Metagenome / Metatranscriptome Family F073165

Basic Information
Family ID	F073165
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	99 residues
Representative Sequence	VRPHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR
Number of Associated Samples	100
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	10.83 %
% of genes from short scaffolds (< 2000 bps)	10.83 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Unclassified (89.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (23.333 % of family members)
Environment Ontology (ENVO)	Unclassified (30.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.167 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 48.78% Coil/Unstructured: 51.22%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
b.1.1.1: Immunoglobulin	d4nzuh_	4nzu	0.77
b.1.1.1: Immunoglobulin	d1tjgh1	1tjg	0.76
b.1.2.1: Fibronectin type III	d1wk0a1	1wk0	0.76
b.1.1.1: Immunoglobulin	d5e56a_	5e56	0.76
b.1.2.1: Fibronectin type III	d1x5xa1	1x5x	0.75

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13473	Cupredoxin_1	59.17
PF00127	Copper-bind	2.50
PF02649	GCHY-1	0.83
PF10099	RskA	0.83
PF13795	HupE_UreJ_2	0.83
PF02777	Sod_Fe_C	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.83
COG1469	GTP cyclohydrolase FolE2	Coenzyme transport and metabolism [H]	0.83

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.17 %
All Organisms	root	All Organisms	10.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.17 %
cellular organisms	root	All Organisms → cellular organisms	10.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.17 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.17 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_117987814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300005439\|Ga0070711_101226695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300005471\|Ga0070698_101985709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300005718\|Ga0068866_11022753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300006904\|Ga0075424_101832866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300009012\|Ga0066710_104870241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300009176\|Ga0105242_11473315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300010147\|Ga0126319_1574244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300010366\|Ga0126379_11307510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300010371\|Ga0134125_12135065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300015371\|Ga0132258_11436208	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300025935\|Ga0207709_11137693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300030830\|Ga0308205_1001250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1799	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.67%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	8.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.33%
Freshwater	Environmental → Aquatic → Freshwater	6.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Sediment	Environmental → Aquatic → Sediment	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.67%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	23.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	5.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.17%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.50%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010065	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010083	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010094	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010125	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWSG_02744250	2067725003	Soil	FAGRSIYLQRRSNFGQWVTVEKLKLGPLSGRIFTAPHKKGTFTYRVYMTTNQAGTGYLETWSNSVRVRYRH
JGI10216J12902_1123153452	3300000956	Soil	PTILTSYSVRWKTATSQTVTVQVRPKLTLTRTSRTRLFAKIAATPSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNSVRVRYRH*
JGI10216J12902_1179878141	3300000956	Soil	NEQVLILAQPYGSSAQQIATLETGTGGAFYYTTAPTMFTQYSVRWKSVTSQTVTVQVRPKLTLSRTSSTRLFAKIAAAPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTSTYRVYMTTNQAGTGYLETSSNLVRVRYRR*
A10PFW1_122048621	3300001538	Permafrost	VFTYTAGPTILTSYSVKWKTATSQTVSVQVRPRLTLAHTSATRLFARVTATPSFASHSIYLQRRSQFGQWVTVEKLKLGPLSGRSFKVPHRKGRFTYRVYMTTNQAGAGYLDTWSNSVSVRYRR*
C688J35102_1203236171	3300002568	Soil	SVRWKTATSQTVTVQVRPKLTLTRTSRTRLFAKLAATTSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRH*
Ga0062595_1019514802	3300004479	Soil	SFAGRTIYFQRHSQFGQWVTISKLKLGPLSGRIFSIPHRKGTTYYRVYMTTNQAGLGYLETWSNSARIHFST*
Ga0062591_1025166612	3300004643	Soil	RWKTATSQTVTVQVRPKLTLTRTSRTRLFAKITATPSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNSVRVNYRR*
Ga0062594_1014228631	3300005093	Soil	LTLTRSSKWRFYARATATSSLAGRKIYFQRHSQFGQWVTLSSLKLGPLSGRIFKVPHVKGTVYYRVYMTTNQAGLGYLETWSTSSRVHFNK*
Ga0066683_107784112	3300005172	Soil	AKWKTAESQTVTVQVRPRLTLTKTGSTRLFARASATLSFAGRSIYLQRRSSFGQWVTVEKLKLGPNSGRIFKAPHRKGTFTYRVYITTNQAGTGYLDAWSNSVRVRYRR*
Ga0066676_100777663	3300005186	Soil	VQVRPHLTLSRTSRTRLSARITSTKSFARHFIYLQRRSSFGQWVTVEKLRLGPLSGRLFTAPHRKGTTTYRVFMTTNQAGLGYLATWSNSVRVRYRH*
Ga0066676_101944342	3300005186	Soil	RPKLTLNRMTATRLYAKITASHPFAGRTIYLQRRSSFGQWVTVQKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRH*
Ga0066675_112339061	3300005187	Soil	STRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0070673_1018182372	3300005364	Switchgrass Rhizosphere	RWKTATSQTVTVQVRPKLTLTRTSRTRLFAKITATPSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNTVRVRYRR*
Ga0070710_106123092	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	FAKFAASASFAGRTMYLQRRSQFGQWVTVQKLKLGPNSGRIFTAPHVKGTSTYRAYMTTNQAGTGYLETWSNSVRVHYRR*
Ga0070711_1012266951	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QPYGSSAQQIATLMTGAGGTFSYQTSPTILTTYSVRWKTATSQTVMVQVRPSVFLTRTGTARLHARVKATPSFAGRTIYLQRMSKFGQWVTVEKLKLGPNSGRIFTAPHKKGTFTYRVYMTTNQAGTGYLDTWSNTVRVRYRH*
Ga0070708_1021396251	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PTILTTYSVKWRTAVSQTVTAQVRPRLTLARTSKTRLYAKTGATPSYAGKSIYLQRRSSFGQWVTVEKLMLGPLGGRIFTAPHRKGTFTYRVYMTTNQAGLGYLDAWSNAVQVHYSR*
Ga0070707_1004943621	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SIYLQRRSSFGQWVTVEKLMLGPLGGRIFTAPHRKGTFTYRVYMTTNQAGLGYLDTWSNAVQVHYSR*
Ga0070707_1021099571	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PRLTLAHTSATRLFARVTATPSFAGRSIYLQRRSQFGQWVTVEKLKLGQLSGRSFKAPHRKGRFTYRVYMTTNQAGAGYLDTWSNSVSVRYRR*
Ga0070698_1019857091	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AQPFGSSPQQVANLMTGAGGAFVYPTTPNLLTIYTAKWKTAASQPVTVQVRPKLTLAKTSATRLFAKITGTRSFAARSIYVQRQSSFGQWVTVEKLKLGPNSGRIFTAPHQKGTFTYRVYMTTNQAGAGYLDTWSNSVRVRYRR*
Ga0073909_103339161	3300005526	Surface Soil	EGRTISVQRRSSFGQWVTVQKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRK*
Ga0073909_104606271	3300005526	Surface Soil	PKLTLTRNHTRLFAKVAATPSFAGRTIYLQRQSKFGQWVTVERLKLGPNSGRSFKAPHVKGTFTYRVYMTTNQAGTGYLETWSNTARVHFRR*
Ga0070684_1011047452	3300005535	Corn Rhizosphere	WKTASSQTVTVQVRPKLTLTRSSKWRFFAKVTATPSFAGRSIYFQKHSQFGQWVTVSKLKLGPLSGRIFNVPHQKGTTYYRVYMTTNQAGLGYLETWSNSARVHFSV*
Ga0070696_1015516302	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RSIYLQRRSQFGQWVTVEKLKLGPLSGRSFKAPHRKGRFIYRVYMTTNQAGAGYLDTWSNSVSVRYRR*
Ga0066698_105132691	3300005558	Soil	TPTILTNYSATWKGAASQKVTVQVRPHLTLSRTSRTRLSARITSTKSFARHFIYLQRRSSFGQWVTVEKLRLGPLSGRLFTAPHRKGTTTYRVFMTTNQAGLGYLATWSNSVRVRYRH*
Ga0070702_1014819152	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	AKLGGTHSFAGRSIYLQRRSNFGQWVTVEKLKLGPLSGRIFTAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRR*
Ga0068866_110227531	3300005718	Miscanthus Rhizosphere	AQPFGSSTQQVASLVTGTGGTFTYTSTPTALTYYSVKWKTASSQAVVVQVRPKLTLNKMSATRLFAKITASHPFEGRSILVQRRSSFGQWVTVEKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRR*
Ga0075424_1018328662	3300006904	Populus Rhizosphere	TGIGGAFVYTTNPSVLTVYSVKWKTAMSQPVTVQVRPKLTLNRMTATRLYAKITASHPFAGRTIYLQRRSSFGQWVTVQKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRH*
Ga0066710_1048702411	3300009012	Grasslands Soil	VILGGGGSDTITAGTGGSFTYSTSPTMLTMYSAKWKGAQSQTVTVQVRPQLTLSRSSSSRLYAKVAATPSFAGRFISLQRRSAFGQWVTVEKLKLGPNSGRIFTAPHKKGTFTYRVYMTTNQAGTGYLDTWSNSVRVRYRH
Ga0105243_115016661	3300009148	Miscanthus Rhizosphere	VTVQVRPKLTLTRTSATRLFAKITATPSFAGRSIYLQRPSKFGQWITVEKLKLGPNSGRIFTAPHKKGTTTYRVFITTNQAGTGYLTTASNSVRVRYRH*
Ga0105242_101997933	3300009176	Miscanthus Rhizosphere	FAKITASHPFEGRSILVQRRSSFGQWVTVEKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRH*
Ga0105242_114733152	3300009176	Miscanthus Rhizosphere	YGSSAQQVATLMTGAGGAYSYVTSPTIFTAYSVRWKNTASQSVAVQVRPRLTLTRTSATRLFAKITATPSFAGRSILLQRPSKFGQWVTVEKLKLGPNSGRIFTAPHKKGTTTYRVFITTNQAGTGYLTTSSNTVRVRYRR*
Ga0105242_121613891	3300009176	Miscanthus Rhizosphere	RPKLTLTRTTATRLFAKLGGTHSFAGRSIYLQRRSNFGQWVTVEKLKLGPLSGRIFTAPHKKGTFTYRVYMTTNQAGTGYLETWSNSVRVRYRH*
Ga0126310_106057681	3300010044	Serpentine Soil	SAYTTYSVKWKNATSQTVTVQVRPKLTLTRSSKWRFYARATAAPSLAGRKIYFQRHSQFGQWVTVSSLKLGPLSGRIFKVPHVKGTTYYRVYMTTNQAGLGYLETWSTTSRVHFSK*
Ga0127435_1371862	3300010065	Grasslands Soil	LFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127457_10242071	3300010081	Grasslands Soil	AGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127478_10731962	3300010083	Grasslands Soil	LTSYSVRWKTATSQTVTVQVRPHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127480_10711341	3300010094	Grasslands Soil	ATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127440_11287832	3300010100	Grasslands Soil	VQVRPHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127481_10680561	3300010101	Grasslands Soil	LTSYSVRWKTATSQTVTVQVRPHVTLTRTGSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127472_10002151	3300010106	Grasslands Soil	TILTNYAAKWKTAESQTVTVQVRPRLTLTKTGSTRLFARASATPSFAGRSIYVQRRSSFGQWVTVEKLKLGPNSGRIFTAPHRKGRFTYRVYMTTNQAGTGYLESWSNSVRVRYRH*
Ga0127474_10180501	3300010108	Grasslands Soil	TRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127458_10014503	3300010112	Grasslands Soil	KTATSQTVTVQVRPHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127458_10147752	3300010112	Grasslands Soil	SIYLQRHSSFGQWVTVGKLKLGPLSGRIFKAPHKKGRFIYRVYITVNQAGAGYLDGSSNAVRVRYRH*
Ga0127443_11026362	3300010125	Grasslands Soil	FAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127486_11238491	3300010128	Grasslands Soil	LSRTSRTRLSARITSTKSFARHFIYLQRRSSFGQWVTVEKLRLGPLSGRLFTAPHRKGTTTYRVFMTTNQAGLGYLATWSNSVRVRYRH*
Ga0127493_10187431	3300010130	Grasslands Soil	HVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127456_11596571	3300010140	Grasslands Soil	TILTSYSVRWKTATSQTVTVQVRPHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0127499_10427211	3300010141	Grasslands Soil	QTVTVQVRPKLTLNRTTATRLFAKITATPSFAGHTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0126319_12474611	3300010147	Soil	KITASHPFEGRSILVQRRSSFGQWVTVEKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRH*
Ga0126319_15742441	3300010147	Soil	LMTAAGGTFAYPTNPTVYTVYSVKWKTATSQPVTVQVRPKLTLARTVATRLFAKITASHPFAGRSIYVQRRSSFGQWVTVEKLKLGPLSGRIFTAPHRKGTFTYRVYMTTNQAGSGYLDTWSNSVRVRYRH*
Ga0126318_100450501	3300010152	Soil	TSQTVTVQVRPSITLTRSGRTRLFTRVKATPSFAGRTVYVQRLSGFGQWVTVEKLKLGPNSGRIFTAPHRKGTSTYRIYMTTNQAGTGYLATSSNSVRVRYRH*
Ga0126379_113075101	3300010366	Tropical Forest Soil	QPYGSSAQQVATLVTGAGGAFSYVVAPTILTTYTVHWKTATSQAIIVQVRPIMTVTRTGRTRLFAHIKATPSYAGHTIYLQRLSAFGQWVTVEKLRLGPNSGRRFTAPHKKGTFTYRVYMTTNQAGTGYLDTWSNSVRVRYRH*
Ga0134125_121350652	3300010371	Terrestrial Soil	ATLVTGTGGAFTYTSTPTALTYYSVKWKAASSQAVVVQVRPKLTLNRMSATRLFAKITASHPFEGRSILVQRRSSFGQWVTVEKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRT*
Ga0134123_136100402	3300010403	Terrestrial Soil	SYAGRHINLQRHSQFGQWVTEGRMKLGPLGGRIFKIPQRPGTSYYRVYITTNQAGLGYLEAWSNTVRVTVKR*
Ga0138112_10207013	3300010905	Grasslands Soil	SARITSTKSFARHFIYLQRRSSFGQWVTVEKLRLGPLSGRLFTAPHRKGTTTYRVFMTTNQAGLGYLATWSNSVRVRYRH*
Ga0105246_124993182	3300011119	Miscanthus Rhizosphere	ITPSIYTTYNVKWKTASSQTVTVQVRPKLTLTRSSKWRFFAKVTATPSFAGRSIYFQKHSQFGQWVTVSKLKLGPLSGRIFNVPHQKGTTYYRVYMTTNQAGLGYLETWSNSARVHFSV*
Ga0150985_1041640512	3300012212	Avena Fatua Rhizosphere	GRTMYVQRRSKFGQWVTVQKLKLGPNSGRIFKAPHLKGTSTYRVYITTNQAGTGYLDAWSNSVRVHYRR*
Ga0150985_1051332091	3300012212	Avena Fatua Rhizosphere	TMYVQRRSKFGQWVTVQKLKLGPNSGRIFTAPHVKGTSTYRVYITTNQAGTGYLDAWSNSVRVHYRR*
Ga0150985_1221952921	3300012212	Avena Fatua Rhizosphere	RTSATRLFAKFSATPSFAGHTMYLQRQSKFGQWVTVLKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLETWSNSVRVRYRH*
Ga0137368_106939041	3300012358	Vadose Zone Soil	LSRTTSTRLYAKLAGTRSFAGRSILLQRRSSFGQWVTVLKLKLGPLSGRIFKAPHRKGTFTYRVYMTTNQAGAGYLDTWSNSVRVRYRR*
Ga0137375_111007161	3300012360	Vadose Zone Soil	AAPPSYTSYSAKWKTVTSQTVTVQVRPRLTLARTSSRRLFAKVNAATSHAGRFIYLQRHSAFGQWVTVGKLKLGPLSGRYFNIQHRKGTFVYRVYITTNQAGTGYLESWSNAVKVRFRR*
Ga0134034_11809241	3300012375	Grasslands Soil	PHVTLTRTGSTRLFAKIASTPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0134032_11089512	3300012376	Grasslands Soil	TSQTVTVQVRPHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0134058_12027651	3300012379	Grasslands Soil	RLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0134038_10604043	3300012382	Grasslands Soil	LTVQVRPHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVDKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0134046_11294482	3300012386	Grasslands Soil	TNYSATWKGAASQKVTVQVRPHLTLSRTSRTRLSARITSTKSFARHFIYLQRRSSFGQWVTVEKLRLGPLSGRLFTAPHRKGTTTYRVFMTTNQAGLGYLATWSNSVRVRYRH*
Ga0134057_10539853	3300012396	Grasslands Soil	PHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0134056_10313551	3300012397	Grasslands Soil	QVRPRLTLTKTGSTRLFARASATSSFAGRSIYLQRRSSFGQWVTVEKLKLGPNSGRIFKAPHRKGTFTYRVYITTNQAGTGYLDAWSNSVRVRYRR*
Ga0134048_10244862	3300012400	Grasslands Soil	GRTMYLQRRSKFGQWVTVQKLKLGPNSGRIFTAPHVKGTSTYRAYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0134048_11427071	3300012400	Grasslands Soil	QKVTVQVRPHLTLSRTSRTRLSARITSTKSFARHFIYLQRRSSFGQWVTVEKLRLGPLSGRLFTAPHRKGTTTYRVFMTTNQAGLGYLATWSNSVRVRYRH*
Ga0134049_10066222	3300012403	Grasslands Soil	ATSQTVTVQVRPHVTLTRTGSTRLFAKIAATSSFAGRSIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0134060_14876572	3300012410	Grasslands Soil	VRPHVTLTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR*
Ga0150984_1031647762	3300012469	Avena Fatua Rhizosphere	FAGRTMYLQRRSKFGQWVTVQKLKLGPNSGRIFTAPHVKGTSTYRAYMTTNQAGTGYLETWSNSVRVHYRR*
Ga0150984_1031700722	3300012469	Avena Fatua Rhizosphere	FAGRTMYVQRRSKFGQWVTVQKLKLGPNSGRIFTAPHVKGTSTYRAYMTTNQAGTGYLETWSNSVQVRYRR*
Ga0150984_1057877181	3300012469	Avena Fatua Rhizosphere	IYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNSVRVRYRR*
Ga0150984_1063023102	3300012469	Avena Fatua Rhizosphere	KTVTSQTVTVQVRPKVTLSRTSSTRLFAKFSASASFAGRTMYVQRRSKFGQWVTVQKLKLGPNSGRIFKAPHLKGTSTYRVYITTNQAGTGYLDAWSNSVRVHYRR*
Ga0150984_1102226182	3300012469	Avena Fatua Rhizosphere	VRPKVTLTRTSSTRLFAKFSATPSFAGRTMYLQRRSKFGQWVTVERLKLGPNSGRIFTAPHVKGTSTYRVYITTNQAGTGYLDSGSNSVRVRYRR*
Ga0150984_1222951622	3300012469	Avena Fatua Rhizosphere	MLTSYSVRWKAVTSQTVTVQVRPKVTLTRTSSTRLFAKFSASASLAGRTMYVQRRSKFGQWVTVQKLKLGPNSGRIFKAPHVKGTSTYRVYITTNQAGTGYLDSWSNSVRVHYRR*
Ga0137373_111691531	3300012532	Vadose Zone Soil	KLTLSRTTSTRLYAKLAGTRSFAGRSILLQRRSSFGQWVTVLKLKLGPLSGRIFKAPHRKGTFTYRVYMTTNQAGAGYLDTWSNSVRVRYRR*
Ga0164301_109340481	3300012960	Soil	SFTYVITPSIYTTYNVKWKTATSQTVTVQVRPKLTLTRSSKWRFYAKVTATPSFAGRSIYFQKHSQFGQWVTVSKLKLGPLGGRIFNVPHQKGTTYYRVYMTTNQAGLGYLEAWSNTARVTVKR*
Ga0134076_105988501	3300012976	Grasslands Soil	VTVQVRPHLTLSRTSRTRLSARITSTKSFARHFIYLQRRSSFGQWVTVEKLRLGPLSGRLFTAPHRKGTTTYRVFMTTNQAGLGYLATWSNSVRVRYRH*
Ga0163162_124709272	3300013306	Switchgrass Rhizosphere	KSASSQAVVVQVRPKLTLNRMSATRLFAKITASHPFEGRSILVQRRSSFGQWVTVQKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGAGYLDTWSNSVKVRYRR*
Ga0120158_100096121	3300013772	Permafrost	AHTSATRLFARVTATPSFASHSIYLQRRSQFGQWVTVEKLKLGPLSGRSFKVPHRKGRFTYRVYMTTNQAGAGYLDTWSNSVSVRYRR*
Ga0120171_11036051	3300014827	Permafrost	VTATPSFAGHSIYLQRRSQFGQWVTVEKLKLGQLSGRSFKVPHRKGRFTYRVYMTTNQAGAGYLDTWSNSVSVRYRR*
Ga0132258_114362083	3300015371	Arabidopsis Rhizosphere	GTVSSQKANEQVLILAQPYGSSAQQIATLETGTGGAFYYTTAPTMFTQYSVRWKSVTSQTVTVQVRPKLTLSRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFKAPHLKGTSTYRVYMTTNQAGTGYLETSSNLVRVRYRR*
Ga0132257_1009256432	3300015373	Arabidopsis Rhizosphere	AATPSFAGRTIYLQRRSKFGQRVTVEKLKLGPNSGRIFKAPHLKGTSTYRVYMTTNQAGTGYLETSSNLVRVRYRR*
Ga0132255_1038768722	3300015374	Arabidopsis Rhizosphere	AKIAATPSLAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRAYMTTNQAGTGYLETWSNSVRVRYRH*
Ga0184619_104507152	3300018061	Groundwater Sediment	SFAGRSIYLQRRSSFGQWVTVVKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVRVRYRR
Ga0184635_100226021	3300018072	Groundwater Sediment	FVYTTNPSVLTVYSVKWKTATSQPVTVQVRPKLTLNRMTATRLYAKITASHPFAGRSIHLQRRSSFGQWVTVQKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRH
Ga0184641_11461701	3300019254	Groundwater Sediment	TLQRTSATRLFAKVAATKSFARHFIYLQRRSSFGQWVTVQKLRLGPNSGKIFTAPHKKGTFTYRVYMTTNQAGTGYLETWSNSVRVRYRR
Ga0184646_12598001	3300019259	Groundwater Sediment	YEGRFIYLQRRSSFGQWVTVDKLKLGPNSGRIFKLPHRKGTFSYRVYMTTNQAGTGYLESWSNAVKVRFRR
Ga0184642_15880912	3300019279	Groundwater Sediment	SRTSTRFIARVSAPRSYADRFIYLQRRSSFGQWITVDKLKLGPNSGRIFKLPHRKGTFSYRVYMTTNQAGTGYLESWSNAVKVRFRR
Ga0173479_105760332	3300019362	Soil	YTAKWKAASSQTVTVQVRPKMTLSRTTATRLYARLGGSHTFANHFIYLQRRSSFGQWVTVQKLRLGPNSGRIFTAPHKKGTFTYRVYMTTNQAGTGYLETWSNSVRVRYRH
Ga0210378_103760682	3300021073	Groundwater Sediment	KTATSQPATVQVRPKLTLARTTATRLFAKLIGARSFAGRSIYLQRRSSFGQWVTVLKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVRVRYRR
Ga0222625_12226411	3300022195	Groundwater Sediment	NRFMYLQRRSSFGQWVTVEKLRLGPNSGKIFTAPHKKGTFTYRVYMTTNQAGTGYLETWSNSVRVRYRR
Ga0207692_110966561	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TRLFAKFAASASFAGRTMYLQRRSQFGQWVTVQKLKLGPNSGRIFTAPHVKGTSTYRAYMTTNQAGTGYLETWSNSVRVHYRR
Ga0207650_115022391	3300025925	Switchgrass Rhizosphere	TVTVQVRPKLTLTRTSRTRLFAKITATPSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNTVRVRYRR
Ga0207700_105140962	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SVRWKTATSQTVTVQVRPSITLTRTGKTRLFTRVKATPSFAGRTVYVQRLSGFGQWVTVEKLKLGPNSGRIFTAPHRKGTSTYRIYMTTNQAGTGYLATSSNSVRVHYRQ
Ga0207686_107682181	3300025934	Miscanthus Rhizosphere	YVTSPTIFTAYSVRWKNTASQSVAVQVRPRLTLTRTSATRLFAKISATPSFAGRSILLQRPSKFGQWVTVEKLKLGPNSGRIFTAPHKKGTTTYRVFITTNQAGTGYLTTSSNTVRVRYR
Ga0207709_111376931	3300025935	Miscanthus Rhizosphere	SSAKANESVTVMAQPFGSSTQQVATLVTGAGGAFTYTSTPTALTYYSVKWKTASSQAVIVQVRPKLTLNRMSATRLFAKITASHPFEGRSILVQRRSSFGQWVTVEKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVKVRYRR
Ga0209153_12582971	3300026312	Soil	LTRTSSTRLFAKIAATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDSGSNSVRVRYRR
Ga0209811_100222411	3300027821	Surface Soil	VATPSFAGRTIYLQRRSKFGQWVTVQKLKLGPNSGRIFKAPHVKGTFTYRVYITTNQAGTGYLDSGSNSVLVHFRR
Ga0307291_10213031	3300028707	Soil	VQVRPKLTLTRTSRTRLFAKIAATTSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNSVRVRYRR
Ga0307323_102526381	3300028787	Soil	WRFYARATATSSLAGRKIYFQRHSQFGQWVTLSSLKLGPLSGRIFKVPHVKGTVYYRVYMTTNQAGLGYLETWSSSSRVHFNK
Ga0308203_10076681	3300030829	Soil	QVRPKLTLTRTSRTRLFAKIAATTSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNSVRVRYRR
Ga0308205_10012503	3300030830	Soil	SGKPNEAVLVLSQPYGSSAQQVATLMTGAGGAFSYVTTPTILTVYSVRWKNTASQSVAVQVRPKLTLTRTSATRLFAKISATPSFAGRSILLQRPSKFGQWVTVEKLKLGPNSGRIFTAPHKKGTTTYRVFITTNQAGTGYLTTSSNSVRVRYRR
Ga0308205_10167831	3300030830	Soil	AGRSIYLQRRSQFGQWVTVEKLKLGPNSGRYFKAPHRKGRFTYRVYITTNQAGAGYLDSWSNTVKVRFRR
Ga0308205_10323261	3300030830	Soil	LTLARTTATRLFAKLIGARSFAGRSIYLQRRSSFGQWVTVLKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVRVRYRH
Ga0308206_11168271	3300030903	Soil	PKLTLTRTTSTRLFAKIAAAPSFPGRTIYLQRRSKFGQWVTVERFKLGPNSGRIFKAPHVKGTSTYRVYMTTNQAGTGYLETWSNTVRVLYRR
Ga0102760_107344761	3300031039	Soil	KTTTSQTVTVQVRPKLTLAKTSTRFIAKVSAPRSYAGRFIYLQRRSSFGQWVTVVKLKLGPNSGRIFKVPHLKGTFNYRVYMTTNQAGTGYLESSSNSVKVRFRR
Ga0102746_109192501	3300031054	Soil	RPKMTLQRTSATRLFAKVSATPSFAKRFFYLQRRSSFGQWVTVEKLRLGPNSGRIFTAPHRKGTFTYRVYMTTNQAGTGYLESWSNTVRVRYRR
Ga0308189_102137382	3300031058	Soil	VRPKVTLTRTSATRLFAKFTATPSFARRTMYLQRQSKFGQWVTVEKLKLGPNSGRIFTAPHLKGTFTYRVYMTTNQAGTGYLDTWSNTVRVRYRH
Ga0308201_100200623	3300031091	Soil	RPKLTLTRTSRTRLFAKIAATTSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNSVRVRYRR
Ga0308201_100236041	3300031091	Soil	QTVTVQVRPKVTLQRLSATRLFAKVGATTSFANRFMYLQRRSSFGQWVTVEKLRLGPNSGKIFTAPHKKGTFTYRVYMTTNQAGTGYLETWSNSVRVRYRR
Ga0308201_100340971	3300031091	Soil	LTLSRTSATRLSAKLTGTHSFAGRFIYLQRRSSFGQWVTVLKLRLGPLSGRLFTAPHRKGTFTYRVYMTTNQAGSGYLDTWSNSVRVRYRH
Ga0308197_101812521	3300031093	Soil	TSQTVTLQVRPRLTLAHTTATRLFARVTATPSFAGRSIYLQRRSQFGQWVTVSKLKLGPNSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVRVRYRR
Ga0308199_11433482	3300031094	Soil	LTLTRTSRTRLFAKIAATTSFAGRSIYLQHRSKFGQWVTVEKLKLGPNSGRIFTAPHVKGTTTYRVYMTTNQAGTGYLDTGSNSVRVRYRR
Ga0308187_103581182	3300031114	Soil	WKTATSQTVTVQVRPKVTLQRLSATRLFAKLGATTSFANRYFYLQRRSSFGQWVTVVKLRLGPNSGRIFTAPHKKGTFTYRAYMTTNQAGTGYLETWSNSVRVRYRR
Ga0370548_132426_1_270	3300034644	Soil	LNRTTATRLFAKITATPSFAGRTIYLQRRSKFGQWVTVEKLKLGPLSGRIFKAPHRKGTFTYRVYMTTNQAGAGYLDSWSNSVRIRFRH
Ga0370546_037721_394_708	3300034681	Soil	ATSQSATVQVRPKLTLARTTATRLFAKILGTRSFAGRSIYVQRRSSFGQWVTVEKLKLGPLSGRIFKAPHKKGTFTYRVYMTTNQAGSGYLDTWSNSVRVRYRR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073165

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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