PF02779Transket_pyr 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG05672-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymesEnergy production and conversion [C] 4.96
COG1071TPP-dependent pyruvate or acetoin dehydrogenase subunit alphaEnergy production and conversion [C] 4.96
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.65
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.83
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.83
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.83
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.83
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.83
COG3293TransposaseMobilome: prophages, transposons [X] 0.83
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.83
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.83
COG5421TransposaseMobilome: prophages, transposons [X] 0.83
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.83
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.95 %
UnclassifiedrootN/A14.05 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001535|A3PFW1_10288649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria582Open in IMG/M
3300001538|A10PFW1_11544894All Organisms → cellular organisms → Bacteria1734Open in IMG/M
3300004799|Ga0058863_11543354All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300005093|Ga0062594_101378705All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300005176|Ga0066679_10939051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300005329|Ga0070683_101700352All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005339|Ga0070660_101571244All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005341|Ga0070691_10209493All Organisms → cellular organisms → Bacteria1028Open in IMG/M
3300005344|Ga0070661_100308818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1233Open in IMG/M
3300005344|Ga0070661_100547670All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300005355|Ga0070671_100902260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria772Open in IMG/M
3300005439|Ga0070711_101399711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium608Open in IMG/M
3300005451|Ga0066681_10479267All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300005455|Ga0070663_100866480All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005456|Ga0070678_100640115All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300005467|Ga0070706_101000221All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300005468|Ga0070707_101117773All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300005530|Ga0070679_101263739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium684Open in IMG/M
3300005530|Ga0070679_101992694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria530Open in IMG/M
3300005544|Ga0070686_100262389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1267Open in IMG/M
3300005557|Ga0066704_10685790All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005578|Ga0068854_100794115Not Available824Open in IMG/M
3300005614|Ga0068856_101282535All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300005900|Ga0075272_1072824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300006028|Ga0070717_11410929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium632Open in IMG/M
3300006163|Ga0070715_10273152All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300006173|Ga0070716_101099881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium634Open in IMG/M
3300006755|Ga0079222_11305931All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300006800|Ga0066660_11483668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium533Open in IMG/M
