Metagenome / Metatranscriptome Family F073398

Basic Information
Family ID	F073398
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	99 residues
Representative Sequence	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Number of Associated Samples	106
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.41 %
% of genes near scaffold ends (potentially truncated)	31.67 %
% of genes from short scaffolds (< 2000 bps)	77.50 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Most Common Taxonomy
Group	Bacteria (75.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.833 % of family members)
Environment Ontology (ENVO)	Unclassified (30.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.833 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.03% β-sheet: 22.66% Coil/Unstructured: 45.31%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.4.17: SOR-like	d6m35a_	6m35	0.81551
d.58.4.13: NIPSNAP	d1vqsa1	1vqs	0.79392
d.58.4.18: YbaA-like	d2okqa1	2okq	0.78882
d.58.4.5: PG130-like	d1iuja_	1iuj	0.78716
d.58.4.0: automated matches	d3qmqa1	3qmq	0.76601

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00999	Na_H_Exchanger	7.50
PF13515	FUSC_2	3.33
PF03306	AAL_decarboxy	2.50
PF03949	Malic_M	2.50
PF13276	HTH_21	1.67
PF05598	DUF772	1.67
PF13360	PQQ_2	1.67
PF13672	PP2C_2	0.83
PF13432	TPR_16	0.83
PF03795	YCII	0.83
PF13857	Ank_5	0.83
PF08281	Sigma70_r4_2	0.83
PF01243	Putative_PNPOx	0.83
PF12796	Ank_2	0.83
PF01227	GTP_cyclohydroI	0.83
PF00589	Phage_integrase	0.83
PF04224	DUF417	0.83
PF01120	Alpha_L_fucos	0.83
PF13271	DUF4062	0.83
PF03706	LPG_synthase_TM	0.83
PF03745	DUF309	0.83
PF13649	Methyltransf_25	0.83
PF12697	Abhydrolase_6	0.83
PF01244	Peptidase_M19	0.83
PF04293	SpoVR	0.83
PF02597	ThiS	0.83
PF00085	Thioredoxin	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	7.50
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	7.50
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	7.50
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	7.50
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	7.50
COG0281	Malic enzyme	Energy production and conversion [C]	2.50
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	2.50
COG3527	Alpha-acetolactate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.50
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1547	Predicted metal-dependent hydrolase	Function unknown [S]	0.83
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.83
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.83
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2719	Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation (function unknown)	Cell cycle control, cell division, chromosome partitioning [D]	0.83
COG3059	Reactive chlorine resistance protein RclC/YkgB, DUF417 family	Defense mechanisms [V]	0.83
COG3669	Alpha-L-fucosidase	Carbohydrate transport and metabolism [G]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.83 %
Unclassified	root	N/A	24.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.83 %
Unclassified	root	N/A	24.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.83 %
Unclassified	root	N/A	24.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples	0.83 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.83 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.83 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.83 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.17 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.83 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104973820	Not Available	624	Open in IMG/M
3300000559\|F14TC_102726631	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300000750\|JGI12272J11983_1099121	Not Available	685	Open in IMG/M
3300002568\|C688J35102_118465770	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300003218\|JGI26339J46600_10000124	All Organisms → cellular organisms → Bacteria	25880	Open in IMG/M
3300004157\|Ga0062590_101184501	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300004463\|Ga0063356_100370823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1822	Open in IMG/M
3300004463\|Ga0063356_106002351	Not Available	521	Open in IMG/M
3300004643\|Ga0062591_101877530	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005289\|Ga0065704_10667800	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005290\|Ga0065712_10376262	Not Available	757	Open in IMG/M
3300005290\|Ga0065712_10534989	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005294\|Ga0065705_10827697	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005295\|Ga0065707_10217151	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300005333\|Ga0070677_10713705	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005341\|Ga0070691_10758990	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005365\|Ga0070688_100005311	All Organisms → cellular organisms → Bacteria	6776	Open in IMG/M
3300005365\|Ga0070688_101179688	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005445\|Ga0070708_100166748	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300005459\|Ga0068867_100401179	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300005467\|Ga0070706_101549997	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005468\|Ga0070707_100145557	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300005468\|Ga0070707_100867767	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300005529\|Ga0070741_10053060	All Organisms → cellular organisms → Bacteria	4870	Open in IMG/M
3300005718\|Ga0068866_10658492	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005764\|Ga0066903_107237321	Not Available	574	Open in IMG/M
3300005842\|Ga0068858_100017008	All Organisms → cellular organisms → Bacteria	6828	Open in IMG/M
3300005843\|Ga0068860_101769885	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300006028\|Ga0070717_10198153	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300006028\|Ga0070717_11094492	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300006755\|Ga0079222_10790955	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300006804\|Ga0079221_11343009	Not Available	565	Open in IMG/M
3300006844\|Ga0075428_100002265	All Organisms → cellular organisms → Bacteria	20840	Open in IMG/M
3300006844\|Ga0075428_102328223	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300006845\|Ga0075421_100025692	All Organisms → cellular organisms → Bacteria	7428	Open in IMG/M
3300006846\|Ga0075430_100733088	Not Available	815	Open in IMG/M
3300006880\|Ga0075429_101163266	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300007004\|Ga0079218_13172361	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300009094\|Ga0111539_11843074	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300009100\|Ga0075418_10170856	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300009101\|Ga0105247_10032910	All Organisms → cellular organisms → Bacteria	3151	Open in IMG/M
3300009137\|Ga0066709_100464383	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300009143\|Ga0099792_10209916	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300009156\|Ga0111538_10113716	All Organisms → cellular organisms → Bacteria	3438	Open in IMG/M
3300009156\|Ga0111538_10560255	Not Available	1449	Open in IMG/M
3300009157\|Ga0105092_10096793	Not Available	1616	Open in IMG/M
3300009157\|Ga0105092_10563924	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009553\|Ga0105249_10705839	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300009553\|Ga0105249_11609912	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300010401\|Ga0134121_11094414	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300012209\|Ga0137379_11574094	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012210\|Ga0137378_10778910	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300012362\|Ga0137361_10720245	Not Available	911	Open in IMG/M
3300012517\|Ga0157354_1093251	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012532\|Ga0137373_10080390	All Organisms → cellular organisms → Bacteria	2908	Open in IMG/M
3300012532\|Ga0137373_10572854	Not Available	854	Open in IMG/M
3300012893\|Ga0157284_10178170	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012898\|Ga0157293_10214640	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012917\|Ga0137395_11218751	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300013308\|Ga0157375_11506521	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300014326\|Ga0157380_10070482	All Organisms → cellular organisms → Bacteria	2825	Open in IMG/M
3300015372\|Ga0132256_100004117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	12390	Open in IMG/M
3300017792\|Ga0163161_11078458	Not Available	689	Open in IMG/M
3300018469\|Ga0190270_12234586	Not Available	608	Open in IMG/M
3300018476\|Ga0190274_10041331	All Organisms → cellular organisms → Bacteria	3254	Open in IMG/M
3300018476\|Ga0190274_12653906	Not Available	598	Open in IMG/M
3300019255\|Ga0184643_1360654	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300020080\|Ga0206350_10007089	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300021046\|Ga0215015_10608162	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300021046\|Ga0215015_10799586	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300021088\|Ga0210404_10067865	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300021171\|Ga0210405_10404006	Not Available	1076	Open in IMG/M
3300021559\|Ga0210409_10370011	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300023261\|Ga0247796_1080358	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025290\|Ga0207673_1036108	Not Available	690	Open in IMG/M
3300025315\|Ga0207697_10060600	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300025318\|Ga0209519_10644413	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300025900\|Ga0207710_10014139	All Organisms → cellular organisms → Bacteria	3362	Open in IMG/M
3300025922\|Ga0207646_10218649	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300025926\|Ga0207659_10792396	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300025931\|Ga0207644_10103370	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300025941\|Ga0207711_11473810	Not Available	623	Open in IMG/M
3300025961\|Ga0207712_11942247	Not Available	527	Open in IMG/M
3300026035\|Ga0207703_10884270	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300026088\|Ga0207641_10054311	All Organisms → cellular organisms → Bacteria	3398	Open in IMG/M
3300026089\|Ga0207648_11730650	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300027061\|Ga0209729_1000767	All Organisms → cellular organisms → Bacteria → Acidobacteria	2453	Open in IMG/M
3300027682\|Ga0209971_1189697	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300027825\|Ga0209039_10000777	All Organisms → cellular organisms → Bacteria	30700	Open in IMG/M
3300027880\|Ga0209481_10068535	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300027880\|Ga0209481_10512264	Not Available	620	Open in IMG/M
3300027886\|Ga0209486_11024678	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300027907\|Ga0207428_10027061	All Organisms → cellular organisms → Bacteria → Acidobacteria	4776	Open in IMG/M
3300027909\|Ga0209382_10011508	All Organisms → cellular organisms → Bacteria	10987	Open in IMG/M
3300028379\|Ga0268266_11020838	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300028380\|Ga0268265_11736459	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300028812\|Ga0247825_10849980	Not Available	660	Open in IMG/M
3300031058\|Ga0308189_10451000	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300031092\|Ga0308204_10222199	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031094\|Ga0308199_1069034	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300031538\|Ga0310888_10367706	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300031547\|Ga0310887_10707616	Not Available	626	Open in IMG/M
3300031562\|Ga0310886_10287170	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300031720\|Ga0307469_10390578	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300031820\|Ga0307473_10301288	All Organisms → cellular organisms → Bacteria → Proteobacteria	1009	Open in IMG/M
3300031858\|Ga0310892_10475340	Not Available	828	Open in IMG/M
3300031913\|Ga0310891_10046608	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300031943\|Ga0310885_10876558	Not Available	513	Open in IMG/M
3300031962\|Ga0307479_10103557	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300032017\|Ga0310899_10110649	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300032179\|Ga0310889_10306741	Not Available	767	Open in IMG/M
3300032180\|Ga0307471_100519378	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300032180\|Ga0307471_101267610	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300032205\|Ga0307472_102670214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300033551\|Ga0247830_11317080	Not Available	577	Open in IMG/M
3300034268\|Ga0372943_0348222	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.17%
Host-Associated	Host-Associated	35.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	35.83%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.17%
Freshwater	Environmental → Aquatic → Freshwater	4.17%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.50%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.67%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1049738202	3300000364	Soil	QVEQKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
F14TC_1027266312	3300000559	Soil	MYVSRLSFATLPGHTHQVEDKLRRLRDLVTSSGGTHVRVLRAHFASLGAPDLIFEQEVPDLVTLEQGIGDVVTKAAFQDLSREISQLLARTPKREVYEVL*
JGI12272J11983_10991211	3300000750	Soil	VYVSRLTFATRPGHTHAAEEKLRRLRDLVTRAGARNVRVLRTHFASSGAPDLVFEQEAPDLASLEQEIGAVTGDAEFQTLSREISEHLARTTKREVYQIVE*
C688J35102_1184657701	3300002568	Soil	VYVSRLTFATLPGHTHEVEERLRRLRDLVAQSGGQNVRVLRTHFGSLGAPDLVFEQEVADLAALEGEIGAVTGNAEFQALSREISQRLARTPKRELYEIIE*
JGI26339J46600_1000012410	3300003218	Bog Forest Soil	MYLSRLTFATLPGHTRQVEEKLRRLRDMIAQAGGEQVRVLRSHFASLGAPDLVLEQEAPDLAALEKGIGTVTGSADFQALSLEISELLARGPKREVYQIL*
Ga0062590_1011845012	3300004157	Soil	VRGRTEEVAVYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLL
Ga0063356_1003708232	3300004463	Arabidopsis Thaliana Rhizosphere	MYISRLTFATLPGHTSRVEEKLRRLRDLVIQAGGTHVRVLRTHFASLGAPDVVFEQEVADLATLEEEIGDVVTNAEFQTLSREISELLARTPKREVYEVL*
Ga0063356_1060023511	3300004463	Arabidopsis Thaliana Rhizosphere	TRQVEAKLRSLRDLVGQAGGTHVRVLRTHFASIGAPDLVFEQEVPDLPTLEQEIADVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0062591_1018775302	3300004643	Soil	VRGRTEEVAVYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREIS
Ga0065704_106678001	3300005289	Switchgrass Rhizosphere	VYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEKEIDDVVANTAFQTLSREISELLARTPKREVYEVL*
Ga0065712_103762622	3300005290	Miscanthus Rhizosphere	MYLSRLTFTTLPGHTRQVEQKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0065712_105349891	3300005290	Miscanthus Rhizosphere	LYLSRLTFTTLPGHTRQVEEKLRGLRDLVAQAGGIHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0065705_108276971	3300005294	Switchgrass Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0065707_102171511	3300005295	Switchgrass Rhizosphere	MQEVAVYISRLTFATLPGHTHEVEEKLRRLRDLVAQAGGTNVRVLRAHFASLGAPDVIFEQEVPDLSTLEREIGDVVTKAAFQELSREVSELLARTPKREIYEVL*
Ga0066388_1041295572	3300005332	Tropical Forest Soil	MYVSRLTFATLPGRTHEAEEKLKALRDLVATAGGRRPRVLRTHFASLGAPDLIFEQEAPDLATLESEIGAVTNDPRFRTLSQEISGLLSGTSKREVYRIID*
Ga0070677_107137051	3300005333	Miscanthus Rhizosphere	LYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0070691_107589901	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVAQAGGIHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0070688_1000053111	3300005365	Switchgrass Rhizosphere	MYLSRLTFTTLPGHTRQVEQKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISEL
Ga0070688_1011796881	3300005365	Switchgrass Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISEL
Ga0070708_1001667482	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MYLSRLTFATLPGHTREVEEKLQQLRDLVSQAGGQHVRILRSHFASLGAADLLFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL*
Ga0068867_1004011792	3300005459	Miscanthus Rhizosphere	VYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTPKREVYEVLA*
Ga0070706_1015499972	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDAEAPGRSLLGDDPWLEQGGVRERTEEVAVYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALEQEIGDVVTNAAFQ
Ga0070707_1001455572	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MYLSRLTFATLPGHTREVEEKLQQLRDLVSQAGGQHVRVLRSHFASLGAADLLFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL*
Ga0070707_1008677671	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VRERTEEAAVYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTPKREVYEVL*
Ga0070741_100530605	3300005529	Surface Soil	MYISRLAFTTLPGHTHEVEQKLRQLSDLVSQAGGQRPRVLRTHFASLGAPDLVFEQEAPDLAALEREIAAVTGNPAFQTLSREISGLLAHTPKREVYEVLS*
Ga0068866_106584922	3300005718	Miscanthus Rhizosphere	RLTFTTLPGHTRQVEEKLRGLRDLVAQAGGIHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0066903_1072373211	3300005764	Tropical Forest Soil	GHTHEAEDKLKRLCDLITQAGGTKPRVLRTHFASTGAPDLVLEQEAGDLATLEREIAAVTANPAFRSLSQEITECLAQTPKREVYQIVE*
Ga0068858_1000170081	3300005842	Switchgrass Rhizosphere	VYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLAALEQEIGDVVTNAAFQALSREISQLLARTPKREVYEVL*
Ga0068860_1017698851	3300005843	Switchgrass Rhizosphere	VYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTPKREVY
Ga0070717_101981531	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MYLSRLTFATLPGHTREVEEKLRQLRDLVSHAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGSVTGSANFQALSLEISKLLARGPKREVYQIL*
Ga0070717_110944921	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MYLSRLTFATLPGHTREVEEKLQQLRDLVSQAGGQHVRVLRSHFASLGAPDLLFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREV
Ga0079222_107909552	3300006755	Agricultural Soil	MYVSRLTFATLPGHTREVEEKLRQLRDLVSQAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGTVTGNAEFQALSLEISKLLARGPKREIYQIL*
Ga0079221_113430091	3300006804	Agricultural Soil	MYLSRLTFATLPGHTREVEEKLQQLRDLVSQAGGQHVRILRSHFASLGAADLLFEQEVPDLATLEGEIGTVTGNAEFQALSLEISKLLARGPKREIYQIL*
Ga0075428_10000226523	3300006844	Populus Rhizosphere	MYVSRLSFATVPGHTHQVEDKLRRLRDLVISSGGTHVRVLRAHFASLGAPDLIFEQEVPDLVTLEQEIGDVVTKAAFQDLSREISQLLARTPKREVYEVL*
Ga0075428_1023282231	3300006844	Populus Rhizosphere	MYMSRLSFATLPGHTHQVEDKLRRLRDLVVSSGGTHVRVLRAHFASLGAPDLIFEQEVPDLATLEREIGDVVTKAAFQELSLEISQLLAGAPKREVYEVL*
Ga0075421_10002569211	3300006845	Populus Rhizosphere	VYLSRLTFTTLPGHTRQVEDKLRNLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVANTAFQTLSREISELLARTPKREVYEVL*
Ga0075430_1007330881	3300006846	Populus Rhizosphere	VYLSRLTFTTLPGRTRQVEEKLRNLRDLVGQAGATHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVANTAFQTL
Ga0075429_1011632662	3300006880	Populus Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEV
Ga0079218_131723612	3300007004	Agricultural Soil	VTVYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDAVVTKTAFQTLSREISELLARTPKREVYEVL*
Ga0111539_118430741	3300009094	Populus Rhizosphere	VEDKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEREIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0075418_101708563	3300009100	Populus Rhizosphere	VEDKLRNLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVANTAFQTLSREISELLARTPKREVYEVL*
Ga0105247_100329102	3300009101	Switchgrass Rhizosphere	VEEQLRRLRDLVAQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLAALEQEIGDVVTNAAFQALSREISQLLARTPKREVYEVL*
Ga0066709_1004643833	3300009137	Grasslands Soil	VYLSRLTFATLPGHTRQVEEQLRRLRDVVAQVGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALEQEIGDVVTNAAFQALSREISQLLARTPKREVYEVL*
Ga0099792_102099162	3300009143	Vadose Zone Soil	VEIKKQRQVDVRERTEEVLVYLSRLTFATLPGHTRQVEEQLGRLRDLVSQAGGTQVRVLRTHFASLGAPDLVFEQEVPDLRALEQEIGDVVTNASFQALSREISQLLARTPKREVYEVL*
Ga0111538_101137162	3300009156	Populus Rhizosphere	MYVSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0111538_105602552	3300009156	Populus Rhizosphere	VEDKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLSTLEQEIGDVVTNTAFQRLSREISELLERTPKREVYEVL*
Ga0105092_100967932	3300009157	Freshwater Sediment	MYLSRLTFATLPGHTHQVEEKLRRLSDLVAQAGGTHVRVLRTHFASLGAPDLVFEQEVSDLSTLEQEIGDVVTNTAFQALSREISALLARTPKREVYEVL*
Ga0105092_105639241	3300009157	Freshwater Sediment	MPARVRALTEEVTVYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0105249_107058392	3300009553	Switchgrass Rhizosphere	MYVSRLTFTTLPGHTRQVEEKLRGLRDLVAQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0105249_116099121	3300009553	Switchgrass Rhizosphere	MDAEAPERSLLGDDPWLEQGGVRERTEEVAVYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTPKREVYEVL*
Ga0126307_114335221	3300009789	Serpentine Soil	MYVSRLTFATLPGRTHEAEEKLKALRDLVAAAGGRRPRVLRSHFASLGAPDLVFEQEAPDLAALEGEIGAVTSDPRFQALSRDISGL
Ga0134121_110944142	3300010401	Terrestrial Soil	VRDRTEEVAVYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTPKREVYEVLA*
Ga0137379_115740941	3300012209	Vadose Zone Soil	VEEKLRRLRDLVAQAGGERVRVLRSHFASLGAPDLIFEQEVPDLAALEREIGSVTGNEEFQALSREISTLLARTPKREVYQIL*
Ga0137378_107789102	3300012210	Vadose Zone Soil	VEEKLRRLRDLVAQAGGERVRVLRSHFASLGAPDLIFEQEVPDLAALEREIGSVTGNEEFQALSRDISMLLARTPKREVYQII*
Ga0137361_107202451	3300012362	Vadose Zone Soil	MYLSRLTFATLPGHTREVEEKLRQLRNLVSQAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGSVTGSANFQALSLEISKLLARGPKREVYQIL*
Ga0157354_10932511	3300012517	Unplanted Soil	KLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0137373_100803903	3300012532	Vadose Zone Soil	MAYVSRLTFTAQPGHTHQAEEKLQRLSELVAKAGGVRPRVLRTHFASPGAPDLVFEQEAPDLAALEQEIGAVTASDDFQALSQEITDCLALTPKREVYQIVS*
Ga0137373_105728542	3300012532	Vadose Zone Soil	MYVSRLAFATLPGHTHQVEEKLRQLRDLVAQAGGQRPRVLRPHFGSLGAPALVFEQEAPDLATLEQEIGTVTENAEFQALTREVSELLARTPKQEVFQLIE*
Ga0157284_101781701	3300012893	Soil	VEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0157293_102146402	3300012898	Soil	VEEKLRGLRDLVAQAGGIHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0137395_112187511	3300012917	Vadose Zone Soil	SRLTFATLPGHTRQVEEQLGRLRDLVSQAGGTQVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTPKREVYEVL*
Ga0157375_115065211	3300013308	Miscanthus Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTL
Ga0157380_100704822	3300014326	Switchgrass Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTKTAFQTLSREISELLARTPKREVYEVL*
Ga0132256_1000041172	3300015372	Arabidopsis Rhizosphere	MYLSRLTFTTLPGHTRQVEQKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL*
Ga0163161_110784581	3300017792	Switchgrass Rhizosphere	LYLSRLTFTTLPGHTRQVEDKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKR
Ga0190270_122345862	3300018469	Soil	EEKLRGLRDLVGQAGGTHVRVLRTHFASLGSADLVFEQEVPDLPTLEREIADVVTNTAFQTLSREISELLARTPKREVYEVLG
Ga0190274_100413312	3300018476	Soil	VYLSRLTFTTLPGQTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGSADLVFEQEVPDLPTLEREIADVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0190274_126539061	3300018476	Soil	VYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVPALRTHFASLGAPDLVFEQEVPDLPTLEREIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0184643_13606541	3300019255	Groundwater Sediment	YLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTPKREVYEVLA
Ga0206350_100070891	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MYVSRLAFATLPGHTHQVEEKLRRLRDLVAQAGGQEVRVLRTHFGSLGAPDLVFEQEAPDLATLEREIGTVTDNAEFQTLSREMSGLLARTPKREVFQLVD
Ga0215015_106081622	3300021046	Soil	MYLSRLTFATLPGHTREVEEKLQQLRDLVSQAGGQHVRILRSHFASLGAADLLFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL
Ga0215015_107995861	3300021046	Soil	MYLSRLTFATLPGHTREVEEKLRQLRDLVSHAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGSVTGSANFQALSLEISKLLARGPKREVYQIL
Ga0210404_100678651	3300021088	Soil	YLSRLTFATLPGHTREVEEKLRRLRDLVSRTGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL
Ga0210405_104040062	3300021171	Soil	MYLSRLTFATLPGHTREVEEKLRQLRELVSKAGGRHVRVLRSHFASLGAPDLVFEQEVPDLSTLEGEIGTVTGNADFQGLSLEISKLLARGPKREVYQIL
Ga0210409_103700113	3300021559	Soil	MYLSRLTFATLPGHTREVEEKLRQLRDLVSQAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL
Ga0247796_10803582	3300023261	Soil	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVAQAGGIHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0207673_10361081	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	MYLSRLTFTTLPGHTRQVEQKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0207697_100606004	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0209519_106444131	3300025318	Soil	VYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0207710_100141392	3300025900	Switchgrass Rhizosphere	VYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLAALEQEIGDVVTNAAFQALSREISQLLARTPKREVYEVL
Ga0207646_102186494	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LTFATLPGHTREVEEKLQQLRDLVSQAGGQHVRVLRSHFASLGAADLLFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL
Ga0207659_107923961	3300025926	Miscanthus Rhizosphere	LYLSRLTFTTLPGHTRQVEEKLRGLRDLVAQAGGIHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0207644_101033702	3300025931	Switchgrass Rhizosphere	LYLSRLTFTTLPGHTRQVEQKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0207711_114738102	3300025941	Switchgrass Rhizosphere	MYLSRLTFTTLPGHTRQVEQKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLA
Ga0207712_119422471	3300025961	Switchgrass Rhizosphere	MYVSRLTFTTLPGHTRQVEEKLRGLRDLVAQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0207703_108842702	3300026035	Switchgrass Rhizosphere	VYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTPKREVYEVLA
Ga0207641_100543114	3300026088	Switchgrass Rhizosphere	LTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0207648_117306502	3300026089	Miscanthus Rhizosphere	MYVSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0209729_10007673	3300027061	Forest Soil	MYVSRLTFVTLPGHTREVEEKLRKLRDLVSHAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGTVTGNTDFQALSLEISKLLSRGPKREVYQIL
Ga0209971_11896971	3300027682	Arabidopsis Thaliana Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREV
Ga0209039_1000077713	3300027825	Bog Forest Soil	MYLSRLTFATLPGHTRQVEEKLRRLRDMIAQAGGEQVRVLRSHFASLGAPDLVLEQEAPDLAALEKGIGTVTGSADFQALSLEISELLARGPKREVYQIL
Ga0209481_100685353	3300027880	Populus Rhizosphere	MYVSRLSFATVPGHTHQVEDKLRRLRDLVISSGGTHVRVLRAHFASLGAPDLIFEQEVPDLVTLEQEIGDVVTKAAFQDLSREISQLLARTPKREVYEVL
Ga0209481_105122641	3300027880	Populus Rhizosphere	MYLSRLTFTTLPGHTRQVEDKLRNLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVANTAFQTLSREISELLARTPKREVYEVL
Ga0209486_110246781	3300027886	Agricultural Soil	HGRGFRRLRRTGCFARARSRALTEEVTVYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDAVVTKTAFQTLSREISELLARTPKREVYEVL
Ga0207428_100270614	3300027907	Populus Rhizosphere	MYVSRLSFATLPGHTHQVEDKLRRLRDLVTSSGGTHVRVLRAHFASLGAPDLIFEQEVPDLVTLEQGIGDVVTKAAFQDLSREISQLLARTPKREVYEVL
Ga0209382_1001150810	3300027909	Populus Rhizosphere	VYLSRLTFTTLPGHTRQVEDKLRNLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVANTAFQTLSREISELLARTPKREVYEVL
Ga0268266_110208381	3300028379	Switchgrass Rhizosphere	MYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLA
Ga0268265_117364591	3300028380	Switchgrass Rhizosphere	VEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0247822_106671151	3300028592	Soil	MYVSRLTFATQPGRTHEAEEKLTALRDLVAAAGGRRPRVLRSHFASLGAPDLVFEQEAPDLAALEAEIGAVTSDPRFQALSRDISGLLAATSKREVYQVID
Ga0247820_103017471	3300028597	Soil	MYVSRLTFATQPGRTHEAEEKLTALRDLVAAAGGRRPRVLRSHFASLGAPDLVFEQEAPDLAALEAEIGAVTGDPRFQALSRDISGLLAATSKREVYQVID
Ga0247825_108499801	3300028812	Soil	LALIRPWCGDSDASGAQVASRWRSTSAGARRRALTEEVTVYLSRLTFTTLPGHTRQVEDKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIADVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0308189_104510001	3300031058	Soil	VYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALEQEIGDVVTNAAFQALSREISQLLARTPKREVYEVLA
Ga0308204_102221991	3300031092	Soil	LYLSRLTFATQPGHTRQVEEKLARLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLSALEQEIGDVVTNTTFQVLSREISELLARTPKREVYEVL
Ga0308199_10690342	3300031094	Soil	VRERAEEVAVYLSRLTFATLPGHTRQVEEQLRRLRDLVAQAGGTRVRVLRTHFASLGAPDLVFEQEVPDLPALESEIGDVVTNAAFQALSREISQLLARTP
Ga0310888_103677062	3300031538	Soil	MYVSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISEPLARTPKREVYEVL
Ga0310887_107076161	3300031547	Soil	VYLSRLTFTTLPGHTRQVEDKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIADVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0310886_102871702	3300031562	Soil	MYVSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSR
Ga0307469_103905781	3300031720	Hardwood Forest Soil	MYLSRLTFATLPGHTREVEEKLRQLRDLVSRAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL
Ga0307473_103012881	3300031820	Hardwood Forest Soil	REVEEKLRQLRDLVSQAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL
Ga0310892_104753402	3300031858	Soil	VYLSRLTFTTLPGHTRQVEDKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLSTLEQEIADVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0310891_100466082	3300031913	Soil	IRPWCGDSEARGAQVASRWRSSSQAPVRALTEEVTVYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0310885_108765581	3300031943	Soil	MYVSRLTFATLPGRTHEAEAKLTALRDLVAAAGGRRPRVLRSHFASLGAPDLVFEQEAPDLAALEAEIGAVTGDPRFQALSRDISALLAATPKREVYQVID
Ga0307479_101035572	3300031962	Hardwood Forest Soil	MYLSRLTFATLPGHTREVEEKLRQLRDLVSRTGGQRVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL
Ga0310899_101106491	3300032017	Soil	QGASRWRSFQRRRECAPTEEVTVYLSRLTFTTLPGHTRQVEEKLRGLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIDDVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0310889_103067412	3300032179	Soil	VYLSRLTFTTLPGHTRQVEDKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIADVVTNTAFQTLSREISELLA
Ga0307471_1005193781	3300032180	Hardwood Forest Soil	MYLSRLTFATLPGHTREVEEKLRQLRDLVSQAGGQHVRVLRSHFASLGAPDLIFEQEVPDLATLEGEIGSVTGSVNFQALSLEISKLLARGPKREVYQIL
Ga0307471_1012676101	3300032180	Hardwood Forest Soil	MYLSRLTFATLPGHTREVEQKLRQLRDLVSRTGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGTVTGSADFQALSLEISKLLARGPKREVYQIL
Ga0307472_1026702141	3300032205	Hardwood Forest Soil	MYLSRLTFATLPGHTREVEEKLRQLRDLVSQAGGQHVRVLRSHFASLGAPDLVFEQEVPDLATLEGEIGSVTGSANFQALSLEISKLLARGPKREVYQIL
Ga0247830_113170801	3300033551	Soil	PWCGDSDASGAQIASRWRSTSAGARRRALTEEVTVYLSRLTFTTLPGHTRQVEDKLRSLRDLVGQAGGTHVRVLRTHFASLGAPDLVFEQEVPDLPTLEQEIADVVTNTAFQTLSREISELLARTPKREVYEVL
Ga0372943_0348222_589_891	3300034268	Soil	VYVSRLTFSTLPGHTGEVEQKLLRLRDLVIQAGGKNVRVLRGHFGSLGAPDVVFEQDVADLATLESEIGSVTGTSSFQTLSHEISSLLARTPKREVYQVL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073398

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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