Metagenome / Metatranscriptome Family F073502

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073502
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	85 residues
Representative Sequence	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP
Number of Associated Samples	111
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.33 %
% of genes near scaffold ends (potentially truncated)	45.00 %
% of genes from short scaffolds (< 2000 bps)	95.83 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.167 % of family members)
Environment Ontology (ENVO)	Unclassified (30.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (32.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.02% β-sheet: 0.00% Coil/Unstructured: 56.98%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF04909	Amidohydro_2	27.50
PF04273	BLH_phosphatase	5.83
PF12697	Abhydrolase_6	0.83
PF02566	OsmC	0.83
PF13592	HTH_33	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3453	Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 family	General function prediction only [R]	5.83
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.83
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	58.33 %
Unclassified	root	N/A	20.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	58.33 %
Unclassified	root	N/A	20.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	58.33 %
Unclassified	root	N/A	20.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.83 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	58.33 %
Unclassified	root	N/A	20.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.83 %
Neisseriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae	0.83 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	58.33 %
Unclassified	root	N/A	20.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Neisseria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria	0.83 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.83 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	58.33 %
Unclassified	root	N/A	20.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.83 %
Neisseria meningitidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria → Neisseria meningitidis	0.83 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	58.33 %
Unclassified	root	N/A	20.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
unclassified Singulisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera	0.83 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.83 %
Neisseria meningitidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria → Neisseria meningitidis	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	58.33 %
Unclassified	root	N/A	20.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	0.83 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.83 %
Neisseria meningitidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria → Neisseria meningitidis	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000443\|F12B_10010398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300000559\|F14TC_100011879	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	839	Open in IMG/M
3300000956\|JGI10216J12902_115053796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300004267\|Ga0066396_10023700	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	848	Open in IMG/M
3300005168\|Ga0066809_10103669	Not Available	698	Open in IMG/M
3300005294\|Ga0065705_10995788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria → Neisseria meningitidis	541	Open in IMG/M
3300005332\|Ga0066388_104916838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300005438\|Ga0070701_10252763	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1065	Open in IMG/M
3300005445\|Ga0070708_100619059	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1020	Open in IMG/M
3300005471\|Ga0070698_101180236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	715	Open in IMG/M
3300005554\|Ga0066661_10621075	Not Available	640	Open in IMG/M
3300005555\|Ga0066692_10413550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	856	Open in IMG/M
3300005615\|Ga0070702_100728616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	759	Open in IMG/M
3300005764\|Ga0066903_106417230	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300005764\|Ga0066903_107997281	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300005844\|Ga0068862_100357714	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300005937\|Ga0081455_10018720	All Organisms → cellular organisms → Bacteria	6575	Open in IMG/M
3300006041\|Ga0075023_100141153	Not Available	878	Open in IMG/M
3300006047\|Ga0075024_100350114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300006058\|Ga0075432_10049483	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300006606\|Ga0074062_12550405	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300006844\|Ga0075428_101663850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300006844\|Ga0075428_101736867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	650	Open in IMG/M
3300006845\|Ga0075421_101123399	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300006846\|Ga0075430_100982374	Not Available	696	Open in IMG/M
3300006847\|Ga0075431_100782036	Not Available	928	Open in IMG/M
3300006853\|Ga0075420_101728349	Not Available	535	Open in IMG/M
3300006969\|Ga0075419_10026357	All Organisms → cellular organisms → Bacteria → Proteobacteria	3604	Open in IMG/M
3300009094\|Ga0111539_11002216	Not Available	971	Open in IMG/M
3300009156\|Ga0111538_11450569	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	865	Open in IMG/M
3300009162\|Ga0075423_10263358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1806	Open in IMG/M
3300009162\|Ga0075423_13017440	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300009553\|Ga0105249_10438533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1343	Open in IMG/M
3300009792\|Ga0126374_10423941	Not Available	937	Open in IMG/M
3300009792\|Ga0126374_11062784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300009818\|Ga0105072_1065875	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300010046\|Ga0126384_11772659	Not Available	585	Open in IMG/M
3300010047\|Ga0126382_10623233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	892	Open in IMG/M
3300010047\|Ga0126382_11407287	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300010358\|Ga0126370_10368382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1168	Open in IMG/M
3300010359\|Ga0126376_12771270	Not Available	540	Open in IMG/M
3300010361\|Ga0126378_12765149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300010362\|Ga0126377_11801111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	688	Open in IMG/M
3300010399\|Ga0134127_10564890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1161	Open in IMG/M
3300010400\|Ga0134122_10314361	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300011432\|Ga0137428_1016357	All Organisms → cellular organisms → Bacteria	1864	Open in IMG/M
3300012206\|Ga0137380_10279630	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300012207\|Ga0137381_10677748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	897	Open in IMG/M
3300012209\|Ga0137379_10657376	Not Available	954	Open in IMG/M
3300012212\|Ga0150985_116586876	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300012469\|Ga0150984_102463689	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300012922\|Ga0137394_11568050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300012927\|Ga0137416_11757399	Not Available	566	Open in IMG/M
3300012929\|Ga0137404_10844281	Not Available	833	Open in IMG/M
3300012930\|Ga0137407_10744228	Not Available	924	Open in IMG/M
3300012948\|Ga0126375_10324665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1080	Open in IMG/M
3300013306\|Ga0163162_11472023	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
3300016371\|Ga0182034_10943516	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	743	Open in IMG/M
3300016422\|Ga0182039_10924840	Not Available	779	Open in IMG/M
3300016445\|Ga0182038_10245695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1436	Open in IMG/M
3300017792\|Ga0163161_10169085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1670	Open in IMG/M
3300018075\|Ga0184632_10491766	Not Available	504	Open in IMG/M
3300018433\|Ga0066667_12174692	Not Available	516	Open in IMG/M
3300018466\|Ga0190268_10547536	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	802	Open in IMG/M
3300019255\|Ga0184643_1113636	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	623	Open in IMG/M
3300019255\|Ga0184643_1384013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300019360\|Ga0187894_10102644	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300020063\|Ga0180118_1352371	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1481	Open in IMG/M
3300021951\|Ga0222624_1014874	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	848	Open in IMG/M
3300022195\|Ga0222625_1000170	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300025961\|Ga0207712_10603513	Not Available	950	Open in IMG/M
3300027873\|Ga0209814_10025793	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300027880\|Ga0209481_10144271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1173	Open in IMG/M
3300027907\|Ga0207428_10180160	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300027909\|Ga0209382_10665119	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1125	Open in IMG/M
3300027909\|Ga0209382_11261179	Not Available	752	Open in IMG/M
3300027909\|Ga0209382_11461724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300028792\|Ga0307504_10001455	All Organisms → cellular organisms → Bacteria	4599	Open in IMG/M
3300028809\|Ga0247824_10825215	Not Available	575	Open in IMG/M
3300028878\|Ga0307278_10302118	Not Available	708	Open in IMG/M
3300028880\|Ga0307300_10351936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300030570\|Ga0247647_1003629	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300030829\|Ga0308203_1083579	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300030830\|Ga0308205_1002756	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1441	Open in IMG/M
3300030902\|Ga0308202_1161599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300030903\|Ga0308206_1153454	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300030904\|Ga0308198_1009470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1149	Open in IMG/M
3300030905\|Ga0308200_1069430	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	697	Open in IMG/M
3300030987\|Ga0308155_1015301	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	665	Open in IMG/M
3300030989\|Ga0308196_1030111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300030993\|Ga0308190_1004942	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300031039\|Ga0102760_10865741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1167	Open in IMG/M
3300031093\|Ga0308197_10026155	Not Available	1328	Open in IMG/M
3300031093\|Ga0308197_10035782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1199	Open in IMG/M
3300031096\|Ga0308193_1003715	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1496	Open in IMG/M
3300031114\|Ga0308187_10328070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300031184\|Ga0307499_10123089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	735	Open in IMG/M
3300031198\|Ga0307500_10152135	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300031421\|Ga0308194_10161581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	699	Open in IMG/M
3300031424\|Ga0308179_1004355	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1173	Open in IMG/M
3300031547\|Ga0310887_10310056	Not Available	903	Open in IMG/M
3300031680\|Ga0318574_10879187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300031681\|Ga0318572_10449602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	767	Open in IMG/M
3300031740\|Ga0307468_100091833	All Organisms → cellular organisms → Bacteria → Proteobacteria	1772	Open in IMG/M
3300031820\|Ga0307473_10236771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1110	Open in IMG/M
3300031854\|Ga0310904_10152815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1343	Open in IMG/M
3300031858\|Ga0310892_10811518	Not Available	649	Open in IMG/M
3300031892\|Ga0310893_10092942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1093	Open in IMG/M
3300032013\|Ga0310906_10058452	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1940	Open in IMG/M
3300032075\|Ga0310890_10463581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	955	Open in IMG/M
3300032076\|Ga0306924_11060816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	886	Open in IMG/M
3300032174\|Ga0307470_10802011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	729	Open in IMG/M
3300034659\|Ga0314780_001526	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300034660\|Ga0314781_038675	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300034661\|Ga0314782_006158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1674	Open in IMG/M
3300034667\|Ga0314792_015259	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1368	Open in IMG/M
3300034671\|Ga0314796_003994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1868	Open in IMG/M
3300034675\|Ga0314800_003485	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1476	Open in IMG/M
3300034680\|Ga0370541_002597	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1463	Open in IMG/M
3300034681\|Ga0370546_005837	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1308	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.33%
Host-Associated	Host-Associated	21.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.83%
Plants	Host-Associated → Plants	21.67%
Aquatic	Environmental → Aquatic	7.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.50%
Freshwater	Environmental → Aquatic → Freshwater	4.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.17%
Sediment	Environmental → Aquatic → Sediment	3.33%
Cave	Environmental → Terrestrial → Cave	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.67%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.33%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.83%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030570	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034675	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F12B_100103981	3300000443	Soil	SVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTRKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP*
F14TC_1000118792	3300000559	Soil	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVITSRRP*
JGI10216J12902_1150537961	3300000956	Soil	VPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQVEGRTLKKVLEQGGRDGAIRDAPASVRRPPRRPVIASRRP*
Ga0066396_100237002	3300004267	Tropical Forest Soil	VEKAVCIAYTPSGARVPQGLTMLAMQRFGGAVHQGAVRLLPALALGRRAGGHVQPGEVSPQEEMRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVMTSRRP*
Ga0066809_101036691	3300005168	Soil	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0065705_109957881	3300005294	Switchgrass Rhizosphere	VAKAVCIAYTPSGARVPQGLTMLAMQRCGGAVNQGAVRLLPALALGRRAGGHVQPGEVSPQEEMRTRKKVLEQGGRDGAIRAAPVSVRRPPRRP*
Ga0066388_1049168381	3300005332	Tropical Forest Soil	AMQRFGGAVNQGAVRLLPALALGRRAGGHVQPGEVSPQEEVRTRKKVLEQGGRDGAIRDAPASVRRPPRRPVIASRRP*
Ga0070701_102527632	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MPQGLTMLAMQRFGGAVHQGAVRLLPALALGRRAGGHVPPGEVSPQEEVRTRKKVLEHGGRDGAIRDAPAAVRRPPRRPVSASRRP*
Ga0070708_1006190592	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLAMQLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVMTSRRP*
Ga0070698_1011802362	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLEQGGRDGAIRAEPASVRRPPRRPVMTSRRP*
Ga0066661_106210752	3300005554	Soil	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP*
Ga0066692_104135501	3300005555	Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTLKKVLEQGGRDGAIRDEPASV
Ga0070702_1007286161	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PQGLTMLAMQRFGGAVHQGAVRLLPELALGRRAGGHVPPGEVSPQEEGRTRKKVLEHGGRDGAIRDAPAAVRRPPRRPVSASRRP*
Ga0066903_1064172301	3300005764	Tropical Forest Soil	APRAVAKAVCIAYTPSGARVPQGLTMLAMQRCGGAVPQGAGRLLPALALGRRAGGHVQPGEVSPQEEGRTRKKVLEHGGRDGAIRDAPAAVRRPPRRPVSASRRP*
Ga0066903_1079972811	3300005764	Tropical Forest Soil	QPSGRGAEAPRAVEKAVCISYTLSGASVPQGLTMLSMQRFGGAVNQGAVRLLPALALGRRAGGHVQPGAVSPQEEERTRKKVLEHGGRDGAIRAEPASVRRPPRRPVMTSRRP*
Ga0068862_1003577142	3300005844	Switchgrass Rhizosphere	MLSMKLFGGAVNQGAVRLLPELALGRRAGEHVQPGEVSQQEEGRTRKKVLEQGGRDGAIRDAPASVRWPPRRSVM
Ga0081455_100187202	3300005937	Tabebuia Heterophylla Rhizosphere	VAKAVCIAYTPSGARVPQGLTMLAMQRFGGAVNQGAVRLLPALALGRRAGGHVQPGEVSPQEEMRTRKKVLEHGGRDGAIRDEPASVRRPPRRPVITSRRP*
Ga0075023_1001411531	3300006041	Watersheds	VPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0075024_1003501142	3300006047	Watersheds	VPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEVRTLKKVLKQGGRDGAIRAEPASVRRPPRRPVIASRRP*
Ga0075432_100494831	3300006058	Populus Rhizosphere	YTPSGASVPQGLTMLAMQRFGGAVHQGALRLLPALALGRRAGGHVQPGEVSQQEEGRTRKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0074062_125504051	3300006606	Soil	PSGASVPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEGRTRKKVLKQGGRDGAIRAEPASVRRPPRRPVIASRRP*
Ga0075428_1016638501	3300006844	Populus Rhizosphere	FGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPAAVRRPPRRP*
Ga0075428_1017368671	3300006844	Populus Rhizosphere	VPQGLTMLAMQRFGGAVHQGALRLLPALARGRRAGGHVPPGEVSPQEEGRTRKKVLEHGGRDGAIRDAPAAVRRPPRRPVMTSRQP*
Ga0075421_1011233991	3300006845	Populus Rhizosphere	PQGLTMLAMQRFGGAVHQGAVRLLLALGRRAGGHVPPGEVSPQEAGRTRKKVLEHGGREGAIRDAPAAVRRPPRRP*
Ga0075430_1009823742	3300006846	Populus Rhizosphere	VPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVITSRRP*
Ga0075431_1007820362	3300006847	Populus Rhizosphere	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRAEPASVRRPPRRPVIASRRP*
Ga0075420_1017283491	3300006853	Populus Rhizosphere	VPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRAEPASVRRPPRRPVIASRRP*
Ga0075419_100263577	3300006969	Populus Rhizosphere	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0111539_110022161	3300009094	Populus Rhizosphere	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0111538_114505692	3300009156	Populus Rhizosphere	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0075423_102633581	3300009162	Populus Rhizosphere	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRAEPASVRRPPRRPVIASRRP*
Ga0075423_130174401	3300009162	Populus Rhizosphere	PRAVAKAVCIAYTLSGTSVPQGLTMLAMQRFGGAVNQGALRLLPALALGRRACGHVPPGEVSPQEEGRTRKKVLEHGGRDGAIRDAPAAVRRPPRRPVSASRRP*
Ga0105249_104385331	3300009553	Switchgrass Rhizosphere	MLSMKLFGGAVNQGAVRLLPELALGQRAGGHVQPGEVSPQEEMRTLKKVLEQGGRDGAIRDAPVSVRRPPRRP*
Ga0126374_104239411	3300009792	Tropical Forest Soil	MLAMQRFGGAVNQGAVRRLPELALGRRAGGHVQPGEVSQQEEVRTLKQVLKQGGRDGAIRDEPASVRRPPRRPVMASRRP*
Ga0126374_110627841	3300009792	Tropical Forest Soil	GRGAEAPRAVAKAVCIAYTPAGARVPQGLTMLAMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEMRTRKKVLEHGGRDGASRDAPASVRRPPRRP*
Ga0105072_10658752	3300009818	Groundwater Sand	MLSMKRFGGAVNQGAVRLLPELALGRRAGGDAPPGWICPQEEGRTQKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0126384_117726591	3300010046	Tropical Forest Soil	MLSMQRFGGAVNQGAVRLLPELVLGRRAGGHVQPGEVSQQEEVRPLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0126382_106232331	3300010047	Tropical Forest Soil	VAKAVCIAYTPAGARVPQGLTRLAMQRFGGAVHQGAVRLLPALALGRRAGGHVQPGEVSQQEEMRPLQKVLEQGGRDGAIRDEPASVRRPLRRPVMTSRRP*
Ga0126382_114072872	3300010047	Tropical Forest Soil	MLAIQRFGGAVNQGAVRLLPALALGRRAGGHVQPGEVSPQEEGRTRKKVLEHGGRDGAIRDAPAAVRRPPRRPVSASRRP*
Ga0126370_103683822	3300010358	Tropical Forest Soil	MEKKRTNSGPFMASTSKHSIYTPSGASVPQGLTMLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEGRTLQKVREQGGRDGAIRDAPASVRRPPRRPVMTSRRP*
Ga0126376_127712702	3300010359	Tropical Forest Soil	MLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVMTSRRP*
Ga0126378_127651492	3300010361	Tropical Forest Soil	GLTMLAMQRFGGAVHQGAVRLLPALALGRRAGGHVQPGEVSPQEEMRTRKKVLEHGGRDGAIRAEPASVRRPPRRPVMTSRRP*
Ga0126377_118011111	3300010362	Tropical Forest Soil	RAVAKAVCIAYTPSGARVPQGLTMLSMPRFGGAVNQGAVRLLPALARGRRAGGHVQPGEVSPQEEVRTQKKVLEQGGRDGAIRDEPASVRRPPRRP*
Ga0134127_105648902	3300010399	Terrestrial Soil	PSGASVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLEQGGRDGAIRDAPASVRRPPRRPVIASRRP*
Ga0134122_103143612	3300010400	Terrestrial Soil	VAKAVCIAYTLSGTSVPQGLTMLAMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTRKKVLEQGGRDGAIRDEPASVRRPPRRP*
Ga0137428_10163572	3300011432	Soil	MLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLEQGGRDGAIRDEPASVRRPPRRPVMTSRRP*
Ga0137380_102796302	3300012206	Vadose Zone Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0137381_106777481	3300012207	Vadose Zone Soil	MLSTKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0137379_106573762	3300012209	Vadose Zone Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVMTSRRP*
Ga0150985_1165868762	3300012212	Avena Fatua Rhizosphere	GASVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTRKKVLEQGGRGGAIRDEPASVRRPPRRPVIASRRP*
Ga0150984_1024636893	3300012469	Avena Fatua Rhizosphere	TMLSMQLFGGAVNQGAVRLLPELALGRRAGGHVQAGEVSQQEEVRPLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0137394_115680501	3300012922	Vadose Zone Soil	AVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0137416_117573991	3300012927	Vadose Zone Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGKVSQQEEVRTRKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP*
Ga0137404_108442811	3300012929	Vadose Zone Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASV
Ga0137407_107442281	3300012930	Vadose Zone Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0126375_103246652	3300012948	Tropical Forest Soil	VEKAVCIAYTPSGASVPQGLTMLSMQRFGGAVNQGALRLLPALALGRRAGGHVQPGEVSPQEEGRTRKKVLEHGGRDGAIRDAPASVRRPPRRP*
Ga0163162_114720232	3300013306	Switchgrass Rhizosphere	IQVMEKKRTNNGPLRESADKHSIYTPSGASVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEMRTRKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP*
Ga0182034_109435161	3300016371	Soil	EAPRAVAKAVCIAYTPSGARVPQGLTMLAMQRFGGAVHQGAVRLLPELALGRRAGGHVQPGEVSPQEEGRTLQKVLEHGGRDGAIRAAPASVRRPPRRPVIASRRP
Ga0182039_109248401	3300016422	Soil	MLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEGRPLQKVLEHGGRDGAIRAAPASVRRPPRRPVIASRRP
Ga0182038_102456953	3300016445	Soil	MLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEGRTLQKVLEHGGRDGAIRAAPASVRRPPRRPVIASRRP
Ga0163161_101690851	3300017792	Switchgrass Rhizosphere	PSGARVPQGLTMLAMQRFGGAVNQGAVRLLPALALGRRAGGHVQPGEVSPQEEMRTLKKVLEQGGRDGAIRDEPASVRRPPRRP
Ga0184632_104917661	3300018075	Groundwater Sediment	VPQGLTMLSTKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0066667_121746922	3300018433	Grasslands Soil	MLSMQLFGGAGNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLEHGGRDGAIRDAPASVRRPPRRPVM
Ga0190268_105475362	3300018466	Soil	MEKKLTNSGPLMESADKHSIYTPSGASVPQGLTMLSMKLFGGAVNQGAVRLLPEFALGRRAGGHVQPGEVSQQEEVRTRKKVLEQGGRDGAIRDEPASVRRPRRRPVMTSRRP
Ga0184643_11136361	3300019255	Groundwater Sediment	SVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRADGHVQPGDVSQQEEVRTLKKVLEQGGRDGAIRAEPASVRRPPRRP
Ga0184643_13840132	3300019255	Groundwater Sediment	VNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVMTSRRP
Ga0187894_101026443	3300019360	Microbial Mat On Rocks	VPQGLTMLSMQRFGGAVHQGTVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVGRPPRRPVMASRRP
Ga0180118_13523711	3300020063	Groundwater Sediment	KLALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0222624_10148741	3300021951	Groundwater Sediment	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0222625_10001702	3300022195	Groundwater Sediment	MLSTKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0207712_106035131	3300025961	Switchgrass Rhizosphere	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTRKKVLKQGGRDGAIRDEPAAVRRPPRRPVIASRRP
Ga0209814_100257931	3300027873	Populus Rhizosphere	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0209481_101442711	3300027880	Populus Rhizosphere	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0207428_101801603	3300027907	Populus Rhizosphere	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0209382_106651192	3300027909	Populus Rhizosphere	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPAAVRRPPRRP
Ga0209382_112611791	3300027909	Populus Rhizosphere	MLAMQRFGGAVNQGAVRLLPALALGRRAGGHVQPGEVSPQEEMRTRKKVLEQGGRDGAIRDAPVSV
Ga0209382_114617241	3300027909	Populus Rhizosphere	SGASVPQGLTMLAMQRFGGAVHQGAVRLLLALGRRAGGHVPPGEVSPQEAGRTRKKVLEHGGREGAIRDAPAAVRRPPRRP
Ga0307504_100014555	3300028792	Soil	TPSGASVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRPLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0247824_108252151	3300028809	Soil	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLKQGGRDGAIRDEPASVRRPPRRP
Ga0307278_103021181	3300028878	Soil	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0307300_103519361	3300028880	Soil	TPSGASVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0247647_10036291	3300030570	Soil	AVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLEQGGRDGAIRDAPASVRRPPRRPVMTSRRP
Ga0308203_10835792	3300030829	Soil	AEAPRAVEKAVCIAYTLSRASVPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0308205_10027561	3300030830	Soil	VPQGLTMLSMKLFGGAVNQDAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0308202_11615991	3300030902	Soil	PSGASVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0308206_11534541	3300030903	Soil	IESVRKRSLPTAARWVPADKHSIYTPSGASVPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0308198_10094702	3300030904	Soil	FLLHGKTFGFMEKKLINSGRFREPADKHSIYTPSGASVPQGLTMLSMKLFGGAVNQDAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0308200_10694301	3300030905	Soil	LTMLSTKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0308155_10153012	3300030987	Soil	LTMLSTKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0308196_10301111	3300030989	Soil	QGAVRLLPELALGRRADGHVQPGEVSQQEEVLTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0308190_10049421	3300030993	Soil	MEKKLTNSGRFREPADKHSIYTPSGASVPQGLTMLSTKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0102760_108657412	3300031039	Soil	VNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDAPASVCRPPRRPVITLRRP
Ga0308197_100261551	3300031093	Soil	VPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0308197_100357822	3300031093	Soil	VPQGLTMLSMKLFGGAVNQDAVRLLPELALGRRAGGHVQPGEVSQQEKVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0308193_10037152	3300031096	Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0308187_103280701	3300031114	Soil	MLSTKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0307499_101230892	3300031184	Soil	LSMQRFGGAVNQGAVRLLPALALGRRAGGHVQPGEVSQQEEVRTRKKVLKQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0307500_101521351	3300031198	Soil	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTRKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0308194_101615811	3300031421	Soil	KLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0308179_10043552	3300031424	Soil	VPQGLTMLSMKLFGGAVNQDAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSGRP
Ga0310887_103100562	3300031547	Soil	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLEQGGRDGAIRDEPASVR
Ga0318574_108791871	3300031680	Soil	MLSMQRFGGAVNQGAVRLLPELVLGRRAGGHVQLGEVSPQEEGRTLQKVLEHGGRDGAIRAAPASVRRPPRRPVIASRRP
Ga0318572_104496021	3300031681	Soil	YTPSGASVPQGLTMLSMQRFGGAVHQGAVRLLPELALGRRAGGHVQPGEVSPQEEGRTLQKVLEHGGRDGAIRAAPASVRRPPRRPVIASRRP
Ga0307468_1000918331	3300031740	Hardwood Forest Soil	VPQGLTMLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0307473_102367712	3300031820	Hardwood Forest Soil	VPQGLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEMRTRKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0310904_101528152	3300031854	Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0310892_108115181	3300031858	Soil	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTRKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0310893_100929422	3300031892	Soil	YTPSGASVPQDLTMLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0310906_100584522	3300032013	Soil	VPQGLTMLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQLGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0310890_104635812	3300032075	Soil	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0306924_110608162	3300032076	Soil	TSVPQGLTMLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSPQEEGRTLQKVLEHGGRDGAIRAAPASVRRPPRRP
Ga0307470_108020112	3300032174	Hardwood Forest Soil	LFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0314780_001526_69_311	3300034659	Soil	MLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0314781_038675_366_608	3300034660	Soil	MLSMKLFGGAVNQGAVRLLPELALGRRAGGHVQLGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0314782_006158_1382_1624	3300034661	Soil	MLSMQRFGGAVNQGAVRLLPELALGRRAGGHVQLGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0314792_015259_59_301	3300034667	Soil	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLKQGGRDGAIRDEPASVRRPPRRPVIASRRP
Ga0314796_003994_23_244	3300034671	Soil	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQLGEVSQQEEVRTLKKVLKQGGRDGAIRDEPAAVRRPPRRP
Ga0314800_003485_1197_1439	3300034675	Soil	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEGRTRKKVLKQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0370541_002597_1079_1321	3300034680	Soil	MLSMKRFGGAVNQGAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVITSRRP
Ga0370546_005837_921_1163	3300034681	Soil	MLSMKLFGGAVNQDAVRLLPELALGRRAGGHVQPGEVSQQEEVRTLKKVLEQGGRDGAIRDEPASVRRPPRRPVIASRRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073502

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences