NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F073417

Metagenome Family F073417

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073417
Family Type Metagenome
Number of Sequences 120
Average Sequence Length 76 residues
Representative Sequence MIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Number of Associated Samples 101
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 7.50 %
% of genes near scaffold ends (potentially truncated) 27.50 %
% of genes from short scaffolds (< 2000 bps) 70.83 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (65.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(11.667 % of family members)
Environment Ontology (ENVO) Unclassified
(65.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.167 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 63.46%    β-sheet: 0.00%    Coil/Unstructured: 36.54%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.238.1.3: IMD domaind1y2oa11y2o0.81019
a.238.1.0: automated matchesd3ok8a_3ok80.79994
a.2.5.1: Prefoldind1fxka_1fxk0.78141
f.5.1.0: automated matchesd5azpa_5azp0.77959
f.5.1.0: automated matchesd3pika_3pik0.77213

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF02562PhoH 4.17
PF13589HATPase_c_3 1.67
PF09722Xre_MbcA_ParS_C 1.67
PF04545Sigma70_r4 1.67
PF06067DUF932 1.67
PF10263SprT-like 0.83
PF13518HTH_28 0.83
PF03237Terminase_6N 0.83
PF07587PSD1 0.83
PF00082Peptidase_S8 0.83
PF04542Sigma70_r2 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 4.17
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 4.17
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.83
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.83
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.83
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.83

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.00 %
All OrganismsrootAll Organisms35.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10016753All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium3936Open in IMG/M
3300001347|JGI20156J14371_10002540All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium14249Open in IMG/M
3300001347|JGI20156J14371_10013669Not Available4816Open in IMG/M
3300001347|JGI20156J14371_10148944Not Available657Open in IMG/M
3300001349|JGI20160J14292_10142270Not Available766Open in IMG/M
3300001349|JGI20160J14292_10190454Not Available603Open in IMG/M
3300001352|JGI20157J14317_10057562Not Available1722Open in IMG/M
3300001352|JGI20157J14317_10091963All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium1131Open in IMG/M
3300002145|S2t7BSb_10761085Not Available719Open in IMG/M
3300003620|JGI26273J51734_10047443All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium TMED321384Open in IMG/M
3300004097|Ga0055584_100204393Not Available2006Open in IMG/M
3300004448|Ga0065861_1008542Not Available33375Open in IMG/M
3300004448|Ga0065861_1013110All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium1077Open in IMG/M
3300004460|Ga0066222_1015075All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium696Open in IMG/M
3300005606|Ga0066835_10050890Not Available1237Open in IMG/M
3300005941|Ga0070743_10073886Not Available1152Open in IMG/M
3300005941|Ga0070743_10186309Not Available683Open in IMG/M
3300005941|Ga0070743_10188755Not Available678Open in IMG/M
3300006027|Ga0075462_10213025Not Available579Open in IMG/M
3300006752|Ga0098048_1031775Not Available1718Open in IMG/M
3300006793|Ga0098055_1146622Not Available909Open in IMG/M
3300006802|Ga0070749_10224091Not Available1071Open in IMG/M
3300006810|Ga0070754_10023350All Organisms → cellular organisms → Bacteria3564Open in IMG/M
3300006868|Ga0075481_10005966All Organisms → cellular organisms → Bacteria4889Open in IMG/M
3300006869|Ga0075477_10222514All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium767Open in IMG/M
3300006916|Ga0070750_10001353All Organisms → cellular organisms → Bacteria13664Open in IMG/M
3300006916|Ga0070750_10080985Not Available1523Open in IMG/M
3300006919|Ga0070746_10005768Not Available7229Open in IMG/M
3300006919|Ga0070746_10349198All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium671Open in IMG/M
3300006990|Ga0098046_1147737Not Available502Open in IMG/M
3300007539|Ga0099849_1076987Not Available1354Open in IMG/M
3300007553|Ga0102819_1002751Not Available3474Open in IMG/M
3300007553|Ga0102819_1056066All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium665Open in IMG/M
3300007555|Ga0102817_1047439All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium940Open in IMG/M
3300007557|Ga0102821_1046462Not Available1134Open in IMG/M
3300007558|Ga0102822_1119628Not Available621Open in IMG/M
3300007637|Ga0102906_1121382All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium719Open in IMG/M
3300007681|Ga0102824_1031368Not Available1416Open in IMG/M
3300008012|Ga0075480_10126436Not Available1409Open in IMG/M
3300009000|Ga0102960_1044318All Organisms → Viruses → Predicted Viral1641Open in IMG/M
3300009000|Ga0102960_1112624Not Available988Open in IMG/M
3300009001|Ga0102963_1031493Not Available2215Open in IMG/M
3300009024|Ga0102811_1135421All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium921Open in IMG/M
3300009027|Ga0102957_1275135Not Available612Open in IMG/M
3300009071|Ga0115566_10016848Not Available5415Open in IMG/M
3300009172|Ga0114995_10053000Not Available2311Open in IMG/M
3300009420|Ga0114994_10689012Not Available667Open in IMG/M
3300009436|Ga0115008_10000043All Organisms → cellular organisms → Bacteria70109Open in IMG/M
3300009437|Ga0115556_1081648Not Available1260Open in IMG/M
3300009437|Ga0115556_1084320All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium1234Open in IMG/M
3300009443|Ga0115557_1163965All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium891Open in IMG/M
3300009467|Ga0115565_10004879Not Available8965Open in IMG/M
3300009495|Ga0115571_1069359Not Available1583Open in IMG/M
3300009496|Ga0115570_10218077Not Available855Open in IMG/M
3300009507|Ga0115572_10675724Not Available564Open in IMG/M
3300010149|Ga0098049_1019728Not Available2228Open in IMG/M
3300011128|Ga0151669_151908Not Available529Open in IMG/M
3300017743|Ga0181402_1000035All Organisms → cellular organisms → Bacteria42857Open in IMG/M
3300017744|Ga0181397_1085792All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium837Open in IMG/M
3300017782|Ga0181380_1031729All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium1933Open in IMG/M
3300017786|Ga0181424_10115932Not Available1155Open in IMG/M
3300017950|Ga0181607_10623255Not Available565Open in IMG/M
3300019756|Ga0194023_1001501All Organisms → cellular organisms → Bacteria4585Open in IMG/M
3300019765|Ga0194024_1112140Not Available627Open in IMG/M
3300020166|Ga0206128_1000364All Organisms → cellular organisms → Bacteria53017Open in IMG/M
3300020166|Ga0206128_1056001All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium1886Open in IMG/M
3300020166|Ga0206128_1156144Not Available915Open in IMG/M
3300020175|Ga0206124_10063629Not Available1586Open in IMG/M
3300020182|Ga0206129_10020328All Organisms → cellular organisms → Bacteria5202Open in IMG/M
3300020182|Ga0206129_10058948Not Available2313Open in IMG/M
3300020182|Ga0206129_10221513All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium818Open in IMG/M
3300020187|Ga0206130_10380317Not Available573Open in IMG/M
3300020349|Ga0211511_1000999Not Available8441Open in IMG/M
3300021368|Ga0213860_10306495All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium693Open in IMG/M
3300021389|Ga0213868_10187018Not Available1252Open in IMG/M
3300021425|Ga0213866_10523334Not Available562Open in IMG/M
3300021957|Ga0222717_10042223Not Available2978Open in IMG/M
3300021957|Ga0222717_10499150Not Available655Open in IMG/M
3300021958|Ga0222718_10257389Not Available924Open in IMG/M
3300021959|Ga0222716_10147834All Organisms → cellular organisms → Bacteria1537Open in IMG/M
3300021964|Ga0222719_10214157Not Available1307Open in IMG/M
3300022074|Ga0224906_1078183Not Available1006Open in IMG/M
(restricted) 3300022920|Ga0233426_10002520Not Available15222Open in IMG/M
(restricted) 3300023109|Ga0233432_10000162All Organisms → cellular organisms → Bacteria → Proteobacteria61627Open in IMG/M
(restricted) 3300024264|Ga0233444_10235863Not Available822Open in IMG/M
3300024332|Ga0228659_1122831Not Available553Open in IMG/M
3300024346|Ga0244775_10018220Not Available6455Open in IMG/M
3300025070|Ga0208667_1041026Not Available781Open in IMG/M
3300025620|Ga0209405_1019266Not Available2908Open in IMG/M
3300025620|Ga0209405_1081871All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium977Open in IMG/M
3300025621|Ga0209504_1000380All Organisms → cellular organisms → Bacteria39474Open in IMG/M
3300025640|Ga0209198_1090272Not Available982Open in IMG/M
3300025653|Ga0208428_1002606All Organisms → cellular organisms → Bacteria7243Open in IMG/M
3300025654|Ga0209196_1167738Not Available592Open in IMG/M
3300025658|Ga0209659_1184979Not Available596Open in IMG/M
3300025694|Ga0209406_1022408Not Available2745Open in IMG/M
3300025759|Ga0208899_1044800Not Available1940Open in IMG/M
3300025810|Ga0208543_1071825Not Available838Open in IMG/M
3300025870|Ga0209666_1061653All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium1963Open in IMG/M
3300025892|Ga0209630_10087007Not Available1723Open in IMG/M
3300025894|Ga0209335_10312667All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium664Open in IMG/M
3300026183|Ga0209932_1035980Not Available1236Open in IMG/M
3300026203|Ga0207985_1081491Not Available774Open in IMG/M
3300027185|Ga0208672_1002633Not Available2076Open in IMG/M
3300027188|Ga0208921_1001099Not Available4938Open in IMG/M
3300027413|Ga0208950_1042679All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1151Open in IMG/M
3300027525|Ga0208437_1096128All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium683Open in IMG/M
3300027702|Ga0209036_1024675Not Available2093Open in IMG/M
3300027791|Ga0209830_10253582Not Available797Open in IMG/M
3300027830|Ga0209359_10090886Not Available1270Open in IMG/M
3300027833|Ga0209092_10000016All Organisms → cellular organisms → Bacteria140314Open in IMG/M
3300028128|Ga0228645_1070724All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium777Open in IMG/M
3300028189|Ga0257127_1195608Not Available533Open in IMG/M
3300028194|Ga0257106_1222753All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium640Open in IMG/M
3300028197|Ga0257110_1061608All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium1619Open in IMG/M
3300028197|Ga0257110_1084823Not Available1343Open in IMG/M
3300028287|Ga0257126_1201121Not Available622Open in IMG/M
3300031519|Ga0307488_10449142Not Available783Open in IMG/M
3300031569|Ga0307489_11274957Not Available532Open in IMG/M
3300032073|Ga0315315_10000154All Organisms → cellular organisms → Bacteria51769Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous11.67%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine11.67%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine10.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine9.17%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine8.33%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater6.67%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater4.17%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.17%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.17%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water4.17%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine3.33%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine3.33%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.50%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.50%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.50%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.50%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.67%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine1.67%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.67%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.83%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.83%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.83%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.83%
MarineEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine0.83%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001347Pelagic Microbial community sample from North Sea - COGITO 998_met_06EnvironmentalOpen in IMG/M
3300001349Pelagic Microbial community sample from North Sea - COGITO 998_met_10EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300002145S2t7BSb (114f)EnvironmentalOpen in IMG/M
3300003620Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300005606Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007553Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689EnvironmentalOpen in IMG/M
3300007555Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555EnvironmentalOpen in IMG/M
3300007557Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715EnvironmentalOpen in IMG/M
3300007558Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733EnvironmentalOpen in IMG/M
3300007637Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02EnvironmentalOpen in IMG/M
3300007681Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300011128Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020349Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289006-ERR315859)EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024332Seawater microbial communities from Monterey Bay, California, United States - 73DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025620Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)EnvironmentalOpen in IMG/M
3300025621Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)EnvironmentalOpen in IMG/M
3300025640Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025654Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)EnvironmentalOpen in IMG/M
3300025658Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025694Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026203Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84 (SPAdes)EnvironmentalOpen in IMG/M
3300027185Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689 (SPAdes)EnvironmentalOpen in IMG/M
3300027188Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)EnvironmentalOpen in IMG/M
3300027413Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027525Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 (SPAdes)EnvironmentalOpen in IMG/M
3300027702Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - DCM_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027830Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028128Seawater microbial communities from Monterey Bay, California, United States - 57DEnvironmentalOpen in IMG/M
3300028189Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_135mEnvironmentalOpen in IMG/M
3300028194Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10mEnvironmentalOpen in IMG/M
3300028197Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10mEnvironmentalOpen in IMG/M
3300028287Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1001675363300000117MarineMIKNDIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
JGI20156J14371_10002540233300001347Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNNSRKA*
JGI20156J14371_1001366923300001347Pelagic MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQEIKQNKSK*
JGI20156J14371_1014894413300001347Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDTLNAVQKARKAFQEIKQNKACN*
JGI20160J14292_1014227023300001349Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGSITQGITILDALNAVQKARKAFQEIKQNNSRKA*
JGI20160J14292_1019045433300001349Pelagic MarineVFCRLYHYIVYMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNNSRKA*
JGI20157J14317_1005756243300001352Pelagic MarineVFCRLYHYIVYMNIIEQTKYELDLDLDLGLALAEAEGDLNHLARESNSSDWQGSITQGITILDALNAVQKARKAFQEIKQNNSRKA*
JGI20157J14317_1009196333300001352Pelagic MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQKIKQNKSK*
S2t7BSb_1076108523300002145MarineMANIIEQTEKELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNKSK*
JGI26273J51734_1004744323300003620MarineMTNTIEQIKRELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILEALNAVQKARKAFQEIKRNKA*
Ga0055584_10020439343300004097Pelagic MarineMNIIEQTKYELDLDLNLGLALAKAEGNLNHLAHESNSSDWQGTITQGMAILDALNAVQEARKAFQEIKINKTKK*
Ga0065861_1008542383300004448MarineMIKNTLEQTRYELDLDLDLGLALAKAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKLNKVK*
Ga0065861_101311023300004448MarineMNIVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNKSK*
Ga0066222_101507523300004460MarineMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNKSK*
Ga0066835_1005089053300005606MarineMINLDEIKKELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGVTILDALNAVQKARKAFQEIKQNKIKKV*
Ga0070743_1007388623300005941EstuarineMGYIVYMIKNKTLEEVKHELDLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALNAVQKARKAFQEIKQNKSK*
Ga0070743_1018630913300005941EstuarineSEKKLVFCRFV*YIVYMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0070743_1018875513300005941EstuarineSEKKLVFCRFV*YIVYMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0075462_1021302523300006027AqueousMKNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0098048_103177533300006752MarineMTNIIEKTKEELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQKIKQNKSK*
Ga0098055_114662223300006793MarineMNKIEEIRTKLNRELDLGLALAKAEGNLSFLASESNQKNWKPSITQGIAILDALNAIQKARKAFQEIRQNK*
Ga0070749_1022409113300006802AqueousMKNIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0070754_1002335073300006810AqueousMLDFSGFLCYVIHMIKNNKVEEIRTELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0075481_1000596693300006868AqueousMLDFSGFLCYVIHMIKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0075477_1022251413300006869AqueousEIRKELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0070750_10001353383300006916AqueousMKNIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0070750_1008098533300006916AqueousMLDFSGFLCYVIHMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0070746_1000576863300006919AqueousMKNLIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0070746_1034919813300006919AqueousELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0098046_114773713300006990MarineMNKIEEIRTKLNRELDLGLALAKAEGNLSFLASESNQKNWKPSITQGIAILDALNAIQKARKAFQEIRHNK*
Ga0099849_107698713300007539AqueousMKNIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQEIKQNKLK*
Ga0102819_100275153300007553EstuarineMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0102819_105606623300007553EstuarineMIKNKTLEEVKHELDLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALNAVQKARKAFQQIKQNKSK*
Ga0102817_104743913300007555EstuarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0102821_104646243300007557EstuarineMIKNKTLEEVKHELDLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALNAVQKARKAFQEIKQNKSK*
Ga0102822_111962813300007558EstuarineMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0102906_112138213300007637EstuarineNLDLDLGLALAEAEGNLNYLARKSNSSDWKGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0102824_103136843300007681EstuarineMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQ
Ga0075480_1012643623300008012AqueousMIKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK*
Ga0102960_104431843300009000Pond WaterMIKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQQIKQNKSK*
Ga0102960_111262443300009000Pond WaterMIKNDIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0102963_103149383300009001Pond WaterKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQQIKQNKSK*
Ga0102811_113542133300009024EstuarineYIVYMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0102957_127513513300009027Pond WaterMIKNNKVKEIRKELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALNAVQKARKAFQQIKQNKSK*
Ga0115566_1001684893300009071Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGDLNHLARESNSSDWQGSITQGITILDALNAVQKARKAFQEIKQNNSRKA*
Ga0114995_1005300033300009172MarineMIKNKTLEEVKQELNLDLDLGLALAKAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARRSFQEIKQNKTK*
Ga0114994_1068901213300009420MarineMIKNKTLEEVKHELNLDLDLGLSLAEAEGNLNHLARESNSANWKGSITQGMTILDALNAVQKARKAFQEIKQNKSK*
Ga0115008_1000004383300009436MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQKIKQNKSK*
Ga0115556_108164813300009437Pelagic MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQEIKQNK*
Ga0115556_108432013300009437Pelagic MarineYIVYMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQKIKQNKSK*
Ga0115557_116396513300009443Pelagic MarineYIVYMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQEIKQNKSK*
Ga0115565_1000487913300009467Pelagic MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNNSRKA*
Ga0115571_106935923300009495Pelagic MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGSITQGITILDALNAVQKARKAFQEIKQNNSRKA*
Ga0115570_1021807723300009496Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGDLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQKIKQNKSK*
Ga0115572_1067572423300009507Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGSITQGITILDALNAVQKARKAFQEIKQN
Ga0098049_101972843300010149MarineMTNIIEKTKEELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQKIKQNKSR*
Ga0151669_15190813300011128MarineIEIKFAFSHFMGYIVYMIKNKTLEEVKHELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDELNAVQKTRKAFQEIKQNKSK*
Ga0181402_1000035263300017743SeawaterMINLNEIKKELDLDLDLGLALGEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQEIKRNKSK
Ga0181397_108579213300017744SeawaterEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0181380_103172923300017782SeawaterMIKNNKVEEIRKELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKTK
Ga0181424_1011593233300017786SeawaterMIKNNKVEEIRKELDLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0181607_1062325513300017950Salt MarshMNKTIEEIKKELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK
Ga0194023_100150133300019756FreshwaterMKNIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK
Ga0194024_111214023300019765FreshwaterMKNIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKA
Ga0206128_1000364403300020166SeawaterMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNLSDWKGTITQGITILDALNAVQKARKAFQEIKQNKSK
Ga0206128_105600133300020166SeawaterMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0206128_115614433300020166SeawaterMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDTLNAVQKARKAFQEIKQNKACN
Ga0206124_1006362913300020175SeawaterKKELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0206129_10020328103300020182SeawaterMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNNSRKA
Ga0206129_1005894813300020182SeawaterIVYMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQEIKQNK
Ga0206129_1022151313300020182SeawaterIVYMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNLSDWKGTITQGITILDALNAVQKARKAFQEIKQNKSK
Ga0206130_1038031723300020187SeawaterMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQEIKQNK
Ga0211511_1000999253300020349MarineMIKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0213860_1030649513300021368SeawaterMNKELVEQTKKEINLANDLGLALAKAEGNLNHLARESSDPEWQGTLTQGMAILDALDAVQKARKAHQQIINKILF
Ga0213868_1018701833300021389SeawaterMLDFSGFLCYVIHMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0213866_1052333423300021425SeawaterMIKNDIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKRNKSK
Ga0222717_1004222353300021957Estuarine WaterMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK
Ga0222717_1049915023300021957Estuarine WaterLGFLCYVIHMIKNNKIEEIKQELNLDLDLGLALAEAEGNLNHLARESNSANWKGSITQGMTILDALNAVQKARKAFQEIKQNKVCN
Ga0222718_1025738933300021958Estuarine WaterMLDFSGFLCYVIHMIKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQQIKQNK
Ga0222716_1014783433300021959Estuarine WaterMIKKNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNKSK
Ga0222719_1021415723300021964Estuarine WaterMPYVIHMIKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQQIKQNKSK
Ga0224906_107818313300022074SeawaterMNKTIEETTKELNLNLDVSLALAKAESNLNELARQSNSSDWKGTITQGIEILDALNAVQKAKKAFEEIKQNKSK
(restricted) Ga0233426_10002520343300022920SeawaterMNIVEQTKYELDLNLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK
(restricted) Ga0233432_10000162443300023109SeawaterMTNTIEQIKRELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILEALNAVQKARKAFQEIKRNKA
(restricted) Ga0233444_1023586313300024264SeawaterMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALNAVQKARKAFQQIKQNKSK
Ga0228659_112283113300024332SeawaterMLDFCRFVXYIVYMIKNNKVEEIRKELDLDLDLGLALAEAEGNLNHLARESNSANWKGSITQGMTILDALNAVQKARKAFQQIKQNKTK
Ga0244775_1001822023300024346EstuarineMGYIVYMIKNKTLEEVKHELDLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALNAVQKARKAFQEIKQNKSK
Ga0208667_104102613300025070MarineMTNIIEKTKEELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQKIKQNKSK
Ga0209405_101926633300025620Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGSITQGITILDALNAVQKARKAFQEIKQNNSRKA
Ga0209405_108187133300025620Pelagic MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQKIKQNKSK
Ga0209504_1000380353300025621Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGDLNHLARESNSSDWQGSITQGITILDALNAVQKARKAFQEIKQNNSRKA
Ga0209198_109027213300025640Pelagic MarineMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDTLNAVQKARKAFQEIKQNKA
Ga0208428_100260663300025653AqueousMLDFSGFLCYVIHMIKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0209196_116773813300025654Pelagic MarineYHYIVYMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQEIKQNNSRKA
Ga0209659_118497923300025658MarineMKNIIEETTEELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALKAVQKARKAFQKIKQNKSK
Ga0209406_102240843300025694Pelagic MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQEIKQNKSK
Ga0208899_104480053300025759AqueousMKNIIEQTKYELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK
Ga0208543_107182513300025810AqueousMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGVTILEALNAVQKARKAFQEIKQ
Ga0209666_106165333300025870MarineMKNIIEETTEELNLDLDLGLALGEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQKIKQNKSK
Ga0209630_1008700723300025892Pelagic MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGSITQGMTILDALNAVQKARKAFQKIKQNKSK
Ga0209335_1031266733300025894Pelagic MarineYHYIVYMNIIEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWKGTITQGITILDALNAVQKARKAFQEIKQNKSK
Ga0209932_103598023300026183Pond WaterMLDFSGFLCYVIHMIKNNKVEEIRKELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQQIKQNKSK
Ga0207985_108149113300026203MarineMINLDEIKKELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGVTILDALNAVQKARKAFQEIKQNKIKKV
Ga0208672_100263313300027185EstuarineMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0208921_100109973300027188EstuarineMIKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQK
Ga0208950_104267943300027413MarineMNIVEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQQIKQNKSK
Ga0208437_109612833300027525EstuarineKNNKVEEIRQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK
Ga0209036_102467553300027702MarineMINLEEIKKELNLDLDLGLALAEAEGNLNHLVRESNSLDWKGTITQSVTILHALNAVQKARKAFQEIKRNKTK
Ga0209830_1025358213300027791MarineMIKNKTLEEVKQELNLDLDLGLALAKAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARRSFQEIKQNKTK
Ga0209359_1009088643300027830MarineNLEEIKKELNLDLDLGLALAEAEGNLNHLVRESNSLDWKGTITQSVTILHALNAVQKARKAFQEIKRNKTK
Ga0209092_1000001683300027833MarineMIKNNKVEEIKQELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGITILDALNAVQKARKAFQKIKQNKSK
Ga0228645_107072423300028128SeawaterMIKNNKVEEIRKELDLDLDLGLALAEAEGNLNHLARESNSANWKGSITQGMTILDALNAVQKARKAFQQIKQNKTK
Ga0257127_119560823300028189MarineMTNIIEQTKQELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALNAVQKARKAFQQIKQN
Ga0257106_122275323300028194MarineMIKNIVEQTKYELDLDLDLGLALAEAEGNLNHLARESNKADWQGSITQGMTILDALNAVQKARKAFQEIKQNKSK
Ga0257110_106160813300028197MarineVIKNIVEQTKYELDLDLDLGLALAEAEGNLNHLARESNKADWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK
Ga0257110_108482333300028197MarineMIKKNSIEQTKHELDLDLDLGLALAKAEGNLNHLARESNSSDWKGTITQGITILDALNAVQLARKAFQEIKLNQSK
Ga0257126_120112123300028287MarineMNIVEQTKYELDLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARKAFQEIKQNKSK
Ga0307488_1044914223300031519Sackhole BrineMIKNKTLEQTRNELNLDLDIGLALAEAEGSLNHLARESNSSDWQGTITQGMTILDALNAVQKARRSFQEIKQNKTK
Ga0307489_1127495723300031569Sackhole BrineTRNELNLDLDLGLALAEAEGNLNHLARESNSSDWQGTITQGMTILDALNAVQKARRSFQEIKQNKTK
Ga0315315_10000154263300032073SeawaterMIKNNKVEQIRQELNLDLDLGLALAEAEGNLNHLARESNSADWQGTITQGITILDALNAVQKARKAFQQIKQNKSK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.