3300009098|Ga0105245_10326262All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300009098|Ga0105245_10471410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1267Open in IMG/M
3300009101|Ga0105247_11689202All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300009137|Ga0066709_101241165All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300009177|Ga0105248_10420884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1504Open in IMG/M
3300009551|Ga0105238_12095271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria600Open in IMG/M
3300009650|Ga0105857_1048564All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300009660|Ga0105854_1178308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium697Open in IMG/M
3300010152|Ga0126318_10353088All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300010229|Ga0136218_1025056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria682Open in IMG/M
3300010371|Ga0134125_12538671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300010397|Ga0134124_13218291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300012208|Ga0137376_11232554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium638Open in IMG/M
3300012357|Ga0137384_11108514All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300012362|Ga0137361_11419074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300012685|Ga0137397_10160236All Organisms → cellular organisms → Bacteria1669Open in IMG/M
3300012924|Ga0137413_10778189All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300012927|Ga0137416_11742558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria569Open in IMG/M
3300012931|Ga0153915_10028683Not Available5561Open in IMG/M
3300012951|Ga0164300_10274702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria868Open in IMG/M
3300012951|Ga0164300_10989724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300012957|Ga0164303_11377674All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300012958|Ga0164299_10613782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium746Open in IMG/M
3300012961|Ga0164302_10676145All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300012961|Ga0164302_10734414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria736Open in IMG/M
3300012988|Ga0164306_10206340All Organisms → cellular organisms → Bacteria1382Open in IMG/M
3300012989|Ga0164305_10750676All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300012989|Ga0164305_11808264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria552Open in IMG/M
3300013104|Ga0157370_10732993All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300013105|Ga0157369_10327413All Organisms → cellular organisms → Bacteria1592Open in IMG/M
3300013105|Ga0157369_10862108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria929Open in IMG/M
3300013297|Ga0157378_10429901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1307Open in IMG/M
3300013308|Ga0157375_11239432All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300013768|Ga0120155_1194341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300013770|Ga0120123_1168429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium524Open in IMG/M
3300014497|Ga0182008_10056078All Organisms → cellular organisms → Bacteria1948Open in IMG/M
3300015242|Ga0137412_10789208All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300015373|Ga0132257_104353026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300016371|Ga0182034_11309103All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300017961|Ga0187778_11271537Not Available517Open in IMG/M
3300017974|Ga0187777_10656914All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300019890|Ga0193728_1137647All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300019890|Ga0193728_1328290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria563Open in IMG/M
3300020070|Ga0206356_11886543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria717Open in IMG/M
3300020075|Ga0206349_1499605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300020082|Ga0206353_11240181Not Available3334Open in IMG/M
3300021363|Ga0193699_10071075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1375Open in IMG/M
3300021377|Ga0213874_10251845All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300025905|Ga0207685_10376737All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300025910|Ga0207684_10245275All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300025911|Ga0207654_10706635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300025912|Ga0207707_10534000All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300025917|Ga0207660_11192323All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300025921|Ga0207652_10589908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium997Open in IMG/M
3300025927|Ga0207687_11067307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium693Open in IMG/M
3300025928|Ga0207700_11976067All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300025929|Ga0207664_10922865All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300025981|Ga0207640_11848877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300026067|Ga0207678_10617793All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300026067|Ga0207678_10937194Not Available766Open in IMG/M
3300026078|Ga0207702_10056063Not Available3344Open in IMG/M
3300026078|Ga0207702_12287727All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300026121|Ga0207683_10560868All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300026121|Ga0207683_11584507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300027388|Ga0208995_1049564Not Available739Open in IMG/M
3300027460|Ga0207506_1019798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300027902|Ga0209048_11093864Not Available505Open in IMG/M
3300028536|Ga0137415_11285332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium549Open in IMG/M
3300030838|Ga0311335_11100910All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300031239|Ga0265328_10435210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300031668|Ga0318542_10457566All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300031671|Ga0307372_10580669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium507Open in IMG/M
3300031747|Ga0318502_10331003All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300031751|Ga0318494_10126252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1428Open in IMG/M
3300031831|Ga0318564_10433446All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300031912|Ga0306921_11073373All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300031939|Ga0308174_10080073All Organisms → cellular organisms → Bacteria2294Open in IMG/M
3300031939|Ga0308174_11719426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300032074|Ga0308173_10243493All Organisms → cellular organisms → Bacteria1519Open in IMG/M
3300032074|Ga0308173_10472083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1118Open in IMG/M
3300032205|Ga0307472_102671508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300032770|Ga0335085_10222601Not Available2292Open in IMG/M
3300032898|Ga0335072_11097085All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300034268|Ga0372943_0350267All Organisms → cellular organisms → Bacteria946Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.26%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.13%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.48%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.48%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.65%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.65%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.65%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.83%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.83%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.83%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.83%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.83%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.83%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.83%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.83%
SoilEngineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001535Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005900Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009650Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061EnvironmentalOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010229Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1EngineeredOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027460Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030838I_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300031239Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaGHost-AssociatedOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031671Soil microbial communities from Risofladan, Vaasa, Finland - OX-1EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A3PFW1_1028864923300001535PermafrostMAACALFLGALELVYRPFRLAPAAVILALIATVMSRDQQRLIMLAFAMIGVCFVVGAALQILTHHPLY*
A10PFW1_1154489443300001538PermafrostMAAGALFVGALELVYRPFRLAPAALILALVATVMSRDQQRLIALAIAVIGICFVVGAALQILTHHPLY*
Ga0058863_1154335423300004799Host-AssociatedMAAGALFLGAFELLYRPFRLAPAALILLLVATIMSREQQRLIQVAFAVVGICFVAGAALQILTHHPLF*
Ga0062594_10137870513300005093SoilLELVYRPFRLAPAALILALIATVMSREQPRTIPIAYAMIGICFVVGAALQVWTKHPLF*
Ga0066679_1093905123300005176SoilMAAGAIFLGGFELFYRPFRLAPAALLLLLVATVMSTEQHRLIKFGFAMVGICFIAGAALQILTHHPLY*
Ga0070683_10170035223300005329Corn RhizosphereACALFLGAIELVYRPFRLAPVAVILLLFATVMTTRQQRLVGIGFAVVGVCFVVGAALQVLTKHPLY*
Ga0070660_10157124423300005339Corn RhizosphereASLAIFVGALELVYRPFRLAPAALILALIATVMSREQPRVIPVAYAMIGICFIVGATLQIITHHPLF*
Ga0070691_1020949313300005341Corn, Switchgrass And Miscanthus RhizosphereLAAIAIFVGALELVYRPFRLAPAALILALIATVMSREQPRTIPIAYAMIGVCFVVGAALQVWTKHPLF*
Ga0070661_10030881813300005344Corn RhizosphereLFIGCLELFYRPFRLVPVAVVLLLVATVMSRDQQRLVKIGFAAAGICFVAGAALQVITHHPLY*
Ga0070661_10054767023300005344Corn RhizosphereLGCLELFYRPFRLVPVAVVLLLVATVMSRDQQRLVKIGFAAAGIGFVAGAALQVITHHPLY*
Ga0070671_10090226023300005355Switchgrass RhizosphereMAAGALFLGAFELVYRPFRLAPAAVILLICATLMTERQQRLVGIGFAVVGVCFVVGASLQVLTKHPLF*
Ga0070711_10139971123300005439Corn, Switchgrass And Miscanthus RhizosphereLAPVAVILLLIATVMSQRQQRLIGIGFAVVGICFVVGAALQVLTKHPLY*
Ga0066681_1047926723300005451SoilAPAAVILLLVATVMSRRQQRLIGLAYAVVGVCFVAGAALQVWTKHPLF*
Ga0070663_10086648023300005455Corn RhizosphereLILLLIATVMSKRQQRLIGLAFAVVGVCFVVGAALQVLTKHPLY*
Ga0070678_10064011523300005456Miscanthus RhizosphereFRLAPAALILLLIATVMSTEHQRLIKIGFAMVGICFVVGAALQVLTHHPLY*
Ga0070706_10100022113300005467Corn, Switchgrass And Miscanthus RhizosphereALFIGFLELFYRPFRLAPVAVILLLVATVMSQRQQRLIGLAFAVVGICFVVGAALQVVTKHPIF*
Ga0070707_10111777323300005468Corn, Switchgrass And Miscanthus RhizosphereAVILLLFATVMTQRQQRLVGIGFAVVGVCFVVGAALQVLTKHPLY*
Ga0070679_10126373913300005530Corn RhizosphereAPAALILALIATVMSREQPRVIPVAFATIGICFITGATLQILTHHPLF*
Ga0070679_10199269423300005530Corn RhizosphereMAAGALFLGAFELLYRPFRLAPAALILLLAATIMSREQQRLIQVAFAVVGICFVAGAALQLLTHHPLF*
Ga0070686_10026238923300005544Switchgrass RhizosphereLELVYRPFRLAPAALILALIATVMSREQPRTIPIAYAMIGVCFVVGAALQVWTKHPLF*
Ga0066704_1068579013300005557SoilVATVMSTRQQRLIALGFAVVGVCFVAGAAIQVLTHHPLF*
Ga0068854_10079411513300005578Corn RhizosphereLFYRPFRLVPVAVVLLLVATVMSRDQQRLVKIGFAAAGICFVAGAALQVITHHPLY*
Ga0068856_10128253523300005614Corn RhizosphereACALFLGALELVYRPFRLAPVAVILLLFATVMTQRQQRLVGIGFAVVGVCFVVGAALQVLTKHPLY*
Ga0075272_107282423300005900Rice Paddy SoilLILVLMATVMSKRQHRLIGLAAVVVGVCFVIGAAVQVYLQHPLY*
Ga0070717_1141092913300006028Corn, Switchgrass And Miscanthus RhizosphereAVILLLIATVMSQRQQRLIGIGFAVVGICFVVGAALQVLTKHPLY*
Ga0070715_1027315213300006163Corn, Switchgrass And Miscanthus RhizosphereFRLAPVAVVLLLIATIMSREQPRLIPIGWAVVGICFILGATLQILTHHPLF*
Ga0070716_10109988113300006173Corn, Switchgrass And Miscanthus RhizosphereLILALIATVMSREQPRTIPIAYAMIGICFVVGAALQVWTKHPLF*
Ga0079222_1130593123300006755Agricultural SoilLLVATVMSKRQQRLIALGFAVVGVCFVAGAALQVWTKHPLF*
Ga0066660_1148366823300006800SoilAPAAPLLAIVATVMSRAQPRILPLAYVTIGVCFVAGAALQIITHHPLY*
Ga0105245_1032626223300009098Miscanthus RhizospherePFRLAPAAVILLICATLMTERQQRLVGIGFAVVGVCFVVGASLQVLTKHPLF*
Ga0105245_1047141023300009098Miscanthus RhizosphereYRPFRLAPAALILLLIATVMSTEHQRLIKIGFAMVGICFVVGAALQVLTHHPLY*
Ga0105247_1168920223300009101Switchgrass RhizospherePAGVILILIATIMSERQQKLIAAALAVVGICFVVGAALQVWTHHPLF*
Ga0066709_10124116513300009137Grasslands SoilVATVMSTRQQRLIAFGFAVVGVCFVAGAAIQVLTHHPLF*
Ga0105248_1042088413300009177Switchgrass RhizosphereGAFELFYRPFRLAPAAVILLLFATVMTQRQQRLVGIGFAVVGICFVVGATLQVWTKHPLF
Ga0105238_1209527113300009551Corn RhizosphereLGAMELLYRPFRLAPAALILLLVATVMSREQQRLIRLGFAVVGICFITGATLQILTHHPLF*
Ga0105857_104856423300009650Permafrost SoilYRPFRLAPAALILALVATVMSRDQQRLIALAIAVIGICFIVGATLQILTHHPLY*
Ga0105854_117830813300009660Permafrost SoilFRLAPVAVVFLLIATVMSKDQQRLVAIGFAVVGVGFVAGAALQVITHHPLY*
Ga0126318_1035308823300010152SoilLAPAALILLLVATLMGSPQQQRLVRIAFAVVGICCVAGAALQIITHHPLF*
Ga0136218_102505623300010229SoilXGCLELFYRPFRLVPVAVVLLLVATVMSRDQQRLVKIGFAAAGICFVAGAALQVITHHPLY*
Ga0134125_1253867123300010371Terrestrial SoilLAAASLFLGALELAYRPFRLAPAALVLLLIATVMSRRQQRLIALATAIVGVCFVAGAALQVITNHPLY*
Ga0134126_1136385513300010396Terrestrial SoilTVMSERQQKLIAVAFAVVGICFVVGAALQVSTHHPLF*
Ga0134124_1321829123300010397Terrestrial SoilLELFYRPFRLAPVALLLALIATIMSREQPRIIPLAYTMIGVCFVAGAALQVITHHPLY*
Ga0137776_184312113300010937SedimentALIATVMSRRHQRLTGVAIAVIGVCFVVGASLQVITHHPLY*
Ga0137376_1123255423300012208Vadose Zone SoilFLGVMELLYRPFRLAPAALILLLIATVMSTEQQRLIKLGFAAVGIGFVAGATLQLLTHHPLY*
Ga0137384_1110851423300012357Vadose Zone SoilLILLLVATVMSRRQQRLIALGFAVVGVCFVSGAAIQVLTHHPLF*
Ga0137361_1141907413300012362Vadose Zone SoilLAPVALLLAIVATVMSREQPRIIPLAYAMIGVCFVAGAALQVITHHPLY*
Ga0137397_1016023623300012685Vadose Zone SoilFRLAPAALLLAIIATVMSREQPRIIPLAYVVIGVCFVAGAALQIITHHPLY*
Ga0137413_1077818913300012924Vadose Zone SoilYRPFRLAPAALILALVATVMSREQPRVIPVAFAMIGICFITGATLQIITHHPLY*
Ga0137416_1174255823300012927Vadose Zone SoilGALFLGFFELVYRPFRLVPVALILLLAATVMSERQQRLIALAFAVIGICFVAGAALQVLAHHPLY*
Ga0153915_1002868353300012931Freshwater WetlandsMAAGALFLGALELVYRPFRLAPAALILLLAATVMSRDQQRLIRLGFAVVGICFIAGAALQVLTRHPLF*
Ga0164300_1027470223300012951SoilMAAGAMFLGFFELFYRPFRLAPVAVVLLLFATVMSERQQRLIALSFAVVGVCFVVGAGIQVSTHHPLF*
Ga0164300_1098972423300012951SoilELVYRPFRLAPAALILALIATVMSREQPRTIPIAYAMIGICFVVGAALQVWTKHPLF*
Ga0164303_1137767413300012957SoilPAALILLLIATVMSTEHQRLIKIGFAMVGICFVVGAALQVLTHHPLY*
Ga0164299_1061378223300012958SoilMAAGAMFLGFFELFYRPFRLAPVAVVLVLFTTMMSERQQRLIALSFAVVGVCFVVGAGIQVSTHHPLF*
Ga0164302_1067614513300012961SoilPVAVILLLIATVMSTRHQRLIAFEFAMVGICFVIGAAIQVLTHHPLY*
Ga0164302_1073441423300012961SoilYRPFRLAPAALILALIATVMSREQPRVIPVAYATIGICFITGAALQILTHHPLY*
Ga0164308_1179649313300012985SoilTQRQQRLVGIGFAVVGICFVVGATLQVWTKHPLF*
Ga0164306_1020634033300012988SoilMAAGAMFLGFFELFYRPFRLAPVAVVLLLFATVMSERQQRLVALSFAVVGVCFVVGAAIQVSTHHPLF*
Ga0164305_1075067623300012989SoilRLVPVAVILLLIATVMSTRHQRLIAFGFAVVGICFVIGAAIQVLTHHPLY*
Ga0164305_1180826413300012989SoilMAAGAMFLGFFELFYRPFRLAPVAVVLLLFATVMSERQQRLIALSFAVVGVCFVVGAAIQVSTHHPLF*
Ga0157370_1073299323300013104Corn RhizosphereAAVVLALVATVMSKEQQRLITLALVVVGVCFVVGAALQVITNHPLY*
Ga0157369_1032741313300013105Corn RhizosphereRPFRLAPAALILLLVATIMSREQQRLIQVAFAVVGICFVAGAALQILTHHPLF*
Ga0157369_1086210823300013105Corn RhizosphereLELVYRPFRLAPAALILALIATVMSREQPRVIPVAFATIGICFITGATLQILTHHPLF*
Ga0157378_1042990123300013297Miscanthus RhizosphereGLMELLYRPFRLAPAALILLLIATVMSTEHQRLIKIGFAMVGICFVVGAALQVLTHHPLY
Ga0157375_1123943223300013308Miscanthus RhizosphereAPAALILLLIATVMSTEHQRLIKIGFAMVGICFVVGAALQVLTHHPLY*
Ga0120155_119434123300013768PermafrostAGALFLGALELVYRPFRLAPAALILALVATVMSREQHRLIALAIAVIGICFVVGAALQVLTHHPLY*
Ga0120123_116842923300013770PermafrostLAVCGLFLGLLELFYRPFRLAPAAVILLIVATVMSRSQHRLIKLGFAAVGICFVAGAALQVITHHPLY*
Ga0182008_1005607813300014497RhizosphereLELFYRPFRLVPAAVVLLVVATVMSRDQQRLIKIGFAVTGICFVAGAALQVITHHPLY*
Ga0137412_1078920813300015242Vadose Zone SoilYRPFRLAPAALILALVATVMSREQPRVIPVAFAMIGICFITGATLQILTHHPLY*
Ga0132257_10435302613300015373Arabidopsis RhizosphereMELFYRPFRLAPLAVILLLVATVMSTRQQRLIGLGFAVVGICFVAGAGIQVLVHHPLF*
Ga0182034_1130910313300016371SoilLFLGLLELVYRPFRLAPVALILVLIATVMSRRHQRLTGIAVAVIGVCFVVGASLQVITHHPLF
Ga0187778_1127153723300017961Tropical PeatlandGLRFRDAAALFLGALELVYRPFRLAPVALILVLIATVMSRRHHRLTGIAIAVIGVCFVVGASLQVITHHPLY
Ga0187777_1065691423300017974Tropical PeatlandELFYRPFRLAPVALVLLLIATVMSREQQRLIRISFAVVGVCFVAGAALQVTTHHPLF
Ga0193728_113764723300019890SoilLAASALFLGFLELAYRPFRLAPAAVILLLVATVMSRRQQRLIALGFAVVGICFVVGAALQVLVKHPLY
Ga0193728_132829023300019890SoilMAACALFLGALELAYRPFRLAPAAAILALIATVMSRDQQRLIMLAFTVIGVCFVVGAALQILTHHPLY
Ga0206356_1188654323300020070Corn, Switchgrass And Miscanthus RhizosphereMAAGALFLGAFELLYRPFRLAPAALILLLVATIMSREQQRLIQVAFAVVGICFVAGAALQILTHHPLF
Ga0206349_149960513300020075Corn, Switchgrass And Miscanthus RhizosphereIFLGGLELVYRPFRLAPAAVILAIAATAMSREQPKVIPVAYAMIGICFIVGATLQIITHHPLF
Ga0206353_1124018133300020082Corn, Switchgrass And Miscanthus RhizosphereLAPAALILLLVATIMSREQQRLIQVAFAVVGICFVAGAALQILTHHPLF
Ga0193699_1007107523300021363SoilIAIFVGALELVYRPFRLAPAALILALIATVMSREQPRVIPVAFAMIGICFITGATLQILTHHPLY
Ga0213874_1025184513300021377Plant RootsATVMTAEQQRLIRLGFAVVGICFIVGAALQVLTHHPLY
Ga0207685_1037673723300025905Corn, Switchgrass And Miscanthus RhizospherePFRLAPAALILALIATVMSREQPRTIPIAYAMIGICFVVGAALQVWTKHPLF
Ga0207684_1024527523300025910Corn, Switchgrass And Miscanthus RhizosphereLFIGFLELFYRPFRLAPVAVILLLVATVMSQRQQRLIGLAFAVVGICFVVGAALQVVTKHPIF
Ga0207654_1070663513300025911Corn RhizosphereGALELVYRPFRLAPAALILALIATVMSREQPRVIPVAFATIGICFITGATLQILTHHPLF
Ga0207707_1053400023300025912Corn RhizosphereALFLGAFELLYRPFRLAPAALILLLVATIMSREQQRLIQVAFAVVGICFVAGAALQILTHHPLF
Ga0207660_1119232313300025917Corn RhizosphereAVILLLVATVMSNEQQRLIRIAFLVVGVCFVTGAALQVITHHPLF
Ga0207652_1058990823300025921Corn RhizosphereLAPAALILLLAATIMSREQQRLIQVAFAVVGICFVAGAALQLLTHHPLF
Ga0207687_1106730723300025927Miscanthus RhizospherePFRLAPAAVILLICATLMTERQQRLVGIGFAVVGVCFVVGASLQVLTKHPLF
Ga0207700_1197606723300025928Corn, Switchgrass And Miscanthus RhizosphereLGGLELLYRPFRLAPAALILALVATVMSREQPKLIPVAYAMIGVCFIVGATLQILTHHPL
Ga0207664_1092286513300025929Agricultural SoilAALILLLIATVMSTEHQRLIKIGFAMVGICFVVGAALQVLTHHPLY
Ga0207640_1184887713300025981Corn RhizosphereFLGGLELVYRPFRLAPAAVILAIAATAMSREQPKVIPVAYAMIGICFIVGATLQIITHHPLF
Ga0207678_1061779323300026067Corn RhizosphereFRLAPAALILLLIATVMSKRQQRLIGLAFAVVGVCFVVGAALQVLTKHPLY
Ga0207678_1093719423300026067Corn RhizosphereYRPFRLAPAAVILLICATLMTERQQRLVGIGFAVVGVCFVVGASLQVLTKHPLF
Ga0207702_1005606343300026078Corn RhizosphereVMSKRQQRLIGLAFAVVGVCFVVGAALQVLTKHPLY
Ga0207702_1228772723300026078Corn RhizosphereCALFLGALELLYRPFRLAPVAVILLLFATVMTQRQQRLVGIGFAVVGVCFVVGAALQVLTKHPLY
Ga0207683_1056086813300026121Miscanthus RhizosphereLGLMELLYRPFRLAPAALILLLIATVMSTEHQRLIKIGFAMVGICFVVGAALQVLTHHPL
Ga0207683_1158450713300026121Miscanthus RhizosphereALILLLIATVMTQRQQRLVGFAFAVVGICFVAGAALQVLTKHPLY
Ga0208995_104956423300027388Forest SoilYRPFRLAPAAAVLVVIATVMSREQPKTIPVAYATIGICFIVGATLQILTHHPLY
Ga0207506_101979813300027460SoilPAALILALIATVMSREQPRVIPVAFATIGICFITGATLQILTHHPLF
Ga0209048_1109386413300027902Freshwater Lake SedimentFFYRPFRLAPAAVIMLVIATVMSREQHRLIKAAFALVGIGFVVGASIQVAIHHPLY
Ga0137415_1128533213300028536Vadose Zone SoilRLVPVALILLLAATVMSERQQRLIALAFAVIGICFVAGAALQVLAHHPLY
Ga0311335_1110091013300030838FenFRLAPAALILLIIATVMSREQQGLIKVAYAAVGIGFVVGASIQILTHHPLY
Ga0265328_1043521023300031239RhizosphereGGFELLYRPFRLAPAAVLMLLIATVMSSEQHRLIKLSFAVVGIGFVVGAPIQILTHHPLY
Ga0318534_1060537413300031544SoilFRLAPVALILVLIATVMSRRHQRLTGIAVAVIGVCFVVGASLQVITHHPLF
Ga0318542_1045756623300031668SoilLGLLELVYRPFRLAPVALILVLIATVMSRRHQRLTGIAVAVIGVCFVVGASLQVITHHPL
Ga0307372_1058066923300031671SoilFRLAPAAVIMLLVATVMSSEQHRLIKVGFAVVGICFVVGAPLQILTHHPLY
Ga0318502_1033100313300031747SoilLFIGFFELFYRPFRLFPIAVVLLLVATVMSREHQRLIAIALAVVGICFVIGAALQVATNHPLY
Ga0318494_1012625243300031751SoilVAALFLGLLELVYRPFRLAPVALILVLIATVMSRRHQRLTGIAVAVIGVCFVVGASLQVITHHPLF
Ga0318521_1063414723300031770SoilLVLIATVMSRRHQRLTGIAVAVIGVCFVVGASLQVITHHPLF
Ga0318564_1043344623300031831SoilVYRPFRLAPVALILVLIATVMSRRHQRLTGIAVAVIGVCFVVGASLQVITHHPLF
Ga0306921_1107337323300031912SoilAAAALFLGLLELVYRPFRLAPVALILVLIATVMSRRHQRLTGIAVAVIGVCFVVGASLQVITHHPLF
Ga0308174_1008007323300031939SoilMAAGALFLGAFELLYRPFRLAPAALILLLVATIMSREQQRLIQFAFAVVGICFVAGAALQILTHHPLF
Ga0308174_1171942623300031939SoilAVMSNEQQRLVRVGFVLVGVCFVAGAALQVITHHPLF
Ga0308173_1024349313300032074SoilLAPVAVILLLFATVMTQRQQRLVGIGFAVVGICFVVGAALQVWTKHPLF
Ga0308173_1047208323300032074SoilMAAGALFLGGFELLYRPFRLAPAALILLLAATIMSREQQRLIQVGFAVVGICFVAGAALQLLTHHPLF
Ga0318518_1009887453300032090SoilLILVLIATVMSRRHQRLTGIAVAVIGVCFVVGASLQVITHHPLF
Ga0307472_10267150813300032205Hardwood Forest SoilLGVMELLYRPFRLAPAALILLLIATVMSTEQQRLIKLGFAAVGICFVAGAALQVLTHHPL
Ga0335085_1022260113300032770SoilELVYRPFRLAPVALILVLVATVMSRRHHRLTGIAIAVIGVCFVVGASLQVITHHPLY
Ga0335072_1109708523300032898SoilLLLIATVMSGPQQRLVRVGFALTAICFVAGAAIQVLTHHPLY
Ga0310810_1050904213300033412SoilMSRDQQRLVKIGFAATGICFVVGAALQVITHHPLY
Ga0326726_1164198623300033433Peat SoilVATVMSRRHQRLASIAIAVIGVCFVVGASLQVITRHPLY
Ga0372943_0350267_821_9463300034268SoilLLIATVMSTQYTRLIRVGFVLLGVCFVAGAALQILTHHPLY

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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