Metagenome / Metatranscriptome Family F073135

Basic Information
Family ID	F073135
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	57 residues
Representative Sequence	KREIHVGIADATNYEVLSGLQEGEMVALPGDVDLKDGMPVKIVNTDASYVRGRGDAN
Number of Associated Samples	97
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.56 %
% of genes near scaffold ends (potentially truncated)	95.00 %
% of genes from short scaffolds (< 2000 bps)	89.17 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Most Common Taxonomy
Group	Bacteria (96.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.833 % of family members)
Environment Ontology (ENVO)	Unclassified (30.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.167 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.71% β-sheet: 18.82% Coil/Unstructured: 76.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF14559	TPR_19	63.33
PF13432	TPR_16	17.50
PF12704	MacB_PCD	10.83
PF02321	OEP	2.50
PF13414	TPR_11	1.67
PF07021	MetW	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	5.00

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.67 %
Unclassified	root	N/A	3.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.67 %
Unclassified	root	N/A	3.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.67 %
Unclassified	root	N/A	3.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.17 %
Unclassified	root	N/A	3.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.33 %
Unclassified	root	N/A	3.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Unclassified	root	N/A	3.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Unclassified	root	N/A	3.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Unclassified	root	N/A	3.33 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Unclassified	root	N/A	3.33 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100151340	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300002245\|JGIcombinedJ26739_100692094	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300002245\|JGIcombinedJ26739_101406124	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300003224\|JGI26344J46810_1007066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	856	Open in IMG/M
3300004091\|Ga0062387_101655486	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300004092\|Ga0062389_103534954	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300004092\|Ga0062389_104353810	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300004635\|Ga0062388_100406156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1185	Open in IMG/M
3300005181\|Ga0066678_10627517	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005545\|Ga0070695_100537934	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005610\|Ga0070763_10753582	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005950\|Ga0066787_10069486	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300006102\|Ga0075015_100956482	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300007255\|Ga0099791_10212816	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300007255\|Ga0099791_10257960	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300009038\|Ga0099829_11361714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300009089\|Ga0099828_10687177	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300009137\|Ga0066709_103509695	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300009143\|Ga0099792_10305501	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300009698\|Ga0116216_10587519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300010046\|Ga0126384_11547019	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300011120\|Ga0150983_14868603	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300011120\|Ga0150983_16586776	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300011269\|Ga0137392_10205849	All Organisms → cellular organisms → Bacteria → Acidobacteria	1611	Open in IMG/M
3300011269\|Ga0137392_10747169	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300011269\|Ga0137392_11465723	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300011270\|Ga0137391_10697500	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300012202\|Ga0137363_10219653	All Organisms → cellular organisms → Bacteria → Acidobacteria	1533	Open in IMG/M
3300012359\|Ga0137385_10650787	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300012362\|Ga0137361_10080105	All Organisms → cellular organisms → Bacteria → Acidobacteria	2789	Open in IMG/M
3300012363\|Ga0137390_10682558	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300012405\|Ga0134041_1284954	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300012582\|Ga0137358_10103900	All Organisms → cellular organisms → Bacteria → Acidobacteria	1925	Open in IMG/M
3300012929\|Ga0137404_12241546	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300012929\|Ga0137404_12271643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012930\|Ga0137407_10828979	All Organisms → cellular organisms → Bacteria → Acidobacteria	874	Open in IMG/M
3300013100\|Ga0157373_11400557	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300015245\|Ga0137409_10423825	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300015264\|Ga0137403_10050640	All Organisms → cellular organisms → Bacteria	4284	Open in IMG/M
3300016341\|Ga0182035_12147507	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300017934\|Ga0187803_10071766	All Organisms → cellular organisms → Bacteria → Acidobacteria	1363	Open in IMG/M
3300018468\|Ga0066662_10005182	All Organisms → cellular organisms → Bacteria	6379	Open in IMG/M
3300018468\|Ga0066662_11453619	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300020021\|Ga0193726_1373609	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300020579\|Ga0210407_10103305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2167	Open in IMG/M
3300020579\|Ga0210407_11158778	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300020579\|Ga0210407_11423769	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300020582\|Ga0210395_10283770	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300020583\|Ga0210401_10468743	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300020583\|Ga0210401_11123011	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300021046\|Ga0215015_10103157	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300021168\|Ga0210406_10876670	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300021170\|Ga0210400_10463154	All Organisms → cellular organisms → Bacteria → Acidobacteria	1046	Open in IMG/M
3300021180\|Ga0210396_11401914	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300021181\|Ga0210388_11630384	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300021401\|Ga0210393_10354553	All Organisms → cellular organisms → Bacteria → Acidobacteria	1194	Open in IMG/M
3300021401\|Ga0210393_11281642	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300021403\|Ga0210397_10365926	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300021405\|Ga0210387_11135892	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300021474\|Ga0210390_10538902	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300021475\|Ga0210392_10212543	All Organisms → cellular organisms → Bacteria → Acidobacteria	1356	Open in IMG/M
3300021477\|Ga0210398_11555432	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300021479\|Ga0210410_10906586	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300021559\|Ga0210409_11126352	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300021560\|Ga0126371_11641173	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300022557\|Ga0212123_10830192	Not Available	552	Open in IMG/M
3300022840\|Ga0224549_1049023	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300025915\|Ga0207693_10438845	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300025916\|Ga0207663_11051808	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300025935\|Ga0207709_11351357	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300026281\|Ga0209863_10126623	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300027565\|Ga0209219_1077339	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300027591\|Ga0209733_1135595	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300027629\|Ga0209422_1006396	All Organisms → cellular organisms → Bacteria → Acidobacteria	2902	Open in IMG/M
3300027660\|Ga0209736_1043409	All Organisms → cellular organisms → Bacteria → Acidobacteria	1297	Open in IMG/M
3300027701\|Ga0209447_10131351	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300027727\|Ga0209328_10127707	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300027729\|Ga0209248_10019937	All Organisms → cellular organisms → Bacteria → Acidobacteria	2097	Open in IMG/M
3300027767\|Ga0209655_10066713	All Organisms → cellular organisms → Bacteria → Acidobacteria	1198	Open in IMG/M
3300027768\|Ga0209772_10024662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1721	Open in IMG/M
3300027853\|Ga0209274_10138666	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300027862\|Ga0209701_10681290	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300027882\|Ga0209590_10059350	All Organisms → cellular organisms → Bacteria → Acidobacteria	2164	Open in IMG/M
3300027882\|Ga0209590_10621085	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300027895\|Ga0209624_10358574	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300027911\|Ga0209698_10684409	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300027915\|Ga0209069_10405059	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300028047\|Ga0209526_10448286	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300028138\|Ga0247684_1026934	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300028773\|Ga0302234_10472825	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300028792\|Ga0307504_10279668	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300028800\|Ga0265338_10681105	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300028906\|Ga0308309_11363939	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300028906\|Ga0308309_11794809	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300029636\|Ga0222749_10201868	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300029636\|Ga0222749_10229899	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300029636\|Ga0222749_10677735	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300030617\|Ga0311356_11460523	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300030687\|Ga0302309_10197242	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300030844\|Ga0075377_10602270	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300031231\|Ga0170824_107450665	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300031231\|Ga0170824_119318185	All Organisms → cellular organisms → Bacteria → Acidobacteria	1568	Open in IMG/M
3300031233\|Ga0302307_10674699	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300031446\|Ga0170820_13923672	All Organisms → cellular organisms → Bacteria → Acidobacteria	4209	Open in IMG/M
3300031708\|Ga0310686_111803745	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300031715\|Ga0307476_10843091	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300031715\|Ga0307476_10945221	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300031820\|Ga0307473_10504584	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300031820\|Ga0307473_10986647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300031823\|Ga0307478_11359705	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300031846\|Ga0318512_10582419	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300031962\|Ga0307479_10251082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1746	Open in IMG/M
3300031962\|Ga0307479_10887110	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300032180\|Ga0307471_100076469	All Organisms → cellular organisms → Bacteria → Acidobacteria	2919	Open in IMG/M
3300032180\|Ga0307471_101575522	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300032180\|Ga0307471_101985137	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300032828\|Ga0335080_12064993	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.50%
Host-Associated	Host-Associated	2.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.83%
Aquatic	Environmental → Aquatic	11.67%
Plants	Host-Associated → Plants	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.67%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Peat	Environmental → Terrestrial → Peat	4.17%
Sediment	Environmental → Aquatic → Sediment	2.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.33%
Loam	Environmental → Terrestrial → Soil → Loam	15.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003224	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001513401	3300002245	Forest Soil	ALGKSRLIRRELQLGIADSTNFEVISGLQENEMVALPGDAVLHDGMAVKIVNTDAAYVRGHSDGR*
JGIcombinedJ26739_1006920941	3300002245	Forest Soil	VGKATLERREIHVGIADATNYEVVSGLREGEMVALPGDVDLKDGMPVKIVKTDASYIRGRSEAN*
JGIcombinedJ26739_1014061242	3300002245	Forest Soil	EVQVGIASATSYEIMSGLTEHDLVALPGDFDLRDGMTVKVVSTDSSNVRGQQ*
JGI26344J46810_10070661	3300003224	Bog Forest Soil	LEKREIQVGIADTTSYEVVSGLQEDDLIALPGDVDLRDGMVVKVVNTDSAYVRGQR*
Ga0062387_1016554861	3300004091	Bog Forest Soil	IHVGIADAISYEVTSGLQEGELIALPGDFDLHDGMAVKIVNTDTSYLPGQKND*
Ga0062389_1035349541	3300004092	Bog Forest Soil	EKREIQVGIADTTSYEVVSGLQESDMVAMPGEFDLRDGMAVKVVNTDSAYVRGQR*
Ga0062389_1043538101	3300004092	Bog Forest Soil	KQGDFAKTKLEKREIHVGIADSTNYEVASGLQQGEMVALPGDIDLKDGMNVRIMNTDASSVKGRPDGN*
Ga0062388_1004061561	3300004635	Bog Forest Soil	ADTTSYEVVSGLQEGDLVAMPGDVDLRDGMAVKVMNTDAAYVRGQR*
Ga0066678_106275172	3300005181	Soil	LEKREIQVGVASATSYEVAGGLQEGEMVALPGDVDLKDGMAVRVVSTR*
Ga0070695_1005379342	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	EKREIRVGIADATSYEVVSGLEEGEMVALPGDTDLHDGMDVQVVKTNAA*
Ga0070763_107535822	3300005610	Soil	LEKREIHVGIADSTNYEVTSGLQQGEMVALPGDIDLKDGMAVRIMNTDASSVRGRQDAN*
Ga0066787_100694861	3300005950	Soil	KREIHVGIADSTNYEVTSGLQPDEMVALPGDIDLKDGMAVRIMNTDASSVQGRQDGN*
Ga0075015_1009564821	3300006102	Watersheds	VHVGIADATNYEIVSGLQEGEMVALPGDVDLRDGMTVQIVNTDADEVRGRQDEN*
Ga0099791_102128162	3300007255	Vadose Zone Soil	LEKREIHVGIADATSYEVVSGLQEGEMVALPGDVDLRDGMYVIVVNTEVANFRGNWNG*
Ga0099791_102579601	3300007255	Vadose Zone Soil	LEKREIHVGIADATSYEVVSGLQEGEMVALPGDVDLRDGMYVIVVNTEVANFRGNSNG*
Ga0099829_113617142	3300009038	Vadose Zone Soil	EKREIHVGIADATNYEVVSGLQEGELVALPGDVDLRDGMDVIVVATEAGNFQGRANG*
Ga0099828_106871772	3300009089	Vadose Zone Soil	VNQTRLEKREIRVGIASATDYEILSGLIEGDKVALPGEVELKDGMAVRVVQTQ*
Ga0099827_109730561	3300009090	Vadose Zone Soil	TRLHKREIKVGIASATKYEVLEGLSEGEKLALPGDIELRDDMAVRLAG*
Ga0066709_1035096952	3300009137	Grasslands Soil	VLEKRRIQVGIADATSYEVLSGLNEKDFVALPGDVDLRDGMAVKIVNTDAAFVRGRKDD*
Ga0099792_103055012	3300009143	Vadose Zone Soil	RNALGVGKATLQKREIRVGIADAANYEVLSGLQEGEMVALPGDVDLKDGMPVKITNTDASYVRGRSESD*
Ga0116216_105875192	3300009698	Peatlands Soil	REIHVGIADATNYEVVSGLQEDEMVALPGDVDLRDGMDVIVVNSTAGTSGRAKTHA*
Ga0126384_115470192	3300010046	Tropical Forest Soil	FVIIKNPLSVGKSKLQKREIRVGIADATNYEVLNGLQEGEMVALPGDAVLKEGMAVKIVNTDSSSVRGRSDAN*
Ga0150983_148686031	3300011120	Forest Soil	KNELGVGKSRLEKREIQVGIADATSYEVMGGLQEGEMVALPGDTDLHDGMAVQVVNTNAA
Ga0150983_165867761	3300011120	Forest Soil	LQKREIRVGIADATNYEVISGLQEGEMVALPGDVDLKDGMPVKITNTDASYIRGRSES*
Ga0137392_102058491	3300011269	Vadose Zone Soil	RLEKREIRVGIASATDYEILSGLIEGDKVALPGDVELKDGMAVRVVQTQ*
Ga0137392_107471691	3300011269	Vadose Zone Soil	KREIHVGIADATNYEVLSGLQEGEMVALPGDVDLKDGMPVKIVNTDASYVRGRGDAN*
Ga0137392_114657232	3300011269	Vadose Zone Soil	KATLEKREIHVGIADATNYEVLGGLQEGEMVALPGDVDLKDGMPVKIVNTDASYIRGRSESD*
Ga0137391_106975002	3300011270	Vadose Zone Soil	VGKATLEKREIRVGIADATNYEVLGGLQEGEMVALPGDVDLKDGMPVKIVNTDASYIRGRSESD*
Ga0137363_102196531	3300012202	Vadose Zone Soil	KREIHVGIADATSYEVVSGLQEGEMVALPGDVDLHDGMYVIVVNTEVANFRGNSNG*
Ga0137385_106507872	3300012359	Vadose Zone Soil	EKREIRVGIASATDYEILSGLIEGDKVALPGDVELKDGMAVRVVQTQ*
Ga0137361_100801051	3300012362	Vadose Zone Soil	KREIHVGIADATSYEVVSGLQEGEMVALPGDVDLRDGMYVIVVNTEVANFRGNSNG*
Ga0137390_106825582	3300012363	Vadose Zone Soil	LGVGKATLEKREIHVGIADATNYEVTGGLNEGEMVALPGDVDLKDGMAVTIVNTDASYIRGRTDAN*
Ga0134041_12849541	3300012405	Grasslands Soil	REIRVGIADATNYEVVSGLEEGEWVALPGDVDLRDGMDVIVLNTSAGNY*
Ga0137358_101039003	3300012582	Vadose Zone Soil	EIHVGIADATSYEVVSGLQEGEMVALPGDVDLRDGMYVIVVNTEVANFRGNSNG*
Ga0137404_122415461	3300012929	Vadose Zone Soil	IADAANYEVLSGLQEGEMVALPGDVDLKDGMPVKITNTDASYVRGRSESD*
Ga0137404_122716432	3300012929	Vadose Zone Soil	EKREIHVGIADATSYEVVSGLQEGEMVALPGDVDLRDGMYVIVVNTEVANFRGNWNG*
Ga0137407_108289792	3300012930	Vadose Zone Soil	EIHVGIADATSYEVVSGLQEGEMVALPGDVDLRDGMYVIVVNTEVANFRGNWNG*
Ga0157373_114005572	3300013100	Corn Rhizosphere	STNYEVVSGLNAGEMIALPGDVDLKDGMSVRIMNTDDSTVRARQDGN*
Ga0137418_108448362	3300015241	Vadose Zone Soil	LQKREIKVGIASATDYEVLEGLREGEVLALPGDVELRDGLGVRVVRGG*
Ga0137409_104238251	3300015245	Vadose Zone Soil	GIADAANYEVLDGLQEGEMVALPGDVDLKDGMPVKITNTDASYVRGRSESD*
Ga0137403_100506402	3300015264	Vadose Zone Soil	VGIADATNYEVLSGLQEGEMVALPGDVDLKDGMPVKIVNTDASYIRGRSEAN*
Ga0182035_121475071	3300016341	Soil	LEKRTIQVGIADATSYEVVGGLTEEEMVAMPGDFDLRDGMAVQIVNTDVAYLRGKG
Ga0187803_100717663	3300017934	Freshwater Sediment	GIADATNYEIVSGLQEGEMVALPGEVDLRDGMTVQIVNTDADEVRGRQDEN
Ga0066662_100051826	3300018468	Grasslands Soil	DASLGVGKKYLEKREIQVGVASATSYEVAGGLQEGEMVALPGDVDLKDGMAVRVVSTR
Ga0066662_114536192	3300018468	Grasslands Soil	VNRSKLEKREIRVGIASATDYEILSGLIEGDKVALPGDVDLKDGMALRVVRTQ
Ga0193726_13736091	3300020021	Soil	QVGIADASSFEVVSGLNENEMVALPGDAVLHDGMAVKIVSTDASYVRGHRDGE
Ga0210407_101033053	3300020579	Soil	GVGKATLEKREIHVGIADATNYEVLGGLQEGEMVALPGDVDLKDGMPVKIVNTDASYIRGRESD
Ga0210407_111587782	3300020579	Soil	KLEKREIKVGIADATSYEVMSGLQEGEMVALPGDTDLHDGMAVQVVNTNAA
Ga0210407_114237692	3300020579	Soil	KREIHVGIADATNYEVVGGLQEGEMVALPGDVDLKDKMPVRIVNTDVSYIRGRSESN
Ga0210395_102837703	3300020582	Soil	ADATSYEVTSGLQEGEMVALPGDFDLRDGMPVKVVNTDTSYLQGSKNE
Ga0210401_104687432	3300020583	Soil	EIHVGIADATSYEVTSGLQEGEMVALPGDFDLRDGMPVKVVNTDTSYLQGSKNE
Ga0210401_111230112	3300020583	Soil	AKTKLEKREIHVGIADSTNYEVTSGLQQGEMVALPGDIDLKDGMNVRIMNTDASSVKGRQDAN
Ga0215015_101031572	3300021046	Soil	VGKSKLEKRQVHVGIADATKYEILSGLQEGEMVALPGDVDLRDGMKVKVVNTDADEVQGRQDEN
Ga0210406_108766702	3300021168	Soil	KREIRVGIADATSYEVMSGLQEGEMVALPGDTDLHDGMAVQVVNTNAA
Ga0210400_104631542	3300021170	Soil	KATLQKREIRVGIADATNYEVIDGLQEGEMVALPGDVDLKDGMPVKITNTDASYIRGRSESD
Ga0210396_114019141	3300021180	Soil	HVGVADSTNYEVISGLNAGEMIALPGDAELKNAMPVRIMNTDDSAVKARQDGN
Ga0210388_116303841	3300021181	Soil	KREIHVGIADSTNYEVTSGLQQGEMVALPGDIDLKDGMAVRIMNTDASSVRGRQDAN
Ga0210393_103545532	3300021401	Soil	EIQVGIADATSYEVMGGLQEGEMVALPGDTDLHDGMAVQVVNTNAA
Ga0210393_112816422	3300021401	Soil	GKSTLEKREIHVGIADATSYEVTSGLQEGEMVALPGDFDLRDGMPVKVVNTDTSYLQGSKNE
Ga0210397_103659261	3300021403	Soil	YVVKQGDFGKAILEKREIHVGIADSTNYEVTGGLQQGEMVALPGDTDLKDGMAVKIMNTDASSVKGRQDAN
Ga0210387_111358922	3300021405	Soil	KTKLEKREIHVGIADSTNYEVTNGLQQGEMVALPGDIDLKDGMNVRIMNTDASSVKGRQDAN
Ga0210390_105389021	3300021474	Soil	VGKSKLEKREIKVGIADATSYEVMSGLQEGEMVALPGDTDLHDGMAVQVVNTNAA
Ga0210392_102125431	3300021475	Soil	GELGKTKLERREIQVGIADSTNYEVVAGLNEGEMIALPSDVDLKDAMPVRIMNTDNSAVRARQDGN
Ga0210398_115554321	3300021477	Soil	SRLEKREIRVGIADATSYEVMSGLQEGEMVALPGDTDLHDGMAVQVVNTNAA
Ga0210410_109065862	3300021479	Soil	TSYEIMSGVAEHDLVALPGDFDLRDGMTVKVVSTDSSNVRGQQ
Ga0210409_111263522	3300021559	Soil	EIKVGIADATSYEVIGGLQEGEMVALPGDVDLRDGMAVQVVNTNVV
Ga0126371_116411732	3300021560	Tropical Forest Soil	EKREIHVGIADFTSYEIVSGLQQGEMVALSGDVDLKDGMPVKVVNADISSLQGQKDEQ
Ga0212123_108301921	3300022557	Iron-Sulfur Acid Spring	SRLERREIQLGIADSTNFEVISGLQENEMVALPGDAVLHDGMAVKIVNTDDAYVRGHSDG
Ga0224549_10490231	3300022840	Soil	KTLEKREIRVGIADATSYEVLNGLQEGEMVALPGDFDLRDGMAVKVVNTDAAYVRGTRD
Ga0207693_104388452	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LSVNKSRLERREIRVGIADSTNYEVTSGLQENEMIALPGDIELKDGMVVRVMNTDASRVRGRSDAN
Ga0207663_110518081	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	HNELSVNKSRLERREIHVGIADSTSYEVTSGLRENEMIALPGDIELKDGMVVRVMNTDSSRMRGRSDAN
Ga0207709_113513572	3300025935	Miscanthus Rhizosphere	RREIRVGIADSTNYEVTSGLQENEMIALPGDIELKDGMVVRVMNTDASRVRGRSDAN
Ga0209863_101266232	3300026281	Prmafrost Soil	FAKTKLEKREIHVGIADSTNYEVVHGLQQGEMVALPGDVDLKDGMTVRIMNTDASSVRGRQDAN
Ga0209219_10773392	3300027565	Forest Soil	RLIRRELQLGIADSTNFEVISGLQENEMVALPGDAVLHDGMAVKIVNTDAAYVRGHSNGR
Ga0209733_11355951	3300027591	Forest Soil	ARRELQLGIADSTNFEVISGLQENEMVALPGDAVLHDGMAVKIVNTDAAYVRGHSDGR
Ga0209422_10063961	3300027629	Forest Soil	ALGKSRLARREIQLGIADSTNFEVISGLQENEMVALPGDAVLHDGMAVKIVNTDSAYVRGHSDGR
Ga0209736_10434093	3300027660	Forest Soil	QNALGKSRLARREIQLGIADSTNFEVISGLQENEMVALPGDAVLHDGMAVKIVNTDSAYVRGHSDGR
Ga0209447_101313512	3300027701	Bog Forest Soil	KKNELGVGKSRLEKREIRVGIADATSYEVMSGLQEGEMVALPGDTDLHDGMAVQVVNTNA
Ga0209328_101277072	3300027727	Forest Soil	EKREIRVGIADSTNYEVVSGLQEGEMVALPGDIELRDGMPVRVVNMDASYMRGRADAN
Ga0209248_100199371	3300027729	Bog Forest Soil	MSFLHVGIADSTSYEVTSGLLEGEMVALPGDFDLHDGMPVKIVNTDTSYLQGPKND
Ga0209655_100667132	3300027767	Bog Forest Soil	SKLEKREIHVGIADSTNYEVTSGLQQGEMVALPGDIDLKDGMNVRIMNTDASSVKGRQDA
Ga0209772_100246621	3300027768	Bog Forest Soil	VGIADTTSYEVVSGLQESDMVAMPGEFDLRDGMAVKVVNTDSAYVRGQR
Ga0209274_101386662	3300027853	Soil	KREIKVGIADATSYEVMSGLQEGEMVALPGDTDLHDGMAVKVVDTNAS
Ga0209701_106812901	3300027862	Vadose Zone Soil	LSKREIQVGIADATNYEVIAGLNEDEMVALPGDVDLQEGMPVKILNSTGEYVRGTPNGS
Ga0209283_107761612	3300027875	Vadose Zone Soil	REIKVGIASATKYEVLEGLSGGETVALPGDIELRDDMAVRLAG
Ga0209590_100593503	3300027882	Vadose Zone Soil	REIHVGIADATNYEVVSGLQEGEMVALPGDVDLRDGMTVDAVSADGGSQRGT
Ga0209590_106210852	3300027882	Vadose Zone Soil	GVNRSKLEKREIRVGIASATDYEILSGLIEGDKVALPGDVELKDGMAVRVVQTQ
Ga0209624_103585742	3300027895	Forest Soil	SDAERDRVIQVGIADSTNYEVVSGLNEGEMIALPGDVDLKDQMPVRIMNTDNSAVKARQDGN
Ga0209698_106844091	3300027911	Watersheds	ALGVGKATLQKREIHVGIADATNYEVLGGLQEGEMVALPGDVDLKDGMPVKIVNTDARYIRGRSESD
Ga0209069_104050592	3300027915	Watersheds	VRVGIADATNYEIVSGLQEGEMVALPGDVDLRDGMRVQIVNTDADELRGRQDEN
Ga0209526_104482861	3300028047	Forest Soil	NALGKSRLARRELQLGIADSTNFEVISGLQENEMVALPGDAVLHDGMAVKIVNTDAAYVRGHSDGR
Ga0247684_10269342	3300028138	Soil	EIRVGIADATSYEVMSGLQEGEMVALPGDTDLKDGMAVQVVNTNAA
Ga0302234_104728252	3300028773	Palsa	LSVGQSKLEKREIQVGIADAASYEVLSGLAETDLVALPGDIELRDGMAVKVVNTDSAYVRGTR
Ga0307504_102796681	3300028792	Soil	SILEKREIQVGIADATSYEVVGGLQEGEMVALPGDVDLRDGMDVIVVNTEVANFRGNSNG
Ga0265338_106811052	3300028800	Rhizosphere	KVGIADATSYEVLDGLQESDMVALPGDFDLRDGMAVKVVNTDSAYVRGAH
Ga0308309_113639391	3300028906	Soil	KEGDFGKAILEKREIHVGIADSTNYEVTGGLQQGEMVALPGDTDLKDGMAVKIMNTDASSVKGRQDAN
Ga0308309_117948091	3300028906	Soil	QLGIADSTNFEVISGLQENEMVALPGDAVLHDGMAVKIVNTDAEYVRGHSNGR
Ga0222749_102018682	3300029636	Soil	KREIHVGIADAPNYEVISGLQEGEMVALPGDVDLRDGMDVIVVATEVANFRVRQDG
Ga0222749_102298991	3300029636	Soil	REVQLGIADSTNFEVLSGLQENEMVALPGDAVMHDGMAVKIVNTDAAYVRGHSDAR
Ga0222749_106777352	3300029636	Soil	LEKREIHVGIADATNYEVVGGLQEGEMVALPGDVDLKDKMPVRIVNTDVSYIRGRSESN
Ga0311356_114605232	3300030617	Palsa	QSKLEKREIQVGIADAASYEVLSGLAETDLVALPGDIELRDGMAVKVVNTDSAYVRGTR
Ga0302309_101972422	3300030687	Palsa	KLQRREIRVGIADATDYEVLSGIRDDDLIALPGDIDLRDGMAVRVINTDASSVRGRSDGH
Ga0075377_106022701	3300030844	Soil	REIQVGIADSTNYEVVSGLKEGEMVALPGDVELKDAMPVRIMNTDDSAVRARQDGN
Ga0170824_1074506652	3300031231	Forest Soil	RREIQVGIADSTNYEVISGLNAGEMIALPSDVELKNAMPVRIMNTDDSAVKARQDGN
Ga0170824_1193181851	3300031231	Forest Soil	EIHVGIADSTSFEVVSGLQEKEMVALPGDAVLHDGMAVKIVNTDSAYIRGHRDGQ
Ga0302307_106746991	3300031233	Palsa	REIRVGIADATSYEVLNGLQEGEMVALPGDFDLRDGMAVKVVNTDAAYVRGTRD
Ga0170820_139236729	3300031446	Forest Soil	RREIQVGIADSTNYEVVSGLKEGEMVALPGDVELKDATPVRIMNTDDSAVRARQDGN
Ga0310686_1118037451	3300031708	Soil	NPLAVSQSKLEKREIQVGIADTTSYEVVSGLLESDMVARPGEFDLRDGMAVKVVNTDSAYVRGQR
Ga0307476_108430912	3300031715	Hardwood Forest Soil	VGIADSTNYEVVSGLKEGEMVALPGDVELKDAMPVRIMNTDDSAVRARQDGN
Ga0307476_109452212	3300031715	Hardwood Forest Soil	IKVGIADSISYEVVSGLQQDELVALPGDTDLHDGMAVKVVNTDSDYVRGQR
Ga0307473_105045841	3300031820	Hardwood Forest Soil	GKSILEKRRIQVGIADATSYEVLSGLDEKDLVALPGDVDLRDGMAVKIVNTDASYVRGRKDD
Ga0307473_109866471	3300031820	Hardwood Forest Soil	LEKREIHVGIADATSYEVVSGLQEGELVALPGDVDLRDGMDVIVVNTEAANFWRDLNG
Ga0307478_113597051	3300031823	Hardwood Forest Soil	VKENGKTKLEKREVQVGIASATSYEIISGLNEHEMVALPGDFDLRDGMTVKVVSTDSSNVRGQQ
Ga0318512_105824191	3300031846	Soil	TLEKREIRVGIADATNYEVVSGLEEGEWVALPGDVDLRDGMNVIVVNTSVGNY
Ga0307479_102510821	3300031962	Hardwood Forest Soil	REIRVGIADATNYEVLGGLQEGEMVALPGDVDLKDGMPVKIVNTDASYIRGRSESD
Ga0307479_108871102	3300031962	Hardwood Forest Soil	TLEKRQIHVGIADATNYEVLGGLQEGEMVALPGDVDLKDGMPVRIIDTDASYIRGRSESD
Ga0307471_1000764691	3300032180	Hardwood Forest Soil	EKREIHVGIADATSYEVVSGLQEGEMVALPGDVDLRDGMDVIVVNTEAANFWGDLNG
Ga0307471_1015755221	3300032180	Hardwood Forest Soil	REIRVGIADAANYEVLDGLQEGEMVALPGDVDLKDGMPVKITNTDASYVRGRSESD
Ga0307471_1019851371	3300032180	Hardwood Forest Soil	GVGKATLEKREIRVGIADATNYEVLGGLQEGEMVALPGDVDLKDGMPVKIVNTDASYIRGRSESD
Ga0335080_120649932	3300032828	Soil	VGIADATSFEVVSGLHDGEVIALPGDSDLHDGQRVQVVSTDAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073135

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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