NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F073093

Metagenome / Metatranscriptome Family F073093

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073093
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 40 residues
Representative Sequence NADAEWRYQVLEVVRGRKPAHQRERQLIAEFEPTLNTF
Number of Associated Samples 87
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.83 %
% of genes near scaffold ends (potentially truncated) 97.50 %
% of genes from short scaffolds (< 2000 bps) 94.17 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (70.833 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(74.167 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(70.833 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.15%    β-sheet: 0.00%    Coil/Unstructured: 84.85%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF10902WYL_2 1.67
PF06941NT5C 0.83
PF05050Methyltransf_21 0.83
PF03597FixS 0.83
PF00768Peptidase_S11 0.83
PF05433Rick_17kDa_Anti 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.83
COG3197Cytochrome oxidase maturation protein, CcoS/FixS familyPosttranslational modification, protein turnover, chaperones [O] 0.83
COG45025'(3')-deoxyribonucleotidaseNucleotide transport and metabolism [F] 0.83


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A70.83 %
All OrganismsrootAll Organisms29.17 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000929|NpDRAFT_10057230All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1855Open in IMG/M
3300003497|JGI25925J51416_10150879Not Available528Open in IMG/M
3300004461|Ga0066223_1246610All Organisms → cellular organisms → Bacteria → Proteobacteria916Open in IMG/M
3300005527|Ga0068876_10527940Not Available646Open in IMG/M
3300005527|Ga0068876_10642176Not Available572Open in IMG/M
3300005580|Ga0049083_10323570Not Available514Open in IMG/M
3300005581|Ga0049081_10072035Not Available1300Open in IMG/M
3300005581|Ga0049081_10128840Not Available933Open in IMG/M
3300005582|Ga0049080_10029404All Organisms → Viruses → Predicted Viral1918Open in IMG/M
3300005582|Ga0049080_10076147Not Available1149Open in IMG/M
3300005582|Ga0049080_10193003Not Available674Open in IMG/M
3300005582|Ga0049080_10254499All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage572Open in IMG/M
3300005805|Ga0079957_1255289Not Available811Open in IMG/M
3300007559|Ga0102828_1155446Not Available575Open in IMG/M
3300007559|Ga0102828_1164740Not Available559Open in IMG/M
3300007642|Ga0102876_1147201Not Available631Open in IMG/M
3300007973|Ga0105746_1362417Not Available507Open in IMG/M
3300008110|Ga0114343_1148164Not Available751Open in IMG/M
3300008953|Ga0104241_1011510Not Available605Open in IMG/M
3300009056|Ga0102860_1111203Not Available764Open in IMG/M
3300009155|Ga0114968_10474664Not Available674Open in IMG/M
3300009158|Ga0114977_10712114Not Available534Open in IMG/M
3300009159|Ga0114978_10027381Not Available4110Open in IMG/M
3300009159|Ga0114978_10658991Not Available600Open in IMG/M
3300009160|Ga0114981_10543903Not Available619Open in IMG/M
3300009161|Ga0114966_10068507Not Available2458Open in IMG/M
3300009161|Ga0114966_10597257All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage616Open in IMG/M
3300009163|Ga0114970_10428234Not Available731Open in IMG/M
3300009164|Ga0114975_10241293Not Available1013Open in IMG/M
3300009182|Ga0114959_10070584All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1968Open in IMG/M
3300009182|Ga0114959_10380096Not Available693Open in IMG/M
3300009182|Ga0114959_10517908Not Available574Open in IMG/M
3300009185|Ga0114971_10729830Not Available540Open in IMG/M
3300009426|Ga0115547_1140094Not Available778Open in IMG/M
3300010157|Ga0114964_10460736Not Available599Open in IMG/M
3300010160|Ga0114967_10474361Not Available614Open in IMG/M
3300011010|Ga0139557_1038123Not Available836Open in IMG/M
3300011011|Ga0139556_1015028All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1112Open in IMG/M
3300012665|Ga0157210_1059595All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage579Open in IMG/M
3300013004|Ga0164293_10963479Not Available534Open in IMG/M
3300013005|Ga0164292_10560565All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage742Open in IMG/M
3300013005|Ga0164292_10948649Not Available538Open in IMG/M
3300014819|Ga0119954_1013504All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1774Open in IMG/M
3300014962|Ga0134315_1032930All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes802Open in IMG/M
3300017701|Ga0181364_1065501Not Available559Open in IMG/M
3300017722|Ga0181347_1040576Not Available1427Open in IMG/M
3300017722|Ga0181347_1050816All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1252Open in IMG/M
3300017722|Ga0181347_1084077Not Available924Open in IMG/M
3300017722|Ga0181347_1120620Not Available733Open in IMG/M
3300017736|Ga0181365_1039164Not Available1192Open in IMG/M
3300017747|Ga0181352_1203988Not Available508Open in IMG/M
3300017774|Ga0181358_1154195Not Available782Open in IMG/M
3300017774|Ga0181358_1178379Not Available708Open in IMG/M
3300017777|Ga0181357_1147491Not Available869Open in IMG/M
3300017784|Ga0181348_1105754All Organisms → cellular organisms → Bacteria → Proteobacteria1095Open in IMG/M
3300017784|Ga0181348_1258592Not Available599Open in IMG/M
3300020151|Ga0211736_10890123Not Available781Open in IMG/M
3300020161|Ga0211726_10071627Not Available567Open in IMG/M
3300020205|Ga0211731_10649482Not Available953Open in IMG/M
3300020205|Ga0211731_10929374All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage687Open in IMG/M
3300020222|Ga0194125_10654075Not Available619Open in IMG/M
3300020506|Ga0208091_1028919Not Available624Open in IMG/M
3300020527|Ga0208232_1021232Not Available926Open in IMG/M
3300020549|Ga0207942_1043031Not Available559Open in IMG/M
3300020571|Ga0208723_1019533Not Available1062Open in IMG/M
3300021962|Ga0222713_10049793All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3209Open in IMG/M
3300021962|Ga0222713_10175806All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1454Open in IMG/M
3300022179|Ga0181353_1025219All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1572Open in IMG/M
3300022190|Ga0181354_1072693All Organisms → Viruses → Predicted Viral1139Open in IMG/M
3300022190|Ga0181354_1112293Not Available881Open in IMG/M
3300022190|Ga0181354_1233865Not Available531Open in IMG/M
3300023184|Ga0214919_10242212All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum1302Open in IMG/M
3300024348|Ga0244776_10753105Not Available595Open in IMG/M
3300027193|Ga0208800_1008155All Organisms → Viruses → Predicted Viral1324Open in IMG/M
3300027393|Ga0209867_1001869All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae3101Open in IMG/M
3300027503|Ga0255182_1021702All Organisms → Viruses → Predicted Viral1913Open in IMG/M
3300027541|Ga0255158_1106333Not Available610Open in IMG/M
3300027608|Ga0208974_1026115All Organisms → Viruses → Predicted Viral1787Open in IMG/M
3300027608|Ga0208974_1042706Not Available1326Open in IMG/M
3300027608|Ga0208974_1084947Not Available861Open in IMG/M
3300027608|Ga0208974_1146760Not Available601Open in IMG/M
3300027659|Ga0208975_1091604Not Available890Open in IMG/M
3300027679|Ga0209769_1275189Not Available508Open in IMG/M
3300027732|Ga0209442_1063196All Organisms → Viruses → Predicted Viral1565Open in IMG/M
3300027736|Ga0209190_1125425Not Available1146Open in IMG/M
3300027760|Ga0209598_10365430Not Available540Open in IMG/M
3300027772|Ga0209768_10121664Not Available1255Open in IMG/M
3300027772|Ga0209768_10310775All Organisms → cellular organisms → Bacteria → Proteobacteria659Open in IMG/M
3300027772|Ga0209768_10325707Not Available637Open in IMG/M
3300027782|Ga0209500_10280745Not Available713Open in IMG/M
3300027785|Ga0209246_10126545All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1003Open in IMG/M
3300027785|Ga0209246_10152683Not Available907Open in IMG/M
3300027785|Ga0209246_10188210All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage808Open in IMG/M
3300027785|Ga0209246_10384461Not Available529Open in IMG/M
3300027808|Ga0209354_10260352All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage695Open in IMG/M
3300027808|Ga0209354_10273368All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage675Open in IMG/M
3300027963|Ga0209400_1095833All Organisms → Viruses → Predicted Viral1394Open in IMG/M
3300027971|Ga0209401_1344173Not Available505Open in IMG/M
3300028124|Ga0228621_1056268Not Available579Open in IMG/M
3300029930|Ga0119944_1018648All Organisms → Viruses960Open in IMG/M
3300031786|Ga0315908_11554547Not Available514Open in IMG/M
3300031787|Ga0315900_10568141Not Available839Open in IMG/M
3300031787|Ga0315900_10973834Not Available561Open in IMG/M
3300031857|Ga0315909_10438818Not Available922Open in IMG/M
3300031963|Ga0315901_10904342Not Available628Open in IMG/M
3300031963|Ga0315901_10961899Not Available601Open in IMG/M
3300032050|Ga0315906_11132631Not Available574Open in IMG/M
3300032092|Ga0315905_10987914Not Available709Open in IMG/M
3300032116|Ga0315903_10972730Not Available597Open in IMG/M
3300032116|Ga0315903_11023415All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage576Open in IMG/M
3300034060|Ga0334983_0235749Not Available1119Open in IMG/M
3300034062|Ga0334995_0375055Not Available900Open in IMG/M
3300034064|Ga0335001_0016937All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4305Open in IMG/M
3300034066|Ga0335019_0466965Not Available760Open in IMG/M
3300034093|Ga0335012_0341250Not Available748Open in IMG/M
3300034103|Ga0335030_0488404Not Available779Open in IMG/M
3300034105|Ga0335035_0038601All Organisms → Viruses → Predicted Viral3172Open in IMG/M
3300034106|Ga0335036_0846245All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage524Open in IMG/M
3300034106|Ga0335036_0877771Not Available511Open in IMG/M
3300034117|Ga0335033_0030888Not Available3407Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake25.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake16.67%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater11.67%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic10.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater8.33%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater5.83%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine5.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.33%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.67%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.67%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton0.83%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.83%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.83%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.83%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic0.83%
Surface WaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water0.83%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater0.83%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.83%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.83%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.83%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.83%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.83%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000929Marine plume microbial communities from the Columbia River - 15 PSUEnvironmentalOpen in IMG/M
3300003497Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DNEnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007642Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3EnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008953Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT4EnvironmentalOpen in IMG/M
3300009056Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3EnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009182Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaGEnvironmentalOpen in IMG/M
3300009185Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaGEnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300010157Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaGEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300011011Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012665Freshwater microbial communities from Talbot River, Ontario, Canada - S11EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300014819Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011AEnvironmentalOpen in IMG/M
3300014962Surface water microbial communities from Bangladesh - BaraHaldiaSW0309EnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020527Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020549Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020571Freshwater microbial communities from Lake Mendota, WI - 31AUG2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300027193Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)EnvironmentalOpen in IMG/M
3300027393Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027503Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8dEnvironmentalOpen in IMG/M
3300027541Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepC_8hEnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027679Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027732Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027760Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027963Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028124Seawater microbial communities from Monterey Bay, California, United States - 25DEnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300031786Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300034060Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034064Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034105Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034117Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
NpDRAFT_1005723053300000929Freshwater And MarineLAGASWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF*
JGI25925J51416_1015087923300003497Freshwater LakeLRDNADAEWRYQVLEVVRGRKPAHQRERQLIAEYSPNLNTF*
Ga0066223_124661033300004461MarineQWSFCNALRANADAEWRYEVLEVVRGRKPAHQVERQYIADFEPTLNTF*
Ga0068876_1052794013300005527Freshwater LakeEWRYEVLDVVRGRKPAHQSERALIDLFEPTLNTF*
Ga0068876_1064217623300005527Freshwater LakeIRNNADAEWRYQVLEVVRGRKPAHQRERQLIAEYSPNLNTF*
Ga0049083_1032357013300005580Freshwater LenticSDCTWTYEVIEVVRGRKPAHQRERQLISELNPSLNTF*
Ga0049081_1007203553300005581Freshwater LenticSFCAAIRNNADAEWRYQVLEVVRGRKPAHQRERQLIAEFEPTLNTF*
Ga0049081_1012884013300005581Freshwater LenticRNLAGASWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF*
Ga0049080_1002940473300005582Freshwater LenticYSFLRENPEVQLQYEVLEVVRGRKPAYQRERELIAEYEPNLNTF*
Ga0049080_1007614713300005582Freshwater LenticLRNLAGASWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF*
Ga0049080_1019300343300005582Freshwater LenticDEAVQYEVIEVVRGRKAAHSRERELIASLSPSLNTF*
Ga0049080_1025449933300005582Freshwater LenticVQIQYEVLEVVRGRKPAYQRERELIAQYQPNLNTF*
Ga0079957_125528933300005805LakeVQLQYEVLEVVRGRKPAYQRERELIAEYEPNLNTF*
Ga0102828_115544613300007559EstuarineLYSYLRDNPEVQIQYEVLEVVRGRKPAYARERELIAQYQPNLNTF*
Ga0102828_116474013300007559EstuarineSWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF*
Ga0102876_114720133300007642EstuarineALRELSDCTWSYQVIEVVRGRKPAHQRERQLISELNPTLNTF*
Ga0105746_136241723300007973Estuary WaterAAWQYEVLEVIRGRKPAHQRERELIAEFEPSLNTF*
Ga0114343_114816413300008110Freshwater, PlanktonDCEWRYEVLDVVRGRKPAHQSERALIDLFEPTLNTF*
Ga0104241_101151013300008953FreshwaterPELPLRYEVIEVVRGRKPAYQRERELIAALVPSLNTF*
Ga0102860_111120333300009056EstuarineEVQIQYEVLEVVRGRKPAYQRERELIAQYQPNLNTF*
Ga0114968_1047466433300009155Freshwater LakeDAVWRYEVLEVVRGRKPAHQRERQLIAEFQPNLNTF*
Ga0114977_1071211413300009158Freshwater LakeWSLYAFLSNNPEVTVQYEVLEVIRGRKPAYQRERELISEYQPTLNTF*
Ga0114978_1002738113300009159Freshwater LakeNPELPLRYEVIEVVRGRKPAYQRERELIGELSPSLNTF*
Ga0114978_1065899113300009159Freshwater LakeENPEVVLRYEVLEVVRGRKAAHSRERELIAEWAPSLNTF*
Ga0114981_1054390333300009160Freshwater LakeALRNLAGASWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF*
Ga0114966_10068507103300009161Freshwater LakeDNPEVQIQYEVLEVVRGRKPAYQRERELIAQYQPNLNTF*
Ga0114966_1059725733300009161Freshwater LakeLYSYLRDNPEVQIQYEVLEVVRGRKPAYQRERELIAQYQPNLNTF*
Ga0114970_1042823433300009163Freshwater LakeFCAALRDNAECEWRYEVLEVVRGRKPAHQRERQLIAEFEPTLNTF*
Ga0114975_1024129313300009164Freshwater LakeNTDADFRYEVLEIVRGRKPAHQRERELIAEFEPTLNTF*
Ga0114959_1007058413300009182Freshwater LakeMCVAIRELAQCDWKYEVVEIVRGRKPAHQRERQLIAELAPSLNTF*
Ga0114959_1038009613300009182Freshwater LakeMSDCTWTYDVIEVVSGRKPAHQRERQLISELNPTLNTF*
Ga0114959_1051790813300009182Freshwater LakeAEWRYQVLEVVRGRKPAHQRERQLIAEYSPNLNTF*
Ga0114971_1072983033300009185Freshwater LakeLRSNTDADFRYEVLEVVRGRKPAHQRERQLIAEYEPTLNTF*
Ga0115547_114009413300009426Pelagic MarineTIYYEILEVIRGRKNAYQRERELIRELEPSLNDF*
Ga0114964_1046073633300010157Freshwater LakeADFRYEVLEIVRGRKPAHQRERELIAEFEPTLNTF*
Ga0114967_1047436123300010160Freshwater LakeMSDAEYQYEVLEVVRGRKPAHQRERQLISELAPTLNTF*
Ga0139557_103812333300011010FreshwaterEWRYQVLEVVRGRKPAHQRERQLIAEFEPTLNTF*
Ga0139556_101502853300011011FreshwaterDWRYQVLEVVRGRKNAHQRERELIRDLNPTLNTF*
Ga0157210_105959523300012665FreshwaterLSYLSVTSWQYEVLEVIRGRKPAHQRERELIAEFEPSLNTF*
Ga0164293_1096347933300013004FreshwaterAEWRYEVLEVIRGRKPAHQREREFIAEFQPTLNTF*
Ga0164292_1056056533300013005FreshwaterIEAEYRYEVLEVIRGRKPAHQRERELIVELEPSLNTF*
Ga0164292_1094864913300013005FreshwaterPEVQIQYEVLEVVRGRKPAYQRERELIAEYEPNLNTF*
Ga0119954_101350473300014819FreshwaterALRVLDDCTWTYQVLEVVRGRKNAHQRERELIRDYEPSLNTF*
Ga0134315_103293013300014962Surface WaterDIVEYEVLEVVRGRKPAHQRERELIRELEPSLNEF*
Ga0181364_106550113300017701Freshwater LakeAGAAWQYEVLEVIRGRKPAHQRERELIAKFEPSLNTF
Ga0181347_104057673300017722Freshwater LakeNADAEWRYQVLEVVRGRKPAHQRERQLIAEYSPNLNTF
Ga0181347_105081613300017722Freshwater LakeNPEVQIQYEVLEVVRGRKPAYQRERELIAQYQPDLNTF
Ga0181347_108407743300017722Freshwater LakeRNTALRELSDCTWTYQVIEVVRGRKPAHQRERQLISELNPSLNTF
Ga0181347_112062013300017722Freshwater LakeALRDNADAEWRYQVLEVVRGRKPAHQRERQLIAEFEPTLNTF
Ga0181365_103916443300017736Freshwater LakeNALRELAGASWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0181352_120398813300017747Freshwater LakeSDEVIQYEVLEVVRGRKAAHSRERELIASLSPSLNTF
Ga0181358_115419533300017774Freshwater LakeALRELAGAAWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0181358_117837933300017774Freshwater LakeDNPEVQIQYEVLEVVRGRKPAYARERELIAQYQPDLNTF
Ga0181357_114749113300017777Freshwater LakeNLAGAAWQYEVLEVIRGRKPAHQRERELIAEYQPSLNTF
Ga0181348_110575443300017784Freshwater LakeFLRDNIEAEYRYEVLEIVRGRKPAHQRERALIAELEPSLNTF
Ga0181348_125859223300017784Freshwater LakeDAEWRYQVLEVVRGRKPAHQRERQLIAEYSPNLNTF
Ga0211736_1089012343300020151FreshwaterANPEVQIQYEVLEVVRGRKPAYQRERELIAEYQPNLNTF
Ga0211726_1007162733300020161FreshwaterWTLYSFLRENPEVQLQYEVLEVVRGRKPAYQRERELIAEYEPNLNTF
Ga0211731_1064948243300020205FreshwaterLAGAAWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0211731_1092937433300020205FreshwaterMCNALRELAGAAWQYEVLEVIRGRKPAHQRERQLIAE
Ga0194125_1065407533300020222Freshwater LakeAWAFCDFIRNNVNAEFRYEVIEIVRGRKNAYQRERQIIAEFEPSLNTF
Ga0208091_102891933300020506FreshwaterLRENPEVQLQYEVLEVVRGRKPAYQRERELIAEYEPNLNTF
Ga0208232_102123213300020527FreshwaterALRDNAECEWRYEVLEIVRGRKPAHQRERQLIAEYEPTLNTF
Ga0207942_104303133300020549FreshwaterFIRDNANASFTYEVLEIVRGRKPAHQRERELIAYLEPTLNTF
Ga0208723_101953313300020571FreshwaterLYSYLRDNPEVQIQYEVLEVVRGRKPAYQRERELIAQYQPNLNTF
Ga0222713_1004979313300021962Estuarine WaterFLRAMPDAEYRYEVLEVVRGRKPAHQRERQLISELAPTLNTF
Ga0222713_1017580613300021962Estuarine WaterTDAEYRYEVLEIVRGRKPAHQRERELISELSPTLNTF
Ga0181353_102521963300022179Freshwater LakeSAFTYGVIEFVRGRRPAHARERELIREFNPALNTR
Ga0181354_107269313300022190Freshwater LakeSDCTWTYQVIEVVRGRKPAHQRERQLISELNPSLNTF
Ga0181354_111229313300022190Freshwater LakeSNTDADFRYEVLEVVRGRKPAHQRERQLIAEYEPTLNTF
Ga0181354_123386513300022190Freshwater LakeINAEWRYEVLEVVRGRKPAHQRERQYIADFEPTLNTF
Ga0214919_1024221213300023184FreshwaterSFCNALREHVDAEWRYEVLEVVRGRKPAHQVERQYIAEFEPTLNTF
Ga0244776_1075310533300024348EstuarineCQFIRDNANASFTYEVLEIVRGRKPAHQRERELIAYLEPTLNTF
Ga0208800_100815513300027193EstuarineRELAGAAWQYEVLEVIRGRKPAHQRERELIAEFEPSLNTF
Ga0209867_100186913300027393SandTALRNLAGASWQYEVLEVIRGRKPAHQRERELIAEFEPSLNTF
Ga0255182_102170263300027503FreshwaterIRDLADCEWRYEVVEVVRGRKPAHQRERELIATYEPSLNTF
Ga0255158_110633333300027541FreshwaterNKDWSLYAFLRDNPEVQLQYEVIEVVRGRKNAYQRERELIAEYEPNLNTF
Ga0208974_102611563300027608Freshwater LenticNLAGASWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0208974_104270613300027608Freshwater LenticLRNLAGASWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0208974_108494733300027608Freshwater LenticDNADAEWRYQVLEVVRGRKPAHQRERQLIAEFEPTLNTF
Ga0208974_114676033300027608Freshwater LenticVQLQYEVLEVVRGRKPAYQRERELIAEYEPNLNTF
Ga0208975_109160433300027659Freshwater LenticAFCEALRTLADCEWRYEVLDVVRGRKPAHQSERALIDLFEPTLNTF
Ga0209769_127518923300027679Freshwater LakeRELAGAAWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0209442_106319613300027732Freshwater LakeGAAWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0209190_112542513300027736Freshwater LakeDADFRYEVLEIVRGRKPAHQRERELIAEFEPTLNTF
Ga0209598_1036543013300027760Freshwater LakeLRSNTDADFRYEVLEIVRGRKPAHQRERELIAEFEPTLNTF
Ga0209768_1012166443300027772Freshwater LakeTALRNLAGAAWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0209768_1031077513300027772Freshwater LakeEAEYRYEVLEIVRGRKPAHQRERALIAELEPSLNTF
Ga0209768_1032570723300027772Freshwater LakeNTDADFRYEVLEVVRGRKPAHQRERQLIAEYEPTLNTF
Ga0209500_1028074513300027782Freshwater LakeDNPELPLRYEVIEVVRGRKPAYQRERELIGELSPSLNTF
Ga0209246_1012654513300027785Freshwater LakeFCAALRDNAECEWRYEVLEIVRGRKPAHQRERQLIAEFEPTLNTF
Ga0209246_1015268343300027785Freshwater LakeNALRELAGAAWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0209246_1018821043300027785Freshwater LakeALRDNPDAVWRYEVLEVVRGRKPAHQRERQLIAEFQPNLNTF
Ga0209246_1038446123300027785Freshwater LakePDAVWRYEVLEVVRGRKPAHQRERQLIAEFQPNLNTF
Ga0209354_1026035233300027808Freshwater LakeLRDNPDAVWRYEVLEVVRGRKPAHQRERQLIAEFQPNLNTF
Ga0209354_1027336813300027808Freshwater LakeENPEVQLQYEVLEVVRGRKPAHQRERQYIAEYQPTLNTF
Ga0209400_109583313300027963Freshwater LakeAIRELAQCDWKYEVVEIVRGRKPAHQRERQLIAELEPSLNTF
Ga0209401_134417313300027971Freshwater LakeMCTFLRNNIEAEYRYEVIEVVRGRKAAHQRERELIGALSPSLNTF
Ga0228621_105626823300028124SeawaterLRETTETVRCEVLEVVRGRKAAYIRERELIAELSPTLNDF
Ga0119944_101864843300029930AquaticSNPTSSWTYQVLEIVRGRKNAHQRERQLIADMSPTLNTF
Ga0315908_1155454713300031786FreshwaterNFIRQNPEVELDYEVLEVVRGRKPAYQRERELISELQPSLNTF
Ga0315900_1056814113300031787FreshwaterSEVVQYEVLEVVRGRKAAHSRERELIEALSPSLNTF
Ga0315900_1097383413300031787FreshwaterADAEWRYQVLEVVRGRKPAHQRERQLIAEFEPTLNTF
Ga0315909_1043881813300031857FreshwaterGASWQYEVLEVIRGRKPAHQRERQLIAEFEPSLNTF
Ga0315901_1090434213300031963FreshwaterCEWRYEVLDVVRGRKPAHQSERALIDLFEPTLNTF
Ga0315901_1096189913300031963FreshwaterNADAEWRYQVLEVVRGRKPAHQRERQLIAEFEPTLNTF
Ga0315906_1113263133300032050FreshwaterYSFLKENPETTIQYEVIEVVRGRKPAYQRERELIAEYEPTLNTF
Ga0315905_1098791433300032092FreshwaterCTAIRDNADAEWRYEVIEVVRGRKPAHQRERQLIAEFSPTLNTF
Ga0315903_1097273013300032116FreshwaterANPETTIQYEVIEVVRGRKPAYQRERELIAEYEPTLNTF
Ga0315903_1102341533300032116FreshwaterYSFLRENPEVQIQYEVIEVVRGRKNAYQREREIIAEVAPSLNTF
Ga0334983_0235749_3_1283300034060FreshwaterLRNNVDAEWRYEVLEVVRGRKPAHQRERELIEVLTPTLNTF
Ga0334995_0375055_2_1243300034062FreshwaterRANPDGNWRYEVLEVVRGRKPAHQRERELTKQLKANLNEF
Ga0335001_0016937_1_1263300034064FreshwaterIRDNANASFTYEVLEIVRGRKPAHQRERELIAYLEPTLNTF
Ga0335019_0466965_642_7583300034066FreshwaterLADCEWRYEVLDVVRGRKPAHQSERALIDLFEPTLNTF
Ga0335012_0341250_636_7463300034093FreshwaterNASFTYEVLEIVRGRKPAHQRERELIAYLEPTLNTF
Ga0335030_0488404_637_7773300034103FreshwaterTLYSFLRENPEVQLQYEVLEVVRGRKPAYQRERELIAEYEPNLNTF
Ga0335035_0038601_2_1213300034105FreshwaterELAGAAWQYEVLEVIRGRKPAHQRERELIAEFEPSLNTF
Ga0335036_0846245_14_1513300034106FreshwaterMCQFIRNNANASFTYEVLEIVRGRKPAHQRERELIAYLEPTLNTF
Ga0335036_0877771_382_5103300034106FreshwaterFIRDNADASFTYEVLEIVRGRKPAHQRERELITDLEPTLNTF
Ga0335033_0030888_2_1243300034117FreshwaterRANPEVQIQYEVLEVVRGRKPAYQRERELIAEYEPNLNTF


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