Metagenome / Metatranscriptome Family F073200

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073200
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	73 residues
Representative Sequence	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT
Number of Associated Samples	96
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	27.50 %
% of genes from short scaffolds (< 2000 bps)	88.33 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.833 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.667 % of family members)
Environment Ontology (ENVO)	Unclassified (36.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.19% β-sheet: 0.00% Coil/Unstructured: 17.81%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13545	HTH_Crp_2	4.17
PF04226	Transgly_assoc	4.17
PF05957	DUF883	3.33
PF05974	DUF892	2.50
PF00072	Response_reg	1.67
PF13561	adh_short_C2	1.67
PF00999	Na_H_Exchanger	1.67
PF02347	GDC-P	0.83
PF02566	OsmC	0.83
PF05175	MTS	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	4.17
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	3.33
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	2.50
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.67
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.67
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.67
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.67
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.67
COG0403	Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain	Amino acid transport and metabolism [E]	0.83
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.83
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.83
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
All Organisms	root	All Organisms	39.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
cellular organisms	root	All Organisms → cellular organisms	39.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.67 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.33 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27.50 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.17 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.67 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.83 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	3.33 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.67 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.83 %
unclassified Ignavibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria	0.83 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.83 %
Starkeya	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya	0.83 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.33 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.67 %
unclassified Starkeya	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya	0.83 %
Microvirga brassicacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga brassicacearum	0.83 %
Ignavibacteria bacterium GWB2_35_6b	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium GWB2_35_6b	0.83 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.83 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.33 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.67 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.83 %
Starkeya sp. ORNL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp. ORNL1	0.83 %
Microvirga brassicacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga brassicacearum	0.83 %
Ignavibacteria bacterium GWB2_35_6b	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium GWB2_35_6b	0.83 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.83 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.33 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.67 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	0.83 %
Starkeya sp. ORNL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp. ORNL1	0.83 %
Microvirga brassicacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga brassicacearum	0.83 %
Ignavibacteria bacterium GWB2_35_6b	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium GWB2_35_6b	0.83 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_78793	Not Available	789	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100718522	Not Available	817	Open in IMG/M
3300000789\|JGI1027J11758_13080818	Not Available	654	Open in IMG/M
3300004463\|Ga0063356_103306942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	695	Open in IMG/M
3300004801\|Ga0058860_12008200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	828	Open in IMG/M
3300005290\|Ga0065712_10507287	Not Available	645	Open in IMG/M
3300005332\|Ga0066388_100740028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1585	Open in IMG/M
3300005366\|Ga0070659_101073992	Not Available	709	Open in IMG/M
3300005434\|Ga0070709_10626853	Not Available	830	Open in IMG/M
3300005440\|Ga0070705_100039572	All Organisms → cellular organisms → Bacteria → Proteobacteria	2676	Open in IMG/M
3300005441\|Ga0070700_101103931	Not Available	658	Open in IMG/M
3300005539\|Ga0068853_101452505	Not Available	664	Open in IMG/M
3300005546\|Ga0070696_100966862	Not Available	710	Open in IMG/M
3300005546\|Ga0070696_101190421	Not Available	643	Open in IMG/M
3300005549\|Ga0070704_100158481	Not Available	1788	Open in IMG/M
3300005578\|Ga0068854_100704707	Not Available	872	Open in IMG/M
3300005616\|Ga0068852_101819157	Not Available	631	Open in IMG/M
3300005616\|Ga0068852_102597963	Not Available	526	Open in IMG/M
3300005618\|Ga0068864_102718930	Not Available	500	Open in IMG/M
3300005841\|Ga0068863_102087552	Not Available	577	Open in IMG/M
3300005843\|Ga0068860_100394853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1367	Open in IMG/M
3300005843\|Ga0068860_102034214	Not Available	596	Open in IMG/M
3300005844\|Ga0068862_101707141	Not Available	638	Open in IMG/M
3300006852\|Ga0075433_10580578	Not Available	984	Open in IMG/M
3300009094\|Ga0111539_11573784	Not Available	762	Open in IMG/M
3300009094\|Ga0111539_11744652	Not Available	722	Open in IMG/M
3300009098\|Ga0105245_12967411	Not Available	526	Open in IMG/M
3300009101\|Ga0105247_10430990	Not Available	946	Open in IMG/M
3300009101\|Ga0105247_10512262	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300009101\|Ga0105247_11772829	Not Available	513	Open in IMG/M
3300009148\|Ga0105243_10070362	All Organisms → cellular organisms → Bacteria → Proteobacteria	2825	Open in IMG/M
3300009148\|Ga0105243_12964324	Not Available	515	Open in IMG/M
3300009156\|Ga0111538_11570794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	829	Open in IMG/M
3300009156\|Ga0111538_13691340	Not Available	530	Open in IMG/M
3300009168\|Ga0105104_10137111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1322	Open in IMG/M
3300009176\|Ga0105242_10068686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2932	Open in IMG/M
3300009553\|Ga0105249_11659601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	712	Open in IMG/M
3300010147\|Ga0126319_1380044	Not Available	596	Open in IMG/M
3300010154\|Ga0127503_10298772	Not Available	538	Open in IMG/M
3300010371\|Ga0134125_10042457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5060	Open in IMG/M
3300010401\|Ga0134121_10542022	Not Available	1079	Open in IMG/M
3300010403\|Ga0134123_10379738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1288	Open in IMG/M
3300011000\|Ga0138513_100013193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1063	Open in IMG/M
3300011119\|Ga0105246_10668149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	907	Open in IMG/M
3300012482\|Ga0157318_1039148	Not Available	500	Open in IMG/M
3300012485\|Ga0157325_1041131	Not Available	503	Open in IMG/M
3300012490\|Ga0157322_1015996	Not Available	674	Open in IMG/M
3300012508\|Ga0157315_1029720	Not Available	634	Open in IMG/M
3300012514\|Ga0157330_1029059	Not Available	682	Open in IMG/M
3300012517\|Ga0157354_1010751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	915	Open in IMG/M
3300012915\|Ga0157302_10092822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	938	Open in IMG/M
3300012951\|Ga0164300_10016804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2450	Open in IMG/M
3300012951\|Ga0164300_10023205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2180	Open in IMG/M
3300012951\|Ga0164300_10330219	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300012955\|Ga0164298_10012805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3339	Open in IMG/M
3300012955\|Ga0164298_10185244	Not Available	1203	Open in IMG/M
3300012955\|Ga0164298_11627502	Not Available	510	Open in IMG/M
3300012955\|Ga0164298_11643488	Not Available	508	Open in IMG/M
3300012957\|Ga0164303_10573047	Not Available	738	Open in IMG/M
3300012958\|Ga0164299_10768091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300012960\|Ga0164301_10449989	Not Available	915	Open in IMG/M
3300012961\|Ga0164302_11585643	Not Available	544	Open in IMG/M
3300012984\|Ga0164309_10466611	Not Available	958	Open in IMG/M
3300012984\|Ga0164309_11839956	Not Available	519	Open in IMG/M
3300012985\|Ga0164308_10097252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2059	Open in IMG/M
3300012986\|Ga0164304_10186935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1341	Open in IMG/M
3300012987\|Ga0164307_10127841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp. ORNL1	1639	Open in IMG/M
3300012988\|Ga0164306_10630421	Not Available	843	Open in IMG/M
3300012988\|Ga0164306_10785353	Not Available	765	Open in IMG/M
3300013306\|Ga0163162_10113833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2804	Open in IMG/M
3300013307\|Ga0157372_10318072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1812	Open in IMG/M
3300014745\|Ga0157377_10065602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2086	Open in IMG/M
3300014745\|Ga0157377_10766181	Not Available	708	Open in IMG/M
3300014968\|Ga0157379_10122788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2337	Open in IMG/M
3300015371\|Ga0132258_10300080	Not Available	3950	Open in IMG/M
3300015371\|Ga0132258_11273807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga brassicacearum	1858	Open in IMG/M
3300015371\|Ga0132258_12176058	Not Available	1393	Open in IMG/M
3300015371\|Ga0132258_13526304	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300015372\|Ga0132256_100420628	Not Available	1440	Open in IMG/M
3300015373\|Ga0132257_103137779	Not Available	602	Open in IMG/M
3300015373\|Ga0132257_103532566	Not Available	569	Open in IMG/M
3300015374\|Ga0132255_100149975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3249	Open in IMG/M
3300015374\|Ga0132255_101876320	Not Available	911	Open in IMG/M
3300015374\|Ga0132255_102485748	Not Available	791	Open in IMG/M
3300017792\|Ga0163161_10792005	Not Available	796	Open in IMG/M
3300018028\|Ga0184608_10397390	Not Available	599	Open in IMG/M
3300018054\|Ga0184621_10107659	Not Available	990	Open in IMG/M
3300018072\|Ga0184635_10102867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1130	Open in IMG/M
3300018078\|Ga0184612_10562229	Not Available	546	Open in IMG/M
3300018466\|Ga0190268_11712544	Not Available	561	Open in IMG/M
3300018469\|Ga0190270_10715133	Not Available	996	Open in IMG/M
3300018476\|Ga0190274_10379603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1360	Open in IMG/M
3300018481\|Ga0190271_11564105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	775	Open in IMG/M
3300025899\|Ga0207642_10701433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	638	Open in IMG/M
3300025900\|Ga0207710_10058190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1747	Open in IMG/M
3300025914\|Ga0207671_10626692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	857	Open in IMG/M
3300025927\|Ga0207687_11891698	Not Available	510	Open in IMG/M
3300025932\|Ga0207690_11413047	Not Available	582	Open in IMG/M
3300025933\|Ga0207706_10290530	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium GWB2_35_6b	1425	Open in IMG/M
3300025933\|Ga0207706_11050579	Not Available	682	Open in IMG/M
3300025935\|Ga0207709_10419333	Not Available	1028	Open in IMG/M
3300025937\|Ga0207669_11148428	Not Available	657	Open in IMG/M
3300026041\|Ga0207639_11084414	Not Available	751	Open in IMG/M
3300026075\|Ga0207708_10467849	Not Available	1052	Open in IMG/M
3300026088\|Ga0207641_10715224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	987	Open in IMG/M
3300026118\|Ga0207675_100012875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7815	Open in IMG/M
3300031114\|Ga0308187_10240360	Not Available	653	Open in IMG/M
3300031226\|Ga0307497_10209126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	850	Open in IMG/M
3300031231\|Ga0170824_102857254	Not Available	969	Open in IMG/M
3300031562\|Ga0310886_10316482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	897	Open in IMG/M
3300031562\|Ga0310886_10785378	Not Available	599	Open in IMG/M
3300031854\|Ga0310904_10307781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1006	Open in IMG/M
3300031892\|Ga0310893_10587294	Not Available	508	Open in IMG/M
3300032013\|Ga0310906_10137583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1405	Open in IMG/M
3300032075\|Ga0310890_10106192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1772	Open in IMG/M
3300032180\|Ga0307471_100948463	Not Available	1028	Open in IMG/M
3300032205\|Ga0307472_100981789	Not Available	789	Open in IMG/M
3300032211\|Ga0310896_10565562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	631	Open in IMG/M
3300033004\|Ga0335084_11910025	Not Available	580	Open in IMG/M
3300034090\|Ga0326723_0332234	Not Available	685	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.83%
Host-Associated	Host-Associated	49.17%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	48.33%
Terrestrial	Environmental → Terrestrial	45.00%
Aquatic	Environmental → Aquatic	5.83%
Human	Host-Associated → Human	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.33%
Sediment	Environmental → Aquatic → Sediment	3.33%
Freshwater	Environmental → Aquatic → Freshwater	2.50%
Peat	Environmental → Terrestrial → Peat	0.83%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.83%
Digestive System	Host-Associated → Human → Digestive System	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.83%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.83%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.83%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012485	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610	Host-Associated	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01118760	2199352025	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIRGSYGWLGHVAAAVALALVAIRRLLRRT
INPhiseqgaiiFebDRAFT_1007185221	3300000364	Soil	VPDALAKPLDEHTDEELESALARGQLDERKAAIAKEILSRRWQSKSEKIKGSYGWLGHVAAAIALALVAIRRFLRRT*
JGI1027J11758_130808182	3300000789	Soil	MAKPLDEXTDEELEXALAQGXLDERKAAXAKEXLSRRWQXKSXKIKGSXGWLGHVAAAIALALVAIRRFLRRT*
Ga0063356_1033069421	3300004463	Arabidopsis Thaliana Rhizosphere	TDEELESALARGQLDERKAAIAKEILSRRWQSTSEEIKSSYGWFGRVAAAVALTILAIRRLLRRT*
Ga0058860_120082002	3300004801	Host-Associated	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0065712_105072871	3300005290	Miscanthus Rhizosphere	GMAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0066388_1007400282	3300005332	Tropical Forest Soil	MAKPLNEQTDEELETALAHGQLDERKAAIAKEILSRRWQSKAEKIKGSYGWLGHVAAAVALAIVAIRRLLRRT*
Ga0070659_1010739922	3300005366	Corn Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0070709_106268532	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LDEQADEEIEAALAQGQLDERKAATAKEILSRRWQRKSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0070705_1000395724	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0070700_1011039311	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0068853_1014525051	3300005539	Corn Rhizosphere	DGMAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0070696_1009668621	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	HLVADGMAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0070696_1011904212	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRAAAALLLAILAIRRLFRRS*
Ga0070704_1001584811	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	PSQRHLVADGMAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0068854_1007047072	3300005578	Corn Rhizosphere	MAKPLDEQTDEELETALAQGHLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0068852_1018191572	3300005616	Corn Rhizosphere	MARPLDEQTDDELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRAAAALLLAILAIRRLFRRS*
Ga0068852_1025979632	3300005616	Corn Rhizosphere	MAKPLEEQTDEELETALAQGHLDERKAATAKEILSRRWQSKSERIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0068864_1027189301	3300005618	Switchgrass Rhizosphere	MAKPLDEQTDEELETALAQGTERKAATAKEILSRRWQSKSERIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0068863_1020875521	3300005841	Switchgrass Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0068860_1003948532	3300005843	Switchgrass Rhizosphere	MAKPLEEQTDEELETALAQGQLDDRKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0068860_1020342142	3300005843	Switchgrass Rhizosphere	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRAAAALLLAIIAIRRLFRRS*
Ga0068862_1017071412	3300005844	Switchgrass Rhizosphere	MARPLDEQTDEELELSLANSQLDERKAAIAKEILSRRWQSKSEEIKSSYGWFGRAAAALLLAIIAIRRLFRRS*
Ga0075433_105805781	3300006852	Populus Rhizosphere	MAKPLDEQTDEELESALARGQLDERKAAIAKEILSRRWQSTSEEIKSSYGWFGRVAAAVALTILAIRRLLRRT*
Ga0111539_115737841	3300009094	Populus Rhizosphere	MAKPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRAAAAVALAIMVIRRLFRGP*
Ga0111539_117446522	3300009094	Populus Rhizosphere	VPDAMAKPLDEQTDEELESALARGQLDERKAAIAKEILSRRWQSTSEEIKSSYGWFGRVAAAVALTILAIRRLLRRT*
Ga0105245_129674112	3300009098	Miscanthus Rhizosphere	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSNEIKSSYGWFGRAAAAVALAIMVIRRLFRGP*
Ga0105247_104309902	3300009101	Switchgrass Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0105247_105122622	3300009101	Switchgrass Rhizosphere	TDEELETALAQGHLDERKAATAKEILSRRWQSKSERIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0105247_117728291	3300009101	Switchgrass Rhizosphere	MARPLDEQTDEELEIALASGELDERKAAIAKEILSRRWQSKSEEIKSSYGWFGRAAVAVALAIMAIRRLFRRP*
Ga0105243_100703625	3300009148	Miscanthus Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALAL
Ga0105243_129643241	3300009148	Miscanthus Rhizosphere	MAKPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRAAAALLLAIIAIRRLFRRS*
Ga0111538_115707942	3300009156	Populus Rhizosphere	MARPLDEQTDEELELALANGQLDERKAAIAKEILSRRWQSKSEEIKISYGWFGRAAAAVALAIMVIRRLFRGP*
Ga0111538_136913401	3300009156	Populus Rhizosphere	GRAKPLDEQTDEELETALAQGQFDERKAATAKEILSRRWQSKAEKIKGSYGWLGHVAAAVALAIEAIRRLLRRT*
Ga0105104_101371114	3300009168	Freshwater Sediment	CSTSFSRGMARPLDEQTDEELELALASGQLDERKAAIAREILSRRWQSKSEEIKSNYGWFGRAAAALLLAIIAIRRLFRRS*
Ga0105242_100686865	3300009176	Miscanthus Rhizosphere	MAKPLDEQTDEELETALAQGQLDDRKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0105249_116596011	3300009553	Switchgrass Rhizosphere	MAKPLDEQTDEELEMALANGQLDERKAAIAKEIPFRRWQSKSEEIKSSYGWFGRAAVAVALANHGH*
Ga0126319_13800441	3300010147	Soil	MAKPLDEQTDEELETALAQGQLDERKAAIAKEILSRRWQSKSEKIKGSYGWLGHVAAAIAVALVAIRRLLRRT*
Ga0127503_102987721	3300010154	Soil	MGKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAFALALVAIRRLLRRT*
Ga0134125_100424571	3300010371	Terrestrial Soil	MAKPLDEQTDEELETALAQGKLDGRKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0134121_105420223	3300010401	Terrestrial Soil	SSQRHLVADGMAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0134123_103797383	3300010403	Terrestrial Soil	DEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0138513_1000131931	3300011000	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIRGSYGWLGHVAAAVALALVAIRRLLTRT*
Ga0105246_106681492	3300011119	Miscanthus Rhizosphere	MADEQTVEELEMALANGQLDERKAAIAKEILSRRWQSKSEEIKSSYGWFGRAAAAVALAIMVIRRLFRGP*
Ga0157318_10391481	3300012482	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAFALALVAIRRLLRRT*
Ga0157325_10411311	3300012485	Arabidopsis Rhizosphere	MVWLILSTKELETALAQGQLDERKAATAREILSRRWQSKSEKIKGSYGWLGHVAAAFALALVAIRRLLRRT*
Ga0157322_10159961	3300012490	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAKEILYRRWQSKSEKIRGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0157315_10297201	3300012508	Arabidopsis Rhizosphere	ELETALAQGQLDERKAATAKEILSRRWQSKAEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0157330_10290591	3300012514	Soil	MAKPLDEQTNEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0157354_10107511	3300012517	Unplanted Soil	MAKPLDEQTDEELEMALANGQLDERKAAIAKEILSRRWQSKSKEIKSSYGWFGRAAVAVALAIMAIRRLFGRP*
Ga0157302_100928222	3300012915	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALVIVAIRRLLRRT*
Ga0164300_100168042	3300012951	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIRGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0164300_100232053	3300012951	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQNTSEKIRGSYGWFGHVAAAVVLALVAIRRLLRRT*
Ga0164300_103302191	3300012951	Soil	DGMAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSERIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0164298_100128055	3300012955	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQNKSEKIRGSYGWFGHVAAAVVLALVAIRRLLRRT*
Ga0164298_101852441	3300012955	Soil	SQRHLVADGMAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT*
Ga0164298_116275021	3300012955	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSERIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0164298_116434881	3300012955	Soil	MAKPLAEQTDEELELALAEGKLDQRRAATAKEILSRRWQAKSEVIKSSYGWAGRVAAAIALVLITLRRVFRRT*
Ga0164303_105730471	3300012957	Soil	MAKPLAEQTDEELELALAEGKLDQRKAATAKEILSRRWQAKSEVIKSSYGRAGRAAAIIALVLITIRRVFRRT*
Ga0164299_107680913	3300012958	Soil	MAKPLDEQTDEELETALAQGQLDDRKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALAL
Ga0164301_104499891	3300012960	Soil	MAKPLAEQTDEELELALAEGKLDQRKAATAKEILSRRWQAKSEVIKSSYGWAGRVVAVIALVLITIRRVFRRT*
Ga0164302_115856431	3300012961	Soil	MAKPLDEQTDEELEMALANGQLDERKAAIAKEILSRRWQSKSEEIKSSYGWFGRAAVAVALAIMAIRRLFRRP*
Ga0164309_104666112	3300012984	Soil	MAKPLAEQTDEELELALAEGKLDQRKAATAKEILSRRWQAKSEVIKSNYGWAGRAAAIIALVLITLRRVFRVRRT*
Ga0164309_118399561	3300012984	Soil	MAKPLDEQTDEELETALAQGHLDERKAATAKEILSRRWQSKSERIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0164308_100972524	3300012985	Soil	MAKPLDEQTDEELETALAQGQPERKAATAKEILSRRWQSKSEKIRGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0164304_101869351	3300012986	Soil	DGMAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIRGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0164307_101278412	3300012987	Soil	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLVERT*
Ga0164306_106304211	3300012988	Soil	MAKPLAEQTDEELELALAEGKLDQRRAATAKEILSRRWQAKSEVIKSSYGWAGRVVAVIALVLITIRRVFRRT*
Ga0164306_107853532	3300012988	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQNKSEKIRGSYGWFGHVAAAVALALVAIRRLLRRT*
Ga0163162_101138333	3300013306	Switchgrass Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALAIVAIRRLLRRT*
Ga0157372_103180721	3300013307	Corn Rhizosphere	MAKPLDEQTDEELETALAQGHLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0157377_100656023	3300014745	Miscanthus Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSERIKGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0157377_107661812	3300014745	Miscanthus Rhizosphere	MARPLDEQTDEELELALANGQLDERKAAIPKEILSRRWQSKSEEIKSSYGWFGRAAAALLLAIIAIRRLF
Ga0157379_101227883	3300014968	Switchgrass Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAATVALALVAIRRLLRRT*
Ga0132258_103000806	3300015371	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKAEKIKGSYGWLGHVAAAVALAIVAIRRLLRRT*
Ga0132258_112738071	3300015371	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAREILSRRWQSKSEKIKGSYGWLGHVAAAVALA
Ga0132258_121760581	3300015371	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALSLVAIRRLLRRT*
Ga0132258_135263041	3300015371	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQGQLDDRKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAFALALVAIRRLLRRT*
Ga0132256_1004206283	3300015372	Arabidopsis Rhizosphere	PLDEQTDEELETALAQGQLDERKAATAKVILSRRWQSKSEKITGSYGWLGHVAAAVALALVAIRRLLRRT*
Ga0132257_1031377791	3300015373	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQRQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAVVALAIIAIRRLLRRT*
Ga0132257_1035325661	3300015373	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQGQLDDRKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAFALALV
Ga0132255_1001499753	3300015374	Arabidopsis Rhizosphere	MAWLSLSTNRTDEELETALAQGQLDERKAATAKEILSRRWQSKPEKIRGSYGWFGHVAAAVALALVAIRRLLRRT*
Ga0132255_1018763201	3300015374	Arabidopsis Rhizosphere	QTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGLLGHVAAAVALAIVAIRRLLRRT*
Ga0132255_1024857481	3300015374	Arabidopsis Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAVVALSIIAIRRLLRRT*
Ga0163161_107920051	3300017792	Switchgrass Rhizosphere	SQRHLVADGMAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT
Ga0184608_103973901	3300018028	Groundwater Sediment	MAKPLDEQTDEELEMALANGQLDERKAAIAKEILSRRWQSKSEEIKSSYGWFGRAAVAVALAIMAIRRLFRRF
Ga0184621_101076591	3300018054	Groundwater Sediment	MVWLILSTKELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAFALALVAIRRLLRRT
Ga0184635_101028672	3300018072	Groundwater Sediment	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAFALALVAIRRLLRRT
Ga0184612_105622291	3300018078	Groundwater Sediment	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKAEKIKGSYGWLGHVAAAVALALVAIRRLLKRT
Ga0190268_117125441	3300018466	Soil	MAKPLDEQTDEELELALVDGQLDERKAAIAKEILSRRWQSKSEEIKSSYGWFGRAAAALLLAIIAIRRLFRRS
Ga0190270_107151331	3300018469	Soil	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRAAAALLLAIIAIRRLFRRS
Ga0190274_103796031	3300018476	Soil	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEINSSYGWFGRAAAAVALAIMVIRRLLRGP
Ga0190271_115641052	3300018481	Soil	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRAAAAVALAIMVIRRLLRGP
Ga0207642_107014331	3300025899	Miscanthus Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRR
Ga0207710_100581901	3300025900	Switchgrass Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT
Ga0207671_106266921	3300025914	Corn Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT
Ga0207687_118916982	3300025927	Miscanthus Rhizosphere	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSNEIKSSYGWFGRAAAAVALAIMVIRRLFRGP
Ga0207690_114130471	3300025932	Corn Rhizosphere	PLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT
Ga0207706_102905303	3300025933	Corn Rhizosphere	MAKPLDEQTDEELELALANGQLDERKAAIAKEILSRRWQSKSEEIKISYGWFGRAAAAVALAIMVIRRLFRGP
Ga0207706_110505791	3300025933	Corn Rhizosphere	AKPLDEQTDEELETALAQGQLDDRKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT
Ga0207709_104193332	3300025935	Miscanthus Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT
Ga0207669_111484281	3300025937	Miscanthus Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT
Ga0207639_110844142	3300026041	Corn Rhizosphere	IPSQRHLVADGMAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAAAVALALLAIRRLLRRT
Ga0207708_104678492	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRAAAAVALAIMVIRRLFRGP
Ga0207641_107152242	3300026088	Switchgrass Rhizosphere	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQSRSEKIKGSYGWLGHVAATVALALVAIRRLLRRT
Ga0207675_1000128753	3300026118	Switchgrass Rhizosphere	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKAEKIKGSYGWLGHVAAAVALALVAIRRLLRRT
Ga0308187_102403602	3300031114	Soil	DRAPIPSQRHLVADGMAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIRGSYGWLGHVAAAVALALVAIRRLLRRT
Ga0307497_102091262	3300031226	Soil	MAKPLDEQTDEELETTLAQGQLDERKAATAKEILSRRWQNKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT
Ga0170824_1028572541	3300031231	Forest Soil	MAKPLADQTDEELELALAEGKLDQRKAATAKEILSRRWQAKSEVIKSRYGWAGRVAAVIALVLITIRRVFRRT
Ga0310886_103164822	3300031562	Soil	MAKPLDEQTDEELETALAQGKLDERKAATAKEILSRRWQNKSEKIRGSYDWFGHVAAAVVLALVAIRRLLRRT
Ga0310886_107853782	3300031562	Soil	MARPLDEQTDEELEMALANGQLDERKAAIAKEILSRRWQSKSEEIKSSYGWFGRAAAAVALAIMVIRRLFRGP
Ga0310904_103077811	3300031854	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIRGSYGWFGHVAAAVVLALVAIRRLLRRT
Ga0310893_105872941	3300031892	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQNTSEKIRGSYGWFGQVAAAVVLALVAIRRLLRRT
Ga0310906_101375832	3300032013	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQNKSEKIRGSYGWFGHVAAAVVLALVAIRRLLRRT
Ga0310890_101061923	3300032075	Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQNTSEKIRGSYGWFGHVAAAVVLALVAIRRLLRRT
Ga0307471_1009484632	3300032180	Hardwood Forest Soil	MAKPLDEQTDEELETALAQGQLDERKAAIAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALAIVAIRRLLRRT
Ga0307472_1009817891	3300032205	Hardwood Forest Soil	LDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWLGHVAAAVALALVAIRRLLRRT
Ga0310896_105655622	3300032211	Soil	MARPLDEQTDEELELALANGQLDERKAAVAKEILSRRWQSKSEEIKSSYGWFGRSAAAVALAIMVIRRLFRGP
Ga0335084_119100251	3300033004	Soil	MAMPLDEQTDEELETALAQGQLDERKAAIAKEILSRRWRSKSEKMKGSYGWLGRAAAGLALALVAIRRLLRRT
Ga0326723_0332234_296_517	3300034090	Peat Soil	MAKPLDEQTDEELETALAQGQLDERKAATAKEILSRRWQSKSEKIKGSYGWFGHVAAAVALALVAIRRLLRRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073200

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences