Metagenome / Metatranscriptome Family F073034

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073034
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	67 residues
Representative Sequence	MPENEQHEVVTRPSDSAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR
Number of Associated Samples	69
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.17 %
% of genes near scaffold ends (potentially truncated)	18.33 %
% of genes from short scaffolds (< 2000 bps)	89.17 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere (21.667 % of family members)
Environment Ontology (ENVO)	Unclassified (35.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.17% β-sheet: 0.00% Coil/Unstructured: 63.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01955	CbiZ	8.33
PF07685	GATase_3	5.00
PF02811	PHP	1.67
PF00395	SLH	1.67
PF01522	Polysacc_deac_1	0.83
PF11175	DUF2961	0.83
PF00202	Aminotran_3	0.83
PF13378	MR_MLE_C	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1865	Adenosylcobinamide amidohydrolase	Coenzyme transport and metabolism [H]	8.33
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.83 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	55.83 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	55.00 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	55.00 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	55.00 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	55.00 %
Unclassified	root	N/A	33.33 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000750\|JGI12272J11983_1017313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	783	Open in IMG/M
3300000750\|JGI12272J11983_1166182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	815	Open in IMG/M
3300000750\|JGI12272J11983_1398582	Not Available	503	Open in IMG/M
3300000827\|JGI12396J12026_1012947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	555	Open in IMG/M
3300000829\|JGI12397J12024_1025348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	600	Open in IMG/M
3300000829\|JGI12397J12024_1053736	Not Available	574	Open in IMG/M
3300003579\|Ga0007429J51699_1106925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	502	Open in IMG/M
3300004799\|Ga0058863_10018597	Not Available	581	Open in IMG/M
3300004799\|Ga0058863_11746661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	685	Open in IMG/M
3300004799\|Ga0058863_11765917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	760	Open in IMG/M
3300004800\|Ga0058861_12070556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	688	Open in IMG/M
3300004801\|Ga0058860_11902818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	592	Open in IMG/M
3300004803\|Ga0058862_12123238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	537	Open in IMG/M
3300004803\|Ga0058862_12892285	Not Available	585	Open in IMG/M
3300005093\|Ga0062594_102973045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	529	Open in IMG/M
3300005505\|Ga0068898_10064576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	680	Open in IMG/M
3300005506\|Ga0068912_10046202	Not Available	574	Open in IMG/M
3300005506\|Ga0068912_10959940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	735	Open in IMG/M
3300005506\|Ga0068912_11140723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	638	Open in IMG/M
3300008886\|Ga0115930_1096007	Not Available	590	Open in IMG/M
3300009840\|Ga0126313_11188042	Not Available	628	Open in IMG/M
3300010083\|Ga0127478_1065642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	522	Open in IMG/M
3300010100\|Ga0127440_1125880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	778	Open in IMG/M
3300010112\|Ga0127458_1108954	Not Available	678	Open in IMG/M
3300010130\|Ga0127493_1102499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	540	Open in IMG/M
3300010133\|Ga0127459_1031925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	535	Open in IMG/M
3300010145\|Ga0126321_1232309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	577	Open in IMG/M
3300010152\|Ga0126318_10725004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	751	Open in IMG/M
3300010152\|Ga0126318_10857520	Not Available	1214	Open in IMG/M
3300010154\|Ga0127503_10588778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	638	Open in IMG/M
3300010396\|Ga0134126_12261858	Not Available	593	Open in IMG/M
3300010878\|Ga0136899_10160657	Not Available	785	Open in IMG/M
3300011332\|Ga0126317_10364122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	516	Open in IMG/M
3300011333\|Ga0127502_10048856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	606	Open in IMG/M
3300011333\|Ga0127502_10355920	Not Available	558	Open in IMG/M
3300012212\|Ga0150985_102115282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	553	Open in IMG/M
3300012212\|Ga0150985_105859089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	672	Open in IMG/M
3300012212\|Ga0150985_107816280	Not Available	855	Open in IMG/M
3300012212\|Ga0150985_111413178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	654	Open in IMG/M
3300012212\|Ga0150985_112222951	Not Available	690	Open in IMG/M
3300012212\|Ga0150985_113449713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	599	Open in IMG/M
3300012212\|Ga0150985_117369947	Not Available	763	Open in IMG/M
3300012372\|Ga0134037_1157435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	588	Open in IMG/M
3300012390\|Ga0134054_1205118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	580	Open in IMG/M
3300012393\|Ga0134052_1046540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	709	Open in IMG/M
3300012401\|Ga0134055_1131039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	593	Open in IMG/M
3300012404\|Ga0134024_1098762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	548	Open in IMG/M
3300012469\|Ga0150984_105901880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	974	Open in IMG/M
3300012682\|Ga0136611_10073179	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300012682\|Ga0136611_10074329	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300012682\|Ga0136611_10085759	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300012951\|Ga0164300_10955156	Not Available	547	Open in IMG/M
3300019254\|Ga0184641_1305382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	573	Open in IMG/M
3300019269\|Ga0184644_1624735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	886	Open in IMG/M
3300019269\|Ga0184644_1819032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	553	Open in IMG/M
3300020069\|Ga0197907_10120912	Not Available	877	Open in IMG/M
3300020069\|Ga0197907_10296559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	964	Open in IMG/M
3300020069\|Ga0197907_10363195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	692	Open in IMG/M
3300020069\|Ga0197907_10522163	Not Available	607	Open in IMG/M
3300020069\|Ga0197907_10789974	Not Available	541	Open in IMG/M
3300020069\|Ga0197907_10822590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1167	Open in IMG/M
3300020069\|Ga0197907_10841455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	714	Open in IMG/M
3300020070\|Ga0206356_10408711	Not Available	594	Open in IMG/M
3300020070\|Ga0206356_10532986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	586	Open in IMG/M
3300020070\|Ga0206356_11171822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	993	Open in IMG/M
3300020070\|Ga0206356_11611963	Not Available	661	Open in IMG/M
3300020070\|Ga0206356_11657398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	506	Open in IMG/M
3300020075\|Ga0206349_1142367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	966	Open in IMG/M
3300020075\|Ga0206349_1593536	Not Available	609	Open in IMG/M
3300020075\|Ga0206349_1791266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	720	Open in IMG/M
3300020077\|Ga0206351_10183642	Not Available	529	Open in IMG/M
3300020077\|Ga0206351_10761865	Not Available	632	Open in IMG/M
3300020078\|Ga0206352_10180817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	946	Open in IMG/M
3300020078\|Ga0206352_10327262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	572	Open in IMG/M
3300020078\|Ga0206352_10868829	Not Available	865	Open in IMG/M
3300020078\|Ga0206352_11133033	Not Available	584	Open in IMG/M
3300020080\|Ga0206350_10245023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	588	Open in IMG/M
3300020080\|Ga0206350_11022339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	917	Open in IMG/M
3300020082\|Ga0206353_10312261	Not Available	587	Open in IMG/M
3300020082\|Ga0206353_10572241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	549	Open in IMG/M
3300022195\|Ga0222625_1407549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	574	Open in IMG/M
3300022467\|Ga0224712_10326653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	721	Open in IMG/M
3300027870\|Ga0209023_10291909	Not Available	1038	Open in IMG/M
3300029649\|Ga0206085_111438	Not Available	550	Open in IMG/M
3300030517\|Ga0272420_1000339	All Organisms → cellular organisms → Bacteria	70672	Open in IMG/M
3300030523\|Ga0272436_1014601	All Organisms → cellular organisms → Bacteria	6513	Open in IMG/M
3300030784\|Ga0102758_10047700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	594	Open in IMG/M
3300030784\|Ga0102758_10635450	Not Available	537	Open in IMG/M
3300030785\|Ga0102757_11017299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	660	Open in IMG/M
3300030829\|Ga0308203_1075068	Not Available	549	Open in IMG/M
3300030829\|Ga0308203_1094103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	507	Open in IMG/M
3300030858\|Ga0102759_1900990	Not Available	582	Open in IMG/M
3300030903\|Ga0308206_1115070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	617	Open in IMG/M
3300030903\|Ga0308206_1142862	Not Available	571	Open in IMG/M
3300030903\|Ga0308206_1146797	Not Available	565	Open in IMG/M
3300030903\|Ga0308206_1176842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	529	Open in IMG/M
3300030903\|Ga0308206_1202416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	504	Open in IMG/M
3300030988\|Ga0308183_1085730	Not Available	695	Open in IMG/M
3300031058\|Ga0308189_10121621	Not Available	858	Open in IMG/M
3300031091\|Ga0308201_10050859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1038	Open in IMG/M
3300031091\|Ga0308201_10152575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	725	Open in IMG/M
3300031091\|Ga0308201_10175418	Not Available	691	Open in IMG/M
3300031091\|Ga0308201_10355176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	539	Open in IMG/M
3300031092\|Ga0308204_10073376	Not Available	888	Open in IMG/M
3300031093\|Ga0308197_10348061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	563	Open in IMG/M
3300031093\|Ga0308197_10433523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	523	Open in IMG/M
3300031099\|Ga0308181_1182112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	508	Open in IMG/M
3300031421\|Ga0308194_10301713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	555	Open in IMG/M
3300031447\|Ga0272435_1031940	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300031449\|Ga0272429_1037863	All Organisms → cellular organisms → Bacteria	4122	Open in IMG/M
3300031450\|Ga0272433_10009690	All Organisms → cellular organisms → Bacteria	10730	Open in IMG/M
3300031450\|Ga0272433_10084746	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300031454\|Ga0272427_1002076	All Organisms → cellular organisms → Bacteria	37513	Open in IMG/M
3300031454\|Ga0272427_1003822	All Organisms → cellular organisms → Bacteria	21924	Open in IMG/M
3300031473\|Ga0272434_1027229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5082	Open in IMG/M
3300031473\|Ga0272434_1181932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1165	Open in IMG/M
3300032162\|Ga0272424_1052153	All Organisms → cellular organisms → Bacteria	3162	Open in IMG/M
3300032162\|Ga0272424_1083758	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300034268\|Ga0372943_1229534	Not Available	501	Open in IMG/M
3300034664\|Ga0314786_156636	Not Available	537	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.83%
Host-Associated	Host-Associated	14.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.33%
Aquatic	Environmental → Aquatic	12.50%
Plants	Host-Associated → Plants	7.50%
Human	Host-Associated → Human	5.83%
Microbial	Host-Associated → Microbial	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.33%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	10.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Digestive System	Host-Associated → Human → Digestive System	5.83%
Bacteria	Host-Associated → Microbial → Bacteria	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	10.00%
Sand	Environmental → Terrestrial → Soil → Sand	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	5.83%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	5.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.33%
Ice	Environmental → Aquatic → Freshwater → Ice	2.50%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.83%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.50%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	10.00%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	5.83%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	21.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.83%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	10.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	8.33%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	5.83%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.33%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.50%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Micrasterias Crux-Melitensis (Mzch 98) Associated	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Micrasterias Crux-Melitensis (Mzch 98) Associated	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000827	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate B) 0B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000829	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate A) 0A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005505	Soil microbial communities from Colorado Plateau and Sonoran desert - Soil Crust after wet up 5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005506	Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300008886	Microbial communities associated with unicellular green alga Micrasterias crux-melitensis, Germany - (MZCH: 98)	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010083	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010878	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 7)	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300029649	Metatranscriptome of soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030517	Rock endolithic microbial communities from Victoria Land, Antarctica - Battleship Promontory nord	Environmental	Open in IMG/M
3300030523	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak white sandstone	Environmental	Open in IMG/M
3300030784	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 6A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030858	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031447	Rock endolithic microbial communities from Victoria Land, Antarctica - Ricker Hills nord	Environmental	Open in IMG/M
3300031449	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt sud	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300031454	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sud	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300032162	Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte nord	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12272J11983_10173133	3300000750	Soil	MADNEQRDIATRMTDSEALTQQIDEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDNPQGQ*
JGI12272J11983_11661822	3300000750	Soil	MPDNEQRDIATQQSEREALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQN*
JGI12272J11983_13985821	3300000750	Soil	MADKEQRDIATQANEQESLRQQIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDY
JGI12396J12026_10129471	3300000827	Soil	MAENEQRDIATRTNGSEALTQQIDEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQGR*
JGI12397J12024_10253481	3300000829	Soil	MADNEQRDIATRMTDSEALTQQIDEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDNPQGR*
JGI12397J12024_10537361	3300000829	Soil	TSRGPLTQRSVEMSEKEQHDVVTRAAESPMHKETVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGMLSDDPHGSR*
Ga0007429J51699_11069251	3300003579	Avena Fatua Rhizosphere	NEQHEVVTRPSDSAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR*
Ga0058863_100185972	3300004799	Host-Associated	MPNMNKPENEQHDVVTHSAARRARETLFEVTPEQQEWFRLAGFSRMEWQRLIYVRWRYQQGDLTEYPQG*
Ga0058863_117466612	3300004799	Host-Associated	MADNEQRDIATRQTAREALAHSTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLMTDTPQN*
Ga0058863_117659172	3300004799	Host-Associated	MADNEQRDIATQQTEREALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYSQGLLNEYPQGR*
Ga0058861_120705562	3300004800	Host-Associated	MADNEQRDIATQQTELEALTQDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS*
Ga0058860_119028182	3300004801	Host-Associated	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYTRWRYRQGMLTDYPQAS*
Ga0058862_121232382	3300004803	Host-Associated	MAENEQHDVVTRPPASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYSQGLLNEYPQGR*
Ga0058862_128922851	3300004803	Host-Associated	MPNMNKPEHEQHDVVTHSAERQARETLFEVTPEQQEWFRLAGFSRMEWQRLIYVRWRYQQGDLTEYPQG*
Ga0062594_1029730452	3300005093	Soil	EKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYTRWRYRQGMLTDYPQAS*
Ga0068898_100645762	3300005505	Soil	MADNEQRDIATRMTDSEALTQQIDEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDNLQGQ*
Ga0068912_100462021	3300005506	Soil	MSEKEQHDVVTRAAESPMHKETVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGMLSDDPHGSR*
Ga0068912_109599402	3300005506	Soil	MADKDQRDIATQANEQEALQQQIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDYPQG*
Ga0068912_111407232	3300005506	Soil	MAEKEQHDVVTRPADRDGARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRFRQGLLNEYPQGR*
Ga0115930_10960071	3300008886	Micrasterias Crux-Melitensis (Mzch 98) Associated	MADNEQRDSATQQTEREALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS*
Ga0126313_111880421	3300009840	Serpentine Soil	MPENEQHEVVTRPSDGAAAREAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR*
Ga0127478_10656421	3300010083	Grasslands Soil	MPENEQHEVVTRPSDGAAAREAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLNEYPQGR*
Ga0127440_11258802	3300010100	Grasslands Soil	MPENEQHEVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGFLTEYPQGR*
Ga0127458_11089542	3300010112	Grasslands Soil	MPENEQHEVVTRPSDGAAAHKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGFLTEYPQGR*
Ga0127493_11024991	3300010130	Grasslands Soil	QHEVVTRPSDSAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR*
Ga0127459_10319252	3300010133	Grasslands Soil	EQHEVVTRPSDSAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR*
Ga0126321_12323091	3300010145	Soil	VSPPFALYVVEIPVRGDHQRKGACEMPENEQHDVVTRPSGGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYRQGQLTEYPQGR*
Ga0126318_107250041	3300010152	Soil	MAEKEQRDAVMRQVNDDAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQA*
Ga0126318_108575202	3300010152	Soil	MNKPENEQHDVVTRLAGRQARETLFEVTPEQQEWFRLAGFSRMEWQRLIYARWRYQQGDLTEYPQG*
Ga0127503_105887782	3300010154	Soil	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGMLTDYPQAS*
Ga0134126_122618581	3300010396	Terrestrial Soil	MNKPEHEQHDVVTHSAERQARETLFEVTPEQQEWFRLAGFSRMEWQRLIYARWRY
Ga0136899_101606571	3300010878	Soil	MVEIPARGNHQRKGAYDMPENEQHEVVTRLSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSDSPQGR*
Ga0126317_103641221	3300011332	Soil	RGDHQRKGAYEMAENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR*
Ga0127502_100488561	3300011333	Soil	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYVRWRYRQGLLTDYPQAS*
Ga0127502_103559201	3300011333	Soil	MAEKEQQDVVTRAADSPMHRQTVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGLLTDYPQAS*
Ga0150985_1021152822	3300012212	Avena Fatua Rhizosphere	HHQRKGAYEMAENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR*
Ga0150985_1058590892	3300012212	Avena Fatua Rhizosphere	MADNEQRDIATQQTELEALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS*
Ga0150985_1078162802	3300012212	Avena Fatua Rhizosphere	MAENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR*
Ga0150985_1114131782	3300012212	Avena Fatua Rhizosphere	MADNEQHDVVTRPPSGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYRQGQLTEYPQGR*
Ga0150985_1122229511	3300012212	Avena Fatua Rhizosphere	MPENEKHDVVTTSAESAAREAIDEVTPEQQEWFRMAGFSRIEWQRLVYARWRFRQGLLTEYPQGR*
Ga0150985_1134497132	3300012212	Avena Fatua Rhizosphere	MAEKEQQDVVTRAADSPLHQQTVEEITPEQQEWLRLAGFSRKDWQRLVYARWRVRQGLLNDYPQGSR*
Ga0150985_1173699471	3300012212	Avena Fatua Rhizosphere	MPENEQHEVVTRPSDSAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR*
Ga0134037_11574351	3300012372	Grasslands Soil	MPENEQHEVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGFLTEYPQGL*
Ga0134054_12051181	3300012390	Grasslands Soil	MPENEQYDVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGFLTEYPQGR*
Ga0134052_10465402	3300012393	Grasslands Soil	MPENEQHEVVTRPSDSAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGFLTEYPQGR*
Ga0134055_11310392	3300012401	Grasslands Soil	MPENEQHEVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYP*
Ga0134024_10987621	3300012404	Grasslands Soil	ENEQHEVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLNEYPQGR*
Ga0150984_1059018802	3300012469	Avena Fatua Rhizosphere	MPENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR*
Ga0136611_100731794	3300012682	Polar Desert Sand	MPDNEQRDVATQQTEREALTHDTEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS*
Ga0136611_100743294	3300012682	Polar Desert Sand	MPDNEQRDIATQQTELEALTHDINEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDIPQN*
Ga0136611_100857593	3300012682	Polar Desert Sand	MAEKEQQDVVTRAADSPLHRQTVEEVTPEQQEWLQLAGFSRKDWQRLVYARWRVRQGLLNDYPQGSR*
Ga0164300_109551561	3300012951	Soil	MADNEQRDIATQQTEREALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS*
Ga0184641_13053821	3300019254	Groundwater Sediment	HQRKGAYEMAENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR
Ga0184644_16247351	3300019269	Groundwater Sediment	MADNEQRDIATQQTEREALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS
Ga0184644_18190322	3300019269	Groundwater Sediment	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKDWQRLVYARWRYRQGMLTDYLQVS
Ga0197907_101209122	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MPENEQHEVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSDYPQSR
Ga0197907_102965592	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MADNEQRDIATQQTELEALTQDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS
Ga0197907_103631952	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKEQRDAVMRQVNDDAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQA
Ga0197907_105221631	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKEQQDVVTRAADSPLHQQTVEEITPEQQEWLRLAGFSRKDWQRLVYARWRVRQGLLNDYPQGSR
Ga0197907_107899741	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MPNMNKPENEQHDVVTHSAARRARETLFEVTPEQQEWFRLAGFSRMEWQRLIYARWRYQQGDLNEYPQG
Ga0197907_108225902	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MPNMNKPEHEQHDVVTHSAERQARETLFEVTPEQQEWFRLAGFSRMEWQRLIYVRWRYQQGDLTEYPQG
Ga0197907_108414552	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKEQRDAVMRQLNDDAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQA
Ga0206356_104087111	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MADNEQRDIATQQTELEALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS
Ga0206356_105329861	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	DHQRKGACEMPENEQHDVVTRPSDGATARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR
Ga0206356_111718222	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MPNMNKPEHEQHDVVTHSAERQARETLFEVTPEQQEWFRLAGFSRMEWQRLIYVRWRYQQGDLTEYSQG
Ga0206356_116119632	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKEQQDVVTRAADSPLHQQTVEEITPEQQEWLRLAGFNRKDWQRLIYARWRVRQGLLNDYPQGSR
Ga0206356_116573981	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	QMAEKEQRDAVMRQLNDDAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQA
Ga0206349_11423672	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MPNMNKPENEQHDVVTHSAARRARETLFEVTPEQQEWFRLAGFSRMEWQRLIYARWRYQQGDLNEYPRG
Ga0206349_15935362	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKEQQDVATRAADSPLHQQTVEEITPEQQEWLRLAGFNRKDWQRLIYARWRVRQGLLNDYPQGSR
Ga0206349_17912662	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKEQRDAVMRQLNDDAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQG
Ga0206351_101836421	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MADNEQRDSATQQTEREALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS
Ga0206351_107618651	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MPNMNKPENEQHDVVTHSAARRARETLFEVTPEQQEWFRLAGFSRMEWQRLIYARWRYQ
Ga0206352_101808172	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MADNEQRDIATQQTEREALTHDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLTDTPQS
Ga0206352_103272622	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYTRWRYRQGMLTDYPQAS
Ga0206352_108688292	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MPENEQHEVVTRPSDGAAARKAIEEVTPEHQEWFRLAGFSRIEWQRLVYARWRYRQGLLSDYPQSR
Ga0206352_111330332	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MPENEQHDVVTRPSDGATARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLTEYPQGR
Ga0206350_102450231	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	QRTLSWRYILVEDSFPERRNHRRKGAWKMAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYVRWRYRQGMLTDYPQAS
Ga0206350_110223392	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MPENEQHEVVTRPSDSAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR
Ga0206353_103122611	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MPENEQHEVVTRPSDGATARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLNEYPQGR
Ga0206353_105722412	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MPENEQHDVVTRPSDGATARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSDYPQSR
Ga0222625_14075491	3300022195	Groundwater Sediment	HQRKGACKMAENEQRDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR
Ga0224712_103266532	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MADNEQRDIATRQTAREALAHSTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLMTDTPQN
Ga0209023_102919092	3300027870	Freshwater And Sediment	MAEKEQQDVVTRAAETPLHQQTVEEITPEQQEWLRLAGFSRKDWQRLVYARWRVRQGLLNDYPQGSR
Ga0206085_1114381	3300029649	Soil	MADKEQRDIATQANEQDALRQEIDEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDYPQG
Ga0272420_100033913	3300030517	Rock	MAEKEQRDAVMCQVNDAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQA
Ga0272436_10146012	3300030523	Rock	MAEKEQRDAVMRQVNDAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQA
Ga0102758_100477001	3300030784	Soil	MPENEQHEVVTRPSDGAAARRAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLSEYPQGR
Ga0102758_106354502	3300030784	Soil	MAEKEQQDVVTRAADSTLHQQTVEEITPEQQEWLRLAGFSRKDWQRLVYARWRVRQGLLNDYPQGSR
Ga0102757_110172992	3300030785	Soil	MPENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYSQGLLNEYPQGR
Ga0308203_10750681	3300030829	Soil	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYIRWRYRQGMLTDYPQAS
Ga0308203_10941032	3300030829	Soil	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGMLTDYPQAS
Ga0102759_19009901	3300030858	Soil	MPENEQYDVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLSEYP
Ga0308206_11150701	3300030903	Soil	MADNEQRDIATQQTELEALTHYTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS
Ga0308206_11428622	3300030903	Soil	MPENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR
Ga0308206_11467971	3300030903	Soil	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKDWQRLVYARWRYRQGMLTDYPQVS
Ga0308206_11768421	3300030903	Soil	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGMLTDYSQAS
Ga0308206_12024161	3300030903	Soil	MAEKEQHDVVTRAAGSPAHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGLLTDYPQGSK
Ga0308183_10857301	3300030988	Soil	MAEKEQQDVVTLAADSPLHQQTVEEITPEQQEWLRLAGFSRKDWQRLVYARWRVRQGLLNDYPQGSR
Ga0308189_101216212	3300031058	Soil	MPENEQHEVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLSDYPQGR
Ga0308201_100508592	3300031091	Soil	MPENEQYEVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLSEYPQGR
Ga0308201_101525752	3300031091	Soil	MSEKEQRDAVMRQANDEAVRKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQS
Ga0308201_101754182	3300031091	Soil	MADNEQRDIATRQTAREALTQHIDEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQGS
Ga0308201_103551762	3300031091	Soil	MAENEQHDVVTRSSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR
Ga0308204_100733761	3300031092	Soil	MPENEQHEVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLSEYPQGR
Ga0308197_103480611	3300031093	Soil	RKGAYEMAENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPVGR
Ga0308197_104335231	3300031093	Soil	FPERRNHRRKGAWKMAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGMLTDYPQAS
Ga0308181_11821121	3300031099	Soil	HRRKGAWKMAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYARWRYRQGMLTDYPQAS
Ga0308194_103017132	3300031421	Soil	MAENEQHDVVTRPSASAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLIYARWRYSQGLLNEYPLGR
Ga0272435_10319403	3300031447	Rock	MAEKEQQRDAVMRQVNDEAVRKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLGEYPQDQA
Ga0272429_10378633	3300031449	Rock	MAEKEQRDAVMRQVNDAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQA
Ga0272433_100096906	3300031450	Rock	VAEKEQRDAMMRQVNDAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLSEYPQGQA
Ga0272433_100847463	3300031450	Rock	MAEKEQRDAVMRQVSDEAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLGEYPQG
Ga0272427_10020763	3300031454	Rock	MPDNDQRDVAARPVDVGSARQALEEVTPEQQEWFRLAGFSRIEWQRLVYARWRYRQGLLGDDWQVS
Ga0272427_10038225	3300031454	Rock	MVDNEQRDIATQQTEREALTQDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS
Ga0272434_10272296	3300031473	Rock	MADNEQRDIATQQTEREALTQDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLT
Ga0272434_11819322	3300031473	Rock	MAEKEQRDAVMRQVNDEAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLGEYPQEQA
Ga0272424_10521532	3300032162	Rock	MADNEQRDIATQQTEREALTQDTEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLTDTPQS
Ga0272424_10837581	3300032162	Rock	MAEKEQRDAVLRQVNDEAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHREGLLGEYPQGQA
Ga0372943_1229534_106_306	3300034268	Soil	MPENEQYDVVTRPSDGAAARKAIEEVTPEQQEWFRLAGFSRIEWQRLVYARWRHRQGLLSEYPQGR
Ga0314786_156636_295_495	3300034664	Soil	MAEKEQQDVVTRAADSPMHQQTVEEVTPEQQEWLRLAGFSRKEWQRLVYVRWRYRQGLLTDYPQAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073034

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences