Metagenome / Metatranscriptome Family F073261

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073261
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	75 residues
Representative Sequence	MPRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQSQSGMSMSAMMKHIGSKSRKQKQKGPTDDEKSKERLDAMESANKK
Number of Associated Samples	73
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.65 %
% of genes near scaffold ends (potentially truncated)	27.50 %
% of genes from short scaffolds (< 2000 bps)	70.00 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (32.500 % of family members)
Environment Ontology (ENVO)	Unclassified (67.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (75.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00145	DNA_methylase	7.50
PF13392	HNH_3	4.17
PF01555	N6_N4_Mtase	2.50
PF02839	CBM_5_12	2.50
PF08707	PriCT_2	0.83
PF01391	Collagen	0.83
PF02086	MethyltransfD12	0.83
PF05869	Dam	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	7.50
COG0863	DNA modification methylase	Replication, recombination and repair [L]	2.50
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	2.50
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	2.50
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.83
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
All Organisms	root	All Organisms	25.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
Viruses	superkingdom	All Organisms → Viruses	21.67 %
cellular organisms	root	All Organisms → cellular organisms	4.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
Varidnaviria	clade	All Organisms → Viruses → Varidnaviria	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.17 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
Bamfordvirae	kingdom	All Organisms → Viruses → Varidnaviria → Bamfordvirae	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.33 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
Preplasmiviricota	phylum	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.67 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
Maveriviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.67 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
Priklausovirales	order	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.67 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.83 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.83 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
Lavidaviridae	family	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	1.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Enterococcus phage dArtagnan	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Enterococcus phage dArtagnan	0.83 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
unclassified Lavidaviridae	no rank	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	1.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Enterococcus phage dArtagnan	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Enterococcus phage dArtagnan	0.83 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.17 %
Yellowstone Lake virophage 5	species	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	10.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.00 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	1.67 %
Dishui Lake virophage 2	species	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Dishui Lake virophage 2	0.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Enterococcus phage dArtagnan	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Enterococcus phage dArtagnan	0.83 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002091\|JGI24028J26656_1000775	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	8689	Open in IMG/M
3300002091\|JGI24028J26656_1001534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	5048	Open in IMG/M
3300002091\|JGI24028J26656_1006162	Not Available	1741	Open in IMG/M
3300002092\|JGI24218J26658_1012533	Not Available	1334	Open in IMG/M
3300002098\|JGI24219J26650_1017595	Not Available	1012	Open in IMG/M
3300002098\|JGI24219J26650_1028448	Not Available	697	Open in IMG/M
3300002098\|JGI24219J26650_1038182	Not Available	563	Open in IMG/M
3300002301\|JGI24891J29808_1003174	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300002307\|JGI24890J29729_1025992	Not Available	1317	Open in IMG/M
3300002307\|JGI24890J29729_1036579	Not Available	996	Open in IMG/M
3300002307\|JGI24890J29729_1042975	Not Available	872	Open in IMG/M
3300002408\|B570J29032_109146437	Not Available	611	Open in IMG/M
3300003277\|JGI25908J49247_10112615	Not Available	649	Open in IMG/M
3300003394\|JGI25907J50239_1091528	Not Available	595	Open in IMG/M
3300004686\|Ga0065173_1020194	Not Available	1221	Open in IMG/M
3300004771\|Ga0007797_1049241	All Organisms → Viruses → Predicted Viral	1131	Open in IMG/M
3300004771\|Ga0007797_1083901	Not Available	835	Open in IMG/M
3300004771\|Ga0007797_1098948	Not Available	758	Open in IMG/M
3300004771\|Ga0007797_1193385	Not Available	513	Open in IMG/M
3300004773\|Ga0007795_10016403	All Organisms → Viruses → Predicted Viral	2578	Open in IMG/M
3300004773\|Ga0007795_10185192	Not Available	580	Open in IMG/M
3300004774\|Ga0007794_10251196	Not Available	525	Open in IMG/M
3300004774\|Ga0007794_10267027	Not Available	507	Open in IMG/M
3300004805\|Ga0007792_10109768	Not Available	843	Open in IMG/M
3300004805\|Ga0007792_10146784	Not Available	724	Open in IMG/M
3300005581\|Ga0049081_10049177	Not Available	1598	Open in IMG/M
3300006803\|Ga0075467_10421361	Not Available	693	Open in IMG/M
3300006805\|Ga0075464_10008614	Not Available	4967	Open in IMG/M
3300006805\|Ga0075464_10017185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	3687	Open in IMG/M
3300006805\|Ga0075464_10309517	Not Available	951	Open in IMG/M
3300006805\|Ga0075464_10453735	Not Available	782	Open in IMG/M
3300006805\|Ga0075464_10857255	Not Available	566	Open in IMG/M
3300007363\|Ga0075458_10159551	Not Available	697	Open in IMG/M
3300007661\|Ga0102866_1205809	Not Available	507	Open in IMG/M
3300007708\|Ga0102859_1000199	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	13354	Open in IMG/M
3300007973\|Ga0105746_1307149	Not Available	550	Open in IMG/M
3300008055\|Ga0108970_10067352	Not Available	1133	Open in IMG/M
3300008450\|Ga0114880_1279499	Not Available	500	Open in IMG/M
3300009068\|Ga0114973_10001099	Not Available	20293	Open in IMG/M
3300009151\|Ga0114962_10004323	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	11319	Open in IMG/M
3300009151\|Ga0114962_10020416	All Organisms → Viruses → Predicted Viral	4691	Open in IMG/M
3300009155\|Ga0114968_10001469	Not Available	18084	Open in IMG/M
3300009165\|Ga0105102_10471258	Not Available	677	Open in IMG/M
3300009169\|Ga0105097_10240718	Not Available	997	Open in IMG/M
3300010885\|Ga0133913_10050625	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	11152	Open in IMG/M
3300010885\|Ga0133913_10082555	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	8619	Open in IMG/M
3300011114\|Ga0151515_10336	Not Available	21187	Open in IMG/M
3300011114\|Ga0151515_10522	Not Available	16728	Open in IMG/M
3300011114\|Ga0151515_10862	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	12246	Open in IMG/M
3300011184\|Ga0136709_1011881	Not Available	1230	Open in IMG/M
3300011335\|Ga0153698_1925	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	10381	Open in IMG/M
3300011336\|Ga0153703_1218	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Dishui Lake virophage 2	21238	Open in IMG/M
3300012774\|Ga0138283_1222505	Not Available	1735	Open in IMG/M
3300013285\|Ga0136642_1067396	Not Available	955	Open in IMG/M
3300013286\|Ga0136641_1006330	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Enterococcus phage dArtagnan	4230	Open in IMG/M
3300013372\|Ga0177922_10570528	Not Available	589	Open in IMG/M
3300013372\|Ga0177922_11231263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	7013	Open in IMG/M
3300015050\|Ga0181338_1001500	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	4198	Open in IMG/M
3300015050\|Ga0181338_1002235	Not Available	3401	Open in IMG/M
3300015050\|Ga0181338_1003104	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	2896	Open in IMG/M
3300015050\|Ga0181338_1027611	Not Available	871	Open in IMG/M
3300015050\|Ga0181338_1035650	Not Available	750	Open in IMG/M
3300017700\|Ga0181339_1005233	Not Available	1652	Open in IMG/M
3300017701\|Ga0181364_1050670	Not Available	651	Open in IMG/M
3300017707\|Ga0181363_1015974	Not Available	1499	Open in IMG/M
3300017716\|Ga0181350_1085766	Not Available	791	Open in IMG/M
3300017722\|Ga0181347_1043877	Not Available	1364	Open in IMG/M
3300017722\|Ga0181347_1109869	Not Available	780	Open in IMG/M
3300017723\|Ga0181362_1003544	All Organisms → Viruses → Predicted Viral	3318	Open in IMG/M
3300017723\|Ga0181362_1028862	Not Available	1183	Open in IMG/M
3300017723\|Ga0181362_1032527	Not Available	1110	Open in IMG/M
3300017747\|Ga0181352_1174719	Not Available	559	Open in IMG/M
3300017754\|Ga0181344_1017684	Not Available	2229	Open in IMG/M
3300017754\|Ga0181344_1060860	Not Available	1118	Open in IMG/M
3300017754\|Ga0181344_1071363	Not Available	1024	Open in IMG/M
3300017754\|Ga0181344_1188996	Not Available	580	Open in IMG/M
3300017761\|Ga0181356_1009185	All Organisms → Viruses → Predicted Viral	3819	Open in IMG/M
3300017761\|Ga0181356_1052529	Not Available	1401	Open in IMG/M
3300017774\|Ga0181358_1157211	Not Available	772	Open in IMG/M
3300017774\|Ga0181358_1157212	Not Available	772	Open in IMG/M
3300017785\|Ga0181355_1029702	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	2362	Open in IMG/M
3300017785\|Ga0181355_1108029	All Organisms → Viruses → Predicted Viral	1146	Open in IMG/M
3300017785\|Ga0181355_1224146	Not Available	730	Open in IMG/M
3300017785\|Ga0181355_1392339	Not Available	503	Open in IMG/M
3300019783\|Ga0181361_100473	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	2351	Open in IMG/M
3300019783\|Ga0181361_101657	Not Available	1591	Open in IMG/M
3300019783\|Ga0181361_101974	Not Available	1492	Open in IMG/M
3300019783\|Ga0181361_105602	Not Available	958	Open in IMG/M
3300019784\|Ga0181359_1232485	Not Available	572	Open in IMG/M
3300019784\|Ga0181359_1270899	Not Available	504	Open in IMG/M
3300021519\|Ga0194048_10007061	Not Available	5274	Open in IMG/M
3300021519\|Ga0194048_10117642	All Organisms → Viruses → Predicted Viral	1014	Open in IMG/M
3300021963\|Ga0222712_10007394	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → unclassified Lavidaviridae → Yellowstone Lake virophage 5	10641	Open in IMG/M
3300021963\|Ga0222712_10455362	Not Available	766	Open in IMG/M
3300022179\|Ga0181353_1044010	Not Available	1178	Open in IMG/M
3300022179\|Ga0181353_1102416	Not Available	703	Open in IMG/M
3300022407\|Ga0181351_1165433	Not Available	779	Open in IMG/M
3300024343\|Ga0244777_10628799	Not Available	648	Open in IMG/M
3300025091\|Ga0209616_1010248	Not Available	988	Open in IMG/M
3300025418\|Ga0208253_1035036	Not Available	914	Open in IMG/M
3300025455\|Ga0208376_1038655	Not Available	991	Open in IMG/M
3300025532\|Ga0208249_1021104	All Organisms → Viruses → Predicted Viral	1854	Open in IMG/M
3300025606\|Ga0207954_1005265	All Organisms → Viruses → Predicted Viral	4407	Open in IMG/M
3300025616\|Ga0208613_1036962	Not Available	1149	Open in IMG/M
3300025635\|Ga0208147_1142948	Not Available	560	Open in IMG/M
3300025896\|Ga0208916_10009339	Not Available	3824	Open in IMG/M
3300025896\|Ga0208916_10201715	Not Available	861	Open in IMG/M
3300025896\|Ga0208916_10282429	Not Available	722	Open in IMG/M
3300025896\|Ga0208916_10485834	Not Available	538	Open in IMG/M
3300027708\|Ga0209188_1004589	Not Available	9075	Open in IMG/M
3300027736\|Ga0209190_1001016	Not Available	19998	Open in IMG/M
3300027785\|Ga0209246_10250588	Not Available	686	Open in IMG/M
3300027896\|Ga0209777_10048372	Not Available	3868	Open in IMG/M
3300027900\|Ga0209253_11003700	Not Available	576	Open in IMG/M
3300031707\|Ga0315291_10281502	All Organisms → Viruses → Predicted Viral	1642	Open in IMG/M
3300031746\|Ga0315293_10899917	Not Available	639	Open in IMG/M
3300031746\|Ga0315293_11007839	Not Available	593	Open in IMG/M
3300032397\|Ga0315287_10202885	All Organisms → Viruses → Predicted Viral	2315	Open in IMG/M
3300032401\|Ga0315275_10370767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1604	Open in IMG/M
3300033993\|Ga0334994_0150503	All Organisms → Viruses → Predicted Viral	1309	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.17%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	84.17%
Marine	Environmental → Aquatic → Marine	15.00%
Leaf	Host-Associated → Plants → Leaf	0.83%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	58.33%
Lake	Environmental → Aquatic → Freshwater → Lake	20.83%
Coastal	Environmental → Aquatic → Marine → Coastal	10.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.67%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	56.67%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	16.67%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.17%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	32.50%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	14.17%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	10.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	9.17%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.50%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.17%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.67%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.67%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.67%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.67%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.83%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.83%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002301	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004771	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M	Environmental	Open in IMG/M
3300004773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011114	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb	Environmental	Open in IMG/M
3300011184	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG	Environmental	Open in IMG/M
3300011335	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman	Environmental	Open in IMG/M
3300011336	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Paldang	Environmental	Open in IMG/M
3300012774	Freshwater microbial communities from Lake Simoncouche, Canada - S_130109_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017700	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.D	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019783	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025455	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M (SPAdes)	Environmental	Open in IMG/M
3300025532	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M (SPAdes)	Environmental	Open in IMG/M
3300025606	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M (SPAdes)	Environmental	Open in IMG/M
3300025616	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24028J26656_10007755	3300002091	Lentic	MPRKSDFVVGLEAVLNNPKASFMQNPKTFNELYSQSGMSMNAMMKHIGKSSKNRKQKEPTDAEKSEARLDRMEAQTNK*
JGI24028J26656_10015342	3300002091	Lentic	MPRKTAYQLGMEAVLNNPQTSFLHNPKTFHEIHKQSGMSISAMMRHIGGKKKGPKPPTDDEKIKARLDGMEEANKK*
JGI24028J26656_10061623	3300002091	Lentic	MPPHKTAYQLGMEAVLNNPQTSFLKNPKTFHELHKQSGMTMAAMMRHIGGKAKKEKQGPTDAERSKERLDAIESKSS*
JGI24218J26658_10125332	3300002092	Lentic	METVLNNPQTSFLHNPKTFHEIHKQSGMSMSQMMKHIGGQAKKKKQGPTDAERSKERLDKVEAKNESA*
JGI24219J26650_10175951	3300002098	Lentic	QLGMEAVLNNPQTSFLHNPKTFHEIHKQSGMSISAMMRHIGGKKKGPKPPTDDEKIKARLDGMEEANKK*
JGI24219J26650_10284481	3300002098	Lentic	MPXKTNFQLGMETVLNNPQTSFLHNPKTFHEIHKQSGMSMSQMMKHIGGQAKKKKQGPTDAERSKERLDKVEAKNESA*
JGI24219J26650_10381821	3300002098	Lentic	GMETVLNNPQTSFLHNPKTFHEIHKQSGMSMSQMMKHIGGQAKKKKQGPTDAERSKERLDKVEAKNESA*
JGI24891J29808_10031745	3300002301	Lentic	MPRKTAYQLGMEAVLNNPQTSFLHNPKTFHEIHKQSGMSISAMMRHIGGKKKGPKPPTDDEKIKA
JGI24890J29729_10259922	3300002307	Lentic	MPRKTNFQLGMETVLNNPQTSFLHNPKTFHEIHKQSGMSMSQMMKHIGGQAKKKKQGPTDAERSKERLDKVEAKNESA*
JGI24890J29729_10365792	3300002307	Lentic	MPRKTNFQLGMETVLNNPQTSFLHNPKTFHEIHKQSGMSMSQMMKHIGGQAKKKKHKEPTDAERSKERLDKVEAKNESA*
JGI24890J29729_10429752	3300002307	Lentic	RKTNFQLGMETVLNNPQTSFLHNPKTFHEIHKQSGMSMSQMMKHIGGQAKKKKQGPTDAERSKERLDKVEAKNESA*
B570J29032_1091464371	3300002408	Freshwater	MPRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQSQSGMSMSAMMKHIGSKSRKQKQKGPTDDEKSKERLDAMESANKK*
JGI25908J49247_101126152	3300003277	Freshwater Lake	MPYHKTNFQLGMEAVLNNPQTSFLTNPKTFNEIQKQSGMSMSSMMKHIGRQSKKQKDKGPTDAEKSEMRLKEMEAANKK*
JGI25907J50239_10915281	3300003394	Freshwater Lake	MPYHKTNFQLGMEAVLNNPQTSFLTNPKTFNEIQKQSGMSMSSMMKHIGRXSKKQKDKGPTDAEKSEMRLKEMEAANKK*
Ga0065173_10201943	3300004686	Freshwater	MPRKTAYQLGMETVLNNPKASFLQNPAVFREIHRQSGMSFNGMMRHLGSQVRKTKPPTDAEKSEARLEAMESKNKSSV*
Ga0007797_10492413	3300004771	Freshwater	MPHKTDFVLGLEAVLNNPQTSFMKNPKVFNEIYSQSKMSMNSMMKHIGKSSKNKKHKEPTDAEKSEARLDRMEAQTNK*
Ga0007797_10839012	3300004771	Freshwater	MPHKTAYQMGMEAVLNNPQTSFLHNPKTFNEIHKQSGMSVTGMMKHLGVQSQKQKRQPKPPTDAEKSAERLKQMEASSK*
Ga0007797_10989482	3300004771	Freshwater	MPRKTAYQLGMEAVLNNPQTSFLHNPKTFHEIHKQSGMSISAMMRHIGGKKKQPKPPTDDEKIKARLDGMEEANKK*
Ga0007797_11933852	3300004771	Freshwater	MEAVLNNPQTSFLHNPKTFHEIHKQSGMSISAMMRHIGGKKKQPKPPTDDEKIKARLDGMEEANKK*
Ga0007795_100164032	3300004773	Freshwater	MPRKTDFVLGLEAVLNNPQTSFMKNPKVFNEIYSQSKMSMNSMMKHIGKSSKNKKHKEPTDAEKSEARLDRMEAQTNK*
Ga0007795_101851921	3300004773	Freshwater	MPRKTAYQLGLEAVLNNPQTSFLHNPKTFNEIHKQSGMSISAMMRHIGGKKKQPKPPTDDEKIKARL
Ga0007794_102511962	3300004774	Freshwater	MPTYKTDFQLGMEAVLNNPKTSFLHNPKTFNEIYKQSGMSMSGMMKHIGSKARQQKQRGPTDAEKSEARLKEMEAAQK*
Ga0007794_102670272	3300004774	Freshwater	IQMPHKTDFQLGMEAVLNNPKTSFMTNPKTFNEIHKQSGMSMSAMMKHIGGKSRQQKKHEPTDAEKSEARSKEMEAAQK*
Ga0007792_101097681	3300004805	Freshwater	VIQMPHKTDFQLGMEAVLNNPKTSFMTNPKTFNEIHKQSGMSMSAMMKHIGGKSRQQKKHEPTDAEKSEARLKEMEAAQK*
Ga0007792_101467842	3300004805	Freshwater	MPTYKTDFQLGMEAVLNNPKTSFLHNPKTFNEIYKQSGMSMSGMMKHIGSKARQQKKQGPTDAEKSEARLKEMEAAQNK*
Ga0049081_100491773	3300005581	Freshwater Lentic	MPHKSNFQLGMEAVLNNPQTSFLTNPKTFYEIHKQSGMSMNAMMKHIGGQAKKQKNKEPTDAEKSKVRLDAMEAKTEKK*
Ga0075467_104213611	3300006803	Aqueous	MPVHKTNYQLGMEAVLNNPQTSFLHNPRTCHEIHKQSGMSMSAMMKHIGGQAKKQKEKGPTDAEKSEQRLKEMEAAQKK*
Ga0075464_100086144	3300006805	Aqueous	MPRKTDFQLGMEAVLNNPKTSFLQNPKTFSEIQSQSGMSMAAMMRHIGSKTRKQKQKGPTDDEKAKERLDAMESANKK*
Ga0075464_100171854	3300006805	Aqueous	MPPHKTAYQLGMEAVLNNPDTSFLKNPKTFHELHKQSGMSMAAMMRHIGGKAKKQKNEGPTDAEKAKERLDKIEASAK*
Ga0075464_103095172	3300006805	Aqueous	MPKKTAYQLGMEAVLNNPKTSFLTQPRTFNEIYSQSKMSMNAMMKHIGGKAKQKKKEPTDAERSKERLDAMEAQQK*
Ga0075464_104537352	3300006805	Aqueous	MPRKSDFVIGLETVLNNPQTSFMKNPKVFNEIYSQSKMSMNSMMKHIGKSSKNKKHKEPTDAEKSEARLDRMEAQTNK*
Ga0075464_108572551	3300006805	Aqueous	SGFFSLPLPMPRKSDFQLGMEKVLNNPKTSFLHNPKTYNEIQTQSGMSMNTMMKHIGGMARREKKKPPTDAERSKERIDAMETAAK*
Ga0075458_101595512	3300007363	Aqueous	MEAVLNNPQTSFLTQPRTFNEIYNQSKMSMNAMMKHIGGKVKNQKKKGPTDAERSKERLETMEAQQNK*
Ga0102866_12058092	3300007661	Estuarine	MEAVLNNPQTSFLTNPKTFNEIHKQSGMSMNAMMKHIGGKVKKQKEPTDAEKSKERLDAMEAKTE
Ga0102859_100019911	3300007708	Estuarine	MEAVLNNPQTSFLTQPRTFNEIYSQSKMSMNSMMKHIGGKANKKKKEPTDAERSKERLDAMESQQK*
Ga0105746_13071492	3300007973	Estuary Water	VLHCKKKGMPTFVRSGGFFSPPLPMPHKSDFQLGMEKVLNNPKTSFLHNPKTYNEIQTQSGMSMNTMMKHIGGMARRQKKKPPTDAERSKERIDAMETAAK*
Ga0108970_100673523	3300008055	Estuary	MPSHKTNFQLGMEAVLNNPQTSFLTNPKTFHEIHKQSGMSMNAMMKHIGGQAKKQKNKEPTDAEKSKVRLDAMEAKTEK
Ga0114880_12794991	3300008450	Freshwater Lake	LGYSQMPRKSDFQLGMQAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKSRKQKKGPTDDEKAKERLSEMESANKK*
Ga0114973_100010994	3300009068	Freshwater Lake	MPKKTAYQIGMETILNNPQTSFLTQPRTFNEIYSQSKMSMNAMMKHIGSKVKQKKGPTDAERSEERLETMEAQQK*
Ga0114962_100043237	3300009151	Freshwater Lake	MPRKSDFVLGLETVLNNKQTSFQSNPKVFHELYKQSGMSMNAMMKHIGRQSKNRKQKEPTDAEKSEARLNQMEASANK*
Ga0114962_100204163	3300009151	Freshwater Lake	MPRKSDFVIGLETVLNNPQTSFMKNPKVFNELYSQSKMSMNSMMKHIGKSAKNKKQKEPTDAEKSEARLDRMEAQTKQ*
Ga0114968_100014694	3300009155	Freshwater Lake	MPKKTAYQIGMETILNNPQTSFLTQPRTFNEIYSQSKMSMNAMMKHIGSKVKQKKGPTDAERSKERLETMEAQQK*
Ga0105102_104712582	3300009165	Freshwater Sediment	MPRKSDFQLGMEKVLNNPQTSFLHNPKTYNEIQSQSGMSMNTMMKHIGGMARRQKKKPPTDAERSKERIDAMETAAK*
Ga0105097_102407182	3300009169	Freshwater Sediment	PMPRKSDFQLGMEKVLNNPQTSFLHNPKTYNEIQSQSGMSMNTMMKHIGGMARRQKKKPPTDAERSKERIDAMETAAK*
Ga0133913_1005062511	3300010885	Freshwater Lake	MPKKTAYQIGMETILNNPQTSFLTQPRTFNEIYSQSKMSMNAMMKHIGSKVKQKKGPTDAERRKERLETMEAQQK*
Ga0133913_100825555	3300010885	Freshwater Lake	MEAVLNNPNTSFLTQPRTFNEIYSQSKMSMNAMMKHIGGKVKNQKKKEPTDAERSKERLDAMEAQQK*
Ga0151515_1033619	3300011114	Freshwater	MEAVLNNPQTSFLTNPRTFNEIQKQSGMSMSAMMKHIGRQSKKQKEKGPTDAEKSEMRLKEMEAANKK*
Ga0151515_1052217	3300011114	Freshwater	MPRKSDFQLGMEAVLNNPKTSFLQNPKTFREIQNQSGMSMYAMMKHIGSKTRKQKKEPTDAEKSAERLDAMESANKK*
Ga0151515_108625	3300011114	Freshwater	MEAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMKHIGGKMRKQKQKGPTDDEKAKERLDAMDSANKK*
Ga0136709_10118812	3300011184	Freshwater	MPKKTAYQLGMEAVLNNPQTSFLTQPRTFNEIYSQSKMSMNAMMKHIGGKVKQKKKEPSDAERSKERLDAMEAQQK*
Ga0153698_19255	3300011335	Freshwater	MPHKTNFQLGMEAVLNNPQTSFLQNPKTFNAIQKESGMSISAMMKHIGGQSKKNKKQEPTDAEKSEARLDRMEGASKK*
Ga0153703_121818	3300011336	Freshwater	MPHKTDFVRGLEAVLNNPQTSFMKNPKVFNEIYSQSKMSMNAMMKHIGKASKNKKTKEPTDAEKSEARLDRMEAQTNKS*
Ga0138283_12225051	3300012774	Freshwater Lake	TVLNNPQTSFMKNPKVFNEIYSQSKMSMNSMMKHIGKSSKNKKHKEPTDAEKSEARLDRMEAQTNK*
Ga0136642_10673963	3300013285	Freshwater	MPHKTTYQLGLEAVLNNPQTSFLTNPKTFHEIHKQSGMSMSAMMKHIGGQTKKQKQGPTDAEKSEQ
Ga0136641_10063305	3300013286	Freshwater	MPHKTNFQLGMEAVLNNPQTSFLQNPKTFNAIHKESGMSISAMMKHIGGQSKKNKKQEPTDAEKSEARLDRMEGASKK*
Ga0177922_105705282	3300013372	Freshwater	MQAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKSRKQKKGPTDDEKAKERLSEMESANKK*
Ga0177922_112312638	3300013372	Freshwater	MPHKTNFQLGMEAVLNNPQTSFLQNPKTFNAIQKESGMSVSAMMKHIGAQSKKNKKQEPTDAEKSEARLDRMEGASKK*
Ga0181338_10015006	3300015050	Freshwater Lake	MPRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSADRLDAMESANKK*
Ga0181338_10022353	3300015050	Freshwater Lake	MEAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQQKGPTDDEKAKERLDAMESANKK*
Ga0181338_10031043	3300015050	Freshwater Lake	MPSHRKSDFQLGMEAVLNNPKTSFLQNPKTYHEIQSQSGMSMSSMMKHIGGKSRKQQKGLTDAEKAKERLDAMESANKK*
Ga0181338_10276111	3300015050	Freshwater Lake	MPHKSDFQLGMEKVLNNPKTSFLHNPKTYNEIQTQSGMSMNTMMKHIGGMARRQQKKPPTDAERSKERIDAMETAAK*
Ga0181338_10356501	3300015050	Freshwater Lake	MEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSAERLDAME
Ga0181339_10052332	3300017700	Freshwater Lake	MPRKNDFQLGMEAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQQKGPTDDEKAKERLDAMESANKK
Ga0181364_10506702	3300017701	Freshwater Lake	MPRKSDFQLGMQAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQKKGPTDDEKAKERLSEMESANKK
Ga0181363_10159742	3300017707	Freshwater Lake	MPHKTNFQLGMEAVLNNPQTSFLTNPKTFHEIHKQSGMSMTAMMKHIGRQSKKQKEKGPTDAEKSEMRLKEMEAANKK
Ga0181350_10857662	3300017716	Freshwater Lake	MPHKSDFQLGMEKVLNNPKTSFLHNPKTYNEIQTQSGMSMNTMMKHIGGMARRQQKKPPTDAERSKERIDAMETAAK
Ga0181347_10438772	3300017722	Freshwater Lake	VLNNPQTSFLQNPKTFNAIQKESGMSVSAMMKHIGAQSKKNKKQEPTDAEKSEARLDRMEGASKK
Ga0181347_11098692	3300017722	Freshwater Lake	GMEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSAERLDAMESANKK
Ga0181362_10035444	3300017723	Freshwater Lake	MPRKSDFQLGMEAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQKKGPTDDE
Ga0181362_10288622	3300017723	Freshwater Lake	MPSHRKSDFQLGMQAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKSRKQKKGPTDDEKAKERLSEMESANKK
Ga0181362_10325272	3300017723	Freshwater Lake	MPRKTDFQLGMEAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQQKGPTDDEKAKE
Ga0181352_11747191	3300017747	Freshwater Lake	MPSHRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSADRLDAMESANKKCVKQRRATIS
Ga0181344_10176842	3300017754	Freshwater Lake	MPKKTSYQLGMEAVLNNPNTSFLTQPKTFNEIYSQSKMSMNAMMKHIGGKVKQKKKEPSDAERSKERLDAMEAQQK
Ga0181344_10608603	3300017754	Freshwater Lake	MPRKTDYQLGMEAVLNNPKTSFLQNPKTYHEIQSQSGMSMSAMMKHIGGKTRKQKQQGPTDAEKA
Ga0181344_10713631	3300017754	Freshwater Lake	MPSHKTNFQLGMEAVLNNPQTSFLTNPKTFHEIHKQSGMSMSAMMKHIGGQAKKQKDKGPTDAEKSEQRLKEMEAANKK
Ga0181344_11889962	3300017754	Freshwater Lake	MPRKTDYQLGMEAVLNNPKTSFLQNPKTFNEIQSQSGMSMSAMMKHIGGKTRKQKQQGPTDAEKAKERLDAMKSANKK
Ga0181356_10091852	3300017761	Freshwater Lake	MPRKNDFQLGMQAVLNNPKTSFLQNPKTYHEIQSQSGMSMSSMMKHIGGKSRKQQKGPTDAEKAKERLDAMESANKK
Ga0181356_10525292	3300017761	Freshwater Lake	MPHKTNFQLGMEAVLNNPQTSFLQNPKTFNAIQKESGMSVSAMMKHIGAQSKKNKKQEPTDAEKSEARLDRMEGASKK
Ga0181358_11572111	3300017774	Freshwater Lake	MPSHRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSADRLDAM
Ga0181358_11572121	3300017774	Freshwater Lake	MPRKSDFQLGMEAVLNNPKTSFLQNPKTYHEIQSQSGMSMSAMMKHIGGKSRKQKKGPTDEERSADRLDTMES
Ga0181355_10297024	3300017785	Freshwater Lake	DFQLGMEAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQQKGPTDDEKAKERLDAMESANKK
Ga0181355_11080292	3300017785	Freshwater Lake	MPRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSADRLDAMESANKK
Ga0181355_12241462	3300017785	Freshwater Lake	MPSHRKSDFQLGMQAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQKKGPTDDEKAKERL
Ga0181355_13923391	3300017785	Freshwater Lake	SHRKSDFQLGMEAVLNNPKTSFLQNPKTYHEIQSQSGMSMSAMMKHIGGKTRKQKQQGPTDAEKAKERLDAMESANKK
Ga0181361_1004733	3300019783	Freshwater Lake	MPYHKTNFQLGMEAVLNNPQTSFLTNPKTFNEIQKQSGMSMSSMMKHIGRQSKKQKDKGPTDAEKSEMRLKEMEAANKK
Ga0181361_1016572	3300019783	Freshwater Lake	MPRKTDFQLGMEAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQQKGPTDDEKAKERLDAMESANKK
Ga0181361_1019741	3300019783	Freshwater Lake	MPSHRKSDFQLGMEAVLNNPKTSFLQNPKTYHEIQSQSGMSMSSMMKHIGGKSRKQQKGPTDAEKAKERLDAMESANKK
Ga0181361_1056022	3300019783	Freshwater Lake	MPSHRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSADRLDAMESANKK
Ga0181359_12324852	3300019784	Freshwater Lake	LGMQAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKSRKQKKGPTDDEKAKERLSEMESANKK
Ga0181359_12708992	3300019784	Freshwater Lake	MPRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSAERLDAMESANKK
Ga0194048_100070616	3300021519	Anoxic Zone Freshwater	MPRKTAYQLGMEAVLNNPQTSFLHNPKTFHEIHKQSGMSISAMMRHIGGKKKQPKPPTDDEKIKARLDGMEEANKK
Ga0194048_101176422	3300021519	Anoxic Zone Freshwater	MPRKTDFVIGLETVLNNPQTSFMKNPKVFNELYSQSKMSMNSMMKHIGKSAKNKKQKEPTDAEKSEARLDRMEAQTKQ
Ga0222712_100073945	3300021963	Estuarine Water	MPRKTDYQLGMEAVLNNPKTSFLQNPKTYHEIQSQSGMSMSAMMKHIGGKTRKQKQQGPTDAEKAKERLDAMESANKK
Ga0222712_104553622	3300021963	Estuarine Water	MPHKSNFQLGMEAVLNNPQTSFLTNPKTFYEIHKQSGMSMNAMMKHIGGQAKKQKNKEPTDAEKSKVRLDAMEAKTEKK
Ga0181353_10440101	3300022179	Freshwater Lake	YQLGMEAVLNNPKTSFLQNPKTYHEIQSQSGMSMSAMMKHIGGKTRKQKQQGPTDAEKAKERLDAMESANKK
Ga0181353_11024163	3300022179	Freshwater Lake	MPYHKTNFQLGMEAVLNNPQTSFLTNPKTFNEIQKQSGMSMSSMMKHIGRQSKKQKDKGPTDA
Ga0181351_11654331	3300022407	Freshwater Lake	MPSHRKSDFQLGMQAVLNNPKTSFLQNPKTFSEIQSQSGMSMSAMMRHIGGKTRKQKKGPTDDEKAKERLSEMESANKK
Ga0244777_106287992	3300024343	Estuarine	MPRKTAYQLGMEAVLNNPQTSFLTQPRTFNEIYSQSKMSMNSMMKHIGGKANKKKKEPTDAERSKERLDAMESQQK
Ga0209616_10102482	3300025091	Freshwater	MPKKTAYQLGMEAVLNNPQTSFLTQPRTFNEIYSQSKMSMNAMMKHIGGKVKQKKKEPSDAERSKERLDAMEAQQK
Ga0208253_10350362	3300025418	Freshwater	MPRKTAYQLGMETVLNNPKASFLQNPAVFREIHRQSGMSFNGMMRHLGSQVRKTKPPTDAEKSEARLEAMESKNKSSV
Ga0208376_10386553	3300025455	Freshwater	MPHKTDFVLGLEAVLNNPQTSFMKNPKVFNEIYSQSKMSMNSMMKHIGKSSKNKKHKEPTDAEKSEARLD
Ga0208249_10211041	3300025532	Freshwater	MPRKTDFVLGLEAVLNNPQTSFMKNPKVFNEIYSQSKMSMNSMMKHIGKSSKNKKHKEPTDAEKSEARLDRMEAQTNK
Ga0207954_10052652	3300025606	Freshwater	MPHKTDFVLGLEAVLNNPQTSFMKNPKVFNEIYSQSKMSMNSMMKHIGKSSKNKKHKEPTDAEKSEARLDRMEAQTNK
Ga0208613_10369623	3300025616	Freshwater	MPTYKTDFQLGMEAVLNNPKTSFLHNPKTFNEIYKQSGMSMSGMMKHIGSKARQQKKQGPTDAEKSEARLKEMEAAQNK
Ga0208147_11429481	3300025635	Aqueous	MPRKTAYQLGMEAVLNNPQTSFLTQPRTFNEIYNQSKMSMNAMMKHIGGKVKNQKKKGPTDAERSKERLETMEAQQNK
Ga0208916_100093393	3300025896	Aqueous	MPRKTDFQLGMEAVLNNPKTSFLQNPKTFSEIQSQSGMSMAAMMRHIGSKTRKQKQKGPTDDEKAKERLDAMESANKK
Ga0208916_102017152	3300025896	Aqueous	MPRKSDFVIGLETVLNNPQTSFMKNPKVFNEIYSQSKMSMNSMMKHIGKSSKNKKHKEPTDAEKSEARLDRMEAQTNK
Ga0208916_102824292	3300025896	Aqueous	MPKKTAYQLGMEAVLNNPKTSFLTQPRTFNEIYSQSKMSMNAMMKHIGGKAKQKKKEPTDAERSKERLDAMEAQQK
Ga0208916_104858342	3300025896	Aqueous	MPPHKTAYQLGMEAVLNNPDTSFLKNPKTFHELHKQSGMSMAAMMRHIGGKAKKQKNEGPTDAEKAKERLDKIEASAK
Ga0209188_10045895	3300027708	Freshwater Lake	MPRKSDFVIGLETVLNNPQTSFMKNPKVFNELYSQSKMSMNSMMKHIGKSAKNKKQKEPTDAEKSEARLDRMEAQTKQ
Ga0209190_10010165	3300027736	Freshwater Lake	MPKKTAYQIGMETILNNPQTSFLTQPRTFNEIYSQSKMSMNAMMKHIGSKVKQKKGPTDAERSKERLETMEAQQK
Ga0209246_102505882	3300027785	Freshwater Lake	MPSHRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQNQSGMSMSAMMKHIGGKSRKQKKGPTDEERSADRLDTMESANKK
Ga0209777_100483723	3300027896	Freshwater Lake Sediment	MPRKTAYQLGMEAVLNNPQTSFLHNPAVFREIHKQSGMSMNGMMKHIGSQIRKTKPPTDAEKSEARLEAMETKQKK
Ga0209253_110037001	3300027900	Freshwater Lake Sediment	MPRKTDYQLGMEAVLNNPKTSFLQNPKTYHEIQNQSGMSMSAMMRHIGGKTRKQKQKGPTDEERSAERLDAMESANKK
Ga0315291_102815022	3300031707	Sediment	MPRKSDFQIGMETVLNNPKTSFLHNPKTYHEIQSQSGMSMNAMMKHIGGTARRQQKKGPTDAERSKERLDAMETATK
Ga0315293_108999171	3300031746	Sediment	MPRKSDFQIGMETVLNNPKTSFLHNPKTYHEIQSQSGMSMNAMMKHIGGTARRQQKKGPTDAERSKERLDAMETAVK
Ga0315293_110078391	3300031746	Sediment	MPHKTDFQLGMEAVLNNPKTSFMTNPKTFNEIHKQSGMSMSAMMKHIGGKSRQQKKHEPTDAEKSEARLKEMEAAQK
Ga0315287_102028851	3300032397	Sediment	MPRKSDFQIGMETVLNNPKTSFLHNPKTYHEIQSQSGMSMNAMMKHIGGTARRQQKKGPTDAERSKERLDAMETAGK
Ga0315275_103707673	3300032401	Sediment	MPRKSDFQIGMETVLNNPKTSFLHNPKTYHEIQSQSGMSMNAMMKHIGGTARRQQKKGPTDAERSKERLDAMETAPK
Ga0334994_0150503_701_937	3300033993	Freshwater	MPRKTDFQLGMEAVLNNPKTSFLQNPKTYNEIQSQSGMSMSAMMKHIGSKSRKQKQKGPTDDEKSKERLDAMESANKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073261

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences