Metagenome / Metatranscriptome Family F072804

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072804
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	87 residues
Representative Sequence	MAAGNGGQKGTSGLPGPLRRFADRLDEVRSADVVDMDQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLV
Number of Associated Samples	105
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.33 %
% of genes near scaffold ends (potentially truncated)	91.74 %
% of genes from short scaffolds (< 2000 bps)	87.60 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.289 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.454 % of family members)
Environment Ontology (ENVO)	Unclassified (54.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.74% β-sheet: 0.00% Coil/Unstructured: 59.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF02604	PhdYeFM_antitox	7.44
PF00293	NUDIX	6.61
PF00196	GerE	5.79
PF13561	adh_short_C2	4.96
PF01569	PAP2	3.31
PF07730	HisKA_3	3.31
PF00202	Aminotran_3	2.48
PF02627	CMD	1.65
PF04087	DUF389	1.65
PF07690	MFS_1	1.65
PF00795	CN_hydrolase	0.83
PF04199	Cyclase	0.83
PF00578	AhpC-TSA	0.83
PF07992	Pyr_redox_2	0.83
PF00479	G6PD_N	0.83
PF00005	ABC_tran	0.83
PF06897	DUF1269	0.83
PF02518	HATPase_c	0.83
PF08240	ADH_N	0.83
PF00884	Sulfatase	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	7.44
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	7.44
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	3.31
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	3.31
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	3.31
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	3.31
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.65
COG1808	Uncharacterized membrane protein AF0785, contains DUF389 domain	Function unknown [S]	1.65
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.65
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.83
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.83
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.29 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.29 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.29 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.80 %
Unclassified	root	N/A	34.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.32 %
Unclassified	root	N/A	34.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.27 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	6.61 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	4.13 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.48 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.65 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	6.61 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	4.13 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.65 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	1.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Hamadaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea	4.96 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	4.13 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Couchioplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes	1.65 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	1.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Hamadaea flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	4.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1.65 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	1.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
unclassified Actinospica	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica	0.83 %
unclassified Amycolatopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis	0.83 %
Frankia coriariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia coriariae	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Hamadaea flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	4.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1.65 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	1.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.65 %
Actinospica sp. MGRD01-02	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	0.83 %
Amycolatopsis sp. DSM 110486	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. DSM 110486	0.83 %
Frankia coriariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia coriariae	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ01CWZNC	Not Available	525	Open in IMG/M
3300005353\|Ga0070669_101609253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	566	Open in IMG/M
3300005435\|Ga0070714_101301476	Not Available	709	Open in IMG/M
3300005436\|Ga0070713_102385777	Not Available	512	Open in IMG/M
3300005468\|Ga0070707_102134181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	528	Open in IMG/M
3300005617\|Ga0068859_102585139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	559	Open in IMG/M
3300005719\|Ga0068861_100262602	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300005764\|Ga0066903_101428560	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300005842\|Ga0068858_102440499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	517	Open in IMG/M
3300006086\|Ga0075019_10793134	Not Available	603	Open in IMG/M
3300006163\|Ga0070715_10012449	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3097	Open in IMG/M
3300006175\|Ga0070712_100898360	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300006573\|Ga0074055_11568011	Not Available	548	Open in IMG/M
3300006755\|Ga0079222_11216061	Not Available	676	Open in IMG/M
3300006904\|Ga0075424_101811016	Not Available	646	Open in IMG/M
3300006954\|Ga0079219_10749813	Not Available	755	Open in IMG/M
3300009101\|Ga0105247_10640357	Not Available	793	Open in IMG/M
3300009148\|Ga0105243_12327073	Not Available	573	Open in IMG/M
3300009177\|Ga0105248_12230621	Not Available	623	Open in IMG/M
3300009792\|Ga0126374_10967890	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300010361\|Ga0126378_12191673	Not Available	630	Open in IMG/M
3300010362\|Ga0126377_12111643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300010362\|Ga0126377_12277107	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300010371\|Ga0134125_11634677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	701	Open in IMG/M
3300010376\|Ga0126381_101878518	Not Available	864	Open in IMG/M
3300012986\|Ga0164304_10426714	Not Available	949	Open in IMG/M
3300013105\|Ga0157369_10659200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1079	Open in IMG/M
3300013105\|Ga0157369_11654983	Not Available	651	Open in IMG/M
3300016270\|Ga0182036_10592725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300016270\|Ga0182036_10897710	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300016294\|Ga0182041_10327678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1279	Open in IMG/M
3300016319\|Ga0182033_10797998	Not Available	832	Open in IMG/M
3300016341\|Ga0182035_10837689	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300016387\|Ga0182040_11059340	Not Available	678	Open in IMG/M
3300016404\|Ga0182037_11931978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	529	Open in IMG/M
3300016404\|Ga0182037_11970235	Not Available	524	Open in IMG/M
3300016422\|Ga0182039_10746245	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300016422\|Ga0182039_11834076	Not Available	556	Open in IMG/M
3300017924\|Ga0187820_1265588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	555	Open in IMG/M
3300017924\|Ga0187820_1330670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300017972\|Ga0187781_10976025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300018060\|Ga0187765_11213535	Not Available	530	Open in IMG/M
3300021171\|Ga0210405_10966496	Not Available	644	Open in IMG/M
3300021401\|Ga0210393_10727634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	809	Open in IMG/M
3300021403\|Ga0210397_11079317	Not Available	624	Open in IMG/M
3300021474\|Ga0210390_10480565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300025911\|Ga0207654_11299781	Not Available	530	Open in IMG/M
3300028380\|Ga0268265_10730615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia coriariae	959	Open in IMG/M
3300029636\|Ga0222749_10705157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300031057\|Ga0170834_107453515	Not Available	619	Open in IMG/M
3300031231\|Ga0170824_100730719	Not Available	519	Open in IMG/M
3300031543\|Ga0318516_10184524	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031546\|Ga0318538_10590158	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300031549\|Ga0318571_10003886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3026	Open in IMG/M
3300031549\|Ga0318571_10006133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2603	Open in IMG/M
3300031564\|Ga0318573_10001903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7567	Open in IMG/M
3300031572\|Ga0318515_10004340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5790	Open in IMG/M
3300031640\|Ga0318555_10097938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1542	Open in IMG/M
3300031680\|Ga0318574_10012118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3961	Open in IMG/M
3300031681\|Ga0318572_10471546	Not Available	747	Open in IMG/M
3300031682\|Ga0318560_10583763	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300031723\|Ga0318493_10723791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	558	Open in IMG/M
3300031736\|Ga0318501_10179264	Not Available	1101	Open in IMG/M
3300031744\|Ga0306918_10459089	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300031764\|Ga0318535_10004866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4375	Open in IMG/M
3300031764\|Ga0318535_10514727	Not Available	531	Open in IMG/M
3300031765\|Ga0318554_10247889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M
3300031771\|Ga0318546_10192798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1389	Open in IMG/M
3300031778\|Ga0318498_10248840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300031779\|Ga0318566_10359599	Not Available	718	Open in IMG/M
3300031781\|Ga0318547_10004358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5856	Open in IMG/M
3300031793\|Ga0318548_10126620	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300031798\|Ga0318523_10110707	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300031831\|Ga0318564_10468505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	548	Open in IMG/M
3300031832\|Ga0318499_10003127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4653	Open in IMG/M
3300031832\|Ga0318499_10146123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300031833\|Ga0310917_10882669	Not Available	602	Open in IMG/M
3300031835\|Ga0318517_10312844	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300031835\|Ga0318517_10408657	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031845\|Ga0318511_10284721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300031846\|Ga0318512_10730473	Not Available	508	Open in IMG/M
3300031859\|Ga0318527_10007127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3509	Open in IMG/M
3300031890\|Ga0306925_11532948	Not Available	651	Open in IMG/M
3300031894\|Ga0318522_10192230	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300031897\|Ga0318520_11101118	Not Available	503	Open in IMG/M
3300031910\|Ga0306923_10143765	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300031910\|Ga0306923_12062185	Not Available	577	Open in IMG/M
3300031939\|Ga0308174_11716970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300031945\|Ga0310913_10325574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300031946\|Ga0310910_10206722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1524	Open in IMG/M
3300031947\|Ga0310909_11304152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	584	Open in IMG/M
3300032001\|Ga0306922_10352328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1579	Open in IMG/M
3300032008\|Ga0318562_10099030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1653	Open in IMG/M
3300032010\|Ga0318569_10290786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300032025\|Ga0318507_10204953	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300032042\|Ga0318545_10022677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2010	Open in IMG/M
3300032043\|Ga0318556_10026549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2650	Open in IMG/M
3300032054\|Ga0318570_10243134	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300032054\|Ga0318570_10243772	Not Available	815	Open in IMG/M
3300032055\|Ga0318575_10043370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2033	Open in IMG/M
3300032055\|Ga0318575_10048847	Not Available	1933	Open in IMG/M
3300032059\|Ga0318533_10794657	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300032064\|Ga0318510_10281662	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300032068\|Ga0318553_10275577	Not Available	879	Open in IMG/M
3300032091\|Ga0318577_10537082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	557	Open in IMG/M
3300032094\|Ga0318540_10433808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	635	Open in IMG/M
3300032261\|Ga0306920_101552009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	944	Open in IMG/M
3300032515\|Ga0348332_12218717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300032782\|Ga0335082_10630938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	933	Open in IMG/M
3300032892\|Ga0335081_11187814	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300032895\|Ga0335074_10347731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. DSM 110486	1652	Open in IMG/M
3300032896\|Ga0335075_11593095	Not Available	537	Open in IMG/M
3300032897\|Ga0335071_10210072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1900	Open in IMG/M
3300032897\|Ga0335071_10576037	Not Available	1077	Open in IMG/M
3300032954\|Ga0335083_11457940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	521	Open in IMG/M
3300032955\|Ga0335076_11624831	Not Available	534	Open in IMG/M
3300033158\|Ga0335077_10433516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	1405	Open in IMG/M
3300033158\|Ga0335077_11386600	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300033158\|Ga0335077_12026495	Not Available	534	Open in IMG/M
3300033289\|Ga0310914_10292078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1469	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.26%
Host-Associated	Host-Associated	10.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.78%
Plants	Host-Associated → Plants	10.74%
Aquatic	Environmental → Aquatic	2.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.13%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Sediment	Environmental → Aquatic → Sediment	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.79%
Loam	Environmental → Terrestrial → Soil → Loam	4.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_00789290	2170459024	Grass Soil	MAHDGVIAKEEAMPSHDPIPRNGVSHGGREGTSALPGPLRHFADQLEEVRSAKILDMDQVGRVLVELTADEEFFSPLIAQLPSGSPGSRWLIRPGRGPRLVLVHRPEGVMGYTH
Ga0070669_1016092531	3300005353	Switchgrass Rhizosphere	MDQEARFQQSPRNGGQRGTSGLPGPLRRFADRLDEVRSADIVPMDQVGQVLVELAADEGFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVH
Ga0070714_1013014762	3300005435	Agricultural Soil	MDQEARFQETPRNGEQQGTSGLPGPLRRFADRLDEVRSADIVHMDQVGQALVELAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEAVMGYT
Ga0070713_1023857772	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDQEARFQETPRNGEQQGTSGLPGPLRRFADRLDEVRSADIVHMDQVGQALVELAADEEFFGPLIAQLPSGSPGSRWLIRP
Ga0070707_1021341811	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEQEASFQETPRNGGQRGTSGLPGPLRRFADRLDEVRSAEIVHMDQVGQVLADLAADEEFFGPLIAQLPSGSPGSRWLIRPE
Ga0068859_1025851391	3300005617	Switchgrass Rhizosphere	MDQEARFQQSPRNGEQRGTSGLPGPLRRFADRLDEVRSADIVPMDQVGQVLVELAADEGFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPE
Ga0068861_1002626024	3300005719	Switchgrass Rhizosphere	MDQEARFQQSPRNGGQRGTSGLPGPLRRFADRLDEVRSADIVPMDQVGQVLVELAADEGFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEAVMG
Ga0066903_1014285601	3300005764	Tropical Forest Soil	MTSQDPVPRNEAGYGGQTGTGALPGQLRHFADRLDDLRSADVLDMDQVGRLLVDLAADEEFFGPLIAQLPSGSPGNQWLIRPERGPRL
Ga0068858_1024404992	3300005842	Switchgrass Rhizosphere	LPGPLRRFADRLDEVRSAEIVHMDQVGQVLADLAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHR
Ga0075019_107931341	3300006086	Watersheds	MTYDPLRHFADRLDEARSADVVDMDQVGRLLVELAADEEFFGPLIAQFPSGSPSNRWLIRPERGPRLVL
Ga0070715_100124493	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDQEARFQQSPRNGGQRGTSGLPGPLRRFADRLDEVRSADIVPMDQVGQVLVELAADEGFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEG
Ga0070712_1008983601	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPSHDPVPRDAAGYGGQTGTSALPGPLRHFADRLDELRSAEVVDMDQVGRLLVQLAADEEFFGPLIAQLPSGSPGSQWLIRPERGPRLVLVHRPEGVMGYTHSHRCWVGITPV
Ga0074055_115680111	3300006573	Soil	MPSHDPIPRNGVSHGGQEGTSALPGPLRHFADRLEEVRSAKILDMDQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEAVMGYTHSHRCWVGIAP
Ga0079222_112160612	3300006755	Agricultural Soil	MQTGNGGWPRRLRRFSDRLDEVRSAQVVDMDQVGRVLVKLAADEEFFAPLITQLPSGSPGSRWLIKPARGPRLVLVHRP
Ga0075424_1018110162	3300006904	Populus Rhizosphere	MAPDDQVPRNVPRNRAGDGGQPGAGGLPQPLRHFADRLGEVRSAEILDMKQVGRVLVELAADAEFFGPLIAQLPSGSPGSRWLIRPERGP
Ga0079219_107498132	3300006954	Agricultural Soil	LPGPLRRFADRLDEVRSAEIVHMDLVGQVLADLAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEGVMGYT
Ga0105247_106403571	3300009101	Switchgrass Rhizosphere	MEQEASFQETPRPGGPRGTSGLPGPLRRFADRLDEVRSAEIVHMDQVGQVLADLAADEEFFGPLIAQLPSGSPGSRSLTRPERGPRLVLVHRPEGVMGYTHSHR
Ga0105243_123270732	3300009148	Miscanthus Rhizosphere	MAAGNGGQKGTSGLPGPLRRFADRLDEVRSADVVDMGQVGRLLVELAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLV
Ga0105248_122306211	3300009177	Switchgrass Rhizosphere	MAAGNGGQKGTSGLPGPLRRFADRLDEVRSADVVDMDQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLV
Ga0126374_109678902	3300009792	Tropical Forest Soil	MTSHDPVPRNEAACGGQPGTGALPGPLRHFTDRLDDLRSADVLDMDRVGRLLVELAADEEFFGPLIAQIPSSSPGNRWLIKPERGPRLVLV
Ga0126378_121916731	3300010361	Tropical Forest Soil	MTSHDPVPRNEAGFGGQSGSGALPGPLRHFADRLDDLRSADVLDMDRVGRLLVELAADEEFFGPLIAQIPSASPGNRW
Ga0126377_121116432	3300010362	Tropical Forest Soil	MQTGNGGLPGPLRHFADRLDEVRSADVPDMDQVGRVLVELAADEEFFGPLIAQLPADSPGSRWLIRPER
Ga0126377_122771071	3300010362	Tropical Forest Soil	MTSHDPVPRNEAGYAGQTGTGALPGPLRHFANRLDDLRSADVLDMDQVGQLLVELAADEGFFTALIAQLPSGSPGNRWLIRPERGPRLVLVHRPEGVMGYTH
Ga0134125_116346772	3300010371	Terrestrial Soil	MEQEASFQETPRPGGPRGTSGLPGPLRRFADRLDEVRSAEIVHMDQVGQVLADLAADEEFFAPLIAQLPSGSPGSRWLTRPERGPRLVLVHRPEG*
Ga0126381_1018785181	3300010376	Tropical Forest Soil	MPSDDPIPRNRAGYGGQLGTGALSEPLRHFVDQLDELRSADLLDMDLVGRLLVELAADEEFFGPLIAEIPSDAPGDRWLIRPERGPRLV
Ga0157335_10417211	3300012492	Arabidopsis Rhizosphere	MEQEASFQETPRNGGQRGTSGLPGPLRRFADRLDVVRSAEIVHMDQVGQVLADLAADEEFFGPLIAQLPSGSPGSRWL
Ga0164304_104267141	3300012986	Soil	MEQEARFQETPRTSGLPGPLRRFADRLDEVRSAEIVHMDQVGQVLAELAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEAVMGYTHSH
Ga0157369_106592002	3300013105	Corn Rhizosphere	MEQEASFQETPRPGGPRGTSGLPGPLRRFADRLDEVRSAEIVHMDLVGQVLADLAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEG*
Ga0157369_116549831	3300013105	Corn Rhizosphere	MDQEERFQETPRNGGQRGTSGLPGPLRRFTDRLDEVRSAEIVHMDQVGQVLADLAADEEFFGPLIAQLPSGSPGSRWLI
Ga0182036_105927251	3300016270	Soil	MPSHDSVKQNGAGHGGQARTGALPGPLRHFATLLDELRSRDILDMQQVGRLLVELAADEEFFAPLIDQIPAAAPGDRWLIRPDRGPRL
Ga0182036_108977102	3300016270	Soil	MTSHDPAPRNEAGYGGQTGTGALPGPLRHFADRLDDLHSADVLDMDQVGQLLVELAADEGFFTPLIAQLPSGSPGNRWLIRPE
Ga0182041_103276783	3300016294	Soil	MPSDDSVLRNGGSHSGQPSSGGLPGPLRRFADRLAEVRSAEAVDMNQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPER
Ga0182033_107979982	3300016319	Soil	MPSDDSVLRNGGSHSGQPSSGGLPGPLRRFADRLAEVRSAEAVDMDQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPGRGPRLVLVHRPD
Ga0182035_108376891	3300016341	Soil	MMRRASSARTLTSMTSHDPVPRNEAGYGGQAGTGGLPGPLRHFADRLDEVRSVDVLDMDQVGRLLVELAADQEFFGPLIAQLPAGSPGNRWLIRPKRGPRLVLVHRPEGVMGYTH
Ga0182040_110593402	3300016387	Soil	MSSDDSVLRNGGSHGGQPSSGLPGPLRRFADRLDEVRSAQVFDMDQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPGRGPRLVLVHRPD
Ga0182037_119319782	3300016404	Soil	GQTDTGAWPGPLRRFADRIDEVRSADVPDMDQVGRALVELAADEEFFGPLIAQLPAGTPGSRWLIRPEPAPTR
Ga0182037_119702351	3300016404	Soil	MTSHDPAPRNEAGYGGQTGTGALPGPLRHFADRLDDLHSADVLNMDQVGRLLVELAADEEFFGPLIAQLPSGSPGNRWLIRPER
Ga0182039_107462452	3300016422	Soil	MMRRASSARTLTSMTSHDPVPRNEAGYGGQAGTGGLPGPLRHFADRLDEVRSVDVIDMDRVGRLLVELAADQEFFGPLIAQLPSGSPGNR
Ga0182039_118340761	3300016422	Soil	MGQTDTGAWPGPLRRFADRIDEVRSADVPDMDQVGRALVELAADEEFFGPLIAQLPAGTRGSR
Ga0187820_12655882	3300017924	Freshwater Sediment	MPSDDPVSYGGQTGSGGLPGPLRRFADRLAKARSAEVFDVDQAGRVLVELAADAEFFGPLIAQLPAGSPGSRWLIRPERGPRLVLVHRPE
Ga0187820_13306702	3300017924	Freshwater Sediment	MSDRAQTGTSALPGPLQQFADRLNELRSADVVDMDQVGRLLVELAADEAFFDPLIAQIPSGSPGSRWLVRPE
Ga0187781_109760251	3300017972	Tropical Peatland	MDPRYQETRQPAGGRTDTSGWPGPLRQFAGRLDELRSADVVDMRQVGRVLVDLAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLV
Ga0187765_112135351	3300018060	Tropical Peatland	MAAGDGGQTGTGGWPGPLRRFAERLAEVCSAEVFDLDQVGRVLVELAADEEFFGPLIAQLPVASPGSRWLIRPERGPRLVLVHRPDGVM
Ga0210405_109664962	3300021171	Soil	MPSHDPVPRRGAGLSGQEGIGGLPGPLRHFVDRLDELRSAEVVDMDQVGRVLVELAADEEFFGPLIAQLPSGSPGSRW
Ga0210393_107276342	3300021401	Soil	MPSDDPVSYGGQTGSGGLPGPLRRFADRLAKARSAEVFDVDQAGRVLVELAADAEFFDPLIAQLPAGSPGSG
Ga0210397_110793172	3300021403	Soil	MPSHDPVPRRGAGLSGQEGIGGLPGPLRHFVDRLDELRSAEVVDMDQVGRLLVELAADEEFFGPMIAQLPSASPGSRW
Ga0210390_104805653	3300021474	Soil	MSSHDPVPRSGAGHSGQEGIGGLPGPLRRFVDRLDELRSAEVVDMDQVGRILVELAADEEFFGPLIAQLPSGSPGNRWLIRPERGPRLVLVHRPEGVMGYTHSHRCWV
Ga0207654_112997811	3300025911	Corn Rhizosphere	LPGPLRRFADRLDEVRSAEIVHMDLVGQVLADLAADEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVL
Ga0268265_107306153	3300028380	Switchgrass Rhizosphere	MDQEARFQQSPRNGGQRGTSGLPGPLRRFADRLDEVRSADIVPMDQVGQVLVELAADEGFFGPLIAQLPSGSPGSRWLIRPERGPRL
Ga0222749_107051571	3300029636	Soil	MPPHDKALYSEASHGGQPGTGGLPGPLRRFADRLDEARSAEVIDMDQVGRVLVELAADEEFFGPLIAQIPPGTPGSRWLVRPERGP
Ga0170834_1074535152	3300031057	Forest Soil	MPSHDPVPRRGAGLSGQEGIGGLPGPLRHFVDRLDELRSAEVVDMDQVGRLLVELAADEEFFGPLIAQLPSGSPGSRGLVRPERGPRLVLVHRP
Ga0170824_1007307192	3300031231	Forest Soil	MPSHDPVPRRGAGLSGQEGIGGLPGPLRHFVDRLDELRSAEVVDMDQVGRLLVELAADEEFFGPLIAQRPSGSPGSRGLVRPERGPRLVLVHRP
Ga0318516_101845242	3300031543	Soil	MGQTDTGAWPGPLRRFADRIDEVRSADVPDMDQVGRALVELAADEEFFGPLIAQLPAGTPGSRWLIRPEPAPTR
Ga0318538_105901581	3300031546	Soil	MTSHDPVPRNEAGYGGQTGTGGLPGPLRHFADRLDEVRSVDVLDMDQVGRLLVELAADQEFFGALIAQLPSGSPGNRWLIRPERGPRLVLVHRPEGVMGYTHSHH
Ga0318571_100038861	3300031549	Soil	LSDGGQTDTGAWPEPLRRFADGLAEVRSADVVDMDQVGRLLVELAADQEFFGPLIAQIPPGSPGSRWLIKPRRGPR
Ga0318571_100061331	3300031549	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSG
Ga0318573_100019031	3300031564	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNRWLIRPERGPRLVLVHRPEGVMGYT
Ga0318515_100043408	3300031572	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNRWLIRPERGPRLVLVHRPE
Ga0318555_100979381	3300031640	Soil	MGQTDTGAWPGPLRRFADRIDEVRSADVPDMDQVGRALVELAADEEFFGPLIAQLPAGTPGSRW
Ga0318574_100121181	3300031680	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFSPLIAQLPSGSPGNRWLIRPE
Ga0318572_104715462	3300031681	Soil	MPSDDSVLRNGGSHSGQPSSGGLPGPLRRFADRLAEAGSADAVDMNQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPGRGPRLVLVHRPDGG
Ga0318560_105837631	3300031682	Soil	MTSHDPAPRNEAGYGGQTGTGALPGPLRHFADRLDDLHSADVLNMDQVGRLLVELAADEEFFGPLIAQLPSGSPGNRW
Ga0318493_107237912	3300031723	Soil	MPSDDSVLRNGGSHSGQPSSGGLPGPLRRFADRLAEAGSADAVDMNQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPGRGPRLVLVHRPDGVMGYT
Ga0318501_101792642	3300031736	Soil	LSDGAQTDTGAWPEPLRRFADRLAEVRSADVVDMDQVGRLLVELAADQEFFGPLIAQIPPGSPGSRWLIK
Ga0306918_104590892	3300031744	Soil	MMRRASSARTLTSMTSHDPVPRNEAGYGGQAGTGGLPGPLRHFSDRLDEVRSVDVIDMDRVGRLLVELAADQEFFGPLIAQLPSGSPGNRWLIRPERGPRLVLV
Ga0318535_100048667	3300031764	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNRWLIRPERGPRL
Ga0318535_105147271	3300031764	Soil	MPPYDPAPRNEAGHGGQPGTGGLPGPLRHFADRLDEVRSAEIFDMDQVGRVLVELAADAEFFGPLIAQLPAGSPGSRWLIRPARGPR
Ga0318554_102478891	3300031765	Soil	MKTGTSGWPGPLRRFADRLDEVRSADVLDMDQVGRVLVELAGDEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVH
Ga0318546_101927981	3300031771	Soil	MGQTDTGAWPGPLRRFADRIDEVRSADVPDMDQVGRALVELAADEEFFGPLIAQLPAGTPGSRWLIRPE
Ga0318498_102488402	3300031778	Soil	MPSDDSVLRDGASNGGPTGSGGLPAPLRRFADRLDELRSAEVADMDQVGRILVELAGDEEFFGPLIAQLPSGSPGSRWLIRPERGPR
Ga0318566_103595992	3300031779	Soil	MASDDPEPLRRFADRLDDIRSAEVFDINQVGRALVELAADEEFFGPLIAQLPSGSPGNRWLIKPERGPRLVLVHRPEGVMGYTHSHRC
Ga0318547_100043589	3300031781	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNRWLIRPERGPRLVLVHRPEGVMG
Ga0318548_101266201	3300031793	Soil	MPSDDSVLRDGASNGGPTGSGGLPAPLRHFADRLDELRSAEVVDMDQVGRILIELAGNEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRP
Ga0318523_101107071	3300031798	Soil	MTSHDPVPRNEAGYGGQAGTGGLPGPLRHFSDRLDEVRSVDLIDMDRVGRLLVELAADQEFFGPLIAKLPSGSPGNRWLIRPE
Ga0318564_104685052	3300031831	Soil	MPSEDSVLRDGASNGGQTGSGGLPAPLRHFADRLDELRSAEVVDMDQVGRILVELAGDEEFFGPLIAQLPSG
Ga0318499_100031277	3300031832	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNRWLIRPERGPRLVLVHRPEG
Ga0318499_101461231	3300031832	Soil	MPSDDSVLRDGASNGGPTGSGGLPAPLRRFADRLDELRSAEVADMDQVGRILVELAGDEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEGVMGYTHS
Ga0310917_108826692	3300031833	Soil	LSDGGQTDTGAWPEPLRRFADRLDEVRSADVVDMDQVGRLLVELAADEEFFGPLIAQIPPGSPGSRWLIKPRRGPRLVLVHRPDGVMG
Ga0318517_103128442	3300031835	Soil	MTSHDPVPRNEAGYGGQTGTGGEPGRLRHFADRLDEVRSAKILDMDQVGQVLVELAADEEFFGPLIAQLPSGSPGNRWLIRPERGPRLVLVHRPEGVMGYTHSHRC
Ga0318517_104086571	3300031835	Soil	LSDGGQTDTGAWPEPLRRFADRLDEVRSADVVDMDQVGRLLVELAADQEFFGPLIAQIPPGSPGSRWLIKP
Ga0318511_102847211	3300031845	Soil	MPSDDSVLRDGASNGGPTGSGGLPAPLRRFADRLDELRSAEVVDMDQVGRILVELARDEEFFGPLIAQLPSGSPGSRWLIRLERGPRLVLVHRPEGVMGY
Ga0318512_107304731	3300031846	Soil	LSDGGQTDTGAWPEPLRRFADRLDEVRSADVVDMDQVGRLLVELAADEEFFGPLIAQIPPGSPGSRW
Ga0318527_100071276	3300031859	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNRWLIRPERGPRLVLVHRPEGVMGYTHSHRCW
Ga0306925_115329481	3300031890	Soil	MASDDPEPLRRFADRLDDIRSAEVFDINQVGRALVELAADEEFFGPLIAQLPSGSPGNRWLIKPERGPRLVLVHRPEGVMGY
Ga0318522_101922302	3300031894	Soil	MPSDDSVLRDGASNGGPTGSGGLPAPLRRFADRLDELRSAEVVDMDQVGRILVELARDEEFFGPLIAQLPSGSPGSRWLIRLERGPRL
Ga0318520_111011182	3300031897	Soil	MAVGNGGQTDSSGLAGPLRHFTDRLDEVRSADVVDMDQVGRVLVDLAADEEFFGPLIAQLPPGSPGSRWLIKPERGPRLVLVHRPEG
Ga0306923_101437655	3300031910	Soil	SAMGQTDTGAWPGPLRRFADRIDEVRSADVPDMDQVGRALVELAADEEFFGPLIAQLPAGTPGSRWLIRPEPAPTR
Ga0306923_120621852	3300031910	Soil	MTSHDPVPRNEAGFGGQSDSGALPGPLRYFSDRLDDLRSADVLDMNQVGRLLVELAADEELFDPLIAQLPTGSAGNRWLIRPARRCGDPGPAPERA
Ga0308174_117169702	3300031939	Soil	VTQPLRHFADRLDEIRSAEILDMNQVGRALVELAADAEFFGPLIARLPSGSPGSQWLIRPERGPRLVLVHRPDGVMGY
Ga0310913_103255743	3300031945	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNR
Ga0310910_102067221	3300031946	Soil	MGQTDTGAWPGPLRRFADRIDEVRSADVPDMDQVGRALVELAADEEFFGPLIAQLPAGTPGSRWLIRPEPA
Ga0310909_113041522	3300031947	Soil	MPSEDSVLRDGASNGGQTGSGGLPAPLRHFVDRLDELRSAEVVDMDQVGRILVELAGDEEFFGPLIAQLPSGSPGSRWLIRPERG
Ga0306922_103523284	3300032001	Soil	MPSHDSVKQNGAGHGGQARTGALPGPLRHFATLLDELRSRDILDMQQVGRLLVELAADEEFFAPLIDQIPAAAPGDRWLIRPDRGPRLVLVHR
Ga0318562_100990303	3300032008	Soil	MPSEDSVLRDGASNGGQTGSGGLPAPLRHFVDRLDELRSAEVVDMDQVGRILVELAGDEEFFGPLIAQLPSG
Ga0318569_102907862	3300032010	Soil	MPSDDSVLRDGASNGGPTGSGGLPAPLRRFADRLDELRSAEVADMDQVGRILVELAGDEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEGVM
Ga0318507_102049532	3300032025	Soil	LSDGAQTDTGAWPEPLRRFADRLAEVRSADVVDMDQVGRLLVELAADQEFFGPLIAQIPPGSPGSRWLIKPRRGPRLVLVHRPD
Ga0318545_100226771	3300032042	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNRWLIRPERGPRLVLVHRPEGVMGYTHSHR
Ga0318556_100265491	3300032043	Soil	MPSDDPVPRSEVSAGEQPGTGALPGPLRRFADRLDEVRSAEVLDMDQVGQVLVELAADEEFFEPLIAQLPSGSPGNRWLIRPERGPR
Ga0318570_102431341	3300032054	Soil	MPSDDSVLRDGASNGGPTGSGGLPAPLRRFADRLDELRSAEVADMDQVGRILVELAGDEEFFGPLIAQLPSGSPGSRWLIRPERGPRL
Ga0318570_102437721	3300032054	Soil	MPPYDPAPRNEAGHGGQPGTGGLPGPLRHFADRLDEVRSAEIFDMDQVGRVLVELAADAEFFGPLIAQLPAGSPGSRWLIRPARG
Ga0318575_100433701	3300032055	Soil	MPSEDSVLRDGASNGGQTGSGGLPAPLRHFVDRLDELRSAEVVDMDQVGRILVELAGDEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEGVMGYTHSHHCWVGI
Ga0318575_100488471	3300032055	Soil	LSDGAQTDTGAWPEPLRRFADRLAEVRSADVVDMDQVGRLLVELAADQEFFGPLIAQIPPGSPGSRWLIKPRRGPRLVLVHRPDG
Ga0318533_107946571	3300032059	Soil	MMRRASSARTLTSMTSHDPVPRNEAGYGGQAGTGGLPGPLRHFSDRLDEVRSVDVIDMDRVGRLLVELAADQEFFGPLIAQLPAGSPGNRWLIRPKRGPRLVLVHRPEGVMGYTHSHHCWVGI
Ga0318510_102816622	3300032064	Soil	MTSHDPAPRNEAGYGGQTGTGALPGPLRHFADRLDDLHSADVLNMDQVGRLLVELAADEEFFGPLIAQLPSGSPGNRWLIRPERGPRLVLV
Ga0318553_102755771	3300032068	Soil	MGQTDTGAWPGPLRRFADRIDEVRSADVPDMDQVGRALVELAADEEFFGPLIAQLPAGTPGSRWLIRPEPAPT
Ga0318577_105370821	3300032091	Soil	MPSDDSVLRDGASNGGQTGRGGLPAPLRHFADRLDELRSAEVADMDQVGRILVELAGDEEFFGPLIAQLP
Ga0318540_104338082	3300032094	Soil	MPSDDSVLRNGGSHSGQPSSGGLPGPLRRFADRLAEAGSADAVDMNQVGRVLVELAADEEFFGPLIAQLPSGSPGSRWLIRPGRGPRLVLVHRPDGVMGYTHSHHC
Ga0306920_1015520092	3300032261	Soil	MPSDDSVLRDGASNGGPTGSGGLPAPLRRFADRLDELRSAEVVDMDQVGRILVELARDEEFFGPLIAQLPSGSPGSRWL
Ga0348332_122187171	3300032515	Plant Litter	MTDTGPTGDPVPHSGAGLSRQEGIGGLPGPLRHFSDRLDELRSAEVVDMGQVGRLLVELAADKEFFGPLIALLLPARPATGG
Ga0335082_106309381	3300032782	Soil	MPPHDPARRNEPRHGGQPGTGGLPGPLHHFAGRLHELCSADVVDLDQAGRALVELAADEEFFGPLIAQLPAG
Ga0335081_111878142	3300032892	Soil	MPSHDPDPRNGMSDGGHAGTTPSPGPLRHFADRLDEVRSAEIPDLDQVGRILVELAADREFFGPLIAQLPAGSPGNRWRGSSTC
Ga0335074_103477311	3300032895	Soil	MGPGYQEKRQAGTSAWPGPLRHFADRLDELRSADVVDMHQVGRALVDLAADAEFFGPLIAQLPAGSPGSRWLIRP
Ga0335075_115930952	3300032896	Soil	MGPGYQEKRQAGTSAWPGPLRHFADRLDELRSADVVDMHQVGRALVDLAADTEFFGPLIAQLPSGSPGSR
Ga0335071_102100723	3300032897	Soil	MRDGASNGGQTGSGGLPAPLRHFTDRLDELRSAEVVDMDQVGRTLVELAGDEEFFGPLIAQLPSGSPGSRWLIRPERGPRLVLVHRPEGVM
Ga0335071_105760372	3300032897	Soil	VSDSGQPGTGAWPAPLRRFADQVEEISSAEIFDLDRVGRVLVELAADEEFFGPLIAQLPAGSPGSRWLIKPERGPRLVLVHRP
Ga0335083_114579401	3300032954	Soil	MPPHDPARRNEPRHGGQPGTGGLPGPLHHFAGRLHELCSADVVDLDQAGRALVELAADEEFFGPLIAQ
Ga0335076_116248311	3300032955	Soil	MPSDDPVSYGGQTGSGGLPGPLRHFADRLAEVRSAEVFDVDRAGRVLVELAADTEFFDPLIAQLPAGSPGSQWLIRPERGP
Ga0335077_104335162	3300033158	Soil	MPSHAPDPRNGMSDGGPAGTTPRPGPLRHFADRLDEVRSAPILDMDQVGRILTELAADQEFFGPLIAQLPAGSAGNRWLIRPERGPRLVLVHRPEGVMGYTH
Ga0335077_113866001	3300033158	Soil	MPSHDPDPRNGMSDGGHAGTTPSPGPLRHFADRLDEVRSAEIPDLDQMGRILVELAADREFFGPLIAQLPAGSPGNRWLIRPERGPRLVLVHRPEGVMGYTH
Ga0335077_120264952	3300033158	Soil	MPPHDPALRNDAGHGGQPGTGGLPGPLCHFLDRLDAVRSADVVDMDQVGRLLVNLAGDEEFFGPLIAQLPSGSPGSRWLIRPGRGPRLVL
Ga0310914_102920781	3300033289	Soil	MPSHDSVKQNGAGHGGQARTGALPGPLRHFATLLDELRSRDILDMQQVGRLLVELAADEEFFAPLIDQIPAAAPGDRWLIRPDRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072804

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences