Metagenome / Metatranscriptome Family F072966

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072966
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	60 residues
Representative Sequence	MAQSVLEQTGEQIAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEELLDDTKKRL
Number of Associated Samples	98
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.09 %
% of genes near scaffold ends (potentially truncated)	87.50 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (28.333 % of family members)
Environment Ontology (ENVO)	Unclassified (38.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.91% β-sheet: 0.00% Coil/Unstructured: 34.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05532	CsbD	72.50
PF13545	HTH_Crp_2	5.00
PF11752	DUF3309	0.83
PF13401	AAA_22	0.83
PF00210	Ferritin	0.83
PF05598	DUF772	0.83
PF13911	AhpC-TSA_2	0.83
PF01784	NIF3	0.83
PF00873	ACR_tran	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	72.50
COG0327	Putative GTP cyclohydrolase 1 type 2, NIF3 family	Coenzyme transport and metabolism [H]	0.83
COG3323	PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
All Organisms	root	All Organisms	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
cellular organisms	root	All Organisms → cellular organisms	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.17 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.33 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.50 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.50 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.83 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.67 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.83 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105018206	Not Available	782	Open in IMG/M
3300003218\|JGI26339J46600_10044191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1213	Open in IMG/M
3300003219\|JGI26341J46601_10134867	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005602\|Ga0070762_10975963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	580	Open in IMG/M
3300005938\|Ga0066795_10203002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	589	Open in IMG/M
3300005947\|Ga0066794_10261373	Not Available	519	Open in IMG/M
3300005995\|Ga0066790_10509375	Not Available	514	Open in IMG/M
3300006102\|Ga0075015_100813199	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300009634\|Ga0116124_1091541	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300009635\|Ga0116117_1198512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300009698\|Ga0116216_10654286	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300010339\|Ga0074046_10041377	All Organisms → cellular organisms → Bacteria	3096	Open in IMG/M
3300010341\|Ga0074045_10142274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1634	Open in IMG/M
3300010341\|Ga0074045_10649871	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300010341\|Ga0074045_10717068	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300010343\|Ga0074044_10531536	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300010379\|Ga0136449_102555086	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300014151\|Ga0181539_1109485	Not Available	1150	Open in IMG/M
3300014200\|Ga0181526_10026267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	3794	Open in IMG/M
3300014492\|Ga0182013_10570445	Not Available	580	Open in IMG/M
3300014496\|Ga0182011_10436516	Not Available	850	Open in IMG/M
3300014498\|Ga0182019_10332028	Not Available	1022	Open in IMG/M
3300014498\|Ga0182019_11439324	Not Available	512	Open in IMG/M
3300014501\|Ga0182024_10216254	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300014502\|Ga0182021_13601314	Not Available	515	Open in IMG/M
3300014657\|Ga0181522_11073500	Not Available	500	Open in IMG/M
3300014838\|Ga0182030_10569006	Not Available	1104	Open in IMG/M
3300014839\|Ga0182027_11229807	Not Available	751	Open in IMG/M
3300017935\|Ga0187848_10052625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1953	Open in IMG/M
3300017935\|Ga0187848_10359654	Not Available	602	Open in IMG/M
3300018002\|Ga0187868_1251329	Not Available	596	Open in IMG/M
3300018009\|Ga0187884_10033886	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2516	Open in IMG/M
3300018018\|Ga0187886_1291863	Not Available	609	Open in IMG/M
3300018022\|Ga0187864_10120694	Not Available	1334	Open in IMG/M
3300018024\|Ga0187881_10166428	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300018025\|Ga0187885_10193841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300018035\|Ga0187875_10554386	Not Available	608	Open in IMG/M
3300018040\|Ga0187862_10519931	Not Available	714	Open in IMG/M
3300018046\|Ga0187851_10145824	Not Available	1436	Open in IMG/M
3300021407\|Ga0210383_11618616	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300022524\|Ga0224534_1065417	Not Available	700	Open in IMG/M
3300022861\|Ga0224528_1023958	Not Available	1347	Open in IMG/M
3300022872\|Ga0224526_1002370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	6122	Open in IMG/M
3300023101\|Ga0224557_1203286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	687	Open in IMG/M
3300024295\|Ga0224556_1111572	Not Available	669	Open in IMG/M
3300025444\|Ga0208189_1071621	Not Available	631	Open in IMG/M
3300025464\|Ga0208076_1030262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	944	Open in IMG/M
3300025533\|Ga0208584_1151266	Not Available	526	Open in IMG/M
3300025725\|Ga0209638_1229110	Not Available	542	Open in IMG/M
3300025878\|Ga0209584_10080342	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300026502\|Ga0255350_1113180	Not Available	580	Open in IMG/M
3300026502\|Ga0255350_1128352	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300027812\|Ga0209656_10034212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2984	Open in IMG/M
3300027812\|Ga0209656_10473192	Not Available	551	Open in IMG/M
3300027824\|Ga0209040_10479421	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300028090\|Ga0255349_1105892	Not Available	503	Open in IMG/M
3300028560\|Ga0302144_10164338	Not Available	718	Open in IMG/M
3300028746\|Ga0302233_10278049	Not Available	634	Open in IMG/M
3300028748\|Ga0302156_10229546	Not Available	858	Open in IMG/M
3300028766\|Ga0302269_1237359	Not Available	506	Open in IMG/M
3300028776\|Ga0302303_10294438	Not Available	548	Open in IMG/M
3300028785\|Ga0302201_10047078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2163	Open in IMG/M
3300028785\|Ga0302201_10228859	Not Available	761	Open in IMG/M
3300028785\|Ga0302201_10331491	Not Available	601	Open in IMG/M
3300028785\|Ga0302201_10405245	Not Available	528	Open in IMG/M
3300028867\|Ga0302146_10037261	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300028874\|Ga0302155_10091440	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300028874\|Ga0302155_10224984	Not Available	815	Open in IMG/M
3300028909\|Ga0302200_10440215	Not Available	601	Open in IMG/M
3300029817\|Ga0247275_1172609	Not Available	534	Open in IMG/M
3300029883\|Ga0311327_10893851	Not Available	513	Open in IMG/M
3300029907\|Ga0311329_10940503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300029914\|Ga0311359_10537606	Not Available	879	Open in IMG/M
3300029914\|Ga0311359_10798888	Not Available	661	Open in IMG/M
3300029915\|Ga0311358_10643880	Not Available	790	Open in IMG/M
3300029916\|Ga0302148_1018634	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300029922\|Ga0311363_10514349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1212	Open in IMG/M
3300029944\|Ga0311352_10188413	Not Available	1765	Open in IMG/M
3300029953\|Ga0311343_10078262	All Organisms → cellular organisms → Bacteria	3917	Open in IMG/M
3300029953\|Ga0311343_10572920	Not Available	978	Open in IMG/M
3300029985\|Ga0302280_1219985	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300029985\|Ga0302280_1324737	Not Available	506	Open in IMG/M
3300029992\|Ga0302276_10467207	Not Available	505	Open in IMG/M
3300029997\|Ga0302302_1350933	Not Available	523	Open in IMG/M
3300030004\|Ga0302186_10166087	Not Available	774	Open in IMG/M
3300030011\|Ga0302270_10312546	Not Available	861	Open in IMG/M
3300030019\|Ga0311348_10223544	Not Available	1402	Open in IMG/M
3300030044\|Ga0302281_10388521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	540	Open in IMG/M
3300030049\|Ga0302191_10038959	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300030049\|Ga0302191_10367487	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300030399\|Ga0311353_10409972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1217	Open in IMG/M
3300030399\|Ga0311353_10969689	Not Available	714	Open in IMG/M
3300030508\|Ga0302185_10043645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1800	Open in IMG/M
3300030508\|Ga0302185_10064290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1389	Open in IMG/M
3300030508\|Ga0302185_10262872	Not Available	582	Open in IMG/M
3300030519\|Ga0302193_10075301	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300030688\|Ga0311345_11192226	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300030760\|Ga0265762_1091303	Not Available	665	Open in IMG/M
3300030805\|Ga0265756_109281	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300030805\|Ga0265756_115313	Not Available	531	Open in IMG/M
3300031041\|Ga0265755_105172	Not Available	749	Open in IMG/M
3300031234\|Ga0302325_10699223	Not Available	1460	Open in IMG/M
3300031238\|Ga0265332_10202689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	824	Open in IMG/M
3300031239\|Ga0265328_10405868	Not Available	535	Open in IMG/M
3300031261\|Ga0302140_10161330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2100	Open in IMG/M
3300031708\|Ga0310686_119426624	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	597	Open in IMG/M
3300031788\|Ga0302319_10435087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1443	Open in IMG/M
3300031788\|Ga0302319_10718745	Not Available	1008	Open in IMG/M
3300033402\|Ga0326728_10093056	All Organisms → cellular organisms → Bacteria	3719	Open in IMG/M
3300034199\|Ga0370514_146921	Not Available	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.67%
Host-Associated	Host-Associated	3.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.83%
Aquatic	Environmental → Aquatic	20.83%
Plants	Host-Associated → Plants	3.33%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	48.33%
Soil	Environmental → Terrestrial → Soil	27.50%
Freshwater	Environmental → Aquatic → Freshwater	20.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.50%
Sediment	Environmental → Aquatic → Sediment	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	48.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	11.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	48.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.33%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	28.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.50%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.67%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.17%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.17%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.67%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.67%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022861	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030805	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031041	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033544	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5	Host-Associated	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1050182063	3300000364	Soil	MAESLDKTGEQVTATANKASRAASAVADALEGGVEAARRVAKQGGDAAEEFLDDTTKRLQRHP
JGI26339J46600_100441914	3300003218	Bog Forest Soil	MAQSVLEQTGEQIAETARKASRAASAVGDALEDGVGVARRFAKQGGDAAEE
JGI26341J46601_101348671	3300003219	Bog Forest Soil	MTQSVLEQTGEQIAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEELF*
Ga0070762_109759631	3300005602	Soil	MLQSVVDKTGNQIAETARKTSRAASAVADAFQDGVEAARRVAKQGGDAAEELFDDTA
Ga0066795_102030023	3300005938	Soil	MAQSVLEQTGEQIAETARKASRAAAAVGDALEDGVGIARRFAKQGGDAAEELLDDTKKRLQRHPIE
Ga0066794_102613731	3300005947	Soil	MAESRLEQTGEQIAATARKASRAASAVADALEDGLGVARRVAKRGGDAAEELLDDTKTRLQRHPI
Ga0066790_105093752	3300005995	Soil	MTQSVLDQAGEQITETARKASRASSAVADAFEDGVEVARRAAKQSGDAAEEFLNDTTKRLQRH
Ga0075015_1008131991	3300006102	Watersheds	MTQSVLERTGEQIEATARKASRATSAVADAFGDGVEAARRAAKQGGDAAEEFVDDTTRRLQRHP
Ga0116124_10915413	3300009634	Peatland	MIQSVLERTGDQVAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEEFIDDTTRRL
Ga0116117_11985122	3300009635	Peatland	MMQSVLERTGEQVAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEEFIDDTT
Ga0116216_106542863	3300009698	Peatlands Soil	MAQSVLEQTGEQIAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEELLDDTKKRL
Ga0074046_100413776	3300010339	Bog Forest Soil	DIMTQSVLEQTGEQIAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEELF*
Ga0074045_101422744	3300010341	Bog Forest Soil	MTQSVLERTGDQIAETARKTSRATSAVADAFEDGVEAARRVAKGSGDAAEEFVDDTTKRLQRH
Ga0074045_106498711	3300010341	Bog Forest Soil	MTQSVLEQTGEQIAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEELFDDTVKRLQRHPIETI
Ga0074045_107170683	3300010341	Bog Forest Soil	MAQSVLEETGEQIAEKARKASRAASAVADALEDGVGAARRVAKQGGDAAEELFDDTVKRLQRHP
Ga0074044_105315363	3300010343	Bog Forest Soil	MAQSVLEQTGEQIAETARKASRAASAVAYALEDGVGAARRVAYPGGDAAEEFWD
Ga0136449_1025550861	3300010379	Peatlands Soil	MSQSVLDRTGEQIAETARKASHAASAVADALEDGVGAARRVAKQGGDAAEELLDDTKKRL
Ga0181539_11094853	3300014151	Bog	MTQSVLEQMGVQIDETARKASRAASAVADVLEDGGGAARRVTKQGSRAATELIDDSRRRVQRHPLKTVA
Ga0181526_100262671	3300014200	Bog	MAQSVLERTGEQIAETARKASLAASAVADALEDGVGAARRVAKQGGDAAEELL
Ga0182013_105704452	3300014492	Bog	MTASVLEQLSEQVDETAHRASRAASAVADVLEDGVCAARRAAKQGSQAASELYVDGKRRVQR
Ga0182015_102256611	3300014495	Palsa	MAESAFEQISEQIDETAQKISRAASAVADAFEDGVITARRMAKRGEDAAEEL
Ga0182011_104365161	3300014496	Fen	MAQSVLEQVGVQIDETARKASRAASVLADALEDGGEAARRVTKQGSHAAAELLAETKKRVQR
Ga0182019_103320283	3300014498	Fen	MAQSVLEQMGVQIDETAHKASRAASVLADAIEDGGEAARRVTKQGSHAAAELLAETKERV
Ga0182019_114393242	3300014498	Fen	MSQSVLEQVGEQIDKTAHEASRAASYVADTLEDGVKAGRRAAKHGGHVAAELLDDTKRRVQRH
Ga0182024_102162542	3300014501	Permafrost	MAQSVFEQMGVQIDETARKASRAASAVADALEEGGETARRVTKEGSHAAAELLADTKK*
Ga0182021_136013143	3300014502	Fen	MSQSVLEQMGEQIDQTARKASWAASAVADALEDGVGAVRCAAKHGSQAASELYVDSRR
Ga0181522_110735002	3300014657	Bog	MTQSVLEHAGEQFSEAARSTSRAASAVADAFEDGVGAAKRVAQHSSDAATEL
Ga0182030_105690063	3300014838	Bog	MAQSVLEQVGVQIDETARKASRAASVLADALEDGGEAARRVTKQGSHAAAELLAETKKRVQRHPIETVA
Ga0182027_112298071	3300014839	Fen	MAHSVMEQMGEQINETGRKASRAASAVADAFEDGVGAVRCAAKQGSQAA
Ga0187848_100526254	3300017935	Peatland	MSQSVLEQVGEQIDKTAHEASRAASAVTNALEDGVKAARRAAKHGGYVATELLDDTKRR
Ga0187848_103410941	3300017935	Peatland	MTQSVLEQVGVQIDETAHKASRAATAVAEALEDGGDAARRITKRGSHAATELIDD
Ga0187848_103596543	3300017935	Peatland	MTQSVLEQMGVQIDETARKASRAASAVADVLEDGGGAARRVTKQGSRAATELIDDSRRRVQR
Ga0187868_12513292	3300018002	Peatland	MAQSVLEQVGVQIDETARKASRAAYVLADALEDGGGAARRVTKQGSHAAAELLAETRK
Ga0187884_100338864	3300018009	Peatland	MAQSVLEQVGVQIDETARKASRAASVLADALEDGGGAARRVTKQGSHAAAELLAETRKRVQRHPIETV
Ga0187886_12918631	3300018018	Peatland	MTQSVLEKTGDQIAETARKTSRAASAVADAFQDGVEAARRVAKQSGDAAEELFDDTAKRLQRH
Ga0187864_101206941	3300018022	Peatland	MTQSVLEQMGVQIDETARKASRAASAVADVLEDGGGAARRVTKQGSRAATELIDDSRRRVQRHPLKT
Ga0187881_101664283	3300018024	Peatland	MIQSVLERTGDQVAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEEFIDDTTRRLQRHPV
Ga0187885_101938411	3300018025	Peatland	MTQSVLEKTGDQIAETARKTSRAASAVADAFQDGVEAARRVAKQSGDAAEELFDDTAKRLQRHPMETIATT
Ga0187875_105543861	3300018035	Peatland	MSQSVLEQLGEQFDVTARKASRTASAVADALEDGVEAARRAAKQGSHAATELYV
Ga0187862_105199311	3300018040	Peatland	MTQSVLEQMGVQIDETAHKASRAASAVADALEDGGGAARRITKQGSHAATELIDDARRR
Ga0187851_101458244	3300018046	Peatland	MAQSVLEQVGVQIDETARKASRAASAVADALEDGGGAARHITKQGSHAAAELLA
Ga0210383_116186161	3300021407	Soil	MQSVLERTGEQVAETARKASRAASAVADALEDSVGAARRVAKQGGDAAEEFIDDTTKRL
Ga0224534_10654172	3300022524	Soil	MAQSVLEQVGVQIDETARKASRAASVLADALEDGGGAARRVTKQGSHAAAELLAETKKRVQRHPIE
Ga0224528_10239581	3300022861	Soil	MAQSVLEQMGVQIDETARRASRAASAVADALEDGGETARRVTKQGSHAAAELFADTKKRVQRHPI
Ga0224526_10023701	3300022872	Soil	MSQSVMEQLGEQIDETKHKASRAASAVADALEDGVGAVRCAAKQGSHAASELYVDTRRHV
Ga0224557_12032863	3300023101	Soil	MTQSVLEKVGVEIDEAACKASRAATAVADALEDGGGAVRRVTKQGSNAAEELLHDTRKRVQQH
Ga0224556_11115721	3300024295	Soil	MTQSVFEQMGVQIDETARKASRAASAVADALEEGGETARRVTKEGSHAAAELLADTRKRV
Ga0208189_10716212	3300025444	Peatland	MAQSVLEQVGVQIDETARKASRAASVLADALEDGGGAARRVTKQGSHAAAELL
Ga0208076_10302621	3300025464	Arctic Peat Soil	MTQSVLERTGEQIAETARKASRATSAVADAFEDGVEAAKRAAKQGGDAAEEFMDDT
Ga0208584_11512661	3300025533	Arctic Peat Soil	MAQSVLEHLGVQIDETARKASRAASAVADALEDGGVAARRVAKQGNDAAAELLADTRKRVHRHPIE
Ga0209638_12291102	3300025725	Arctic Peat Soil	MAQSVLEQVGVQIDETAHKASRAASVLADALEDGGGAARRVTKQGSHAAAELLA
Ga0209584_100803421	3300025878	Arctic Peat Soil	MAQSVLDRTGEQIAETARKASQAASAVADAFEDGVGAARRVAKQGGDTAEELFDDTLKR
Ga0255350_11131802	3300026502	Soil	MAQSVLEQMGVQIDETARKASRAASAVADALEDGGEAARRVAKHGSHAAAELLD
Ga0255350_11283523	3300026502	Soil	MAHSVMEQMGEQIDETACKASKAASAVADAFEDGVGAARCAVKHGSQAATELYVDTRR
Ga0209656_100342124	3300027812	Bog Forest Soil	MTQSVLEQTGEQIAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEELF
Ga0209656_104731923	3300027812	Bog Forest Soil	MAQTVLERTGEQIAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEELFDD
Ga0209040_104794211	3300027824	Bog Forest Soil	MAQSVLERTGEQIAETARKASLAASAVADALEDGVGAARRVAKQGGDAAEELLDDTTKRLQRHPIE
Ga0209048_103186841	3300027902	Freshwater Lake Sediment	MTQSVLERTGEQIAETARKASRATSAVADAFEDGVDAARRAAKQGGDA
Ga0255349_11058921	3300028090	Soil	MTQSVLGKVGEQIDETARQASRAASAVADAFEDGVVAARRAAKHSGDVATEFLDDTRRRVKR
Ga0302144_101643381	3300028560	Bog	MTQSVLEQMGKQIDETAHKASRAASAVGDALEDGVSSARRAAKRGSYAATELLDYTKKHLQR
Ga0302233_102780492	3300028746	Palsa	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAELLADTKKR
Ga0302156_102295463	3300028748	Bog	MTQSVLEQMGKQIDETAHKASRAASAVGDALEDGVSSARRAAKRGSYAATELLDDTKKHLQRH
Ga0302269_12373591	3300028766	Bog	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGGHAAAELLADTKKRV
Ga0302303_102944381	3300028776	Palsa	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAELLADTKK
Ga0302201_100470784	3300028785	Bog	MAQSVLEQLGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAELLADTKKRVQRHPIEAIAAAFT
Ga0302201_102288591	3300028785	Bog	MSQSVMEQLGEQIDETKHKASRAASAVADALEDGVGAVRCAAKQGSHAASELYVD
Ga0302201_103314912	3300028785	Bog	MAQSVLEHLGVQIDETARKASRAASAVADALEDGGGAARLVTKQGSHAAAELLAETKKRVQRHPIETV
Ga0302201_104052451	3300028785	Bog	MAQSVLKQMGEQFDETAHKASRAASAVADALEDGVGAARRVAKHGGKAAAELFDDTKRRVQRHPVETVVA
Ga0302146_100372611	3300028867	Bog	MAQSVLEQLGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAELLADTKKRVQRHPIEAIAAAFTAGIV
Ga0302155_100914401	3300028874	Bog	MTQSVLERTGDQVAEAARKASRAASAVGDALEDGVGVARRVAKQGGDAAEEFIDDTTKRLQRHPIETVV
Ga0302155_102249843	3300028874	Bog	MAPSVLVQMGGQIDETARKASRAASAVADALEDGVGAARRTAKHGAHVATEFLDDMRKRVRKHPVETVVAT
Ga0302200_104402152	3300028909	Bog	MAQSVLEQMGVQIDETARKASRAASAVADVLEDGGEAARRVAKHGSHAAAELLDDTRKRVQK
Ga0247275_11726091	3300029817	Soil	MAQSVSERTGEQIAETARKASRATSAVADAIEDGVGAARRVAKQGGDAAEELFDDTLKRLQRHPIET
Ga0311327_108938512	3300029883	Bog	MAQSVLEQMGVQIDETARKASRAASAVADVLEDGGEAARRVAKHGSHAAAELL
Ga0311329_109405032	3300029907	Bog	MTQSVLERTGDQVAEAARKASRAASAVGDALEDGVGVARRVAKQGGDAAEEFIDDTTKRL
Ga0311369_105642571	3300029910	Palsa	MAQSVFEQMGVQIDETARKASQAASAVADALEEGGDTARRVTKEGSHAAAE
Ga0311359_105376061	3300029914	Bog	MAQSVFEQMGVQIDETARKASRAASAVADALEEGGETARRVTKEGSHAAAELLADTTK
Ga0311359_107988881	3300029914	Bog	MAQSVLEQLGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAELLADTKKRVQRHPI
Ga0311358_106438802	3300029915	Bog	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGGHAAAELLADTKKRVQRHPIEAIAAAFT
Ga0302148_10186341	3300029916	Bog	MAQSVLEQLGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAELLADTKKRVQR
Ga0311363_105143493	3300029922	Fen	MAQSVLEHVGVQIDATAHKASRAAYVLADALEDGGGAARRVTKQGSHAAAELLAETKKRV
Ga0311352_101884134	3300029944	Palsa	MAQAVLEQMGEQINETARKASRAASAVADAIEDGVGAARRSAEHGVYVATELLDDTKKRVRR
Ga0311343_100782621	3300029953	Bog	MTQSVLERTGDQVAEAARKASRAASAVGDALEDGVGVARRVAKQGGDAAEEFIDDTTKRLQRHPIETVVT
Ga0311343_105729203	3300029953	Bog	MAQSVFEQMGVQIDETARKASQAASAVADALEEGGDTARRVTKECSHAAAELLADTKKRVQRHP
Ga0302280_12199853	3300029985	Fen	MAHSVMEQMGEQIDETACKASKAASAVADAFEDGVGAARCAVKHGSQAATELYVDT
Ga0302280_12539171	3300029985	Fen	MSQSVLEQVNEQIDETTRKASRAASAVADAFEDGIGTARRVAKQGGRVAT
Ga0302280_13247371	3300029985	Fen	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGGHAAAELLADTKKRVQRHPIEAIAAAFTAG
Ga0302276_104672072	3300029992	Bog	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGGHAAAELLADTKKRVQRHPIEAIAAA
Ga0302302_13509332	3300029997	Palsa	MAQAVLEQIGEQINETARKASRAASAVADAIEDGVGAARRSAEHGVYVATELLDDTKKHVRRHPI
Ga0302186_101660872	3300030004	Bog	MAQSVLEQVGVQIDETAHKASRAASVLAEALEDGGGAARRVAKQGSHAAAELLAETRKRVQQHPI
Ga0302270_103125461	3300030011	Bog	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAELLADTKKRVQRHPI
Ga0311348_102235442	3300030019	Fen	MTQSVLERTGEHIAETARKASRATSAVADAIEDGLDAARRAAKQGGDAAEELFDDTTKRLQRHPA
Ga0302281_103885212	3300030044	Fen	MTQSVLGKVGEQIDETARQASRAASAVADAFEDGVVAARRAAKHSGDVATE
Ga0302191_100389591	3300030049	Bog	MAQSVLEQLGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAELLADTK
Ga0302191_103674872	3300030049	Bog	MAPSVLVQMGGQIDETARKASRAASAVADALEDGVGAARRTAKHGAHVATEFLDDMRKRVRKHPVETVVATFAA
Ga0311353_104099723	3300030399	Palsa	MAPSVLVQMGEQIDETARKASRAASAVADAFEDGVGAARRTAKHGAHVATEFLDDTKKRVRRHPIETVVATF
Ga0311353_109696893	3300030399	Palsa	MAQSVLKQMGEQIDETARKASRATSAVADALEDGVGAARRTAKHGTYVAAEFLDDAKKRV
Ga0302192_101577191	3300030507	Bog	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGGNAAAEL
Ga0302185_100436451	3300030508	Bog	MAQSVLEQMGEQFDETTHKAARTASAVADAFEDGVGAARRAARQGGQAA
Ga0302185_100642904	3300030508	Bog	MAQSVLEQVGVQIDETAHKASRAASVLADALEDGGGAARRLTKQGSHAAAELLAETKKR
Ga0302185_102628722	3300030508	Bog	MGKQIDETAHKASRAASAVGDALEDGVSSARRAAKRGSYAATELLDDTKKHLQRHPIETVAATF
Ga0302193_100753014	3300030519	Bog	MTQSVLEQMGKQIDETAHKASRAASAVGDALEDGVSSARRAAKRGSYAATELLDDTKKH
Ga0311345_107357441	3300030688	Bog	MTQTVLEQMGVQIDETAQSASRAATAVADALEDGGGAARRVTKQGSDAAT
Ga0311345_111922262	3300030688	Bog	MAQSVLEQMGVQIDETARKASRAASAVADAFEDGGEAARRVTKQGSHAAAELLADTKKRVQRHPVETIAAA
Ga0265762_10913032	3300030760	Soil	MTQSVLEKTGDQIAETARKTSRAAAAVADAFQDGVEAARRVAKQSGDAAEEFFDDT
Ga0265756_1092811	3300030805	Soil	MAQSVLKQMGEQIDETARKASRAASAVADAFEDGVGAARRTAEHGATVATEFLDDTKKRVRRHPI
Ga0265756_1153131	3300030805	Soil	MSQSVLEQMGEQFDETARKTSRAASAVADALEDGVEAARRAAKQGSHAATKLFVDSRRRVQRYP
Ga0302180_101619543	3300031028	Palsa	MAQSVLEQMGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAA
Ga0265755_1051721	3300031041	Soil	MAQSVLEQMGEQIDETARKASWAAYIVADALEDGVGAAQRTAKHGAHVASKFLDDTKKRVRRHPIETARKASR
Ga0302325_106992233	3300031234	Palsa	MAQSVFEQMGVQIDETARKASRAASAVADALEEGGETARRVTKEGSLAAAELLADTKKRVRRHPIEAIAAAFTAG
Ga0265332_102026893	3300031238	Rhizosphere	MTRSVLDRTGEQIAETARKASRAASAIGDAFEDGVGVAQRAAKQGGDAAEEFLDDTTKRLQRHPVET
Ga0265328_104058681	3300031239	Rhizosphere	MAQSVLEQIGVQVDETARKASRAASAVADALEDGGGAARRVTKQGSHAAAELLAETKKRIQRHPIETVAAVFA
Ga0302140_101613301	3300031261	Bog	MAQSVLEQLGVQIDESARKASRAASAVADALEDGGETARRVTKQGSHAAAEL
Ga0265316_102385473	3300031344	Rhizosphere	MAQSVLERTGEQIADTARKTSRAASAVADAFEDSVIAAKRAAKQGGDAA
Ga0310686_1194266242	3300031708	Soil	MAQSVLEHTTEYIADSARKASRATSAIADVIEDGVGVARRVAKQGGDAAEEFL
Ga0302319_104350874	3300031788	Bog	MMQSVLERTGDQVAETARKASRAASAVADALEDGVGAARRVAKQGGDAAEEFLDD
Ga0302319_107187452	3300031788	Bog	MAQSVFEQMGAQIDETARKASRAASAVANALEEGGDTARRVTKEGSHAAAELLADTTK
Ga0326728_100930564	3300033402	Peat Soil	MKQSMFEQTGEQIADTAYKASRAASAVADALEDGVGAARRAAKQGFYAGAELLDDTR
Ga0316215_10094172	3300033544	Roots	MARSVLKQMGEQIDETARKASRAASAVADALEDGVGAARRTAKYGAYVATEFR
Ga0370514_146921_1_162	3300034199	Untreated Peat Soil	MAQSVFEQMGVQIDETARKASRAASAVADALEEGGDTARRVTKEGSHAAAELLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072966

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences