Metagenome / Metatranscriptome Family F073168

Basic Information
Family ID	F073168
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	44 residues
Representative Sequence	MKKPYQIEAQRAVKQLEAMAADGNPAVQMMLPMAEMVGWLRKG
Number of Associated Samples	103
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.50 %
% of genes near scaffold ends (potentially truncated)	83.33 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (90.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (9.167 % of family members)
Environment Ontology (ENVO)	Unclassified (20.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.11% β-sheet: 0.00% Coil/Unstructured: 47.89%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00872	Transposase_mut	4.17
PF03050	DDE_Tnp_IS66	1.67
PF02371	Transposase_20	1.67
PF13360	PQQ_2	1.67
PF00756	Esterase	0.83
PF04255	DUF433	0.83
PF04471	Mrr_cat	0.83
PF00196	GerE	0.83
PF13418	Kelch_4	0.83
PF05593	RHS_repeat	0.83
PF08264	Anticodon_1	0.83
PF02679	ComA	0.83
PF14417	MEDS	0.83
PF00078	RVT_1	0.83
PF05598	DUF772	0.83
PF00903	Glyoxalase	0.83
PF01041	DegT_DnrJ_EryC1	0.83
PF00080	Sod_Cu	0.83
PF15919	HicB_lk_antitox	0.83
PF14659	Phage_int_SAM_3	0.83
PF13545	HTH_Crp_2	0.83
PF06296	RelE	0.83
PF13565	HTH_32	0.83
PF07007	LprI	0.83
PF13620	CarboxypepD_reg	0.83
PF01609	DDE_Tnp_1	0.83
PF13177	DNA_pol3_delta2	0.83
PF01029	NusB	0.83
PF01477	PLAT	0.83
PF13401	AAA_22	0.83
PF00589	Phage_integrase	0.83
PF03069	FmdA_AmdA	0.83
PF08706	D5_N	0.83
PF13614	AAA_31	0.83
PF12543	DUF3738	0.83
PF13546	DDE_5	0.83
PF02796	HTH_7	0.83
PF03070	TENA_THI-4	0.83
PF13358	DDE_3	0.83
PF04679	DNA_ligase_A_C	0.83
PF01610	DDE_Tnp_ISL3	0.83
PF07638	Sigma70_ECF	0.83
PF13683	rve_3	0.83
PF13442	Cytochrome_CBB3	0.83
PF00884	Sulfatase	0.83
PF13378	MR_MLE_C	0.83
PF07366	SnoaL	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	4.17
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.67
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.67
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.83
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.83
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.83
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.83
COG1809	Phosphosulfolactate synthase, CoM biosynthesis protein A	Coenzyme transport and metabolism [H]	0.83
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.83
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.83
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.83
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.83
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.83
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.83
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.83
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.83
COG4737	Uncharacterized conserved protein	Function unknown [S]	0.83
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.83
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.83
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.83 %
Unclassified	root	N/A	10.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.17 %
Unclassified	root	N/A	10.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.00 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	6.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.00 %
Acidiferrobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.83 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	5.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.00 %
Acidiferrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae	0.83 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.83 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.00 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	3.33 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	2.50 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.67 %
Lacipirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae	0.83 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.83 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.83 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.83 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.83 %
Acidiferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.00 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	3.33 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.50 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.67 %
Microcoleaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae	0.83 %
Bythopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula	0.83 %
Acidiferrobacter thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans	0.83 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.83 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.83 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.00 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	2.50 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.50 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.83 %
Bythopirellula goksoeyrii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula → Bythopirellula goksoeyrii	0.83 %
Microcoleus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus	0.83 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.83 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.83 %
Acidiferrobacter thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans	0.83 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.83 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.00 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	2.50 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.50 %
Arthrobacter sp. ES1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ES1	0.83 %
unclassified Microcoleus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus	0.83 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.83 %
Bythopirellula goksoeyrii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula → Bythopirellula goksoeyrii	0.83 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.83 %
Acidiferrobacter thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans	0.83 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.83 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.00 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	2.50 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.50 %
Microcoleus sp. FACHB-SPT15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus → Microcoleus sp. FACHB-SPT15	0.83 %
Arthrobacter sp. ES1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ES1	0.83 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.83 %
Bythopirellula goksoeyrii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula → Bythopirellula goksoeyrii	0.83 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.83 %
Acidiferrobacter thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans	0.83 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.83 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100495644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1129	Open in IMG/M
3300001305\|C688J14111_10307840	Not Available	503	Open in IMG/M
3300005181\|Ga0066678_10738855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	654	Open in IMG/M
3300005338\|Ga0068868_102333399	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005451\|Ga0066681_10979718	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005539\|Ga0068853_100050538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3577	Open in IMG/M
3300005546\|Ga0070696_101140959	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300005547\|Ga0070693_101580806	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300005554\|Ga0066661_10461594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300005560\|Ga0066670_10188475	All Organisms → cellular organisms → Bacteria → Acidobacteria	1232	Open in IMG/M
3300005587\|Ga0066654_10923114	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300005650\|Ga0075038_10037858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	869	Open in IMG/M
3300006028\|Ga0070717_10022241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5008	Open in IMG/M
3300006052\|Ga0075029_100161761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1381	Open in IMG/M
3300006102\|Ga0075015_100076688	All Organisms → cellular organisms → Bacteria → Acidobacteria	1638	Open in IMG/M
3300006893\|Ga0073928_10097314	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300006893\|Ga0073928_10608129	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300006893\|Ga0073928_11014613	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300009053\|Ga0105095_10615131	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300009089\|Ga0099828_11426648	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300009098\|Ga0105245_13196220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus → Microcoleus sp. FACHB-SPT15	508	Open in IMG/M
3300009156\|Ga0111538_10409228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1718	Open in IMG/M
3300009156\|Ga0111538_13240541	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300010045\|Ga0126311_11316179	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300010361\|Ga0126378_10645473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300010361\|Ga0126378_12243469	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300010376\|Ga0126381_102061990	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300010376\|Ga0126381_103283630	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300010398\|Ga0126383_10214004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1862	Open in IMG/M
3300010398\|Ga0126383_10924724	Not Available	959	Open in IMG/M
3300010401\|Ga0134121_11981361	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300012209\|Ga0137379_11512266	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300012353\|Ga0137367_11154001	Not Available	520	Open in IMG/M
3300012358\|Ga0137368_10543341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	744	Open in IMG/M
3300012532\|Ga0137373_10876708	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300012904\|Ga0157282_10231127	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300012917\|Ga0137395_10022850	All Organisms → cellular organisms → Bacteria → Proteobacteria	3671	Open in IMG/M
3300012917\|Ga0137395_10808064	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012929\|Ga0137404_11967569	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012960\|Ga0164301_11134709	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012960\|Ga0164301_11657471	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300013088\|Ga0163200_1101726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	875	Open in IMG/M
3300013307\|Ga0157372_11707050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	724	Open in IMG/M
3300014159\|Ga0181530_10013058	All Organisms → cellular organisms → Bacteria → Acidobacteria	6976	Open in IMG/M
3300014499\|Ga0182012_10110947	All Organisms → cellular organisms → Bacteria → Acidobacteria	2040	Open in IMG/M
3300014501\|Ga0182024_10004627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	31461	Open in IMG/M
3300014501\|Ga0182024_10369484	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300014501\|Ga0182024_10962415	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300014657\|Ga0181522_10056450	All Organisms → cellular organisms → Bacteria	2217	Open in IMG/M
3300015051\|Ga0137414_1165011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1788	Open in IMG/M
3300015360\|Ga0163144_11206030	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300015374\|Ga0132255_104976193	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300016700\|Ga0181513_1138764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	673	Open in IMG/M
3300016730\|Ga0181515_1147672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	583	Open in IMG/M
3300017823\|Ga0187818_10543908	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300017938\|Ga0187854_10202820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300017947\|Ga0187785_10626418	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300017966\|Ga0187776_10463060	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300017970\|Ga0187783_10919751	Not Available	630	Open in IMG/M
3300017972\|Ga0187781_10480446	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300018022\|Ga0187864_10473115	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300018025\|Ga0187885_10113281	Not Available	1308	Open in IMG/M
3300018026\|Ga0187857_10333245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans	689	Open in IMG/M
3300018033\|Ga0187867_10493213	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300018468\|Ga0066662_11240187	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300018482\|Ga0066669_10513698	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300019788\|Ga0182028_1289934	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300021388\|Ga0213875_10150576	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300021388\|Ga0213875_10415331	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300021420\|Ga0210394_11745585	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300021560\|Ga0126371_12636675	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300025912\|Ga0207707_11442757	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300025920\|Ga0207649_10444490	Not Available	977	Open in IMG/M
3300025936\|Ga0207670_11636552	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300025944\|Ga0207661_10641549	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300025960\|Ga0207651_11048994	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300025961\|Ga0207712_11249763	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300026324\|Ga0209470_1335276	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300026326\|Ga0209801_1273613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300026489\|Ga0257160_1036321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	827	Open in IMG/M
3300027039\|Ga0207855_1005152	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300027388\|Ga0208995_1082537	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300027575\|Ga0209525_1122835	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300027766\|Ga0209796_10061322	All Organisms → cellular organisms → Bacteria → Acidobacteria	1136	Open in IMG/M
3300027775\|Ga0209177_10332686	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300027846\|Ga0209180_10475727	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300027854\|Ga0209517_10085327	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300027854\|Ga0209517_10257332	Not Available	1041	Open in IMG/M
3300027894\|Ga0209068_10750457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ES1	573	Open in IMG/M
3300027911\|Ga0209698_11245559	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300028798\|Ga0302222_10013721	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300029882\|Ga0311368_10496928	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300029894\|Ga0247028_1068851	Not Available	756	Open in IMG/M
3300029944\|Ga0311352_10339883	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300029944\|Ga0311352_10982683	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300029951\|Ga0311371_10308960	All Organisms → cellular organisms → Bacteria → Acidobacteria	2223	Open in IMG/M
3300029999\|Ga0311339_10036384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	6898	Open in IMG/M
3300029999\|Ga0311339_11953282	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300030007\|Ga0311338_10006244	All Organisms → cellular organisms → Bacteria → Acidobacteria	18311	Open in IMG/M
3300030606\|Ga0299906_10973220	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300031057\|Ga0170834_100294408	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031236\|Ga0302324_101697694	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300031236\|Ga0302324_102613552	Not Available	613	Open in IMG/M
3300031469\|Ga0170819_13497097	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031474\|Ga0170818_109485605	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300031521\|Ga0311364_11864371	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300031525\|Ga0302326_10099443	All Organisms → cellular organisms → Bacteria	5218	Open in IMG/M
3300031576\|Ga0247727_10580053	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula → Bythopirellula goksoeyrii	848	Open in IMG/M
3300031708\|Ga0310686_109323408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1688	Open in IMG/M
3300031708\|Ga0310686_119392144	Not Available	544	Open in IMG/M
3300031718\|Ga0307474_10144109	Not Available	1795	Open in IMG/M
3300032205\|Ga0307472_100477417	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300032782\|Ga0335082_10297823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1486	Open in IMG/M
3300032783\|Ga0335079_12284290	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300032805\|Ga0335078_11442889	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300032805\|Ga0335078_12460480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300032892\|Ga0335081_10253568	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300032954\|Ga0335083_11396307	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300033134\|Ga0335073_10364942	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300033179\|Ga0307507_10705130	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.33%
Host-Associated	Host-Associated	11.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.83%
Aquatic	Environmental → Aquatic	17.50%
Plants	Host-Associated → Plants	11.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Freshwater	Environmental → Aquatic → Freshwater	11.67%
Peat	Environmental → Terrestrial → Peat	10.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%
Sediment	Environmental → Aquatic → Sediment	3.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%
Roots	Host-Associated → Plants → Roots	2.50%
Cave	Environmental → Terrestrial → Cave	0.83%
Phylloplane	Host-Associated → Plants → Phylloplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.50%
Lake	Environmental → Aquatic → Freshwater → Lake	1.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Ice	Environmental → Aquatic → Freshwater → Ice	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.33%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.83%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.83%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.83%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.83%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013088	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029894	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-A1b	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073168

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1004956443	3300000559	Soil	MKKPYQIEAQRAVKQLEAMATDGNPAVQMVLPMAEMVGWL
C688J14111_103078402	3300001305	Soil	MKKPYQIESQRAVKRLEEMVADGNPAVQMVLPMAEMVGGCAKGWEN*
Ga0066678_107388552	3300005181	Soil	MKKPYQIESQRAVKQLEAMAADGNPAVQMVLPMAEMVGWLRKGVGELIR*
Ga0068868_1023333991	3300005338	Miscanthus Rhizosphere	MRKPYQIEAQRAVKQFEAMAADGNPAVQMMLPVAEMVGWLRKGVG
Ga0066681_109797183	3300005451	Soil	MKKPYQIEAQRAVKQLEEMATDGNAAVQLVLPIAEMVGWL
Ga0068853_1000505381	3300005539	Corn Rhizosphere	MRKPYQIESQRAVKRLEEMVADGNPAVQMVLPMAEMVGWLREGVGELIRRAG
Ga0070696_1011409592	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKKPYQIESQRAVKQLEAMAADGNPAVQMVLPLAEMVGWLRKGVGEL
Ga0070693_1015808062	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKKPYQIEAQRAVRQLEEMAANGNPAVQMVLPMAEMVGWLRQGVGAL
Ga0066661_104615941	3300005554	Soil	MKKPYQIEAQRAVKRLEEMAGEGNPAVQMVLPMAEMVGWLRKGVGELVRQAGL
Ga0066670_101884751	3300005560	Soil	MKKPYQIESQRAVKRLEGMAAEGNPAVQMILPMAEMVGWLRQGVG
Ga0066654_109231141	3300005587	Soil	MKKPYQIESQRAVKQFEEMAADGNPAVQMLLPMAEMVGWLRKGVGELIR
Ga0075038_100378582	3300005650	Permafrost Soil	MKKPYQIEAQRAVKQLEAMAAGGNPAVQMVLPMAEMVGWLRKGVGELIRQAG
Ga0070717_100222416	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKKPYQIEAQRAVNRLEEMAAEGNPAVQMVLPMAEMVGWLR
Ga0075029_1001617613	3300006052	Watersheds	MKKPYQIAAQRAVKQLEAMAGDGNPAVQMVLPMAEMMSWLRKGVGELIRQAG
Ga0075015_1000766881	3300006102	Watersheds	MKKPYQIEAQRAVKQLEAMAADDGNPAVQMVLPMAE
Ga0073928_100973141	3300006893	Iron-Sulfur Acid Spring	MKKPYQIETQRAVNRLEEMAAEGNPAVQMVLPMAEMVGWLRKGVGELVR
Ga0073928_106081292	3300006893	Iron-Sulfur Acid Spring	MKKPYQIESQRAVKRLEEMVAEGNPTVQMMLPLAEMVG*
Ga0073928_110146132	3300006893	Iron-Sulfur Acid Spring	MKKPYQIESQRAVKELEAMAADGNPAVQMLLPMAEMVGWLR*
Ga0105095_106151311	3300009053	Freshwater Sediment	MKKSYQIEAQRAVRQLEAMAAEGNPAVQMVLPMAEMVGWLREGVGAL
Ga0099828_114266481	3300009089	Vadose Zone Soil	MKKPYQIESQRAVKRLEEMAAEGNPAVQLVLPMAEMVGWLREG
Ga0105245_131962202	3300009098	Miscanthus Rhizosphere	MNKPYQIEAQRAVKQFEAMATAGNPAVQMMLPLAEMV
Ga0111538_104092281	3300009156	Populus Rhizosphere	MKKPYQIESQRAVKQLERMAAEGNPAVQMVLPLAEMVGWLRKGVGD*
Ga0111538_132405411	3300009156	Populus Rhizosphere	MKKPYQIESQRAVKQLEQMAEDGNPAVQMVLPMAEMIGWLRQGVAN*
Ga0126311_113161792	3300010045	Serpentine Soil	MKKPYQIEAQRAVKQFEAMAAEGNPAVQMMLPMAEMVVWLRKGVG
Ga0126378_106454733	3300010361	Tropical Forest Soil	MKKPYQIEAQRAIKQLDAMAAEGSLAVQMVLPMAEMMGWLR
Ga0126378_122434691	3300010361	Tropical Forest Soil	MKKPSQIEAQRAVRQLEEMAADENPAVQMVLPMAEMVGWLRQ
Ga0126381_1020619901	3300010376	Tropical Forest Soil	MKKPYQIEAQRAVKQLEAIANDGNPAVQMVLPMAEMV
Ga0126381_1032836301	3300010376	Tropical Forest Soil	MKKTYQIDAQRAVKQFEAMAAEGNPAVQMMLPMAEMVGWLRK
Ga0126383_102140041	3300010398	Tropical Forest Soil	MKKPYQIESLRAVKQFEAMAAAGNPAVQMMLPMAEMV
Ga0126383_109247242	3300010398	Tropical Forest Soil	MKKPYQIEAQRAVKQLEAMANDGNPAVQMMLPMAEMV
Ga0134121_119813612	3300010401	Terrestrial Soil	MKKPYQIESQRAVKQLEMMAADGNPAVQMVLPLAEMVGWLRK
Ga0137379_115122661	3300012209	Vadose Zone Soil	MKKPYQIEAQRAVKQLEAMATDGNPAVQMMLPMAEMMGWLRKGVGEL
Ga0137367_111540012	3300012353	Vadose Zone Soil	MKKPYQIESQHAVKRLERMAAEGNPAVQMILPMTEM
Ga0137368_105433411	3300012358	Vadose Zone Soil	MKKPYQIESQRAVKQLAEMAADGNPSVQMVLPLAEMVGWLRKGVGELIRQ
Ga0137373_108767081	3300012532	Vadose Zone Soil	MKKPYQIEAQRAVRQLEEMATDGNPAVQMVLPMAEMVGWLRQGVGALIRQA
Ga0157282_102311272	3300012904	Soil	MKKPYQIEAQRAVKQLEAMATDGNPAVQMMLPMAEMVSWLRKGVGELVRQAG
Ga0137395_100228505	3300012917	Vadose Zone Soil	MKKPYQIESQRAVKRLEEMAAEGNPAVQLVLPMAEMVGWLRQAWEN*
Ga0137395_108080641	3300012917	Vadose Zone Soil	MKKPYQIESQRAVRRLEEMAADGNPAVQMVLPLAEM
Ga0137404_119675692	3300012929	Vadose Zone Soil	MKKPYQIEAQRAVKRLEEMAADGNPAVQMMLPMAEMVGWLRKGVGELIRQAG
Ga0164301_111347091	3300012960	Soil	MNKPYQIDAQRAVRQFEAMAAEGNPAVQMVLPMAET
Ga0164301_116574711	3300012960	Soil	MKKPYQIESQRAVKQLEAMAAKGNPAVQMVLPMAEMVGWLRKGVGELIRQA
Ga0163200_11017261	3300013088	Freshwater	MKKPYQIEAQRAVKQLEEMAADGNPAVQMMLLMAEMLGGCIRA*
Ga0157372_117070501	3300013307	Corn Rhizosphere	MKKPYQIEAQRAIKQLDAMAANGDPAVQMMLPMAEMVGWLRKGVGELIR
Ga0181530_100130584	3300014159	Bog	MKKPYHIEAQRAVKQLEAMAAEGNPAVQMVLPMAEMVGWLRKGVGEL
Ga0182012_101109473	3300014499	Bog	MKKPYQIESQRAVKQLAEMAADGNPAVQMMLPLAEMIGWLRKVSEN*
Ga0182024_100046272	3300014501	Permafrost	MKKPYQIESQRAVKQFEAMAADGNPAVQMVLPMAEMVGWLRKGVGVLHGL*
Ga0182024_103694841	3300014501	Permafrost	MKKPYQIESQRAVKELEAMAADGNPAVQMVLPMAEM
Ga0182024_109624152	3300014501	Permafrost	MKKPYQIEAQRAIKQLDAMAADGNPAVQMMLPLAEMVGWLRKGV
Ga0181522_100564501	3300014657	Bog	MKKPYQIEAQRAVKQLEGMAAEGNPAVQMVLPMAEMVGWLRKGVGE
Ga0137414_11650114	3300015051	Vadose Zone Soil	MKKPYQIESLRAVKRLEEMAADGNPAVQMMLPMAEMIGWLHEGVGN*
Ga0163144_112060301	3300015360	Freshwater Microbial Mat	MKKPYQIESQRAVKRLEELAGEGRSVQMELPLAEMVGWLRQGVGE
Ga0132255_1049761931	3300015374	Arabidopsis Rhizosphere	MKKPYQIEAQRAVKQLEAMAADGNPAVQMMLPMAEMVGWLRKG
Ga0181513_11387641	3300016700	Peatland	MKKPYQIEAQRAVKQLAEMSADGNLAVQMVLPMAEMI
Ga0181515_11476721	3300016730	Peatland	MKKPYQKESQRAVQQFDAMAAEGNPAVQMVPPMAEMVGLVA
Ga0187818_105439081	3300017823	Freshwater Sediment	MKKPYQIEAQRAVKRFEAMAAEGNPAVQMMLPMAEMVGWLR
Ga0187854_102028201	3300017938	Peatland	MKKPYQIEAQRAVRQLEEMAADGNPAVQMVLPMAE
Ga0187785_106264181	3300017947	Tropical Peatland	MKKPYQIESQRAVKQFAEMAADGNPSVQMVLPLAARG
Ga0187776_104630601	3300017966	Tropical Peatland	MKKPYQIEAQRAVKQFEAMAADGNPAVHMVLPLAEMVGWLRKGVGE
Ga0187783_109197511	3300017970	Tropical Peatland	MKKPYQIESQRAVKRLERMAAEGNPAVQLVLPLAETLGWLRRVWVSFKRA
Ga0187781_104804461	3300017972	Tropical Peatland	MQKPYRIESQRAVRRLERMAAEGNRAVQLVLPLAETLGWLRWGG
Ga0187864_104731152	3300018022	Peatland	MKKPYQIEAQRAVRQFEAMAADGNPAVQMVLPMAEMVGWLRKGVGELIRQA
Ga0187885_101132811	3300018025	Peatland	MKKPYQIEAQRAVRQLEEMAADGNPAVQMVLPMAEMVGWLHKGVGELIR
Ga0187857_103332453	3300018026	Peatland	MKKPYQIEAQRAVKQFEAMAADGNPAVQMVLPMAEMIGWLRKGVGELIRQAG
Ga0187867_104932131	3300018033	Peatland	MKKPYQIEAQRAVKQLEAMAAEGNPAVQMVLPMAEMVGGLRK
Ga0066662_112401872	3300018468	Grasslands Soil	MKKPYQIDAERAVQQLEQMAADGNPAVQMMLPMAEMVGWL
Ga0066669_105136983	3300018482	Grasslands Soil	MKKPYQIETQRAVKQFEAMAAEGNPAVQMVLPMAEM
Ga0182028_12899342	3300019788	Fen	MKKPYQIEAQRAVKQFEAMAAEGYPAVQMVLPMAEMGGLVCGRAWAS
Ga0213875_101505763	3300021388	Plant Roots	MKKPYQIEAQRAVKQFEAMTADGNPAVQMVLPRAEMLAWLKAWAN
Ga0213875_104153312	3300021388	Plant Roots	MKKPYQIESQRAVKRVEGMAAEGNPVVQMVLPMAEMLGWLREGVGELVRQ
Ga0210394_117455851	3300021420	Soil	MKKPYQIESQRAVKRLEEMAADGNPAVQLVLPMAEALGWLKQGVGELIRQA
Ga0126371_126366752	3300021560	Tropical Forest Soil	MKKPYQIESQRAVKQLEAMAAEGSPAVQMVLPLAEMIGWL
Ga0207707_114427571	3300025912	Corn Rhizosphere	MKKPYQIEAQRAVKQFEAMAADGNPAVQMMLPVAEMV
Ga0207649_104444902	3300025920	Corn Rhizosphere	MRKPYQIESQRAVKRLEEMVADGNPAVQMVLPMAEMVGWLREGVGE
Ga0207670_116365522	3300025936	Switchgrass Rhizosphere	MKKPYQIESQRAVKQLEMMAADGNPAVQMVLPLAEMVGWL
Ga0207661_106415491	3300025944	Corn Rhizosphere	MKKPYQIQSQRAVKQLETMAADGNAAVQMVLPLAE
Ga0207651_110489942	3300025960	Switchgrass Rhizosphere	MRKPYQIEAQRAVKQFEAMAADGNPAVQMMLPVAEMVGWLRKG
Ga0207712_112497631	3300025961	Switchgrass Rhizosphere	MKKPYQIESQRAVKQLEAMAADGNPVVQMVLPLAEMVGWLRKGVGELICQA
Ga0209470_13352761	3300026324	Soil	MKKPYQIESQRAVKRLEEMVADGSPAVQMVLPMAEMVGWLREGVGELIRRAGL
Ga0209801_12736131	3300026326	Soil	MKKPYQIEAQRAVKELAEMAADGNPSVQMVLPMAEMIG
Ga0257160_10363211	3300026489	Soil	MKKPYQIEAQRAVKQLEAMAADGNPAVQMVLPMAEMMGWLR
Ga0207855_10051521	3300027039	Tropical Forest Soil	MKKPYQIQAQRAVNQLEGMAAEGNPAVQMVLPMAEL
Ga0208995_10825372	3300027388	Forest Soil	MKKPYQIEAQRAVKQFEAMAADGNPAVQMLLPMAEMVGWLRSVRGRKGKR
Ga0209525_11228351	3300027575	Forest Soil	MKKPYQIEAQRAIKQLDAMAADGNPAVQMMLPLAEMVGWLRKGVGELIRQA
Ga0209796_100613222	3300027766	Agave	MKKPYQIESQRAVKRLEEMVADGNPAVQMVLPMAEMVGWLREGVGELI
Ga0209177_103326862	3300027775	Agricultural Soil	MKKPYQIEAQRAVRQLEAMAADENPAVQMVLPMAEMVGWL
Ga0209180_104757272	3300027846	Vadose Zone Soil	MKKPYQIEAQRAVRQLEEMAADGNPAVQMVLPMAEMVGWLRQGVGA
Ga0209517_100853273	3300027854	Peatlands Soil	MKKTYQIEAQRAVKQFEAMAANGNPAVQLALPLAEAMGWLRKSVGELI
Ga0209517_102573323	3300027854	Peatlands Soil	MKKPYQIESQQAVKRLERMAAEGNPCVQLVLPMAETLG
Ga0209068_107504572	3300027894	Watersheds	MKKRYQIESSRAVKRMEEMAADGNPVVQIVLPMAEMIGLLHK
Ga0209698_112455591	3300027911	Watersheds	MKKPYQIESQRAVKQLAEMAADGNPAVQMMLPMAEMIGWLRKGV
Ga0302222_100137211	3300028798	Palsa	MKKPYQIESQRAVKELEAMAADGNPAVQMVLPMAE
Ga0311368_104969281	3300029882	Palsa	MRKPYQIETQRAVKQLEAMAADGDPAVQMVLPMAEMVGWLRKG
Ga0247028_10688511	3300029894	Cryconite	MKKTYQIESLRAVKRLEETAAAGNPSVQMLLLQVR
Ga0311352_103398831	3300029944	Palsa	MKKPYQIETQRAVKQLEAMAADGNPAVQMVLPMAEMVGWLRKGVGELIRQAG
Ga0311352_109826831	3300029944	Palsa	MKKPYQIGSQRAVKELEAMAADGNPAVQMALPMAEMVGW
Ga0311371_103089605	3300029951	Palsa	MKKPYQIESQRAVKELEAMAADGNPAVQMVLPMAEMVGWLR
Ga0311339_100363843	3300029999	Palsa	EKRRVAMKKPYQIEAQRAVKQLEGMAAEGNPAVQMVLPMADR
Ga0311339_119532822	3300029999	Palsa	MKKPYQIESQRAVKRLEEMAAEGNPTVQMVLPMAEMIGWLRKGVGELIRQA
Ga0311338_1000624420	3300030007	Palsa	MKKPYQIEAQRAVKQLEGMAAEGNPAVQMVLPMAEMVGWLRK
Ga0299906_109732201	3300030606	Soil	MKKPYQIEAQRAVRQLEAMAAEGNPAVQMVLPMAEMVGWLREGVG
Ga0170834_1002944081	3300031057	Forest Soil	MKKPYQIEAQRAVRQLEEMAADGDPAVQMVLPMAEMVGWLRQGVGALIRQA
Ga0302324_1016976942	3300031236	Palsa	MKKPYQIETQRAVKQLEAMAADGDPAVQMVLPMAEMVGWLRKGVGELIRQ
Ga0302324_1026135522	3300031236	Palsa	MKRPYQIESQRAVRQLEKMAADGSPAEQMVLPLAE
Ga0170819_134970971	3300031469	Forest Soil	MKKPYQIEAQRAVKQLEAMANDGNPVVQMMLPMAEMVGWLRKGV
Ga0170818_1094856051	3300031474	Forest Soil	MKKPYQIVSQRAVKQLAEMAADGNPAVQMMLPMAEMIGWLRK
Ga0311364_118643712	3300031521	Fen	MKKPYQIEAQRAVKQFEAMAAEGNPAVQMVLPMAEMVGWLRK
Ga0302326_100994438	3300031525	Palsa	MKKPYQIEAQRAVKQLEGMAAEGNPAVQMVLPMAEMV
Ga0247727_105800532	3300031576	Biofilm	MKKLYQIESHRAVKRLERMAADGNRAVQLVLPMAEMVG
Ga0310686_1093234081	3300031708	Soil	MKKPYQIESLRAVKRLEEMAVDGNPAVQMVLPLAEM
Ga0310686_1193921441	3300031708	Soil	MKKPYQIESQRAVKRLEEMAAEGNPTVQMVLPMAEMIGWLRQGVG
Ga0307474_101441091	3300031718	Hardwood Forest Soil	MKKPYQIEAQRAVKQLEAMAADGNPAVQMVLPMAEMMGW
Ga0307472_1004774172	3300032205	Hardwood Forest Soil	SPNRTATCPLKKPYQIESQRAVKRLEEMAGEGNPAVQLVLPMAEALGWLKQDAG
Ga0335082_102978233	3300032782	Soil	MKKPYQIEAQRAVKRLEEKTTDGSSAVQMILPKAEMLGWLRK
Ga0335079_122842902	3300032783	Soil	MKKPYQIEAQRAVKQFEAMATDGNPAVQLVLPLAEMVGWLRKGVGELVRQAG
Ga0335078_114428891	3300032805	Soil	MKKPYQIEAQRAVSKLEAMAADGNPAVQMVLPMAEMVGW
Ga0335078_124604802	3300032805	Soil	MRKPYQIEAQRAVRQLEEMAADGNPAVQMVLPMAEMVGWLRQGVGCRPQKETRR
Ga0335081_102535681	3300032892	Soil	MKKPYQIVSQRAVKRLERMAAEGNPAVQLVLPLAETLGWL
Ga0335083_113963071	3300032954	Soil	MKKPHQIDSQRAVKQLETMAADGNPAVQMVLPMAEMLGWLHKGVGELSRLTL
Ga0335073_103649423	3300033134	Soil	MKKPYQIESQRAVKQFQAMAAEGNPAVQMMLPMAGIIRWLRT
Ga0307507_107051301	3300033179	Ectomycorrhiza	MKKPYQIEAQRAVKRLEEMAAEGNPAVQMVLPMAEMVG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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