Metagenome / Metatranscriptome Family F073209

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073209
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	76 residues
Representative Sequence	MTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Number of Associated Samples	59
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.83 %
% of genes near scaffold ends (potentially truncated)	29.17 %
% of genes from short scaffolds (< 2000 bps)	98.33 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (27.500 % of family members)
Environment Ontology (ENVO)	Unclassified (27.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.77% β-sheet: 0.00% Coil/Unstructured: 69.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00196	GerE	4.17
PF13649	Methyltransf_25	4.17
PF00009	GTP_EFTU	3.33
PF05175	MTS	1.67
PF12697	Abhydrolase_6	0.83
PF06644	ATP11	0.83
PF13424	TPR_12	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.67 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.83 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	34.17 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	34.17 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	34.17 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
dothideomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
Dothideomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
Dothideomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetidae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
Mycosphaerellales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetidae → Mycosphaerellales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
Teratosphaeriaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetidae → Mycosphaerellales → Teratosphaeriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
Salinomyces	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetidae → Mycosphaerellales → Teratosphaeriaceae → Salinomyces	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	34.17 %
Salinomyces thailandica	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetidae → Mycosphaerellales → Teratosphaeriaceae → Salinomyces → Salinomyces thailandica	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000750\|JGI12272J11983_1116107	Not Available	511	Open in IMG/M
3300003308\|Ga0006777J48905_1067832	Not Available	513	Open in IMG/M
3300004157\|Ga0062590_102128846	Not Available	585	Open in IMG/M
3300004463\|Ga0063356_103544717	Not Available	672	Open in IMG/M
3300004800\|Ga0058861_11969234	Not Available	688	Open in IMG/M
3300004801\|Ga0058860_12213124	Not Available	509	Open in IMG/M
3300005329\|Ga0070683_101868665	Not Available	577	Open in IMG/M
3300005562\|Ga0058697_10696662	Not Available	540	Open in IMG/M
3300006845\|Ga0075421_100358183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1761	Open in IMG/M
3300006845\|Ga0075421_101025173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	932	Open in IMG/M
3300006845\|Ga0075421_102176781	Not Available	586	Open in IMG/M
3300006894\|Ga0079215_10258215	Not Available	930	Open in IMG/M
3300006918\|Ga0079216_10466427	Not Available	820	Open in IMG/M
3300006918\|Ga0079216_10979800	Not Available	650	Open in IMG/M
3300009147\|Ga0114129_13294993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	522	Open in IMG/M
3300009789\|Ga0126307_10105670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	2234	Open in IMG/M
3300009789\|Ga0126307_10175080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1720	Open in IMG/M
3300009789\|Ga0126307_10354461	Not Available	1182	Open in IMG/M
3300009789\|Ga0126307_10473501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1011	Open in IMG/M
3300009789\|Ga0126307_10980193	Not Available	683	Open in IMG/M
3300009840\|Ga0126313_10168830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1664	Open in IMG/M
3300009840\|Ga0126313_10231884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1427	Open in IMG/M
3300009840\|Ga0126313_10424374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1057	Open in IMG/M
3300009840\|Ga0126313_11803974	Not Available	512	Open in IMG/M
3300010036\|Ga0126305_10723185	Not Available	674	Open in IMG/M
3300010037\|Ga0126304_10170709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1414	Open in IMG/M
3300010037\|Ga0126304_10179279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1380	Open in IMG/M
3300010038\|Ga0126315_10142305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1414	Open in IMG/M
3300010039\|Ga0126309_10206554	Not Available	1090	Open in IMG/M
3300010039\|Ga0126309_10460817	Not Available	774	Open in IMG/M
3300010039\|Ga0126309_10629958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	679	Open in IMG/M
3300010039\|Ga0126309_10655318	Not Available	668	Open in IMG/M
3300010040\|Ga0126308_10110202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1698	Open in IMG/M
3300010040\|Ga0126308_10583257	Not Available	761	Open in IMG/M
3300010041\|Ga0126312_10606755	Not Available	787	Open in IMG/M
3300010042\|Ga0126314_10205386	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300010044\|Ga0126310_10163976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1428	Open in IMG/M
3300010044\|Ga0126310_10428617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	949	Open in IMG/M
3300010044\|Ga0126310_10948809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	674	Open in IMG/M
3300010044\|Ga0126310_11035141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	649	Open in IMG/M
3300010045\|Ga0126311_10452660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	997	Open in IMG/M
3300010045\|Ga0126311_11009878	Not Available	680	Open in IMG/M
3300010045\|Ga0126311_11816629	Not Available	517	Open in IMG/M
3300010145\|Ga0126321_1016543	Not Available	772	Open in IMG/M
3300010145\|Ga0126321_1155641	Not Available	925	Open in IMG/M
3300010145\|Ga0126321_1266260	Not Available	526	Open in IMG/M
3300010146\|Ga0126320_1423445	All Organisms → cellular organisms → Bacteria → Terrabacteria group	842	Open in IMG/M
3300010166\|Ga0126306_10074889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	2401	Open in IMG/M
3300010166\|Ga0126306_10619135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	864	Open in IMG/M
3300010166\|Ga0126306_10911640	Not Available	713	Open in IMG/M
3300010166\|Ga0126306_10965363	Not Available	693	Open in IMG/M
3300010166\|Ga0126306_11645401	Not Available	535	Open in IMG/M
3300011332\|Ga0126317_10697603	Not Available	501	Open in IMG/M
3300011332\|Ga0126317_10957682	Not Available	511	Open in IMG/M
3300011332\|Ga0126317_10965047	Not Available	714	Open in IMG/M
3300011333\|Ga0127502_10283296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	521	Open in IMG/M
3300012093\|Ga0136632_10193216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	929	Open in IMG/M
3300012212\|Ga0150985_101282653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	923	Open in IMG/M
3300012212\|Ga0150985_101321131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	870	Open in IMG/M
3300012212\|Ga0150985_103263503	Not Available	663	Open in IMG/M
3300012212\|Ga0150985_105228847	Not Available	650	Open in IMG/M
3300012212\|Ga0150985_105944499	Not Available	500	Open in IMG/M
3300012212\|Ga0150985_114081653	Not Available	649	Open in IMG/M
3300012212\|Ga0150985_118325763	Not Available	907	Open in IMG/M
3300012212\|Ga0150985_122321423	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetidae → Mycosphaerellales → Teratosphaeriaceae → Salinomyces → Salinomyces thailandica	734	Open in IMG/M
3300012212\|Ga0150985_122533597	Not Available	537	Open in IMG/M
3300012469\|Ga0150984_101534455	Not Available	757	Open in IMG/M
3300012469\|Ga0150984_102851221	Not Available	527	Open in IMG/M
3300012469\|Ga0150984_103783695	Not Available	800	Open in IMG/M
3300012469\|Ga0150984_108444906	Not Available	702	Open in IMG/M
3300012469\|Ga0150984_109004579	Not Available	508	Open in IMG/M
3300012469\|Ga0150984_110081828	Not Available	924	Open in IMG/M
3300012469\|Ga0150984_116145257	Not Available	527	Open in IMG/M
3300012469\|Ga0150984_122763534	Not Available	862	Open in IMG/M
3300012680\|Ga0136612_10402934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	694	Open in IMG/M
3300012681\|Ga0136613_10629728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	576	Open in IMG/M
3300014255\|Ga0075320_1067550	Not Available	667	Open in IMG/M
3300014310\|Ga0075331_1166777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	545	Open in IMG/M
3300015077\|Ga0173483_10495736	Not Available	650	Open in IMG/M
3300017789\|Ga0136617_10402176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1105	Open in IMG/M
3300017789\|Ga0136617_10654329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	819	Open in IMG/M
3300018432\|Ga0190275_10508643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1239	Open in IMG/M
3300018432\|Ga0190275_13138732	Not Available	535	Open in IMG/M
3300018465\|Ga0190269_11157389	Not Available	603	Open in IMG/M
3300018466\|Ga0190268_10268534	All Organisms → cellular organisms → Bacteria → Terrabacteria group	997	Open in IMG/M
3300018933\|Ga0193614_1137489	Not Available	673	Open in IMG/M
3300019254\|Ga0184641_1392796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	755	Open in IMG/M
3300019269\|Ga0184644_1316207	Not Available	508	Open in IMG/M
3300019279\|Ga0184642_1181179	Not Available	955	Open in IMG/M
3300020070\|Ga0206356_10845750	Not Available	878	Open in IMG/M
3300028592\|Ga0247822_10520450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	944	Open in IMG/M
3300030830\|Ga0308205_1020119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	760	Open in IMG/M
3300030830\|Ga0308205_1044872	Not Available	576	Open in IMG/M
3300030830\|Ga0308205_1049829	Not Available	556	Open in IMG/M
3300030830\|Ga0308205_1066983	Not Available	501	Open in IMG/M
3300030902\|Ga0308202_1029504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	916	Open in IMG/M
3300030902\|Ga0308202_1029542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	916	Open in IMG/M
3300030902\|Ga0308202_1044809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	794	Open in IMG/M
3300030902\|Ga0308202_1088459	Not Available	625	Open in IMG/M
3300030902\|Ga0308202_1116674	Not Available	567	Open in IMG/M
3300030903\|Ga0308206_1051438	Not Available	819	Open in IMG/M
3300030903\|Ga0308206_1070187	Not Available	735	Open in IMG/M
3300030903\|Ga0308206_1163052	Not Available	544	Open in IMG/M
3300030959\|Ga0102747_10818370	Not Available	529	Open in IMG/M
3300031039\|Ga0102760_10001329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	782	Open in IMG/M
3300031039\|Ga0102760_10091782	Not Available	694	Open in IMG/M
3300031039\|Ga0102760_10958283	Not Available	620	Open in IMG/M
3300031058\|Ga0308189_10284746	Not Available	639	Open in IMG/M
3300031091\|Ga0308201_10050492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1041	Open in IMG/M
3300031091\|Ga0308201_10212509	Not Available	646	Open in IMG/M
3300031091\|Ga0308201_10278895	Not Available	587	Open in IMG/M
3300031092\|Ga0308204_10091983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	821	Open in IMG/M
3300031092\|Ga0308204_10129363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	728	Open in IMG/M
3300031092\|Ga0308204_10298496	Not Available	538	Open in IMG/M
3300031852\|Ga0307410_11806653	Not Available	543	Open in IMG/M
3300031903\|Ga0307407_11606734	Not Available	516	Open in IMG/M
3300031995\|Ga0307409_101179434	Not Available	789	Open in IMG/M
3300031995\|Ga0307409_101204763	Not Available	781	Open in IMG/M
3300032126\|Ga0307415_102004505	Not Available	564	Open in IMG/M
3300033551\|Ga0247830_11216176	Not Available	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.17%
Host-Associated	Host-Associated	25.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.83%
Plants	Host-Associated → Plants	24.17%
Aquatic	Environmental → Aquatic	13.33%
Human	Host-Associated → Human	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.00%
Freshwater	Environmental → Aquatic → Freshwater	13.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Digestive System	Host-Associated → Human → Digestive System	1.67%
Phylloplane	Host-Associated → Plants → Phylloplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	6.67%
Ice	Environmental → Aquatic → Freshwater → Ice	4.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.67%
Sand	Environmental → Terrestrial → Soil → Sand	1.67%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.67%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.67%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	27.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.50%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	7.50%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	6.67%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.67%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.67%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003308	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030959	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 2A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12272J11983_11161072	3300000750	Soil	MSDNVPGRRTAISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRSFLGWTATATSFFIAAVVLGVIMVVVIAFFAGAF*
Ga0006777J48905_10678322	3300003308	Avena Fatua Rhizosphere	MAMSEPVPGRRTAISKDPIGVDPIGNDPLDLSDAPPRKDAGPNRSVLGWTATATTFFIAAVILGVIMVAVIIYLANRT*
Ga0062590_1021288462	3300004157	Soil	MTEPTPGRPTSISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTVLGWTATATTFFIAAVVLGVIMVAIIAILAGRS*
Ga0063356_1035447171	3300004463	Arabidopsis Thaliana Rhizosphere	MTEPTPGRRTTISKDPVGIDPIGNDPLDLSDAPPKQGDGPNRTFLGWTATATSFFIAAVVLGVIMVAVIAILAGRS*
Ga0058861_119692342	3300004800	Host-Associated	MTDNSVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRQGEGPNRTLLGWTSTATTVFIAAVVLGLIMVIIILYLAGTF*
Ga0058860_122131242	3300004801	Host-Associated	MDQDVPGRRTAISKDPIGVDPIGYDPLDMSDAPPRQTEGPNRTFLGWTGTATSFFIAAVVLGVIMVVIIAYLAART*
Ga0070683_1018686652	3300005329	Corn Rhizosphere	MTDNSVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRQGEGPNRTLLGWTSTATTVFIAAVVLGLIMVII
Ga0058697_106966622	3300005562	Agave	MTEPTPGRRTSVSKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLCLTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0075421_1003581831	3300006845	Populus Rhizosphere	MRERSVGLNEQVPGRRTPISKDPIGVDPIGNDPLDMSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAIIIYF
Ga0075421_1010251733	3300006845	Populus Rhizosphere	MAMTEPVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRKDDGPNRSIGGWTANATTFFIAAVILGVIMVAIIVWLANRT*
Ga0075421_1021767812	3300006845	Populus Rhizosphere	MTDDVPGTRTPISRDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATSFFIAAVVLGVIMVVIIAFFAGRF*
Ga0079215_102582151	3300006894	Agricultural Soil	MTESTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTILGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0079216_104664272	3300006918	Agricultural Soil	MTEPTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTILGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0079216_109798002	3300006918	Agricultural Soil	MTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATSFFIAAVVLGVIMVAVIAILAGRS*
Ga0114129_132949931	3300009147	Populus Rhizosphere	MGVSEREERGMNEQIPGRRTPISTDPIGVDPIGNDPLDLSDAPPKQGPGPNRTCLGWTATATTFFIAAVVLGVIMVAIIVYFVGQT*
Ga0126307_101056703	3300009789	Serpentine Soil	MTEPTPGRRTSVSKDPIGIDPIGNDPLDLSDAPPKQGDGPNRTFLGWTATATSFFIAAVVLGVIMVAVIAILAGRS*
Ga0126307_101750801	3300009789	Serpentine Soil	MTEQTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126307_103544614	3300009789	Serpentine Soil	MNREERAMTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLG
Ga0126307_104735013	3300009789	Serpentine Soil	LGIGNEEERAMTEPTPGQRTPISKDPVGIDPIGNDPLDLSDAPPKQGDGPNRTVLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126307_109801932	3300009789	Serpentine Soil	MTEPTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126313_101688302	3300009840	Serpentine Soil	MTEPTPGRPTSISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTILGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126313_102318841	3300009840	Serpentine Soil	TISKDPIGVDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVIIIAILAGRS*
Ga0126313_104243742	3300009840	Serpentine Soil	MTEPTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGDGPNRTFLGWTATATSFFIAAVVLGVIMVAVIAILAGRS*
Ga0126313_118039741	3300009840	Serpentine Soil	EPTPGRRTSVSKDPIGIDPIGNDPLDLSDAPPRQGDGPNRTVLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126305_107231852	3300010036	Serpentine Soil	DDVPGTRTPISRDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATSFFIAAVVLGVIMVVVIAYFAGVF*
Ga0126304_101707091	3300010037	Serpentine Soil	MTEQTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMV
Ga0126304_101792794	3300010037	Serpentine Soil	RRTTISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTVLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126315_101423051	3300010038	Serpentine Soil	MTEPTPGRRTTISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTVLGWTATATTFFIAAVVLGVIMVAVIAILAG
Ga0126309_102065541	3300010039	Serpentine Soil	MTEQTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVILGVIMVAVI
Ga0126309_104608172	3300010039	Serpentine Soil	MTEPTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGDGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126309_106299581	3300010039	Serpentine Soil	TEPTPGRRTSVSKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126309_106553181	3300010039	Serpentine Soil	MSEPTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126308_101102023	3300010040	Serpentine Soil	MTEPTPGRPTSISKDPIGIDPIGNDPLDFSDAPPKQGPGPNRTILGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126308_105832572	3300010040	Serpentine Soil	RGALGITKREERAMTEPTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126312_106067551	3300010041	Serpentine Soil	MTEPTPGRPTSISKDPIGIDPIGNDPLDFSDAPPKQGPGPNRTILGWTATATTFFIAAVVLGVIMVAVIA
Ga0126314_102053864	3300010042	Serpentine Soil	MTERTPGRPTSISKDPIGVDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAIL
Ga0126310_101639762	3300010044	Serpentine Soil	MTEPTPGRPTSISKDPIGIDPIGNDPLDLSDAPPHQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126310_104286171	3300010044	Serpentine Soil	MTEPTPGRRTTISKDPIGIDPIGNDPLDLSDAPPKQGSGPNRTFLGWTATATTFFIAAVVLAVIMVAVIAILAGRS*
Ga0126310_109488091	3300010044	Serpentine Soil	MTEQTPGRRTSISKDPIGIDPIGNDPLDLSDAPPRQGEGPNRTFLGWTATATTFFIAAVVLGVIMVALIVIFAGRY*
Ga0126310_110351412	3300010044	Serpentine Soil	GRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGDGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126311_104526602	3300010045	Serpentine Soil	MTEPTPGRPTSISKDPIGIDPIGNDPLDFSDAPPKQGPGPNRTILGWTATATTFFIAAVVLGVIMVAIIAILAGRS*
Ga0126311_110098782	3300010045	Serpentine Soil	MTEPTPGRRTSVSKDPIGIDPIGNDPLDLSDAPPRQGDGPNRTVLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126311_118166293	3300010045	Serpentine Soil	MTERTPGRPTSISKDPIGVDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVA
Ga0126321_10165433	3300010145	Soil	MAMTEPVPGRRTPISRDPIGVDPIGNDPLDLSDAPPRKDEGPNRTALGWTATATTFFIAAVIVGVIMVAIISWLANR
Ga0126321_11556411	3300010145	Soil	MTETEKERPGRPTRISRDPIGTDPIGYDPLDLSDTPPSKTNEGPNRTFLGWTATATTFFAAAVVLGVIMIIAIIFFATRY*
Ga0126321_12662602	3300010145	Soil	MTEPTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTVLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126320_14234452	3300010146	Soil	MAMTEPVPGRQTTISKDPIGVDPIGNDPLDLSDAPPRKDAGPNRSVLGWTATATTFFIAAVILGVIMVAVIIYLANRT*
Ga0126306_100748893	3300010166	Serpentine Soil	MNREERAMTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126306_106191351	3300010166	Serpentine Soil	KREERVMTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATSFFIAAVVLGVIMVAVIAILAGRS*
Ga0126306_109116403	3300010166	Serpentine Soil	MTEPTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATSFFIAAVVLGVIMVAVIA
Ga0126306_109653631	3300010166	Serpentine Soil	TPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQEEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126306_116454011	3300010166	Serpentine Soil	MTDDVPGTRTPISRDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATSFFIAAVVLGVIMVVVIAYFAGVF*
Ga0126317_106976032	3300011332	Soil	MTDNVPGRRTTVSKDPIGIDPIGNDPLDFSDAPPKQGPGPNRTFLGWTATATSFFIAAVVLGVIMVVIIAFFAGRF*
Ga0126317_109576821	3300011332	Soil	MTEPTPGRPTSISKDPIGIDPIGNDPLDFSDAPPRQGDGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0126317_109650472	3300011332	Soil	MTEPTPGRRTTISKDPIGIDPIGNDPLDLSDAPPKQGDGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0127502_102832961	3300011333	Soil	MGVSEREERGMNEQIPGRQTPISTDPIGVDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAIIVYFVGQT*
Ga0136632_101932161	3300012093	Polar Desert Sand	MTDSVPGRETPISTDPIGTDPIGNDPLDMSDAPPTQGQGPNQTAGKFTANVATFFIAAVVLGVIMIAIVIYFSGRT*
Ga0150985_1012826533	3300012212	Avena Fatua Rhizosphere	VAAIAEETFMATTEPVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRKDPGPNRTVLGWTATATSFFIAAVILGVIMVAIIIYLANRT*
Ga0150985_1013211314	3300012212	Avena Fatua Rhizosphere	MAMTEPVPGRRTPISTDPIGVDPIGNDPLDMSDAPPRKDEGPNRSFLGWTGTATTFFISAVILGVIMVAIIIWLANRT*
Ga0150985_1032635031	3300012212	Avena Fatua Rhizosphere	MAMTEPVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRKDDGPNRSFLGWTGTATTFFIAAVIAGVIMVAVIIWLANRT*
Ga0150985_1052288471	3300012212	Avena Fatua Rhizosphere	MAMTEPVPGRRTAISKDPIGVDPIGNDPLDLSDAPPRKDAGPNRTVLGWTATATTFFIAAVIVGVIMVAIIIWLANRT*
Ga0150985_1059444991	3300012212	Avena Fatua Rhizosphere	MARTEPVPGRRTSISTDPIGVDPIGNDPLDLSDAPPRKDDGPNRTFLGWTGTATTFFIAAVIAGVIMVAVIIWLANRT*
Ga0150985_1140816532	3300012212	Avena Fatua Rhizosphere	MAMTEPVPGRRTPISTDPIGVDPIGNDPLDMSDAPPRKDEGPNRSFLGWTGTATTFFISAVILGVIMVAIIIWL
Ga0150985_1183257633	3300012212	Avena Fatua Rhizosphere	MAMTEPVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRKDEGPNLTFLGWTGTATTFFISAVILGVIMVAIIIWLANRT*
Ga0150985_1223214232	3300012212	Avena Fatua Rhizosphere	MTEPTPGRRTTISKDPIGIDPIGNDPLDLSDAPPHKGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0150985_1225335971	3300012212	Avena Fatua Rhizosphere	MTERTPGRPTSISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTVLGWTATATSFFIAAVVLGVIMVAIIAILAGRS*
Ga0150984_1015344553	3300012469	Avena Fatua Rhizosphere	MTEPTPGRRTTISKDPIGVDPIGNDPLDLSDAPPHQGSGPNRTFLGWTATATTFFIAAVVLAVIMVAVIAILAGRS*
Ga0150984_1028512211	3300012469	Avena Fatua Rhizosphere	MTERTPGRPTSISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0150984_1037836951	3300012469	Avena Fatua Rhizosphere	MAMTEPVPGRRTPISTDPIGVDPIGNDPLDMSDAPPRKDEGPNRSFLGWTGTATTFFISAVILGVIMVAI
Ga0150984_1084449061	3300012469	Avena Fatua Rhizosphere	VAAVAKERCMAMSEPVPGRRTPISTDPIGIDPIGNDPLDLSDAPPRKDPGPNRTVLGWTATATTFFISAVILGAIMVAIIVWFANRT*
Ga0150984_1090045791	3300012469	Avena Fatua Rhizosphere	MAMTEPVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRKDDGPNRTFLGWTGTATTFFIAAVIAGVIMVAVIIWLANRT*
Ga0150984_1100818281	3300012469	Avena Fatua Rhizosphere	VAAVAKERFMAMTEPVPGRRTAISKDPIGVDPIGNDPLDLSDAPPRKDAGPNRTVLGWTATATTFFIAAVIVGVIMVAIIIWLANRT*
Ga0150984_1161452572	3300012469	Avena Fatua Rhizosphere	MTEPTPGRRTSVSKDPIGIDPIGNDPLDLSDAPPRQGDGPNRTVLGWTATATTFFIAAVVLGVIMIAVIAILAGRS*
Ga0150984_1227635341	3300012469	Avena Fatua Rhizosphere	MAMTEPVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRKDEGPNRTFLGWTGTATTFFISAVILGVIMVAIIIWLANRP*
Ga0136612_104029342	3300012680	Polar Desert Sand	MTDSVPGRETPISTDPIGTDPIGNDPLDMSDAPPTQGQGPNQTAGKFTANVATFFIAAVVLGLIMVAIVIYFSGQT*
Ga0136613_106297282	3300012681	Polar Desert Sand	MTDSVPGRETPISTDPIGTDPIGNDPLDMSDAPPTQGQGPNQTAGKFTANVTTFFIAAVVLGVIMIAIVIYFSGRT*
Ga0075320_10675501	3300014255	Natural And Restored Wetlands	MTEQPPGRRTAISTDPIGVDPIGNDPLDLSDAPPRKDEGPNRTIGGWTATATTFFIAAVVLAVIMVAVIYLLAARTVAVTGS*
Ga0075331_11667771	3300014310	Natural And Restored Wetlands	PGRRTPISKDPIGVDPIGNDPLDMSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAIIIYFAGRM*
Ga0173483_104957362	3300015077	Soil	MTEPTPGRPTTISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS*
Ga0136617_104021762	3300017789	Polar Desert Sand	MTDSVPGRETPISTDPIGTDPIGNDPLDMSDAPPTQGQGPNQTAGKFTANVATFFIAAVVLGVIMIAIIIYFSGRT
Ga0136617_106543291	3300017789	Polar Desert Sand	MSDPIPGRRTPISTDPIGIDPIGNDPLDMSDAPPKEGPGPNRTAGGFAANATTFFIAAVVLGVIMIGIVIYFSGRT
Ga0190275_105086432	3300018432	Soil	MTEPTPGRRTSISKDPIGVDPIGNDPLDMSDAPPKQGAGPNRTILGWTATATTFFIAAVVLGVIMVAVIVILTGRY
Ga0190275_131387321	3300018432	Soil	MTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0190269_111573892	3300018465	Soil	MTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPRQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAG
Ga0190268_102685342	3300018466	Soil	MTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATSFFIAAVVLGVIMVAVIAILAGRS
Ga0193614_11374893	3300018933	Soil	MTDEVPGRRTQISKDPIGIDPIGNDPLDFSDAPPKQGPGPNRSFLGWTATATSFFIAAVVLGVIMVVVIAIFAGRF
Ga0184641_13927962	3300019254	Groundwater Sediment	MTEPTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0184644_13162071	3300019269	Groundwater Sediment	MTEPTPGRPTSISKDPIGIDPIGNDPLDLSDAPPHQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0184642_11811791	3300019279	Groundwater Sediment	MTEPTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGDGPNRTFLGWTATATTFFIAAVVLAVIMVAVIAILAGRS
Ga0206356_108457501	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNSVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRQGEGPNRTLLGWTSTATTVFIAAVVLGLIMVIIILYLAGTF
Ga0247822_105204502	3300028592	Soil	MNEQIPGRRTPISTDPIGVDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAIIVYFVGQT
Ga0308205_10201191	3300030830	Soil	MAMTEPAPGRRTPISRDPIGVDPIGNDPLDLSDAPPRKDEGPNRTIGGWTATATTFFIAAVILGLIMVAIIVWLA
Ga0308205_10448722	3300030830	Soil	MTEPTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0308205_10498292	3300030830	Soil	MTESTPGRPTSISKDPIGIDPIGNDPLDLSDAPPKQGDGPNRTVLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0308205_10669831	3300030830	Soil	MTEPTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGDGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0308202_10295043	3300030902	Soil	MAMTEPVPGRQTTISKDPIGVDPIGNDPLDLSDAPPRKDAGPNRSVLGWTATATTFFIAAVILGVIMVAVIIYLANRT
Ga0308202_10295423	3300030902	Soil	MTEPTPGRRTSISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATSFFIAAVVLGVIMVAVIAILAGRS
Ga0308202_10448093	3300030902	Soil	MAMTEPAPGRRTPISRDPIGVDPIGNDPLDLSDAPPRKDEGPNRTLGGWTATATTFFIAAVILGLIMVAIIVWLANRT
Ga0308202_10884591	3300030902	Soil	MTEPVPGRRTSISKDPIGVDPIGNDPLDLSDAPPRKDAGPNQTVGGWTATATKFFIAAVVLGVIMGAIILYMANGT
Ga0308202_11166742	3300030902	Soil	MTEPTPGRRTTVSKDPIGVDPIGNDPLDLSDAPPHQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0308206_10514381	3300030903	Soil	MTEPTPGRRTTISKDPIGIDPIGNDPLDFSDAPPKQGDGPNRTVLGWTATATTFFIAAVVLGVI
Ga0308206_10701872	3300030903	Soil	MTEPTPGRRTSVSKDPIGVDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATSFFIAAVVLAVIMVAVIAILAGRS
Ga0308206_11630522	3300030903	Soil	MTEPTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTVLGWTATATTFFIAAVVLAVIMVAVIAILAGRS
Ga0102747_108183702	3300030959	Soil	MAAVAKERFMAMTEPVPGRQTTISKDPIGVDPIGNDPLDLSDAPPRKDAGPNRSVLGWTVTATTFFIAAVILGVIMVAVIIYLANRT
Ga0102760_100013291	3300031039	Soil	MAMTEPAPGRRTPISRDPIGVDPIGNDPLDLSDAPPRKDEGPNRTLGGWTATATTFFIAAVILGLIMVAIIVRALSEDKTSKTTVT
Ga0102760_100917822	3300031039	Soil	MAMTEPVPGRRTPISKDPIGVDPIGNDPLDLSDAPPRKDEGPNRTFLGWAGTATTFFISAVILGVIMVAIIIWLANRT
Ga0102760_109582832	3300031039	Soil	MTEPTPGRPTSISKDPIGVDPIGNDPLDLSDAPPHQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0308189_102847462	3300031058	Soil	MTEPTPGRPTSISKDPIGVDPIGNDPLDFSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0308201_100504923	3300031091	Soil	MTEPTPGRPTSISKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLAVIMVAVIAILAGRS
Ga0308201_102125092	3300031091	Soil	MTDNVPGRRTTVSKDPIGIDPIGNDPLDFSDAPPKQGPGPNRTFLGWTATATSFFIAAVVLGVIMVAIIAYFAGRF
Ga0308201_102788952	3300031091	Soil	MTEPTPGRRTSVSKDPIGIDPIGNDPLDLSDAPPRQGDGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0308204_100919832	3300031092	Soil	MAMTEPVPGRRTAISKDPIGVDPIGNDPLDLSDAPPRKDAGPNQSIGGWTATATRFFIAAVILGVIMVAIIVWMTNRM
Ga0308204_101293631	3300031092	Soil	MAMTEPAPGRRTPISRDPIGVDPIGNDPLDLSDAPPRKDEGPNRTIGGWTTTATTFFIAAVIL
Ga0308204_102984962	3300031092	Soil	MTEPTPGRRTTVSKDPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAIIAILAGRS
Ga0307410_118066531	3300031852	Rhizosphere	MTEPTPGRRTPISKDPIGVDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGR
Ga0307407_116067341	3300031903	Rhizosphere	MTEPTPGRRTTVSKDPIGVDPIGNDPLDLSDAPPKKGPGPNRTFLGWTATATTFFIAAVVLGVIMVAIIAILAGRS
Ga0307409_1011794341	3300031995	Rhizosphere	MNEQIPGRRTPISTDPIGVDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAIIVYFVG
Ga0307409_1012047631	3300031995	Rhizosphere	DPIGIDPIGNDPLDLSDAPPKQGPGPNRTFLGWTATATTFFIAAVVLGVIMVAVIAILAGRS
Ga0307415_1020045051	3300032126	Rhizosphere	MTEPTPGRRTPISKDPIGIDPIGNDPLDLSDAPPKQGEGPNRTFLGWTATATTFFIAAVVLGVIMVAIIAILAGRS
Ga0247830_112161761	3300033551	Soil	MTDQAPGRRTTISRDPIGVDPIGNDPLDLSDAPPKQGEGPNRTLLGWASTATGVFIAAVVLGVIMVAVIIYVATQS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073209

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences