Metagenome Family F072958

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072958
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	63 residues
Representative Sequence	GLSYALAGRKEQAATEFAAFRALAPKWTLSNTQRFWSRYFTPQFSDRIAALSREYGIPEK
Number of Associated Samples	83
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.84 %
% of genes near scaffold ends (potentially truncated)	95.00 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (61.667 % of family members)
Environment Ontology (ENVO)	Unclassified (84.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.32% β-sheet: 0.00% Coil/Unstructured: 55.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01979	Amidohydro_1	10.00
PF00211	Guanylate_cyc	8.33
PF02900	LigB	4.17
PF01850	PIN	4.17
PF09957	VapB_antitoxin	2.50
PF00501	AMP-binding	2.50
PF08818	DUF1801	1.67
PF13432	TPR_16	1.67
PF14559	TPR_19	1.67
PF14499	DUF4437	1.67
PF00589	Phage_integrase	0.83
PF00378	ECH_1	0.83
PF01053	Cys_Met_Meta_PP	0.83
PF07719	TPR_2	0.83
PF02558	ApbA	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	8.33
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.67
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.67
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.67
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.83
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.83
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.83
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.83
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.83
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.83
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.83
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.83
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.83
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.50 %
Unclassified	root	N/A	40.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.33 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.83 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.83 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.00 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.83 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.83 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.17 %
Bradyrhizobium genosp. SA-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	0.83 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.83 %
Collimonas fungivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas fungivorans	0.83 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4.17 %
Collimonas fungivorans Ter331	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas fungivorans → Collimonas fungivorans Ter331	0.83 %
Bradyrhizobium genosp. SA-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	0.83 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.83 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10066308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300004080\|Ga0062385_10488670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300004082\|Ga0062384_100823723	Not Available	650	Open in IMG/M
3300004091\|Ga0062387_100567565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300004633\|Ga0066395_10909482	Not Available	533	Open in IMG/M
3300005610\|Ga0070763_10887622	Not Available	530	Open in IMG/M
3300009792\|Ga0126374_11344380	Not Available	579	Open in IMG/M
3300009792\|Ga0126374_11363896	Not Available	576	Open in IMG/M
3300010048\|Ga0126373_10791127	Not Available	1010	Open in IMG/M
3300010048\|Ga0126373_12940799	Not Available	531	Open in IMG/M
3300010048\|Ga0126373_12945612	Not Available	531	Open in IMG/M
3300010361\|Ga0126378_10801883	Not Available	1051	Open in IMG/M
3300010376\|Ga0126381_105021887	Not Available	507	Open in IMG/M
3300012971\|Ga0126369_11009901	Not Available	920	Open in IMG/M
3300012971\|Ga0126369_12450546	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300016270\|Ga0182036_10962216	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300016294\|Ga0182041_10570403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300016294\|Ga0182041_10822283	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300016319\|Ga0182033_11615894	Not Available	586	Open in IMG/M
3300016341\|Ga0182035_10821399	Not Available	816	Open in IMG/M
3300016341\|Ga0182035_11848031	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300016341\|Ga0182035_11914997	Not Available	538	Open in IMG/M
3300016357\|Ga0182032_10077058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2276	Open in IMG/M
3300016357\|Ga0182032_10351783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300016371\|Ga0182034_11035212	Not Available	710	Open in IMG/M
3300016387\|Ga0182040_10271943	All Organisms → cellular organisms → Bacteria → Proteobacteria	1283	Open in IMG/M
3300016387\|Ga0182040_10456883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300016387\|Ga0182040_11631743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300016404\|Ga0182037_11887886	Not Available	535	Open in IMG/M
3300016404\|Ga0182037_12048783	Not Available	514	Open in IMG/M
3300016422\|Ga0182039_10768157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300017975\|Ga0187782_11386687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas fungivorans → Collimonas fungivorans Ter331	552	Open in IMG/M
3300018090\|Ga0187770_11627306	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300021444\|Ga0213878_10434485	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300031543\|Ga0318516_10553204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	658	Open in IMG/M
3300031543\|Ga0318516_10763339	Not Available	547	Open in IMG/M
3300031543\|Ga0318516_10789493	Not Available	537	Open in IMG/M
3300031544\|Ga0318534_10110068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1580	Open in IMG/M
3300031545\|Ga0318541_10015662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3526	Open in IMG/M
3300031545\|Ga0318541_10031458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2631	Open in IMG/M
3300031546\|Ga0318538_10135591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1293	Open in IMG/M
3300031546\|Ga0318538_10683736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300031549\|Ga0318571_10205062	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300031561\|Ga0318528_10392243	Not Available	745	Open in IMG/M
3300031564\|Ga0318573_10794122	Not Available	509	Open in IMG/M
3300031572\|Ga0318515_10135577	All Organisms → cellular organisms → Bacteria → Proteobacteria	1307	Open in IMG/M
3300031572\|Ga0318515_10645114	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300031573\|Ga0310915_10255350	Not Available	1234	Open in IMG/M
3300031573\|Ga0310915_10366150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1023	Open in IMG/M
3300031573\|Ga0310915_11159423	Not Available	535	Open in IMG/M
3300031640\|Ga0318555_10094094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1573	Open in IMG/M
3300031640\|Ga0318555_10200933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1074	Open in IMG/M
3300031668\|Ga0318542_10224980	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
3300031679\|Ga0318561_10213632	Not Available	1048	Open in IMG/M
3300031679\|Ga0318561_10380844	Not Available	774	Open in IMG/M
3300031679\|Ga0318561_10602361	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300031681\|Ga0318572_10346685	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300031681\|Ga0318572_10571972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300031713\|Ga0318496_10362801	Not Available	800	Open in IMG/M
3300031719\|Ga0306917_10352119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1145	Open in IMG/M
3300031723\|Ga0318493_10825465	Not Available	523	Open in IMG/M
3300031724\|Ga0318500_10235911	All Organisms → cellular organisms → Bacteria → Proteobacteria	884	Open in IMG/M
3300031724\|Ga0318500_10535902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	590	Open in IMG/M
3300031736\|Ga0318501_10057205	Not Available	1844	Open in IMG/M
3300031736\|Ga0318501_10628585	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031744\|Ga0306918_10180690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1579	Open in IMG/M
3300031747\|Ga0318502_10543139	Not Available	698	Open in IMG/M
3300031763\|Ga0318537_10354068	Not Available	542	Open in IMG/M
3300031764\|Ga0318535_10315074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300031768\|Ga0318509_10297675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300031769\|Ga0318526_10430575	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300031778\|Ga0318498_10519708	Not Available	523	Open in IMG/M
3300031782\|Ga0318552_10168639	Not Available	1103	Open in IMG/M
3300031782\|Ga0318552_10381363	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300031782\|Ga0318552_10443655	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300031782\|Ga0318552_10664331	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300031782\|Ga0318552_10709873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300031792\|Ga0318529_10348216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300031793\|Ga0318548_10178098	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300031795\|Ga0318557_10196188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	921	Open in IMG/M
3300031796\|Ga0318576_10178964	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300031799\|Ga0318565_10396931	Not Available	669	Open in IMG/M
3300031805\|Ga0318497_10023752	Not Available	3006	Open in IMG/M
3300031833\|Ga0310917_10214870	Not Available	1288	Open in IMG/M
3300031835\|Ga0318517_10254683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300031845\|Ga0318511_10612083	Not Available	508	Open in IMG/M
3300031859\|Ga0318527_10243215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300031879\|Ga0306919_10296454	Not Available	1226	Open in IMG/M
3300031890\|Ga0306925_11946171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300031893\|Ga0318536_10105407	Not Available	1416	Open in IMG/M
3300031893\|Ga0318536_10377647	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300031894\|Ga0318522_10082052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300031894\|Ga0318522_10425072	Not Available	503	Open in IMG/M
3300031897\|Ga0318520_10913018	Not Available	553	Open in IMG/M
3300031910\|Ga0306923_10042071	All Organisms → cellular organisms → Bacteria → Proteobacteria	4995	Open in IMG/M
3300031912\|Ga0306921_12005214	Not Available	616	Open in IMG/M
3300031942\|Ga0310916_11542819	Not Available	541	Open in IMG/M
3300031945\|Ga0310913_10624631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	763	Open in IMG/M
3300031945\|Ga0310913_10899470	Not Available	623	Open in IMG/M
3300031946\|Ga0310910_11278496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	567	Open in IMG/M
3300031947\|Ga0310909_10096016	All Organisms → cellular organisms → Bacteria → Proteobacteria	2375	Open in IMG/M
3300031947\|Ga0310909_10415939	Not Available	1129	Open in IMG/M
3300031954\|Ga0306926_10095433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3640	Open in IMG/M
3300032001\|Ga0306922_10123518	All Organisms → cellular organisms → Bacteria → Proteobacteria	2754	Open in IMG/M
3300032001\|Ga0306922_11253123	Not Available	752	Open in IMG/M
3300032043\|Ga0318556_10044276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2130	Open in IMG/M
3300032052\|Ga0318506_10525166	Not Available	524	Open in IMG/M
3300032059\|Ga0318533_10442916	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
3300032059\|Ga0318533_10575079	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300032065\|Ga0318513_10366162	Not Available	703	Open in IMG/M
3300032068\|Ga0318553_10253249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300032090\|Ga0318518_10303758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	819	Open in IMG/M
3300032091\|Ga0318577_10313363	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300032094\|Ga0318540_10168073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1053	Open in IMG/M
3300032094\|Ga0318540_10421276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300032180\|Ga0307471_102936076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300032261\|Ga0306920_104310034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300032261\|Ga0306920_104356088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300033289\|Ga0310914_10641860	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.67%
Aquatic	Environmental → Aquatic	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.67%
Freshwater	Environmental → Aquatic → Freshwater	3.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.67%
Loam	Environmental → Terrestrial → Soil → Loam	1.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	85.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	61.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.67%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100663082	3300003218	Bog Forest Soil	PDIRLWLAMSYALAGRKEQAAAEFAALRALAPTFTVAIGRRLSPGYFEPQFLDRIAALSGEYGIPEK*
Ga0062385_104886702	3300004080	Bog Forest Soil	LAMSYALAGRKEQAAAEFAALRALAPTFTVAIGRRLSPGYFEPQFLDRIAALSGEYGIPEK*
Ga0062384_1008237231	3300004082	Bog Forest Soil	SYALAGRKEQAAAEFAAFRALAPKWTVATARRFWARYYTPQFSDRIAALSLEYGIPEK*
Ga0062387_1005675651	3300004091	Bog Forest Soil	WLAMSYALAGRKEQAAAEFAALRALAPTFTVAIGRRLSPGYFEPQFLDRIAALSGEYGIPEK*
Ga0066395_109094821	3300004633	Tropical Forest Soil	YWLGLSYALAGRKENAAAEFAEFRGLAPKWTLSTTKRFWARYYAPQFADRIAALSREYGIPEK*
Ga0070763_108876223	3300005610	Soil	SVPAVRFWLGLSYALAGRKEHAATEFAAFRALAPKWNLSTTQRLWYRYFTPQFSDRVAALSREYGIPGK*
Ga0126374_113443801	3300009792	Tropical Forest Soil	VPAVRFWLGLSYALAGRKEHAAAEFAAFRALAPKWNLSTTRRLWYRYFTPQFSDRVAALSREYGIPGQ*
Ga0126374_113638961	3300009792	Tropical Forest Soil	VPAVRFWLGLSYALAGRKEHAAAEFAAFRALAPKWNLSTTQRLWYRYFTPQFSDRVAALSREYGIPGK*
Ga0126373_107911271	3300010048	Tropical Forest Soil	RKVPTVRFWLGLSYALAGRKEHAAAEFAAFRTLAPKWNLSTTQRLWYRYFTPQFSDRVAALSREYGIPGK*
Ga0126373_129407991	3300010048	Tropical Forest Soil	GLSYALAGRKEQAATEFAAFRALAPKWTLSNTQRFWSRYFTPQFSDRIAALSREYGIPEK
Ga0126373_129456122	3300010048	Tropical Forest Soil	YALDGRKEQASAEFAAFRELAPKWTPSTAKRFWSRYFAPQFSDRITALSREYGIPDK*
Ga0126378_108018832	3300010361	Tropical Forest Soil	AGRKERAAAEFAALRALAPKLTLSTTQRYWSRYFTPQFADRIAALSREYGIPKE*
Ga0126381_1050218871	3300010376	Tropical Forest Soil	LAGRKEQAAGEFTAFRALAPKWTLSNTQRFRSRYFTPQFADRLAALSREYGIPEK*
Ga0126369_110099011	3300012971	Tropical Forest Soil	WRSVPAVRFWLGLSYALAGRKEQAAAEFSAFRSLAPKWTPSTTQRIWSRYFGLQFADRIAALSREYGIPGK*
Ga0126369_124505462	3300012971	Tropical Forest Soil	WLALSYALAGRKENAAAEFAAFRALAPKWTLSTTKRFWARYYTPQFSDRIAALSREYGIPEK*
Ga0182036_109622162	3300016270	Soil	VPAVRLWLGLSYALAGRKEHAAAEFAAFRALAPSWTLSTTQRFSARYFTPQFADRIAALSREYGVPDK
Ga0182041_105704032	3300016294	Soil	SYALAGRKDQAATEFAAFRALVPKWTLSTVQRLWSRYFGSKFSDRIVALSREFGIPEK
Ga0182041_108222831	3300016294	Soil	MSYALAGRKEQAAEELAAFRARAPKFKLSTLQRNWSRYFTHQFFDRIATLSREYGIPEK
Ga0182033_116158941	3300016319	Soil	ALSYARAGRREQAAAEFAAFRSLAPKYTVSIARRDYSGYFEPKFVDRIAALSLEYGIPEK
Ga0182035_108213992	3300016341	Soil	WRSVPGVRLWLGMSYALGARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0182035_118480311	3300016341	Soil	ADRKEEAAAEFAAFRALAPKWTSSTTQRNWSRYFGPQFFDRIVALSREYGIPEKRPPRQ
Ga0182035_119149972	3300016341	Soil	RLWLALSYALAGRKEQAAAEFAAFRALAPKWTLSPTQRFWSRYFTQQFLDRIAALSLEYGIPEK
Ga0182032_100770581	3300016357	Soil	TVRFWLGLSYALAGRKEQAAAEFAAFRALAPKRTLATAKRSWARYYTPQFSDRVIALSREYGIPEK
Ga0182032_103517832	3300016357	Soil	ALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPQFADRIAALSREYGIPEK
Ga0182034_110352121	3300016371	Soil	LSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0182040_102719432	3300016387	Soil	WLGLSYALAGRKEHAAAEFAAFRALAPKWTLSNTQRFRSRYFTPQFSNRIAALSREYSIPEN
Ga0182040_104568832	3300016387	Soil	GLSYALAGRKEHAAAEFAAFRALAPKWTLPTTQRFWSRYFGTEFSDRIVALSREYGIPEK
Ga0182040_116317432	3300016387	Soil	RSDPAVRVWLGLSYALAGRKEQAAPEFSAFRALAPKRTLSYWRRVWSRYYTPQFADRILALSREYGIPEK
Ga0182037_118878861	3300016404	Soil	PAVRFWLGLSYALAGRKEHAAAEFAAFRALAPKWTLPTTQRFWSRYFGTEFSDRIVALSREYGIPEK
Ga0182037_120487831	3300016404	Soil	HWRSAPDARIWLALSYALAGRKEQAAAEFAALRALAPKYTAAIERRYLGPFAPQFSDRVLALSREYGIPEK
Ga0182039_107681572	3300016422	Soil	AGRKEQAATEFAAFRALAPKWTLSTAQRFWAHYFTPRFSDRLAALSREYGIPEK
Ga0187782_113866871	3300017975	Tropical Peatland	MSYALAGRKEQAGAEFAAFRALAPKYTVAIAQRGDYAGYFAPKFFDRIAALLREHGIPEK
Ga0187770_116273061	3300018090	Tropical Peatland	YALAGRKDQAAAEFAAFRALAPKYTVAIARRGDYAGYFAPKFFDRIAALLREYGIPEK
Ga0213878_104344851	3300021444	Bulk Soil	SVPMVQFWLAMSYALAGRKDQAAAEFAAFRALAPKYTVAIAHRGDYSGHFAPKFFDRIAALLREYGIPEK
Ga0318516_105532042	3300031543	Soil	SYALAGRKEQAAAEFAAFRALAPKWTLATAKRSWARYYTPQFSDRVIALSREYGIPEK
Ga0318516_107633391	3300031543	Soil	FWLGLSYALAGRKEHAAAEFAAFRALAPKWNLSTTQRLWYRYFTPQFSDRVAALSREYGIPGK
Ga0318516_107894931	3300031543	Soil	RSAPLVRFWLALSYALAGRKEQAATEFAAFRVLAPKWTLSTTRRNWDRRFGPQFSDRIIALSREYGIPEK
Ga0318534_101100681	3300031544	Soil	WRSVPTVRFWLGLSYALAGRKEQAAAEFAAFRALAPKWTLATAKRSWARYYTPQFSDRVIALSREYGIPEK
Ga0318541_100156621	3300031545	Soil	LGLSYALAGRKEEAAGEFAAFRALAPKWTLSTTQRYWSRYFTPQFFDRIAALARESGIPE
Ga0318541_100314583	3300031545	Soil	SYALAGRKEQAAAEFAAFRALAPKWKLSTTQRLWGRYYTPQFSDRIAALSREYSIPEN
Ga0318538_101355912	3300031546	Soil	YALAGRKEQAATEFAAFRVLAPKWTLSTTRRNWDRRFGPQFSDRIIALSREYGIPEK
Ga0318538_106837362	3300031546	Soil	RNAPAVRFWLGLSYALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPEFADRIAALSQEYGIPEK
Ga0318571_102050622	3300031549	Soil	PAVRFWLGLSYALAGRKEHAAAEFAAFRALAPKWTLSTAKRFWDRYFAPQFADRIAALSREYGIPKK
Ga0318528_103922432	3300031561	Soil	VAERPCVRLWLGLSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0318573_107941221	3300031564	Soil	GRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPQFADRIAALSREYGIPEK
Ga0318515_101355771	3300031572	Soil	FWLGLSYALAGRKEQARAEFAALRALAPKLTLSTTQRYWSRYFTPQFADRIAALSREYGIPKE
Ga0318515_106451142	3300031572	Soil	EIRFWLGVSYALAGRKEQAAAEFAAFRELAPKWTLATAKRFWARYYTPQFSDHIAALSREYSIPEN
Ga0310915_102553501	3300031573	Soil	FWLALSYALAGRKDQAVTEFAAFRELAPKWTLSRTQRNWSRYFTPQFFDRIAALSREYGIPEK
Ga0310915_103661502	3300031573	Soil	QWRNSPVACYWLALSYALAGRKEEAAAKFAAFRALAPKFKLSTVQRNWSRYFTHQFFDRIATLSREYGIPEK
Ga0310915_111594231	3300031573	Soil	RLWLALSYARAGRREQAAAEFAAFRALAPKFTVSIVRRDYSGYFEPKFFDRIVALSLEYGIPEK
Ga0318555_100940944	3300031640	Soil	WRSVPQIRLWLALSYARAGRREQAAAEFAAFRALAPKFTVSIVRRDYSGYFEPKFFDRIVALSLEYGIPEK
Ga0318555_102009332	3300031640	Soil	RSVPTVRFWLGLSYALAGRKEQAAAEFAAFRALAPKWTLATAKRSWARYYTPQFSDRVIALSREYGIPEK
Ga0318542_102249801	3300031668	Soil	PCVRLWLGLSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0318561_102136321	3300031679	Soil	PQWRSVPAVRLWLGLSYALAGRKEEAAGEFAAFRALAPKWTLSTTQRYWSRYFTPQFFDRIAALARESGIPEK
Ga0318561_103808442	3300031679	Soil	PAVRFWLGLSYALAGRKEHAATEFAAFRALAPKWNLSTTQRLWYRYFTPQFSDRVAALSREYGIPGK
Ga0318561_106023612	3300031679	Soil	WRRVPWVRLWLGLSYALGGRKEQAAAEFAAFRALAPKWTLSTAKRFWELYFTPQFADRIVALSREYGVAEK
Ga0318572_103466852	3300031681	Soil	VRLWLGLSYALAGRKEQAAAEFAAFRALAPKWTLSNTQRFWARYFTPQFSDRVLALSREYGIPEK
Ga0318572_105719721	3300031681	Soil	SYALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPQFADRIAALSREYGIPEK
Ga0318496_103628012	3300031713	Soil	PTVRFWLGLSYALAGRKEQAAAEFAAFRALAPKWTLATAKRSWARYYTPQFSDRVIALSREYGIPEK
Ga0318496_105053662	3300031713	Soil	GPLQWRSVPQIRLWLALSYARAGRREQAAAEFAAFRALAPKFTVSIVRRDYSGYFEPKFFDRIVALSLEYGIPEK
Ga0306917_103521192	3300031719	Soil	LWLGLCYALAGRKEEAAKEFAAFRALAPNWTLSTAQRNWSRYFGPEFSDRIIALSREYDIPEQ
Ga0318493_108254651	3300031723	Soil	AVRFWLGLSYALAGRKEQAAAEFGAFRALAPKWTLSSTQRYLSRYFTPQFSDRIAALSREYGVPEK
Ga0318500_102359111	3300031724	Soil	PGVRLWLGLSYALAGRKEQAAAEFAAFRALAPKWTLSNTQRFWARYFTPQFSDRVLALSREYGIPEK
Ga0318500_105359021	3300031724	Soil	LAGRKEQAAPEFSAFRALAPKRTLSYWRRVWSRYYTPQFADRILALSREYGIPEK
Ga0318501_100572051	3300031736	Soil	PAVRFWLGLSYALAGRKEQAAAEFGAFRALAPKWTLSSTQRYWSRYFTPQFSDRIAALSREYGVPEK
Ga0318501_106285852	3300031736	Soil	PQWRSAPLVRFWLGLSYALAGRKDQATAEFAAFRALAPKWTLATTQRNWSRYFTPQFFDRIAALSQEYGIPEK
Ga0306918_101806901	3300031744	Soil	LSYALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPQFADRIAALSREYGIPEK
Ga0318502_105431391	3300031747	Soil	PAVRFWLALSYALAGRKENAAAEFAAFRALAPKWTLSTTKRFWARYYTPQFSDRIAALSREYGIPEK
Ga0318537_103540681	3300031763	Soil	PGVRLWLGLSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0318535_103150742	3300031764	Soil	RKEQAATEFAAFRALAPKWTLSTAQRFWAHYFTPRFSDRLAALSREYGIPEK
Ga0318509_102976752	3300031768	Soil	RFWLGLSYALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPQFADRIAALSREYGIPEK
Ga0318526_104305752	3300031769	Soil	YALAGRKEHAAAEFAAFRALAPSWTLSTTQRFSARYFTPQFADRIAALSREYGVPDK
Ga0318498_105197081	3300031778	Soil	WLGLSYGLADRKEQAAAEFSAFRALAPKWTLATAKRFWARYYTPQFSDHIAALSREYGIPKK
Ga0318552_101686391	3300031782	Soil	LGLSYALAGRKEHAAAEFAAFRALAPSWTLSTTQRFSARYFTPQFADRIAALSREYGVPD
Ga0318552_103813631	3300031782	Soil	SYALAGRKEHAAAEFAAFRALAPKWTLSTAKHFWDRYFAPQFADRIAALSREYGIPEK
Ga0318552_104436551	3300031782	Soil	PAVRFWLGLSYALAGRKEQAAAEFAGFRALAPKWTLSATQRLWARYFTPQFSDRLATLSREYGIPEE
Ga0318552_106643311	3300031782	Soil	VPGVRLWLGLSYALAGRKEQAAAEFAAFRALAPKWTLSNTQRFWARYFTPQFSDRVLALSREYGIPEK
Ga0318552_107098732	3300031782	Soil	WRSDPAVRVWLGLSYALAGRKEQAAPEFVAFRALAPKRTLSYWRRVWSRYYTPQFTDRILALSREYGIPEK
Ga0318529_103482161	3300031792	Soil	RSVPEIRLWLGLCYALAGRKEEAAKEFAAFRALAPKWTLSTAQRNWSRYFGPEFSDRIIALSREYDIPEQ
Ga0318548_101780984	3300031793	Soil	AAAEFAAFRALAPKFTVSIVRRDYSGYFEPKFFDRIVALSLEYGIPEK
Ga0318557_101961881	3300031795	Soil	SYARAGRREQAAAEFAAFRALAPKFTVSIVRRDYSGYFEPKFFDRIVALSLEYGIPEK
Ga0318576_101789641	3300031796	Soil	LWLALSYALAGRKEQAAAEFAAFRALAPKWTLSPTQRFWSRYFTQQFLDRIAALSLEYGIPEK
Ga0318565_103969311	3300031799	Soil	PQWRSVPGVRLWLGLSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0318497_100237521	3300031805	Soil	LGLSYALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPQFADRIAALSREYGIPE
Ga0310917_102148701	3300031833	Soil	MSEVKLSSGLWLGLSYALAARKDQAAAEFAAFRALAPKWTLPTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0318517_102546832	3300031835	Soil	SYALAGRKEQAAPEFSAFRALAPKRTLSYWRRVWSRYYTPQFADRILALSREYGIPEK
Ga0318511_106120831	3300031845	Soil	SYALTDRKEQAAAEFSAFRSLAPKWTLSTTQRIWSRYFGPQFADRIAALSREYGIPGK
Ga0318527_102432152	3300031859	Soil	GLSYALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPQFADRIAALSREYGIPEK
Ga0306919_102964542	3300031879	Soil	MSEVKLSSGLWLGLSYALAARKDQAAAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0306925_119461712	3300031890	Soil	VRIWLGLSYALAGRKEQATAEFAAYRALAPKRTLSYLRPFWSRYYAPQFADRILALSREYGIPEK
Ga0318536_101054072	3300031893	Soil	RIWLGLSYALAGRKEQAAPEFSAFRALAPKRTLSYWRRVWSRYYTPQFADRILALSREYGIPEK
Ga0318536_103776471	3300031893	Soil	RSVPGVRLWLGLSYALAGRKEQAAAEFAAFRALAPKWTLSNTQRFWARYFTPQFSDRVLALSREYGIPEK
Ga0318522_100820521	3300031894	Soil	RKEEAAAKFAAFRALAPKFKLSTVQRNWSRYFTRPFFDRIAALSREYGIPEK
Ga0318522_104250721	3300031894	Soil	AVRFWLGLSYALAGRKEHAAAEFAAFRALAPKWNLSTTQRLWYRYFTPQFSDRVAALSREYGIPGK
Ga0318520_109130181	3300031897	Soil	SYALAGRKEHAATEFAAFRALAPKWNLSTTQRLWYRYFTPQFSDRVAALSREYGIPGK
Ga0306923_100420714	3300031910	Soil	LAGRKEQAAAEFAAFRALAPKWTLATAKRSWARYYTPQFSDRVIALSREYGIPEK
Ga0306921_120052141	3300031912	Soil	RLWLALSYALAGRRERAGAEFAAFRALAPKWTLSTTRRFWDRCFGPEFSDRIVALSREYGIPEK
Ga0310916_115428191	3300031942	Soil	SYARAGRREQAAAEFAAFRALAPKFTVSIVRRDYSGYFEPKFVDRIAALSLEYGIPEK
Ga0310913_106246312	3300031945	Soil	LWLGLSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0310913_108994701	3300031945	Soil	QWPSAPAVRFWLGLSYALAGRKENAAAEFAAFRALAPKWTLSDAQRFWSRYFTPQFADRIAALSREYGIPG
Ga0310910_112784962	3300031946	Soil	FWLALSYALAGRKEEAAAKFAAFRALAPKFKLSTVQRNWSRYFTHQFFDRIATLSREYGIPEK
Ga0310909_100960164	3300031947	Soil	RLWLGLSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0310909_104159391	3300031947	Soil	VRFWLGLSYALAGRKEHAATEFAAFRTLAPKWNLSTTERLWYRYFTPQFSDRVGALSREYGIPGK
Ga0306926_100954331	3300031954	Soil	PEVRLWLALSYALAGRKEQAAVEFAAFRSLAPKWTLSTTQRFWARYFTPQFFDRIAALSQEYGIPEK
Ga0306922_101235181	3300032001	Soil	GLSYALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPEFADRIAALSQEYGIPEK
Ga0306922_112531232	3300032001	Soil	PMGRFWLALSYALAGRKDQAVTEFAAFRELAPKWTLSRTQRNWSRYFTPQFFDRIAALSREYGIPEK
Ga0318556_100442761	3300032043	Soil	SYALAGRKEEAAGEFAAFRALAPKWTLSTTQRYWSRYFTPQFFDRIAALARESGIPEK
Ga0318506_105251661	3300032052	Soil	RFWLGLSYALAGRKENAAGEFAAFRALAPKWTLSDAQRFWSRYFTPQFADRIAALSREYGIPG
Ga0318533_104429162	3300032059	Soil	RSVPAVRFWLGLSYALAGRKEHAAAEFAAFRALAPKWTLSTAKRFWDRYFAPQFADRIAALSREYGLPKK
Ga0318533_105750791	3300032059	Soil	RSAPEIRFWLGLSYALAGRKEQAAAEFAAFRALAPKWKLSTTQRLWGRYFTPQFSERVAALSHEYGIPEK
Ga0318513_103661621	3300032065	Soil	RLWLGLSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSCEYGIPEK
Ga0318553_102532491	3300032068	Soil	VPAVRFWLGLSYALAGRKEQAATEFAAFRALAPKWTLSTAQRFWAHYFTPRFSDRLAALSREYGIPEK
Ga0318518_103037581	3300032090	Soil	VPTVRVWLGLSYALAGRKEQAAAEFAAFRALAPKWTLATAKRSWARYYTPQFSDRVIALSREYGIPEK
Ga0318577_103133631	3300032091	Soil	SYALAGRKEQAAGEFAAFRALAPKVTLSTPQRFWSRYFGSKFSDRIAALSREYGVSDK
Ga0318540_101680731	3300032094	Soil	WRSVPGVRLWLGLSYALAARKDQAVAEFAAFRALAPKWTLSTAQRFWARYFGSRFSDRIVALSREYGIPEK
Ga0318540_104212761	3300032094	Soil	FWLGLSYALAGRKEHAAAEFAAFRALAPKWARSSTQRYWSRYFTPQFADRIAALSREYGIPEK
Ga0307471_1029360761	3300032180	Hardwood Forest Soil	HWRSAPDTRIWLAPSYALAGRKEQAAAEFAALRALAPKYTVAIERHYLSPFTPQFSDRVAALSREYGIPEK
Ga0306920_1043100342	3300032261	Soil	FWLGLSYALAGRKEQATAEFAAFRALAPKWTLSTTQRLWARYFTPQFADRIAALPREYGIPDK
Ga0306920_1043560881	3300032261	Soil	WLGLSYALASRQEQAAAEFAAFRALAPKWTLTATQRSWSRYFGPQFSDRIAALSREYGIPEK
Ga0310914_106418602	3300033289	Soil	WLGLSYALAGRKEQAAAEFAAFRALAPKWKLSTTQRLWGRYYTPQFSDRIAALSREYSIPEN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072958

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences