NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F073213

Metagenome / Metatranscriptome Family F073213

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073213
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 85 residues
Representative Sequence MTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDRAKEEALRELRLYVVRLDDGRHFRFRGKELLADEGDEAASRNLSQLHLPA
Number of Associated Samples 95
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 89.17 %
% of genes near scaffold ends (potentially truncated) 22.50 %
% of genes from short scaffolds (< 2000 bps) 76.67 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (60.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(16.667 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.70%    β-sheet: 21.74%    Coil/Unstructured: 69.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF01741MscL 11.67
PF11306DUF3108 7.50
PF04338DUF481 1.67
PF05872HerA_C 1.67
PF01336tRNA_anti-codon 0.83
PF03853YjeF_N 0.83
PF02190LON_substr_bdg 0.83
PF05698Trigger_C 0.83
PF00694Aconitase_C 0.83
PF00330Aconitase 0.83
PF00574CLP_protease 0.83
PF06689zf-C4_ClpX 0.83
PF13472Lipase_GDSL_2 0.83
PF04519Bactofilin 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG1970Large-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 11.67
COG0433Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domainsReplication, recombination and repair [L] 1.67
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.67
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 1.67
COG3137Putative salt-induced outer membrane protein YdiYCell wall/membrane/envelope biogenesis [M] 1.67
COG0062NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domainNucleotide transport and metabolism [F] 0.83
COG0544FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)Posttranslational modification, protein turnover, chaperones [O] 0.83
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 0.83
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms60.00 %
UnclassifiedrootN/A40.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000891|JGI10214J12806_10995248All Organisms → cellular organisms → Bacteria → Acidobacteria2414Open in IMG/M
3300003465|P52013CM_1068406Not Available775Open in IMG/M
3300004156|Ga0062589_100528314Not Available1003Open in IMG/M
3300004463|Ga0063356_100112050All Organisms → cellular organisms → Bacteria → Proteobacteria2998Open in IMG/M
3300004463|Ga0063356_100139488All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2736Open in IMG/M
3300004463|Ga0063356_100213821All Organisms → cellular organisms → Bacteria → Acidobacteria2291Open in IMG/M
3300004463|Ga0063356_104222241All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300004798|Ga0058859_10043538Not Available539Open in IMG/M
3300004801|Ga0058860_12028142Not Available622Open in IMG/M
3300005093|Ga0062594_101986984Not Available621Open in IMG/M
3300005183|Ga0068993_10068545Not Available1075Open in IMG/M
3300005288|Ga0065714_10209527All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300005290|Ga0065712_10336181Not Available807Open in IMG/M
3300005328|Ga0070676_10187083All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1350Open in IMG/M
3300005331|Ga0070670_100006460All Organisms → cellular organisms → Bacteria9927Open in IMG/M
3300005331|Ga0070670_101070313Not Available735Open in IMG/M
3300005332|Ga0066388_100074126All Organisms → cellular organisms → Bacteria → Proteobacteria3730Open in IMG/M
3300005340|Ga0070689_100094067All Organisms → cellular organisms → Bacteria → Acidobacteria2366Open in IMG/M
3300005340|Ga0070689_101190457All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300005347|Ga0070668_100778185All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium849Open in IMG/M
3300005353|Ga0070669_100256478All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300005354|Ga0070675_100228189All Organisms → cellular organisms → Bacteria1624Open in IMG/M
3300005356|Ga0070674_100146306All Organisms → cellular organisms → Bacteria1779Open in IMG/M
3300005365|Ga0070688_101471258Not Available554Open in IMG/M
3300005440|Ga0070705_100133230All Organisms → cellular organisms → Bacteria → Acidobacteria1624Open in IMG/M
3300005564|Ga0070664_100195078Not Available1805Open in IMG/M
3300005615|Ga0070702_101067491All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300005764|Ga0066903_100992303All Organisms → cellular organisms → Bacteria → Acidobacteria1534Open in IMG/M
3300005764|Ga0066903_103550692All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300005829|Ga0074479_11061108All Organisms → cellular organisms → Bacteria17411Open in IMG/M
3300006844|Ga0075428_102166148Not Available574Open in IMG/M
3300006847|Ga0075431_101175776Not Available730Open in IMG/M
3300006876|Ga0079217_10673045Not Available689Open in IMG/M
3300006881|Ga0068865_100248024All Organisms → cellular organisms → Bacteria → Acidobacteria1404Open in IMG/M
3300006881|Ga0068865_101859335Not Available545Open in IMG/M
3300006894|Ga0079215_11154503Not Available585Open in IMG/M
3300007004|Ga0079218_10005482All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5636Open in IMG/M
3300007004|Ga0079218_10029543All Organisms → cellular organisms → Bacteria → Acidobacteria3151Open in IMG/M
3300007004|Ga0079218_10090476All Organisms → cellular organisms → Bacteria → Acidobacteria2067Open in IMG/M
3300009011|Ga0105251_10334291All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300009094|Ga0111539_10104518All Organisms → cellular organisms → Bacteria3323Open in IMG/M
3300009094|Ga0111539_11905298Not Available689Open in IMG/M
3300009100|Ga0075418_10992259Not Available909Open in IMG/M
3300009100|Ga0075418_11010033All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300009156|Ga0111538_10056647All Organisms → cellular organisms → Bacteria → Proteobacteria5006Open in IMG/M
3300009156|Ga0111538_10290605All Organisms → cellular organisms → Bacteria2069Open in IMG/M
3300009156|Ga0111538_10644026All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1344Open in IMG/M
3300009176|Ga0105242_10021987All Organisms → cellular organisms → Bacteria5013Open in IMG/M
3300009176|Ga0105242_12063940All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300009235|Ga0103857_10073048Not Available674Open in IMG/M
3300010166|Ga0126306_11149253All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300010399|Ga0134127_11009351Not Available892Open in IMG/M
3300011119|Ga0105246_11880903All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300011445|Ga0137427_10417380Not Available557Open in IMG/M
3300012212|Ga0150985_111223789Not Available596Open in IMG/M
3300012905|Ga0157296_10063661All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300012906|Ga0157295_10349401Not Available535Open in IMG/M
3300012913|Ga0157298_10206175Not Available635Open in IMG/M
3300012971|Ga0126369_10154705Not Available2160Open in IMG/M
3300014271|Ga0075326_1299284All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300014325|Ga0163163_10014146All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7329Open in IMG/M
3300014326|Ga0157380_10393763All Organisms → cellular organisms → Bacteria1312Open in IMG/M
3300015371|Ga0132258_10309057All Organisms → cellular organisms → Bacteria3892Open in IMG/M
3300015371|Ga0132258_12308843Not Available1349Open in IMG/M
3300015374|Ga0132255_101566489All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300018083|Ga0184628_10625227Not Available543Open in IMG/M
3300018469|Ga0190270_10111920All Organisms → cellular organisms → Bacteria2122Open in IMG/M
3300018476|Ga0190274_10012014All Organisms → cellular organisms → Bacteria5415Open in IMG/M
3300018481|Ga0190271_10292420Not Available1686Open in IMG/M
3300019361|Ga0173482_10150825All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300020064|Ga0180107_1013038All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300020065|Ga0180113_1019676All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300025580|Ga0210138_1160650Not Available552Open in IMG/M
3300025903|Ga0207680_10157276All Organisms → cellular organisms → Bacteria1521Open in IMG/M
3300025903|Ga0207680_10601310All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300025908|Ga0207643_10334112Not Available949Open in IMG/M
3300025923|Ga0207681_10145604All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. GV0101770Open in IMG/M
3300025925|Ga0207650_10056535All Organisms → cellular organisms → Bacteria2916Open in IMG/M
3300025925|Ga0207650_10361887All Organisms → cellular organisms → Bacteria → Acidobacteria1195Open in IMG/M
3300025926|Ga0207659_10000181All Organisms → cellular organisms → Bacteria37557Open in IMG/M
3300025926|Ga0207659_10136146All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1901Open in IMG/M
3300025926|Ga0207659_11915329Not Available502Open in IMG/M
3300025936|Ga0207670_10768811Not Available801Open in IMG/M
3300025937|Ga0207669_10011283All Organisms → cellular organisms → Bacteria4342Open in IMG/M
3300025938|Ga0207704_10492407Not Available986Open in IMG/M
3300025940|Ga0207691_10224150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1629Open in IMG/M
3300025940|Ga0207691_11649779Not Available520Open in IMG/M
3300025960|Ga0207651_10352388Not Available1240Open in IMG/M
3300026075|Ga0207708_10384848All Organisms → cellular organisms → Bacteria1157Open in IMG/M
3300026118|Ga0207675_100274927Not Available1635Open in IMG/M
3300026121|Ga0207683_12177170Not Available503Open in IMG/M
3300027886|Ga0209486_10002825All Organisms → cellular organisms → Bacteria7371Open in IMG/M
3300027886|Ga0209486_10210977All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300027886|Ga0209486_10617282All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300027907|Ga0207428_10022770All Organisms → cellular organisms → Bacteria5281Open in IMG/M
3300027907|Ga0207428_10082690All Organisms → cellular organisms → Bacteria → Acidobacteria2505Open in IMG/M
3300028379|Ga0268266_10214707All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300030574|Ga0247648_1111977Not Available626Open in IMG/M
3300031538|Ga0310888_10001906All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6371Open in IMG/M
3300031547|Ga0310887_10037618All Organisms → cellular organisms → Bacteria → Acidobacteria2082Open in IMG/M
3300031548|Ga0307408_102323384Not Available520Open in IMG/M
3300031716|Ga0310813_10445322All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300031908|Ga0310900_10894391All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300031944|Ga0310884_10348165Not Available839Open in IMG/M
3300032012|Ga0310902_10318424Not Available964Open in IMG/M
3300032013|Ga0310906_10054972All Organisms → cellular organisms → Bacteria → Proteobacteria1984Open in IMG/M
3300032017|Ga0310899_10138580Not Available1026Open in IMG/M
3300032075|Ga0310890_10573453Not Available869Open in IMG/M
3300032122|Ga0310895_10511678All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300032211|Ga0310896_10043108All Organisms → cellular organisms → Bacteria → Acidobacteria1780Open in IMG/M
3300034659|Ga0314780_198988Not Available522Open in IMG/M
3300034661|Ga0314782_126298All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300034663|Ga0314784_062178All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300034664|Ga0314786_082559Not Available664Open in IMG/M
3300034664|Ga0314786_108968Not Available605Open in IMG/M
3300034664|Ga0314786_113466Not Available597Open in IMG/M
3300034665|Ga0314787_053628Not Available669Open in IMG/M
3300034670|Ga0314795_075435All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300034671|Ga0314796_055593All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300034675|Ga0314800_068518Not Available535Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil16.67%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere9.17%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere7.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil6.67%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.33%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.50%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.50%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.50%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.67%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.67%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated1.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.67%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water0.83%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.83%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.83%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.83%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil0.83%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300003465Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sampleEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004801Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005288Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009235Microbial communities of water from Amazon river, Brazil - RCM10EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020064Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020065Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025580Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300030574Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300034659Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034663Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034664Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034670Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034671Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034675Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10214J12806_1099524833300000891SoilMNRLHIGGKVQIISAIPGFHLQKGVVASITEPFVVGEQAKEEALRELRLYVVRLDDGRHFRFRGKELLAREANEEAASEPTQVHQYTH*
P52013CM_106840633300003465Ore Pile And Mine Drainage Contaminated SoilMSRLHVGGKVQITSDIPGFHLQKGTIAEITQPFVSGEQAKEEALRELRLYLVRLDDGRHFRFRGKELLPSETAPTSTR
Ga0062589_10052831423300004156SoilMTKLRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEETEFAHALSQVHMPAHS*
Ga0063356_10011205053300004463Arabidopsis Thaliana RhizosphereMVKLHIGGKVQIISAIPGFHLQKGIVAAITEPFVSGEQAKEEALRELRLYVVRLDDGRHFRFRGKELLPHEENDLTPEVSSVRIPAHR*
Ga0063356_10013948843300004463Arabidopsis Thaliana RhizosphereMSRLRVGGKVQIVSAIPGFHLQKGTVAEITEPFVSGEKAKEEALRELRLYVVRLDDGRHFRFRGKELLPNEDNVLEMPSANAGQRPHY*
Ga0063356_10021382123300004463Arabidopsis Thaliana RhizosphereMTRLQVGGKVQIVSAIPGFHLQKGIVAAITEPFVAGDRAREEALRELRLYVVRLNDGRHFRFRGKELLADEGDVRAHEPSRIHQTA*
Ga0063356_10422224113300004463Arabidopsis Thaliana RhizosphereMTKLHVGGKVQIISAIPGFHLQKGIVTAITEPFVSGEKAREEALRELRLYAVQLDDGRHFRFRGKDLLPHENELAHNFTPVEVPAHR*
Ga0058859_1004353813300004798Host-AssociatedMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDTGGHA
Ga0058860_1202814223300004801Host-AssociatedMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDREKEEALRELRLYVVRLDDGRHFRFRGKELSADEGDAVASPGLSRLHLPA*
Ga0062594_10198698413300005093SoilMTKLRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQVHVPAHS*
Ga0068993_1006854523300005183Natural And Restored WetlandsMTKLHVGGKVQIISAIPGFHLQSGIVAEITEPFVAGENAKEEALRELRLYVVRLDDGRHFRFRGKELLPHEDNVVEMHSRLNPLRQRPHS*
Ga0065714_1020952723300005288Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDTGGHAPRPLHRLA*
Ga0065712_1033618123300005290Miscanthus RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVSGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDVVQLQANPSEVTPLLKASLRRTG*
Ga0070676_1018708323300005328Miscanthus RhizosphereMTKLHIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEETESAHALSQVHMPAHS*
Ga0070670_100006460103300005331Switchgrass RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDRAKEEALRELRLYVVRLDDGRHFRFRGKELLADEGDEAASRNLSQLHLPA*
Ga0070670_10107031333300005331Switchgrass RhizosphereMTKLRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEE
Ga0066388_10007412633300005332Tropical Forest SoilMARLQIGEKVQIISAIPGFHLQEGIVASITEPFVAGERAREEALLELRLYVVRLNDGRHFRFRGKELLIRGEKVPVSRETSPIHPNL*
Ga0070689_10009406753300005340Switchgrass RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVSGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDV
Ga0070689_10119045723300005340Switchgrass RhizosphereMGRLHVGGKVQITSDIPGFHLQKGTIAEITQPFVSGEQAKEEALRELRLYVVRLDDGRHFRFRGKELLPSETASTSTRLAG*
Ga0070668_10077818523300005347Switchgrass RhizosphereMTKLHIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQVHVPAHS*
Ga0070669_10025647833300005353Switchgrass RhizosphereIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQVHVPAHS*
Ga0070675_10022818923300005354Miscanthus RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVSGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDVVQLQANPSEVTPLVKASLRRTG*
Ga0070674_10014630623300005356Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGTVSAITEPFVTGDRAREEALRELRLYVVRLDDGRHFRFRGKELTPDEGDDVASHGLRQLHQPA*
Ga0070688_10147125823300005365Switchgrass RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVSGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDVVQLQA
Ga0070705_10013323023300005440Corn, Switchgrass And Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGDAVASPGLSRLHLPA*
Ga0070664_10019507833300005564Corn RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVSGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDVVQLQANPAEVTPLLKASLRRTG*
Ga0070702_10106749123300005615Corn, Switchgrass And Miscanthus RhizosphereMSKLKVGGRVQIVSSIPGFYLSNGVIIGITRPFVVDEQSREDALRELRLYQVRLEDGRHFRFRGKELMAQEVGVATA*
Ga0066903_10099230313300005764Tropical Forest SoilMTKLRVGARVQVTSAIPGFHLQKGVIASITMPFVTGEQREEALRELRLYVVELEDGRHFRFRGKELQPQEVDRSSPFVVVAHQALHR*
Ga0066903_10355069233300005764Tropical Forest SoilMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDRGREEALRELRLYVVRLDDGRHFRFRGKELSADEGNDAPSHDFSHLHQPA*
Ga0074479_1106110833300005829Sediment (Intertidal)MSKLNVGGKVQVISAIPGFHLQKGVVASITEPFVVDERTREDALRELRLYVVQLEDGRHFRFRGKELQPQEDAGISRHRNNNNCVSV*
Ga0075428_10216614823300006844Populus RhizosphereMSRLRVGGKVQIVSAIPGFHLQKGTVAEITEPYVSGERAKEEALRELRLYVVRLDDGRHFRFRGKELLPREEDTVLEMPS
Ga0075431_10117577613300006847Populus RhizosphereQIVSAIPGFHLQKGTVAEITEPFVSGEKAKEEALRELRLYVVRLDDGRHFRFRGKELLPSEDNVLEMPSSNARQRPHY*
Ga0079217_1067304533300006876Agricultural SoilMTRLQVGGKVQIVSAIPGFHLQKGIVAAITEPFVAGDRAREDALRELRLYVVRLNDGRHFRFRGKELLA
Ga0068865_10024802413300006881Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDREKEEALRELRLYVVRLDDGRHFRFRGKELLADEAGDAPSHDLSHLHQPA*
Ga0068865_10185933523300006881Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALGELRLYVVRVDDGRHFSFRGKELSADEGEDTGGHAPRPLHRLA*
Ga0079215_1115450323300006894Agricultural SoilMMKLHIGGKVQIISAIPGFHLQKGVVAAITEPFVSGEQAKEEALRELRLYVVRLDDGRHFRFRGKELLPHEENDLTPDLSSVRIPAHR*
Ga0079218_1000548223300007004Agricultural SoilMTRLQVGGKVQIVSAIPGFHLQKGIVAAITEPFVAGDRAREEALRELRLYVVRLNDGRHFRFRGKELLADEGDARAHEPSPIHQTA*
Ga0079218_1002954353300007004Agricultural SoilMTRLHIGGKVQIVSAIPGFHLQKGVVAAITEPFVAGENAREEALRELRLYVVRLDDGRHFRFRGKELLADEGDATMPSPSLSRLHQPA*
Ga0079218_1009047643300007004Agricultural SoilMTRLHIGGKVQIVSAIPGFHLQKGVVAAITEPFVSDERAREEALRELRLYIVRLDDGRHFRFRGKELLADEGAESVSGPSLSR
Ga0105251_1033429123300009011Switchgrass RhizosphereHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDREKEEALRELRLYVVRLDDGRHFRFRGKELSADEGDAVASPGLSRLHLPA*
Ga0111539_1010451823300009094Populus RhizosphereMSRLRVGGKVQIVSAIPGFHLQKGTVAEITEPYVSGERAKEEALRELRLYVVRLDDGRHFRFRGKELLPREEDTVLEMPSSNQSQRPHY*
Ga0111539_1190529823300009094Populus RhizosphereMTKLHIGGKVQIISAIPGFHLQSGTVSAITEPFVSGEGAKEEALRELRLYVVRLDDGRHFRFRGKELLPREDNPPPRDLSQVHVPA*
Ga0075418_1099225933300009100Populus RhizosphereMTKLRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPHEDS
Ga0075418_1101003323300009100Populus RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGIVSAITEPFVTGDSAREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDAGGHAPRPLHRLA*
Ga0111538_1005664713300009156Populus RhizosphereRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLLPQEETEFAHALSQVHVPAHS*
Ga0111538_1029060533300009156Populus RhizosphereMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDAGGHAPRPLHRLA*
Ga0111538_1064402633300009156Populus RhizosphereMTKLHIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEETEFAHALSQVHMPAHS*
Ga0105242_1002198743300009176Miscanthus RhizosphereMSKLQVGRKVQITSSIPEFYLRKGTISAITKPFVATEQNREDALRELRLYDVRLDDGRHFRFRGKELMAHDDLR*
Ga0105242_1206394023300009176Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHPKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDTGGHAPRPLHRLA*
Ga0103857_1007304823300009235River WaterMMTNLTVGKTVQVISSIPGFYLRKGVIAAIARPFVADDRNREDALRELRLYDVRLEDGRHFRFRGKELLPCDAF*
Ga0126306_1114925323300010166Serpentine SoilMTRLQIGGKVQVVSAIPGFHMLKGIVSAITEPFVSGEGAREEALRELRLYVVHLEDGRHFRFRGKELLPAESEQRSSMSLQQQWHRPA*
Ga0134127_1100935123300010399Terrestrial SoilMTKLHIGGKVQIISAIPGFHLQKGIVAAITEPFVSGEQAKEEALRELRLYVVRLDDGRHFRFRGKELLPHEESDLTADLNPVQIPAHR*
Ga0105246_1188090323300011119Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDREKEEALRELRLYVVRLDDGRHFRFRGKELLADEGDEAASRNLSQLHLPA*
Ga0137427_1041738023300011445SoilMTRLRIGGKVQIVSAIPGFHLQKGVVAAITEPFVAGESAREEALRELRLYVVRLDDGRHFRFRGKELLADEGEATVPSPSLSRLHQPA*
Ga0150985_11122378913300012212Avena Fatua RhizosphereMSKLQIGRKVQITSSIPEFYLRKGTISAITKPFVATEQNREDALRELRLYDVRLDDGRHFRFRGKELMAHDDFS*
Ga0157296_1006366123300012905SoilVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDTGGHAPRPLHRLA*
Ga0157295_1034940113300012906SoilMTRLHIGGKVQVVSAIPGFHLQKGIVSAITEPFVAGDREREEALRELRLYVVRLDDGRHFRLRGKDLSAEGVEETSRRLA*
Ga0157298_1020617513300012913SoilMTKLRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLCPQEKTEFTHALSQDHVPAHS*
Ga0126369_1015470513300012971Tropical Forest SoilTHGLGGLMSRLYVGGKVQVTSAIPGFHLQRGTIAEITEPFVSGEKAKDEALRELRLYVVRLDDGRHFRFRGKELLPREEEGIIDISSARQRHRPAC*
Ga0075326_129928413300014271Natural And Restored WetlandsMARLHIGERVQIISAIPGFHLQEGIVASITEPFVSGESAREEALLELRLYVVRLNDGRHFRFRGKELLPRSENTGISREGGPLHSVQG*
Ga0163163_1001414623300014325Switchgrass RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDRAKEEALRELRLYVVRLDDGRHFRFRGKELSADEGDAVASPGLSRLHLPA*
Ga0157380_1039376323300014326Switchgrass RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGTVSAITEPFVTGDGAREEALRELRLYVVRLDDGRHFRFRGKELTPDEGDDVASHGLRQLHQPA*
Ga0132258_1030905743300015371Arabidopsis RhizosphereMTKLRVGARVQVISAIPGFHLQKGVIASITVPFVTGEQREEALRELRLYVVELEDGRHFRFRGKELQFQEEEQTASHVFAVHHAAQR*
Ga0132258_1230884323300015371Arabidopsis RhizosphereMTRLQIGGKVQVVSAIPGFHLQKGIVSAITEPFVAGDRAREEALHELRLYVVRLDDGRHFRFRGKELSADEGEDTAAQLHRPA*
Ga0132255_10156648923300015374Arabidopsis RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGTVAAITEPFVAGDRAREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDAGGHAPRPLHRLA*
Ga0184628_1062522723300018083Groundwater SedimentMSKLQVGRKVQITSSIPEFYLRKGIISGITKPFVADEQSREDALRELRLYDVRLDDGRHFRFRGKELMAHEDRAFSTR
Ga0190270_1011192023300018469SoilMTRLHIGGKVQIVSAIPGFHLQKGVVAAITEPFVAGESAREEALRELRLYVVRLDDGRHFRFRGKELLADEGEATVPSPSLSRLHQPA
Ga0190274_1001201473300018476SoilMSKLQVGIKVQITSSIPEFYLRKGIISGITKPFVADEQSREDALRELRLYDVRLDDGRHFRFRGKELVAHQDLAASAR
Ga0190271_1029242033300018481SoilMTRLNIGGKVQIVSAIPGFHLQKGTVAAITEPFVTGERAREEALRELRLYVVRLDDGRHFRFRGKELLADEGGDRPSQSLTQLHQPA
Ga0173482_1015082523300019361SoilMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDAGGHAPRPLHRLA
Ga0180107_101303823300020064Groundwater SedimentMSKLQVGRKVQVVSSIPEFYLRKGIISGITKPFVADEQSREDALRELRLYDVRLDDGRHFRFRGKELMAHEDRAFSTR
Ga0180113_101967623300020065Groundwater SedimentMTRLRIGGKVQIVSAIPGFHLQKGVVAAITEPFVAGENAREEALRELRLYVVRLDDGRHFRFRGKELLADEGEATVPSPSLSRLHQPA
Ga0210138_116065023300025580Natural And Restored WetlandsMTKLHVGGKVQIISAIPGFHLQSGIVAEITEPFVAGENAKEEALRELRLYVVRLDDGRHFRFRGKELLPHEDNVVEMHSRLNPLRQRPHS
Ga0207680_1015727633300025903Switchgrass RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDREKEEALRELRLYVVRLDDGRHFRFRGKELSADEGDAVASPGLSRLHLPA
Ga0207680_1060131023300025903Switchgrass RhizosphereMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDTGGHAPRPLHRLA
Ga0207643_1033411213300025908Miscanthus RhizosphereMTKLHIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQVHVPAHS
Ga0207681_1014560433300025923Switchgrass RhizosphereKLHIGGRVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQVHVPAHS
Ga0207650_1005653533300025925Switchgrass RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDRAKEEALRELRLYVVRLDDGRHFRFRGKELLADEGDEAASRNLSQLHLPA
Ga0207650_1036188733300025925Switchgrass RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVPGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDVVQLQANPSEVTPLLKASLRR
Ga0207659_10000181173300025926Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGTVSAITEPFVTGDGAREEALRELRLYVVRLDDGRHFRFRGKELTPDEGDDVASHGLRQLHQPA
Ga0207659_1013614623300025926Miscanthus RhizosphereMTKLRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLCPQEETEFTHALSQDHVPAHS
Ga0207659_1191532913300025926Miscanthus RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVSGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDVVQLQANP
Ga0207670_1076881133300025936Switchgrass RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVSGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDVVQLQANPAEVTPLLKASLRRTG
Ga0207669_1001128333300025937Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGTVSAITEPFVTGDRAREEALRELRLYVVRLDDGRHFRFRGKELTPDEGDDVASHGLRQLHQPA
Ga0207704_1049240713300025938Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGIVAAITEPFVAGDREKEEALRELRLYVVRLDDGRHFRFRGKELSADEGDAVASP
Ga0207691_1022415033300025940Miscanthus RhizosphereMTKLRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEETEFAHALSQVHMPAHS
Ga0207691_1164977913300025940Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLQKGTVSAITEPFVTGDGAREEALRELRLYVVRLDDGRHFRFRGKELTPDEGDDVASHGLRQLHQ
Ga0207651_1035238833300025960Switchgrass RhizosphereMSRLHVGGKVQIISAIPGFHLQMGIVTEITEPFVSGAQAREEALRELRLYVVRLDDGRHFRFRGKELLALEGQDVVQLQANPSEVTPLLKASLRRTG
Ga0207708_1038484833300026075Corn, Switchgrass And Miscanthus RhizosphereMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELTPDEGDDIASHNLRQLHQPA
Ga0207675_10027492723300026118Switchgrass RhizosphereKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELTPDEGDDVASHGLRQLHQPA
Ga0207683_1217717023300026121Miscanthus RhizosphereGMTKLHIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEETEFAHALSQVHMPAHS
Ga0209486_1000282593300027886Agricultural SoilMTRLQVGGKVQIVSAIPGFHLQKGIVAAITEPFVAGDRAREEALRELRLYVVRLNDGRHFRFRGKELLADEGDARAHEPSPIHQTA
Ga0209486_1021097723300027886Agricultural SoilMTRLHIGGKVQIVSAIPGFHLQKGVVAAITEPFVAGENAREEALRELRLYVVRLDDGRHFRFRGKELLADEGDATMPSPSLSRLHQPA
Ga0209486_1061728223300027886Agricultural SoilMTRLHIGGKVQIVSAIPGFHLQKGVVAAITEPFVSDERAREEALRELRLYIVRLDDGRHFRFRGKELLADEGAESVSGPSLSRLHQPA
Ga0207428_1002277033300027907Populus RhizosphereMTKLRIGGKVQIISAMPGFYLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLLPQEETEFAHALSQVHVPAHS
Ga0207428_1008269043300027907Populus RhizosphereMSRLRVGGKVQIVSAIPGFHLQKGTVAEITEPYVSGERAKEEALRELRLYVVRLDDGRHFRFRGKELLPREEDTVLEMPSSNQSQRPHY
Ga0268266_1021470723300028379Switchgrass RhizosphereMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELTPDEGDDVASHGLRQLHQPA
Ga0247648_111197723300030574SoilMTKLRIGGKVQVTSAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKELLPHEDSEFTHALNQVQVPAHS
Ga0310888_1000190683300031538SoilMTKLHIGGRVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQAHVPAHS
Ga0310887_1003761853300031547SoilMTKLHIGGRVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQVHVPAHS
Ga0307408_10232338423300031548RhizosphereMTRLQIGGKVQVVSAIPGFHLQMGIVSAITEPFVSGEGAREEALRELRLYVVQLEDGRHFRFRGKELLPAESEHRSGMPQQWHRPA
Ga0310813_1044532213300031716SoilREDLMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDTGGHAPRPLHRLA
Ga0310900_1089439123300031908SoilMTKLRIGGKVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQVHVPAHS
Ga0310884_1034816513300031944SoilMTKLHIGGRVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQVH
Ga0310902_1031842413300032012SoilMTKLHIGGRVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSE
Ga0310906_1005497213300032013SoilMTKLRIGGKVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQAHVPAHS
Ga0310899_1013858033300032017SoilMTKLRIGGKVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEETEFAHALSQVHMPAHS
Ga0310890_1057345323300032075SoilMSRLRVGGKVQIVSAIPGFHLQKGTVAEITEPYVSGERAKEEALRELRLYVVRLDDGRHFRFRGKELLPRDEDTVLEMPSSNQRQHPHF
Ga0310895_1051167813300032122SoilRKSSSVREDLMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDAGGHAPRPLHRLA
Ga0310896_1004310853300032211SoilMTKLHIGGRVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQDHVPAHS
Ga0314780_198988_232_4563300034659SoilMSKLQVGRKVQITSSIPEFYLRKGIISGITKPFVADEQSREDALRELRLYDVRLDDGRHFRFRGKELVAHEPQM
Ga0314782_126298_141_4073300034661SoilMTRLHIGGKVQVVSAIPGFHLQKGIVSAITEPFVTGDQAREEALRELRLYVVRLDDGRHFRFRGKELTADEAEEEIASHGLSHLHQPA
Ga0314784_062178_216_4793300034663SoilMTRLHIGGKVQVVSAIPGFHLQKGIVSAITEPFVTGDQAREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDAGGHAPRPLHRLA
Ga0314786_082559_111_3473300034664SoilMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKDLVPCDTRFQGPR
Ga0314786_108968_302_5683300034664SoilMTKLRIGGKVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKELCPHEDSEFTYALSQVHVPAHS
Ga0314786_113466_317_5413300034664SoilMSKLQVGRKVQITSSIPEFYLRKGTIAGITKPFVATEQSREDALRELRLYDVRLDDGRHFRFRGKELEAHEELR
Ga0314787_053628_202_4503300034665SoilMTRLKIGGKVQIISAIPGFHLQKGIVAAITEPFVVGQQAKDEALRELRLYVVRLDDGRHFRFRGKELLPSETTASTSTRLAG
Ga0314795_075435_293_5443300034670SoilMTRLHIGGKVQVVSAIPGFHLKKGIVSAITEPFVAGDHEREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDTAAQLHRPA
Ga0314796_055593_146_4093300034671SoilMTRLHIGGKVQVVSAIPGFHLQKGIVSAITEPFVAGDREREEALRELRLYVVRLDDGRHFRFRGKELSADEGEDAGGHAPRPLHRLA
Ga0314800_068518_2_2443300034675SoilMTKLRIGGKVQIISAMPGFHLQTGIVAAITEPFVSDEKAKEEALRELRLYVVRLDDGRHFRFRGKDLFPQEDSEFTHALSQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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