Metagenome / Metatranscriptome Family F072944

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Overview

Basic Information
Family ID	F072944
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	57 residues
Representative Sequence	MNKFSKLLNKIKSTESYTRDMVLKFLPEPSHELNILQKNYQALYTPDKLVMHLT
Number of Associated Samples	80
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.17 %
% of genes near scaffold ends (potentially truncated)	61.67 %
% of genes from short scaffolds (< 2000 bps)	97.50 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (67.500 % of family members)
Environment Ontology (ENVO)	Unclassified (92.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (90.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.32% β-sheet: 0.00% Coil/Unstructured: 42.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
All Organisms	root	All Organisms	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
cellular organisms	root	All Organisms → cellular organisms	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005615\|Ga0070702_101025973	Not Available	655	Open in IMG/M
3300005617\|Ga0068859_103101821	Not Available	507	Open in IMG/M
3300005841\|Ga0068863_102429259	Not Available	533	Open in IMG/M
3300009972\|Ga0105137_110120	Not Available	517	Open in IMG/M
3300009972\|Ga0105137_110987	Not Available	501	Open in IMG/M
3300009973\|Ga0105136_110031	Not Available	576	Open in IMG/M
3300009975\|Ga0105129_109358	Not Available	645	Open in IMG/M
3300009977\|Ga0105141_126448	Not Available	514	Open in IMG/M
3300009980\|Ga0105135_107143	Not Available	788	Open in IMG/M
3300009981\|Ga0105133_128267	Not Available	525	Open in IMG/M
3300009992\|Ga0105120_1040003	Not Available	577	Open in IMG/M
3300009995\|Ga0105139_1099243	Not Available	559	Open in IMG/M
3300010371\|Ga0134125_12689870	Not Available	541	Open in IMG/M
3300010371\|Ga0134125_12708981	Not Available	539	Open in IMG/M
3300010397\|Ga0134124_11642732	Not Available	674	Open in IMG/M
3300010403\|Ga0134123_13518373	Not Available	507	Open in IMG/M
3300014968\|Ga0157379_12007275	Not Available	572	Open in IMG/M
3300014968\|Ga0157379_12502538	Not Available	516	Open in IMG/M
3300015270\|Ga0182183_1078519	Not Available	536	Open in IMG/M
3300015278\|Ga0182099_1055224	Not Available	548	Open in IMG/M
3300015280\|Ga0182100_1089110	Not Available	524	Open in IMG/M
3300015284\|Ga0182101_1028219	Not Available	762	Open in IMG/M
3300015290\|Ga0182105_1056932	Not Available	631	Open in IMG/M
3300015290\|Ga0182105_1059301	Not Available	623	Open in IMG/M
3300015290\|Ga0182105_1064882	Not Available	604	Open in IMG/M
3300015293\|Ga0182103_1021285	Not Available	820	Open in IMG/M
3300015293\|Ga0182103_1068349	Not Available	580	Open in IMG/M
3300015293\|Ga0182103_1076287	Not Available	559	Open in IMG/M
3300015297\|Ga0182104_1036181	Not Available	760	Open in IMG/M
3300015297\|Ga0182104_1072350	Not Available	605	Open in IMG/M
3300015297\|Ga0182104_1101730	Not Available	536	Open in IMG/M
3300015301\|Ga0182184_1038811	Not Available	696	Open in IMG/M
3300015301\|Ga0182184_1048538	Not Available	646	Open in IMG/M
3300015309\|Ga0182098_1042727	Not Available	732	Open in IMG/M
3300015309\|Ga0182098_1057117	Not Available	667	Open in IMG/M
3300015309\|Ga0182098_1112744	Not Available	527	Open in IMG/M
3300015310\|Ga0182162_1055467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	686	Open in IMG/M
3300015310\|Ga0182162_1127622	Not Available	506	Open in IMG/M
3300015315\|Ga0182120_1076009	Not Available	636	Open in IMG/M
3300015317\|Ga0182136_1108588	Not Available	558	Open in IMG/M
3300015319\|Ga0182130_1020400	Not Available	953	Open in IMG/M
3300015319\|Ga0182130_1066887	Not Available	654	Open in IMG/M
3300015324\|Ga0182134_1046579	Not Available	774	Open in IMG/M
3300015324\|Ga0182134_1107218	Not Available	572	Open in IMG/M
3300015324\|Ga0182134_1116673	Not Available	553	Open in IMG/M
3300015325\|Ga0182148_1096293	Not Available	592	Open in IMG/M
3300015326\|Ga0182166_1071651	Not Available	656	Open in IMG/M
3300015328\|Ga0182153_1016709	Not Available	1076	Open in IMG/M
3300015329\|Ga0182135_1058459	Not Available	730	Open in IMG/M
3300015329\|Ga0182135_1085668	Not Available	635	Open in IMG/M
3300015329\|Ga0182135_1103340	Not Available	592	Open in IMG/M
3300015331\|Ga0182131_1038264	Not Available	850	Open in IMG/M
3300015331\|Ga0182131_1147391	Not Available	515	Open in IMG/M
3300015332\|Ga0182117_1114413	Not Available	597	Open in IMG/M
3300015332\|Ga0182117_1126133	Not Available	572	Open in IMG/M
3300015333\|Ga0182147_1103170	Not Available	618	Open in IMG/M
3300015334\|Ga0182132_1064597	Not Available	741	Open in IMG/M
3300015334\|Ga0182132_1119265	Not Available	584	Open in IMG/M
3300015334\|Ga0182132_1122102	Not Available	578	Open in IMG/M
3300015335\|Ga0182116_1053713	Not Available	823	Open in IMG/M
3300015335\|Ga0182116_1127343	Not Available	586	Open in IMG/M
3300015336\|Ga0182150_1102683	Not Available	612	Open in IMG/M
3300015337\|Ga0182151_1098867	Not Available	621	Open in IMG/M
3300015338\|Ga0182137_1127633	Not Available	583	Open in IMG/M
3300015339\|Ga0182149_1081889	Not Available	685	Open in IMG/M
3300015340\|Ga0182133_1078618	Not Available	731	Open in IMG/M
3300015340\|Ga0182133_1172902	Not Available	526	Open in IMG/M
3300015340\|Ga0182133_1174326	Not Available	525	Open in IMG/M
3300015349\|Ga0182185_1173597	Not Available	647	Open in IMG/M
3300015349\|Ga0182185_1277842	Not Available	511	Open in IMG/M
3300015349\|Ga0182185_1287495	Not Available	502	Open in IMG/M
3300015350\|Ga0182163_1273159	Not Available	529	Open in IMG/M
3300015350\|Ga0182163_1281406	Not Available	521	Open in IMG/M
3300015352\|Ga0182169_1190876	Not Available	670	Open in IMG/M
3300015353\|Ga0182179_1105288	Not Available	848	Open in IMG/M
3300015353\|Ga0182179_1222566	Not Available	605	Open in IMG/M
3300015354\|Ga0182167_1224350	Not Available	683	Open in IMG/M
3300015354\|Ga0182167_1294712	Not Available	577	Open in IMG/M
3300015354\|Ga0182167_1348513	Not Available	518	Open in IMG/M
3300017414\|Ga0182195_1103337	Not Available	682	Open in IMG/M
3300017414\|Ga0182195_1159345	Not Available	576	Open in IMG/M
3300017422\|Ga0182201_1114291	Not Available	546	Open in IMG/M
3300017432\|Ga0182196_1113724	Not Available	562	Open in IMG/M
3300017432\|Ga0182196_1127091	Not Available	541	Open in IMG/M
3300017435\|Ga0182194_1043206	Not Available	804	Open in IMG/M
3300017440\|Ga0182214_1081972	Not Available	673	Open in IMG/M
3300017445\|Ga0182198_1138097	Not Available	586	Open in IMG/M
3300017445\|Ga0182198_1140766	Not Available	582	Open in IMG/M
3300017446\|Ga0182217_1153380	Not Available	542	Open in IMG/M
3300017447\|Ga0182215_1122404	Not Available	589	Open in IMG/M
3300017447\|Ga0182215_1141686	Not Available	552	Open in IMG/M
3300017692\|Ga0182210_1104033	Not Available	613	Open in IMG/M
3300020023\|Ga0182178_1005465	Not Available	820	Open in IMG/M
3300028049\|Ga0268322_1033090	Not Available	606	Open in IMG/M
3300028051\|Ga0268344_1012457	Not Available	633	Open in IMG/M
3300028056\|Ga0268330_1021393	Not Available	732	Open in IMG/M
3300028056\|Ga0268330_1029147	Not Available	661	Open in IMG/M
3300028061\|Ga0268314_1049373	Not Available	521	Open in IMG/M
3300028140\|Ga0268334_1009931	Not Available	626	Open in IMG/M
3300028151\|Ga0268308_1024421	Not Available	560	Open in IMG/M
3300028153\|Ga0268320_1016943	Not Available	600	Open in IMG/M
3300028154\|Ga0268341_1013031	Not Available	663	Open in IMG/M
3300028154\|Ga0268341_1026734	Not Available	533	Open in IMG/M
3300028256\|Ga0268304_1005833	Not Available	683	Open in IMG/M
3300028467\|Ga0268333_1009107	Not Available	576	Open in IMG/M
3300028469\|Ga0268337_1013343	Not Available	568	Open in IMG/M
3300028470\|Ga0268307_1020146	Not Available	538	Open in IMG/M
3300028470\|Ga0268307_1021209	Not Available	530	Open in IMG/M
3300028472\|Ga0268315_1024481	Not Available	524	Open in IMG/M
3300028473\|Ga0268319_1015473	Not Available	580	Open in IMG/M
3300028474\|Ga0268331_1010750	Not Available	677	Open in IMG/M
3300028475\|Ga0268327_1026528	Not Available	509	Open in IMG/M
3300028476\|Ga0268329_1021231	Not Available	558	Open in IMG/M
3300028477\|Ga0268309_1005015	Not Available	761	Open in IMG/M
3300032689\|Ga0214497_1026324	Not Available	1227	Open in IMG/M
3300032758\|Ga0314746_1152397	Not Available	514	Open in IMG/M
3300032918\|Ga0314726_125939	Not Available	653	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	95.83%
Environmental	Environmental	4.17%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	95.83%
Terrestrial	Environmental → Terrestrial	4.17%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	85.00%
Unclassified	Host-Associated → Plants → Unclassified	7.50%
Soil	Environmental → Terrestrial → Soil	4.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	85.00%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	7.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.67%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	85.00%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	7.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	67.50%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	17.50%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	7.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300009972	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_224 metaG	Host-Associated	Open in IMG/M
3300009973	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_222 metaG	Host-Associated	Open in IMG/M
3300009975	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaG	Host-Associated	Open in IMG/M
3300009977	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_91 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015301	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017446	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017692	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028051	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028140	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028151	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028153	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028154	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028256	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028467	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028469	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028470	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028473	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028474	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028475	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028476	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028477	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032758	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032918	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_05JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070702_1010259731	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNKFSKPLSKIKSTESYTRDMVLKFLPEPSHELNISRKNYQPLYQPDKLVMNL
Ga0068859_1031018211	3300005617	Switchgrass Rhizosphere	ISKPLTKINSTESYTRNMVFKFLPEPSHEICILQKNYQALYSQDKLVMLLT*
Ga0068863_1024292592	3300005841	Switchgrass Rhizosphere	FIHLYSRGDKKNKFSKLLTKINFTESFTRDMVLTFLPEPTNEPNILQKIFQDLSQYDKLVMQLT*
Ga0105137_1101201	3300009972	Switchgrass Associated	ILYTYTAGVTKKHKNSKPLKKINFLESYTRNMVLKFLPEPNHELSILQKIFQDLSQHYKLVMQLT*
Ga0105137_1109871	3300009972	Switchgrass Associated	YSRGDKKNKNSKPLTKINSTESFTKDLVLKFLPETIHELRILQKNYQALYPPDNLVMRLIYHELA*
Ga0105136_1100311	3300009973	Switchgrass Associated	SYIRGDKMNKISKLLTKIKSIESYTRNMVLKFLPEPSHELKILHKNYQALYTPDKLVTHLT*
Ga0105129_1093581	3300009975	Switchgrass Associated	MNKFSKLLNKIKSTENYTRDIVLKVLPEPSHKLNIFPKNYQALYQPYKLVMHLT*
Ga0105141_1264481	3300009977	Switchgrass Associated	YSRGDKKNKNRKPLTKINSTKSYTRNMVLKFLPKPNHEINILQKNYQALYYYNKLVMQLT
Ga0105135_1071432	3300009980	Switchgrass Associated	MNKFSKLLNKINSTESYTRDMVLKFLPEPSNELKIFPKNYQALYQPDKLVMHLT*
Ga0105133_1282671	3300009981	Switchgrass Associated	MKNFSKLLTKIKSTESYTGDMVLNFLPELNHEIRILQKNYQALYPPDKLVMQLT*
Ga0105120_10400031	3300009992	Switchgrass Associated	MNKISKPLTKIKSTESYTRDMVLKFLPEPIHELNILQKNYQALCQHDKLVMQLT*
Ga0105139_10992431	3300009995	Switchgrass Associated	VTKRIKTADHLTKINSPESCTRDMILKFLPEPIHELNILQKNYHALYPPDILAMQLT*
Ga0134125_126898701	3300010371	Terrestrial Soil	NSKPLTKINSTESFTRDMVLKFLPEPNHELNILQKIFQYLTQHDKLVMQLY*
Ga0134125_127089811	3300010371	Terrestrial Soil	MNKFSKLLNKINSTESYTRDMVLKFIPEPSHEISILHKNYQALYPPDKLVMQLIQHELA*
Ga0134124_116427321	3300010397	Terrestrial Soil	MNKFSKLLNKIKSTESYTRDMVLKFLPEPSHELNIIHKNYQASYQQDKLVMHLTYHELA*
Ga0134123_135183731	3300010403	Terrestrial Soil	FIHLYSRGDKKNTFSKLLTKINSTESYTRDMVNKFLPEPIHELNILQKNYKALYHYDKLVMQLILT*
Ga0157379_120072751	3300014968	Switchgrass Rhizosphere	KDKISKLLTKIKTTESYTRDMVLNFLPELSNEIKILQKNYQALYHQFKLVMQLT*
Ga0157379_125025381	3300014968	Switchgrass Rhizosphere	MNKFSKLLNKIKSTESYTRDMVLKFLPEPSNEIDILRKNYQALYHQDKLIMHLTYHDLA*
Ga0182183_10785191	3300015270	Switchgrass Phyllosphere	MNKFSKLLTKINSTESYTRDMVLKFLPEPSHDLNIFPKNYQALYQPDKLVMHLT*
Ga0182099_10552241	3300015278	Switchgrass Phyllosphere	KINSTESYTRDMVLKFLPEPSHELNILPKNYQALYQQDKLVMHLIYHELA*
Ga0182100_10891101	3300015280	Switchgrass Phyllosphere	KFSNPLTKINSTESHTRNMVLKFLPEPSHEINVLQKNYQVLYTQDKLVMLLT*
Ga0182101_10282191	3300015284	Switchgrass Phyllosphere	VIFPDFIYLYITGDKMNKFSKILNKINSTVSYTRDMVLKFLPKPIHKLKIFHKNYQALYHQDKLVMQLTYHELA*
Ga0182105_10569321	3300015290	Switchgrass Phyllosphere	MNKFSKLLNKIKSTESYTGDMVLKFLPEPSHKLNIFPKNYQALYHYDKLVMQLT*
Ga0182105_10593011	3300015290	Switchgrass Phyllosphere	GDKKNKNSKPLTRINSTESFTWDMVLKFLPESTHELNILQKNYRALSPPDKLVMHLT*
Ga0182105_10648821	3300015290	Switchgrass Phyllosphere	LYSRGDKMNKFSKRLNKINSIESYTRDMVLKFLPEPSHELNMSHKNYQALYPQDINSYAFNLS*
Ga0182103_10212852	3300015293	Switchgrass Phyllosphere	PDFIHLYSKGDKKNKISKPLTKINSTESYTRNMVLKFLPEPSHEMSVLQKNHQALYTLDKLVMLLT*
Ga0182103_10683491	3300015293	Switchgrass Phyllosphere	LYSRGDKKNKNSKPLTKFKSTESCTRDMVLKFLPKPNHELNILQKNYQALYPLDKLVMQLI*
Ga0182103_10762871	3300015293	Switchgrass Phyllosphere	MNKFSKLLNKINSTEIYTRDMVLKFLPEPSNELNIFHKNYQASYLPDKLVMHLT*
Ga0182104_10361811	3300015297	Switchgrass Phyllosphere	MNKFSKLLNKINSRKSYTRDMVLKFLPKRSHELTILQKTYQALYLPDKLVMHLTLHELA*
Ga0182104_10723501	3300015297	Switchgrass Phyllosphere	MNKISKLLNKINFTESYTRDMVLKFLPEPSHELNMLQKNYQALYQPDKLVMHLT*
Ga0182104_11017301	3300015297	Switchgrass Phyllosphere	NEKISKLLTKIKSIESYTMDMVLKFLPEPSHELNILQKNYQALYPPDKLVMHLT*
Ga0182184_10388111	3300015301	Switchgrass Phyllosphere	MNKFSKPLTKINSIESYTRDIVLKFLPEPKHDLNLLQKNYQALYQTDKLVIRLT*
Ga0182184_10485382	3300015301	Switchgrass Phyllosphere	NKFSKLSNKINSTESYTRDMVLKFLPEPSHELIIFDKHYQALYQQYKLVMHLT*
Ga0182098_10427271	3300015309	Switchgrass Phyllosphere	KFSKPLIKINFIESYTRDMVLTFLPKPIHKLKIFQKNYQALYHQDKLVMQLN*
Ga0182098_10571171	3300015309	Switchgrass Phyllosphere	NKNNKPLKKINSTESYTRNMVLKFLPEPNNEINILQKNYQALYQPDKLVMHLT*
Ga0182098_11127441	3300015309	Switchgrass Phyllosphere	MNKFSKLLNKIKSTESYTRDMVLKFLPEPSHELNILQKNYQALYTPDKLVMHLT*
Ga0182162_10554671	3300015310	Switchgrass Phyllosphere	SKPLTKINSTESYTRNMVLKFLPEPNHEINILHEKYQALYHYYKLVMQLT*
Ga0182162_11276221	3300015310	Switchgrass Phyllosphere	MNKFSKLLNKINSIKSYTRDMVLKFLLQPSHQINIFHKNYEASYQQDKLVMHLHYHEIA*
Ga0182120_10760091	3300015315	Switchgrass Phyllosphere	KISKLLTKINSTESFTWDMVLKFLPEPIHELNILQKIFQDLTQHDKLIKQLY*
Ga0182136_11085881	3300015317	Switchgrass Phyllosphere	MNKFSKLLNKINSTESYTRVMVLKLLPEPSHELNIFYKNYQALYQPDKLVMHLN*
Ga0182130_10204002	3300015319	Switchgrass Phyllosphere	MNKFSKLLNKINSTESYTRDMALKFLPEPSHEIKIFQKNYQGFCQPDKLVMHLT*
Ga0182130_10668871	3300015319	Switchgrass Phyllosphere	MNKFSKPLTKINSTESYTRDMVLNFLPDPSHKLNIFLKNYQALYHQDKLVMQLTYHELA*
Ga0182134_10465791	3300015324	Switchgrass Phyllosphere	MNNFSKPLTKINSTESYTRYIALKFLPEPSHKLNIFHKNYQALYHQDKSVMQLTYHELA*
Ga0182134_11072182	3300015324	Switchgrass Phyllosphere	MNKFTKLLNKINSTESYTRDMVLKFLPEPNHELNLLQKNYQTLYHYDKLVMKLT*
Ga0182134_11166731	3300015324	Switchgrass Phyllosphere	NRGDKKNTISKPLTKINSPESCTMDMVLKFLPEPSKELSILQKNYQSLYPPDKLVIKLI*
Ga0182148_10889971	3300015325	Switchgrass Phyllosphere	LTKIDSPESCTMDMVLKFLPEPSKELNILQKNYQALYSPDKLVMLLT*
Ga0182148_10962931	3300015325	Switchgrass Phyllosphere	NKISKLLNKINSTKIYTRDMVLKFLPEPSHEPNILQKKNYQALHQPDKLVMHLT*
Ga0182166_10716511	3300015326	Switchgrass Phyllosphere	MNKFSKLLNKINSTESYTRDMVFKFLPEPSHKLNIFHKNYQALYRQDKLVMQLTYHELA*
Ga0182153_10167091	3300015328	Switchgrass Phyllosphere	MNKFSKPLTKINSTESYTRDTVLKFLPEPSNELNILQKNYQALYSPDKLVMLLT*
Ga0182135_10584591	3300015329	Switchgrass Phyllosphere	INSIESYTSDMVLIFLPEPSNEIDILCKNYQALYHQDKLIMHLTYHDLA*
Ga0182135_10856681	3300015329	Switchgrass Phyllosphere	MNKFSKPLTKINSTESYTRDMVLKFLPEPSNNLNIFHKNYQALYHQDKLVMQLTYHELA*
Ga0182135_11033401	3300015329	Switchgrass Phyllosphere	MNKFSKILNKINSTVSYTRDMVLKFLPESSHELNIFQKNYQALYPPDKLVMHLT*
Ga0182131_10382641	3300015331	Switchgrass Phyllosphere	INSTESYTRDMVLKFLPEPSHEPNILQKKNYQALHQPDKLVMHLT*
Ga0182131_11473911	3300015331	Switchgrass Phyllosphere	MNKLSKLLNKINSTESYIRNMVLKFLPEPSYELNILQKNYQALYHQDKLVMQLTYHELA*
Ga0182117_11144131	3300015332	Switchgrass Phyllosphere	NKNSKPLTKINSTESCTRDMALKFLPEPNHELNILQKNYQALYPLDKLVMQLI*
Ga0182117_11261331	3300015332	Switchgrass Phyllosphere	NISKPLTKINSTESYTRNMVLKFLPEPSHEICILQKNYQALYSQDKLVMLLT*
Ga0182147_11031701	3300015333	Switchgrass Phyllosphere	SKLLNKINSIKSYPRDMVLKFLLQPSHQINIFHKNYEASYQQDKLVMHLNYHELA*
Ga0182132_10645971	3300015334	Switchgrass Phyllosphere	NKIKSTESYTRDMVLKFLPEPSHELKIFPKNYQALYQPDKLVMHLT*
Ga0182132_11192651	3300015334	Switchgrass Phyllosphere	KKNKFSKLSTKIKSTESYTRDMVLKFLPEPNNKLNIFHKNYQALYHYDKLVMQLTYHELA
Ga0182132_11221021	3300015334	Switchgrass Phyllosphere	MNKFSKILNKINSTVSYTRDMVLKFLPESSHELNIFQKNYQALYHQDNLVMQLTYHELA*
Ga0182116_10537131	3300015335	Switchgrass Phyllosphere	EIFPDFIHLYSRGDKMNKFSKPLTKINSTESYTRDMVLKFLPDPIHKLEILQKNYQDLYPPDKLVMHLT*
Ga0182116_11273431	3300015335	Switchgrass Phyllosphere	SRGDKKNKINKPLTKINSTESYTRNMVLKFLPEPSHEIKILYKNYQALYSPDKLVMHLT*
Ga0182150_11026832	3300015336	Switchgrass Phyllosphere	YSRGDKQNKNNKPLTKINSTESYTRNMVLKFLPEPIHKLTILQKNDQALYPPDKLVMQLI
Ga0182151_10988671	3300015337	Switchgrass Phyllosphere	MNKFSKLLNKVNSTESYTRDMVLKFLPEPRHQLKLLHKNYQSLYPPDKLVMHLN*
Ga0182137_11276331	3300015338	Switchgrass Phyllosphere	MNKFSKQLNKINSTESYTRDIVLKFLPEPIRKLNIFQKNYQALYHQDKLVIQLTYHELA
Ga0182149_10818891	3300015339	Switchgrass Phyllosphere	NKNSKPLTRINSTESFTRDMVLKFLPEPNNEIIIHYKKLSSLYSQDKLVMQLTQHELA*
Ga0182133_10786181	3300015340	Switchgrass Phyllosphere	MNKFSKPLTKINSTESYTRDMVLKFLPEPNHELEILHKNYQALYHYDKLVM*
Ga0182133_11729021	3300015340	Switchgrass Phyllosphere	ISKLLTKIKSTESYTRDMVLKFLPEPSHEISILQKNYQVLYPPDKLVMQLT*
Ga0182133_11743261	3300015340	Switchgrass Phyllosphere	MNKFSKLLNKINSTESYTRDMVLKLLPEPSHELNIFYKIYQALYQPYKLVMHLT*
Ga0182185_11735971	3300015349	Switchgrass Phyllosphere	MNKFSKPFTKINSTESYTRDMVLKFLPEPSHEIDILQKNYQTLYTPDKLVMHLS*
Ga0182185_12778421	3300015349	Switchgrass Phyllosphere	RGDKMNKFSKPLTKINSTESYARDMVLKFLPKPSNEINILQKHYQGLYPPDKLVMQLT*
Ga0182185_12874952	3300015349	Switchgrass Phyllosphere	LTKINSTESYTRDMVLKFLPDPIHKLEILQKNYQDLYPPDKLVMHLT*
Ga0182163_12731591	3300015350	Switchgrass Phyllosphere	FIHLYSRGDKKNKFGKPLTKINSTESYTGDMILKFLPEPIHKLNIFHKNYKALYPPDKLVVLLT*
Ga0182163_12814061	3300015350	Switchgrass Phyllosphere	TYLYSRSDKMNKISKLLTKIKSIESYTMYMVLKFLPESSHELNILQKNYQALYPLDKLVMQLT*
Ga0182169_11908762	3300015352	Switchgrass Phyllosphere	YTAEVTKKNKFNKILNKINSTESYTRDVVLKFLPEPKHELNILQKNYQALYPPDKLVMHLT*
Ga0182179_11052881	3300015353	Switchgrass Phyllosphere	MNNFSKPLTKINSTESYSRDMVLKFLPEPSHKLNIFQKNCQALYHQDKLVMPLNYHELA*
Ga0182179_12225661	3300015353	Switchgrass Phyllosphere	MNKFSKPLNMIKSTESYTRDMVLKFLPEPSHKLNIFHKNYQASYHQDKLVMQLTYHELA*
Ga0182167_12243501	3300015354	Switchgrass Phyllosphere	IRGDKMNKFSKLLTKINSTESYTRDMVLKFLPEPSHKLNIFHKNYQASYHYDKLVMQLTYHELA*
Ga0182167_12947121	3300015354	Switchgrass Phyllosphere	RGDKNNKNSKPLTKINSTESFTRGMVLKFLPEPNHELNILHKIFQDLNQHDKLVMQLYKHELA*
Ga0182167_13485131	3300015354	Switchgrass Phyllosphere	YLYIRGDKMNKFSKLLNKINSTESYTRVMVLKLLPEPSHELNIFYKNYQALYQPYKLVIHLT*
Ga0182199_11108171	3300017412	Switchgrass Phyllosphere	RLYNXGDKKNKNSKFLNKINSTESFTRVMALKFFPEANHELNILHKIFRDLKQYDKLVMQLT
Ga0182195_11033371	3300017414	Switchgrass Phyllosphere	RGDKKNKISKPLTKINSPESCTMDMVLKFLPEPSKELNILQKNYQALYSPDKLVMLLT
Ga0182195_11593451	3300017414	Switchgrass Phyllosphere	HLYSRGDKKNKFSKLLTKINSTESYIRDMVLKFLLEPIHKLNILQKNYQALYPPDKLVMQLI
Ga0182201_11142911	3300017422	Switchgrass Phyllosphere	YLYIGGDKKNKISQPLTKINSTESCTRDIVLKFLPEPNHELSLFQKNYQALYRQFKLVMQLT
Ga0182196_11137241	3300017432	Switchgrass Phyllosphere	LTKINSTESYTRDMVLKFLPEPSHKLNIFQKNYQALYHQDNLVMQLTYHELA
Ga0182196_11270911	3300017432	Switchgrass Phyllosphere	MNKFSKPLTKINSTESYTRNMVLKFLPEANNEINILQKNFQALYHYYKLVMQLT
Ga0182194_10432062	3300017435	Switchgrass Phyllosphere	KPLTKINSTESFTRDMVLKFLPEPNNEIIIHYKKLSSLYSQDKLVMQLTQHELA
Ga0182214_10819721	3300017440	Switchgrass Phyllosphere	LLTKIKSTESYTRDIVLKFLPEPSHEINILHKNYQALYPPDKLVMQLT
Ga0182198_11380971	3300017445	Switchgrass Phyllosphere	YSRGDKMNKFSKLLNKINSTESYTRYMVLNFLPEPCNEINIFHKNYQALNHQDKLVMQLTYHELA
Ga0182198_11407662	3300017445	Switchgrass Phyllosphere	MNNFSKPLTKIKSTESFTRDMVLKFLPDPIHELNILQKNYQALYQHDKLVMHLT
Ga0182217_11533802	3300017446	Switchgrass Phyllosphere	MNKNSKLLTKIKSTEIYTRDMVLKFLPGPSHELNIICKNYQASHQQDKLVMHLTYHELA
Ga0182215_11224041	3300017447	Switchgrass Phyllosphere	RGDKMNKISELLTMIKSTESYTRDMVLKFLPEPSHELNILQNNYQALYLPYKLVMHLT
Ga0182215_11416861	3300017447	Switchgrass Phyllosphere	NKISKLLTKIKSTESYTRDIVLKFLPEPSHKLNIFHKNYQALYHQDKLVIQLTYHELA
Ga0182215_11532411	3300017447	Switchgrass Phyllosphere	HLYSRGDKMNNFSKPLNKINSIESYTRDMVLNLLPEPSHELNIFHKNYQALY
Ga0182210_11040331	3300017692	Switchgrass Phyllosphere	MNKFSKLLNKINSTEGYTRDMVLKFLPEPINDIKILQKNYQALYSSEKLVMQLT
Ga0182178_10054651	3300020023	Switchgrass Phyllosphere	MNKFSKLLTKINSTESYTRDMVLKFLPEPSHKLNIFHKNYQALYHQDKLVMQLT
Ga0268322_10330901	3300028049	Phyllosphere	MNKISKLLTKIKSTESYTRDMLLKFLPEPIHELNILQKNYQALYQQDKISY
Ga0268344_10124571	3300028051	Phyllosphere	IKINSTESYTGDMILKFLPEPIHKLNIFHKNYQALYPPDKLVMLLT
Ga0268330_10213931	3300028056	Phyllosphere	MNNISKLLNKINSIESYFRYMVLKFLLEFSHELKILPKNYQALYHQDKLVMHLIYHELA
Ga0268330_10291471	3300028056	Phyllosphere	LTKINSTESYTRNMVLKFLPDPSHEICILQKNYQALYSLDKLVMLLT
Ga0268314_10493731	3300028061	Phyllosphere	MNKISKLLTKIKSTESYTRDMVLKFLPEPSHKLNIFHKNYQALYHQDKLVIQLTYHELA
Ga0268334_10099311	3300028140	Phyllosphere	MNKFSKLLNKIKSTESYTRDMVLKFLPEPIHELNILQKNYQALYQQDKISYAVNLT
Ga0268308_10244211	3300028151	Phyllosphere	KKNKFSKLSNMINSTESYTRDMVLKVLPEPSPELNIFQKNYQALYLQDKLVMHLT
Ga0268320_10169431	3300028153	Phyllosphere	SKPLTKINSTESYTRDIILKFLPNPSNELNILQKNYQALYQHNELVMQLT
Ga0268341_10130311	3300028154	Phyllosphere	MNKFSQLLNKINSTKSYTRDMVLKFLPEPSHEPNILQKKNYQALHQPDKLVMHLT
Ga0268341_10267341	3300028154	Phyllosphere	KMNKISKLLNKIKFTESYTRDMVLKFLPEPIHELSTFHKYYQALYQHDKLVMQLT
Ga0268304_10058331	3300028256	Phyllosphere	RSDKINKISKLLTKIKSTESYTMDMVLKFLPESSHELNILQKNYQALYPPDKLVMHLT
Ga0268333_10091071	3300028467	Phyllosphere	MNKFSKILNKINSTVSYTRDMVLKFLPESSHELNIFQKNYQALYHQDNLVMQLTYHELA
Ga0268337_10133431	3300028469	Phyllosphere	LLTKINSTESYTRDMVLKFLPEPINELNILQKNYQALYTPDKLVMLLT
Ga0268307_10201461	3300028470	Phyllosphere	VTKRIKTADHLTKINSPESCTRDMILKFLPEPTHELNILQKNYHALYPPDILAMQLT
Ga0268307_10212091	3300028470	Phyllosphere	ISKLLTKINSIESYTRDMVLKFLPEPRHELNILQKNYQALYPPDKLVMHLT
Ga0268315_10244811	3300028472	Phyllosphere	MNKFSKILNKINSTVSYTRDMVLKFLPESSHELNIFQKNYQALYHQDKLVMQLTYHELA
Ga0268319_10154731	3300028473	Phyllosphere	FSKPLTKINSTESYTRDMVLKFLPEPSHKLNIFHKNYQALYHQDKLVIQLTYHELA
Ga0268331_10107501	3300028474	Phyllosphere	LDFNHIYSRDDQKNKISKPLTKINSPEPSKESCTMDMVLKFLPEPSKEINILQKNYQALYSPDKLVMLLT
Ga0268327_10265281	3300028475	Phyllosphere	RDDKKNKISKPLTKINSPEPSKESCTMDMVLKFLPEPSKELNILQKNYQALYSPDKLVMLLT
Ga0268329_10212311	3300028476	Phyllosphere	KTSKPLTKINSPESCTRDMILKFLPEPNPELDILHKNYQALYSPDKLVMLLT
Ga0268309_10050151	3300028477	Phyllosphere	INKPLNKINSPESCTMDMVLKFLPEPNHEPNILHKNYEALYSPDKLVMLLT
Ga0214497_10263243	3300032689	Switchgrass Phyllosphere	MNKFSKPLTKLNSTESYTRDIVLKFLPDPINKLNIFHKNYQTLYHHDKLVMQLTYNELA
Ga0314746_11523971	3300032758	Switchgrass Phyllosphere	GGDKKNKISKLLSKINFIGSYTRNIVLKFLSDPSDEINILQKNYQALYHYDKLVLQLI
Ga0314726_1259391	3300032918	Switchgrass Phyllosphere	XTKKNKILNKIKSTESYTRDMVLKFLPEPSHELKILQKNYQALSQQDKLVMHLTYHELA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072944

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences