Metagenome Family F073662

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073662
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	43 residues
Representative Sequence	PINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI
Number of Associated Samples	78
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (22.500 % of family members)
Environment Ontology (ENVO)	Unclassified (76.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (79.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.65% β-sheet: 0.00% Coil/Unstructured: 57.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF02606	LpxK	81.67
PF04413	Glycos_transf_N	6.67
PF03717	PBP_dimer	0.83
PF00664	ABC_membrane	0.83
PF05726	Pirin_C	0.83
PF00005	ABC_tran	0.83
PF00009	GTP_EFTU	0.83
PF13177	DNA_pol3_delta2	0.83
PF00271	Helicase_C	0.83
PF00107	ADH_zinc_N	0.83
PF00589	Phage_integrase	0.83
PF13419	HAD_2	0.83
PF06267	DUF1028	0.83
PF01709	Transcrip_reg	0.83
PF03626	COX4_pro	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1663	Tetraacyldisaccharide-1-P 4'-kinase (Lipid A 4'-kinase)	Cell wall/membrane/envelope biogenesis [M]	81.67
COG1519	3-deoxy-D-manno-octulosonic-acid transferase	Cell wall/membrane/envelope biogenesis [M]	6.67
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	0.83
COG0768	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	Cell cycle control, cell division, chromosome partitioning [D]	0.83
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.83
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	0.83
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
All Organisms	root	All Organisms	27.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
cellular organisms	root	All Organisms → cellular organisms	27.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.17 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	22.50 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	22.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	0.83 %
Deltaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	20.83 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	0.83 %
SAR324 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster	0.83 %
unclassified Candidatus Thioglobus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → unclassified Candidatus Thioglobus	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.50 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5.83 %
SAR324 cluster bacterium JCVI-SC AAA005	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium JCVI-SC AAA005	0.83 %
alpha proteobacterium HIMB59	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	0.83 %
Candidatus Thioglobus sp. NP1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → unclassified Candidatus Thioglobus → Candidatus Thioglobus sp. NP1	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000251\|LPjun08P16500mDRAFT_1032333	Not Available	563	Open in IMG/M
3300001522\|Mariner_1049617	Not Available	914	Open in IMG/M
3300005593\|Ga0066837_10348926	Not Available	516	Open in IMG/M
3300005604\|Ga0066852_10120746	Not Available	928	Open in IMG/M
3300005605\|Ga0066850_10248811	Not Available	634	Open in IMG/M
3300006077\|Ga0081594_1242311	Not Available	634	Open in IMG/M
3300006090\|Ga0082015_1041710	Not Available	742	Open in IMG/M
3300006308\|Ga0068470_1423289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300006313\|Ga0068472_10280085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium JCVI-SC AAA005	4227	Open in IMG/M
3300006313\|Ga0068472_10309288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1491	Open in IMG/M
3300006313\|Ga0068472_10392818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2049	Open in IMG/M
3300006313\|Ga0068472_10916761	Not Available	663	Open in IMG/M
3300006323\|Ga0068497_1099472	Not Available	605	Open in IMG/M
3300006323\|Ga0068497_1163970	Not Available	723	Open in IMG/M
3300006330\|Ga0068483_1356044	Not Available	514	Open in IMG/M
3300006331\|Ga0068488_1459714	Not Available	638	Open in IMG/M
3300006336\|Ga0068502_1267866	Not Available	1132	Open in IMG/M
3300006336\|Ga0068502_1305162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1453	Open in IMG/M
3300006336\|Ga0068502_1451078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → unclassified Candidatus Thioglobus → Candidatus Thioglobus sp. NP1	649	Open in IMG/M
3300006336\|Ga0068502_1757430	Not Available	711	Open in IMG/M
3300006338\|Ga0068482_1457376	Not Available	746	Open in IMG/M
3300006338\|Ga0068482_1722738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	622	Open in IMG/M
3300006341\|Ga0068493_10197009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	10311	Open in IMG/M
3300006341\|Ga0068493_10408131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1875	Open in IMG/M
3300006341\|Ga0068493_10445060	Not Available	749	Open in IMG/M
3300006341\|Ga0068493_10642543	Not Available	1231	Open in IMG/M
3300006341\|Ga0068493_11138110	Not Available	510	Open in IMG/M
3300006346\|Ga0099696_1111680	Not Available	881	Open in IMG/M
3300006346\|Ga0099696_1308454	Not Available	507	Open in IMG/M
3300006347\|Ga0099697_1434103	Not Available	773	Open in IMG/M
3300006567\|Ga0099958_1094216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1444	Open in IMG/M
3300007160\|Ga0099959_1061362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3043	Open in IMG/M
3300007283\|Ga0066366_10305716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	676	Open in IMG/M
3300007283\|Ga0066366_10309623	Not Available	672	Open in IMG/M
3300007291\|Ga0066367_1151989	Not Available	874	Open in IMG/M
3300007291\|Ga0066367_1264550	Not Available	670	Open in IMG/M
3300007291\|Ga0066367_1399950	Not Available	550	Open in IMG/M
3300007504\|Ga0104999_1151152	Not Available	813	Open in IMG/M
3300007514\|Ga0105020_1233429	Not Available	1238	Open in IMG/M
3300007515\|Ga0105021_1149040	All Organisms → cellular organisms → Bacteria → Proteobacteria	1363	Open in IMG/M
3300007777\|Ga0105711_1156555	Not Available	875	Open in IMG/M
3300008629\|Ga0115658_1067959	All Organisms → cellular organisms → Bacteria → Proteobacteria	2114	Open in IMG/M
3300008735\|Ga0115657_1029740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4476	Open in IMG/M
3300008954\|Ga0115650_1357796	Not Available	692	Open in IMG/M
3300009104\|Ga0117902_1108944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3010	Open in IMG/M
3300009104\|Ga0117902_1402272	Not Available	1213	Open in IMG/M
3300009104\|Ga0117902_1417808	Not Available	1180	Open in IMG/M
3300009108\|Ga0117920_1027609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2950	Open in IMG/M
3300009109\|Ga0117922_1070520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1882	Open in IMG/M
3300009126\|Ga0118723_1211290	Not Available	1056	Open in IMG/M
3300009126\|Ga0118723_1251366	Not Available	919	Open in IMG/M
3300009370\|Ga0118716_1201692	Not Available	937	Open in IMG/M
3300009376\|Ga0118722_1142290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1550	Open in IMG/M
3300009409\|Ga0114993_10020783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5467	Open in IMG/M
3300009409\|Ga0114993_10361707	Not Available	1095	Open in IMG/M
3300009409\|Ga0114993_10607062	Not Available	804	Open in IMG/M
3300009481\|Ga0114932_10586112	Not Available	653	Open in IMG/M
3300009703\|Ga0114933_10444897	Not Available	845	Open in IMG/M
3300009703\|Ga0114933_10926793	Not Available	553	Open in IMG/M
3300009705\|Ga0115000_10044214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3069	Open in IMG/M
3300009706\|Ga0115002_10326781	Not Available	1151	Open in IMG/M
3300009706\|Ga0115002_10329614	Not Available	1145	Open in IMG/M
3300009706\|Ga0115002_10491400	Not Available	894	Open in IMG/M
3300009786\|Ga0114999_10174032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1805	Open in IMG/M
3300009786\|Ga0114999_10471265	Not Available	974	Open in IMG/M
3300009786\|Ga0114999_10705049	Not Available	755	Open in IMG/M
3300010883\|Ga0133547_10205018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	4196	Open in IMG/M
3300010883\|Ga0133547_10287105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3427	Open in IMG/M
3300010883\|Ga0133547_11842851	Not Available	1116	Open in IMG/M
3300012950\|Ga0163108_10273183	Not Available	1087	Open in IMG/M
3300012954\|Ga0163111_10717464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB59	945	Open in IMG/M
3300012954\|Ga0163111_12310291	Not Available	545	Open in IMG/M
3300013110\|Ga0171652_1049850	Not Available	1102	Open in IMG/M
3300013110\|Ga0171652_1097945	Not Available	641	Open in IMG/M
3300013115\|Ga0171651_1004684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	7538	Open in IMG/M
3300020254\|Ga0211669_1042073	Not Available	638	Open in IMG/M
3300020369\|Ga0211709_10128945	Not Available	774	Open in IMG/M
3300020369\|Ga0211709_10185917	Not Available	628	Open in IMG/M
3300020375\|Ga0211656_10157057	Not Available	694	Open in IMG/M
3300020399\|Ga0211623_10315755	Not Available	557	Open in IMG/M
3300020412\|Ga0211552_10096180	Not Available	1006	Open in IMG/M
3300020415\|Ga0211553_10034764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2211	Open in IMG/M
3300020427\|Ga0211603_10250725	Not Available	669	Open in IMG/M
3300020428\|Ga0211521_10223629	Not Available	854	Open in IMG/M
3300020444\|Ga0211578_10450052	Not Available	539	Open in IMG/M
3300020445\|Ga0211564_10394998	Not Available	679	Open in IMG/M
3300021068\|Ga0206684_1110893	Not Available	923	Open in IMG/M
3300021084\|Ga0206678_10155671	Not Available	1155	Open in IMG/M
3300022225\|Ga0187833_10619691	Not Available	535	Open in IMG/M
3300022227\|Ga0187827_10258375	Not Available	1144	Open in IMG/M
3300022227\|Ga0187827_10359875	Not Available	916	Open in IMG/M
3300025235\|Ga0208206_1042374	Not Available	580	Open in IMG/M
3300026074\|Ga0208747_1001726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	6568	Open in IMG/M
3300026262\|Ga0207990_1113920	Not Available	670	Open in IMG/M
3300027827\|Ga0209035_10648483	Not Available	500	Open in IMG/M
3300027844\|Ga0209501_10417567	Not Available	790	Open in IMG/M
3300027847\|Ga0209402_10278963	Not Available	1053	Open in IMG/M
3300028487\|Ga0257109_1062349	Not Available	1175	Open in IMG/M
3300028489\|Ga0257112_10109349	Not Available	1001	Open in IMG/M
3300028535\|Ga0257111_1008920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3658	Open in IMG/M
3300028535\|Ga0257111_1113496	Not Available	848	Open in IMG/M
3300028535\|Ga0257111_1178897	Not Available	638	Open in IMG/M
3300028535\|Ga0257111_1218771	Not Available	561	Open in IMG/M
3300031800\|Ga0310122_10139926	Not Available	1168	Open in IMG/M
3300031801\|Ga0310121_10059468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2544	Open in IMG/M
3300031802\|Ga0310123_10444987	Not Available	825	Open in IMG/M
3300031802\|Ga0310123_10447715	Not Available	822	Open in IMG/M
3300031802\|Ga0310123_10934813	Not Available	507	Open in IMG/M
3300031802\|Ga0310123_10940421	Not Available	505	Open in IMG/M
3300031803\|Ga0310120_10151610	Not Available	1296	Open in IMG/M
3300031803\|Ga0310120_10583277	Not Available	551	Open in IMG/M
3300031861\|Ga0315319_10231320	Not Available	932	Open in IMG/M
3300031861\|Ga0315319_10359774	Not Available	732	Open in IMG/M
3300032006\|Ga0310344_10125284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2154	Open in IMG/M
3300032011\|Ga0315316_10057396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3118	Open in IMG/M
3300032011\|Ga0315316_10137196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2022	Open in IMG/M
3300032048\|Ga0315329_10491471	Not Available	653	Open in IMG/M
3300032278\|Ga0310345_10963202	Not Available	833	Open in IMG/M
3300032278\|Ga0310345_12371710	Not Available	512	Open in IMG/M
3300032360\|Ga0315334_11325364	Not Available	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	64.17%
Coastal	Environmental → Aquatic → Marine → Coastal	15.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.17%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.67%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.50%
Volcanic	Environmental → Aquatic → Marine → Volcanic	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	40.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.00%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	13.33%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	10.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	2.50%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.67%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.83%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	22.50%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	14.17%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	13.33%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	11.67%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.17%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	8.33%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	6.67%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	5.00%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	2.50%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.67%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.83%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.83%
Water Column	Environmental → Aquatic → Marine → Coastal → Unclassified → Water Column	0.83%
Diffuse Vent Fluid, Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents	0.83%
Diffuse Hydrothermal Fluid	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid	0.83%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vent Plume	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000251	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P16 500m	Environmental	Open in IMG/M
3300001522	Hydrothermal vent plume microbial communities from Mariner/Tui Malila, Pacific Ocean, of black smokers	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300006077	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid B	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300007283	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300007504	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007515	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300007777	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS918_NRZ_DNA CLC_assembly	Environmental	Open in IMG/M
3300008629	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um	Environmental	Open in IMG/M
3300008735	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um	Environmental	Open in IMG/M
3300008954	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009108	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009109	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009126	Combined Assembly of Gp0139357, Gp0139356	Environmental	Open in IMG/M
3300009370	Combined Assembly of Gp0127930, Gp0127931	Environmental	Open in IMG/M
3300009376	Combined Assembly of Gp0137079, Gp0137080	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013110	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300013115	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300020254	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555924-ERR599085)	Environmental	Open in IMG/M
3300020369	Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556016-ERR599044)	Environmental	Open in IMG/M
3300020375	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX555974-ERR599132)	Environmental	Open in IMG/M
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental	Open in IMG/M
3300020412	Marine microbial communities from Tara Oceans - TARA_B100001167 (ERX556053-ERR599047)	Environmental	Open in IMG/M
3300020415	Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)	Environmental	Open in IMG/M
3300020427	Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300021068	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025235	Marine microbial communities from the Deep Pacific Ocean - MP1483 (SPAdes)	Environmental	Open in IMG/M
3300026074	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026262	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental	Open in IMG/M
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental	Open in IMG/M
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun08P16500mDRAFT_10323331	3300000251	Marine	SKFPNPILIFCLIIFFDQKRGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI*
Mariner_10496171	3300001522	Hydrothermal Vent Plume	ILPRFDAFLRPIILKMQNKEIILVNSKKYLIIFI*
Ga0066837_103489262	3300005593	Marine	NNGPINFPKMAPRFEAFFRPIILKMMNKEIILMNSKKYLIVFI*
Ga0066852_101207461	3300005604	Marine	TLPRFDAFLKPIILKIQNNEIILTHSKKYLIIFI*
Ga0066850_102488111	3300005605	Marine	DLKNGPINFPRMLPIFDAFLRPIILNMQNSDIILINSKKYLITFI*
Ga0081594_12423112	3300006077	Diffuse Hydrothermal Fluid	INLPSMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI*
Ga0082015_10417101	3300006090	Marine	FPKMAPKFEAFFRPIILKMVNKEIIPMNSKKYLIVFI*
Ga0068470_14232892	3300006308	Marine	PINLPSMLPRFDAFLRPTILNMQNKEIMLINSKKYLIIFI*
Ga0068472_102800855	3300006313	Marine	DLNSGPTNLPSILPIFDAFLRPIILKIENKEIMHINSKK*
Ga0068472_103092881	3300006313	Marine	KYFPNKDPRLDELVRPIILNIENKEIMLMNSKKYLIIFI*
Ga0068472_103928184	3300006313	Marine	PRTLPRLDAFLRPIILKIQNNEIMLINSKKYLMIFI*
Ga0068472_109167612	3300006313	Marine	PRMLPRLDAFLSPIILKMQNKEIIIINSKKYFIIFIYFFLLIL*
Ga0068497_10994721	3300006323	Marine	VIFFDLKKGPIDFPNKLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI*
Ga0068497_11639701	3300006323	Marine	SIAPRLDAFLSPIILKMQNKEIMLINSKKYLIIFI*
Ga0068483_13560442	3300006330	Marine	SLPSTLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI*
Ga0068488_14597143	3300006331	Marine	DLNNGPIYLPRILPRFDAFRKPIILNIENKEIMLMNSKKYLIIFI*
Ga0068502_12678663	3300006336	Marine	FPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI*
Ga0068502_13051621	3300006336	Marine	YLPSTLPRLDAFLKPIILKILNREIMLINSKKYLTIFI*
Ga0068502_14510781	3300006336	Marine	SVIFFDLKKGPISLPSILPRFDAFLRPTILKMQNKEIMLINSKKYLIIFI*
Ga0068502_17574302	3300006336	Marine	LDAFFSPIILKMQNKEIIITNSKKYFIIFIYFFLLIL*
Ga0068482_14573761	3300006338	Marine	TDLPKILPRFDAFLRPIILKIENKEIMLMNSKKYLIIFI*
Ga0068482_17227383	3300006338	Marine	LKPVINLPNMLPRFDAFLRPIILKMQNKEIMLMNSKKYLTIFI*
Ga0068493_101970091	3300006341	Marine	NPIFIFCLVIFFDLNNGPIDLPKKLPRFDAFLRPIILKIQNKEIMLMNSKKYLITLYDSIY*
Ga0068493_104081311	3300006341	Marine	TLPRLDAFLRPIILKMQNNEIMLINSKKYLIIFI*
Ga0068493_104450601	3300006341	Marine	IFFLITSFDLNKGPINLPSMLPRFDAFFRPIILKIQNKEITLMNSKKYLKIFI*
Ga0068493_106425433	3300006341	Marine	PTNLPSKLPRFDAFLRPIILKIENKEIMLMNSKKYLIIFI*
Ga0068493_111381102	3300006341	Marine	LVISFDLNNGPIDLPKILPRLDAFLRPIILKIQNKEIMLINSKKYLTIFI*
Ga0099696_11116801	3300006346	Marine	FDLNNGPINLPRTLPRFDAFFRPIILKIENKEIMLINSKKYLIIFI*
Ga0099696_13084541	3300006346	Marine	RMLPRFDAFFRPIILKIQNKEIIVMNSKKYLIIFI*
Ga0099697_14341031	3300006347	Marine	GPTDFPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI*
Ga0099958_10942163	3300006567	Marine	PTDFPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI*
Ga0099959_10613621	3300007160	Marine	NNGPIDLPKILPRLDAFLRPIILKIQNNEIMLINSKKYLIIFI*
Ga0066366_103057161	3300007283	Marine	NKGPTTLPIILPRLDAFLRPKILKIQNNDMIAADSKKYFTIFI*
Ga0066366_103096231	3300007283	Marine	NNGPIVFPKMLPRFDALRNPIILKIENNEIMLINSKKYLIIFI*
Ga0066367_11519891	3300007291	Marine	MISFDLNKGPIDLTIILPRLDAFLRPIILNIQNKEITIINSKKYLIIFI*
Ga0066367_12645502	3300007291	Marine	FDLNSGPINLPSILPRFDAFLRPTILKIQNKEIMLMNSKKYLTIFI*
Ga0066367_13999502	3300007291	Marine	NGPISFPKTLPRFEAFLNPIILKIQNNEIMLINSKKYLTIFI*
Ga0104999_11511522	3300007504	Water Column	FMIFFDLNIGPKNFPMRPPMLDAFFKPIILKIQNKEITLINSKKYFIIFI*
Ga0105020_12334293	3300007514	Marine	ISPNPVLIFCLIIFFDLNSGPIDLPKILPILDAFLRPIILKMQNNEIMHINSKKYLIIFI
Ga0105021_11490403	3300007515	Marine	KALPRFEAFFRPIILKIQNSEIILTNSKKYLIIFI*
Ga0105711_11565551	3300007777	Diffuse Vent Fluid, Hydrothermal Vents	KPPRFDAFLRPIILKMQNKEIILTNSKKYLIIFI*
Ga0115658_10679591	3300008629	Marine	IFFDLKNGPTDIPKTLPRFDAFFKPIILNIQNKEIIHINSKKYLNIFI*
Ga0115657_10297401	3300008735	Marine	FDLNIGPIDFPIIQPRLDAFLRPIILNIQNREIMIINSKKYLIIFI*
Ga0115650_13577962	3300008954	Marine	LTIIFDLNKGPMNLPKIPPRYDAFFKPIILKIQNNEIMLINSKKYLKIFI*
Ga0117902_11089441	3300009104	Marine	LNIGPKNFPMRPPMLDAFFKPIILKIQNKEITLINSKKYFIIFI*
Ga0117902_14022721	3300009104	Marine	PSTLPRLEAFLRPIILKIQNREIMLINSKKYLIIFI*
Ga0117902_14178081	3300009104	Marine	IFCLVISLDLNKGPINLPSILPRLEAFLRPIILNIKNKEIILINSKKYLIIFI*
Ga0117920_10276094	3300009108	Marine	NSGPTNLPSTLPRSEAFLRPIILKIQKKEIMLINSKKYLTIFI*
Ga0117922_10705203	3300009109	Marine	NPILIFCFVVFLDLKKGPNNLPSILPRLEAYLSPIILKIQKREITLVNSIKYFKIFI*
Ga0118723_12112902	3300009126	Marine	SFDLNNGPINFPKMAPTFEAFFRPIILKMVNKEIILMNSKKYLIVFI*
Ga0118723_12513661	3300009126	Marine	MLPRFDAFLKPIILKIENREIIIINSKKYLMIFI*
Ga0118716_12016922	3300009370	Marine	KIPPRYDAFFKPIILKIQNNEIMLINSKKYLKIFI*
Ga0118722_11422903	3300009376	Marine	KIPPAIDEFLRPIILNMQNSEMILINSKKYLIIFIIFS*
Ga0114993_100207831	3300009409	Marine	LDLNSGPTSLPSTLPKSDAYLRPIILKIKNREIILINSIKYFMTFI*
Ga0114993_103617072	3300009409	Marine	FPIIPPRLDAFLRPIILKIQNKEITLINSKKYLMGFI*
Ga0114993_106070622	3300009409	Marine	FFDLNNGKIDLPKILPRFDAFLRPTILKIQNNEIMIINSKKYLTIFI*
Ga0114932_105861122	3300009481	Deep Subsurface	KMLPRLDAFFRPIILNIQNKEITLINSKKYLIIFI*
Ga0114933_104448972	3300009703	Deep Subsurface	FFDLNNGPTIIPKKLPRLEAFLGPIILKITNKDIILINSTRYFINFI*
Ga0114933_109267932	3300009703	Deep Subsurface	IFCLIIFFDLNIGPINFPKIDPRFDAFLKPIILKIQNNEITLTNSKKYLIIFI*
Ga0115000_100442144	3300009705	Marine	IMLPRFEAFLRPIILNMQNNEITLINSKKYFMVFI*
Ga0115002_103267812	3300009706	Marine	LIIFFDLNSGPTDFPSILPTLDAFLKPIILKMKNNEIMLINSKKYLIIFI*
Ga0115002_103296142	3300009706	Marine	LIIFFDLNNGPISLPKALPRFDAFFKPIILKIQNSEIMLTNSKKYLIIFI*
Ga0115002_104914001	3300009706	Marine	DPRFDAFLRPNILNMENKEIMIINSKKYLIIFIYIF*
Ga0114999_101740321	3300009786	Marine	DLPKMLPRLDAFLRPIILKIQNNEIMLINSKKYLTIFI*
Ga0114999_104712652	3300009786	Marine	LNKGPIDLTIILPRLDAFLRPIILNIQNKEITIINSKKYLIIFI*
Ga0114999_107050491	3300009786	Marine	FPIMLPSLDAFLRPTILKIQNKDITLTNSKKDLIVFI*
Ga0133547_102050181	3300010883	Marine	SGPIACPRTLPRLDAFLRPIILKIQNNEIMLINSKKYLMIFI*
Ga0133547_102871054	3300010883	Marine	PRLDAFFRPIILKIKNKEITLINSKKYLTTFIQFF*
Ga0133547_118428511	3300010883	Marine	IFFDLNNGPISLPKILPRLDAFLKPIILKIQNNEIIVINSKKYLIIFI*
Ga0163108_102731831	3300012950	Seawater	PSNFPKTLPRLEAFLKPIILNIQNNEIIIVNSKKYLINFI*
Ga0163111_107174641	3300012954	Surface Seawater	KKGPTSFPKTPPKLEAFLKPIILNIQKKEIIIVNSKKYLINFI*
Ga0163111_123102911	3300012954	Surface Seawater	NNGPTSFPKMLPRFDAFFNPIILKIQNNEIILINSKKYLIVFI*
Ga0171652_10498502	3300013110	Marine	LKKGPANFPKTLPRLEAFLRPIILNIQNKEIIIVNSKKYLKIFI*
Ga0171652_10979451	3300013110	Marine	GPIDFPITLPTFDAFLRPIILKIQNKEIIDINSKKYLIIFI*
Ga0171651_10046841	3300013115	Marine	FDLKRGPKIFPRKPPKFEAFLSPIILNMQNKEIMLINSKKYLIIFI*
Ga0211669_10420731	3300020254	Marine	INLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI
Ga0211709_101289451	3300020369	Marine	RGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI
Ga0211709_101859171	3300020369	Marine	THFPKILPTFDAFLKPNILKIQNNEIILINSKKYLTIFI
Ga0211656_101570571	3300020375	Marine	LPNMLPRFDAFLRPIILKIQNKEIMLINSKKYLIIFI
Ga0211623_103157552	3300020399	Marine	DAFFSPIILKMQNKEIITINSKKYFTIFINFFLLIL
Ga0211552_100961802	3300020412	Marine	DLKIGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI
Ga0211553_100347641	3300020415	Marine	PINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI
Ga0211603_102507251	3300020427	Marine	NNGPINLPNRPPKLEAFLIPIILKMQKREIMLTNSKKYLIIFI
Ga0211521_102236291	3300020428	Marine	IFPNPVFIFFFIIFFDLKRGPIKDPNTLPRFDAFLRPSILNKTNKEVIVMNSKKYLIIFI
Ga0211578_104500521	3300020444	Marine	IFFDLNNGPIDFPKMLPRLDAFLNPIILKIKNNEIMLINSKKYLIIFI
Ga0211564_103949982	3300020445	Marine	KTLPRLEAFLKPIILNIQNNEIIIVNSKKYLINFI
Ga0206684_11108932	3300021068	Seawater	IIFFDLNSGPTDFPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI
Ga0206678_101556713	3300021084	Seawater	TDFPRTLPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI
Ga0187833_106196911	3300022225	Seawater	CLDLNNGPINLPRMLPRFDAFFRPIILKIQNKEIIVTNSKKYLIIFI
Ga0187827_102583751	3300022227	Seawater	FDLNNGPINFPKMAPRFEAFFRPIILKMVNKEIILMNSKKYLIVFI
Ga0187827_103598752	3300022227	Seawater	SFDLNNGPINFPKMAPRFEAFFRPIILKMANKEIILMNSKKYLIVFI
Ga0208206_10423742	3300025235	Deep Ocean	PSMLPRFDAFLRPTILKMQNKEIMLINSKKYLIIFI
Ga0208747_10017261	3300026074	Marine	LIFCLIIFFDLKRGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI
Ga0207990_11139201	3300026262	Marine	FDLKRGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI
Ga0209035_106484831	3300027827	Marine	NLPSMPPRFDAFFRPIILKILNKEITLMNSKKYLKIFI
Ga0209501_104175672	3300027844	Marine	PKIDPRFDAFLRPNILNMENKEIMIINSKKYLIIFIYIF
Ga0209402_102789631	3300027847	Marine	DLKKGPISFPKIDPRFDAFLRPNILNMENKEIMIINSKKYLMIFIYIF
Ga0257109_10623493	3300028487	Marine	GPTDFPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI
Ga0257112_101093491	3300028489	Marine	NSGPIILPIMLPREDAFLRPIILKIQNKEIMLINSKKYLIIFI
Ga0257111_10089201	3300028535	Marine	RTLPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI
Ga0257111_11134962	3300028535	Marine	SLDLNSGPKSFPIDPPKFEAFFRPIILKIQKKEITVINSKKYLKIFI
Ga0257111_11788971	3300028535	Marine	GPINFPKILPVFDAFLKPIILKIQNNEMMLINSKKYLKIFI
Ga0257111_12187711	3300028535	Marine	GPITFPRMLPRLDAFFSPIILKMQNKEIITINSKKYFTIFIYLFLLIL
Ga0310122_101399263	3300031800	Marine	NLPNTLPRFDAFLRPIILKMQNKEIILVNSKKYLIIFI
Ga0310121_100594684	3300031801	Marine	LPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI
Ga0310123_104449871	3300031802	Marine	ILFSYFFDLKRGPINLPSTLPRFDAFLRPIILNMQNKEIMLTNSKKYLIIFI
Ga0310123_104477151	3300031802	Marine	PINLPRILPRFDAFFRPTILKIENKEIILINSKKYLIIFI
Ga0310123_109348132	3300031802	Marine	SVLPRLDAFLRPIILKIQNKEITLMNSKKYLIIFI
Ga0310123_109404212	3300031802	Marine	KILPRLDAFLSPIILKIQNKEIMLMNSKKYLIIFI
Ga0310120_101516103	3300031803	Marine	LNNGPINFPKILPVFDAFLKPIILKIQNNEMMLINSKKYLKIFI
Ga0310120_105832771	3300031803	Marine	CLIIFFDLKKGPITFPRMLPRLDAFLSPIILKMQNKEIIIINSKKYFIIFINFFLLIL
Ga0315319_102313201	3300031861	Seawater	RGPISLPSILPRFDAFLRPTILKMQNKEIMLINSKKYLIIFI
Ga0315319_103597742	3300031861	Seawater	PKNLPSILPRFDAFFKPIILKIQKKEIILMNSKKYLKIFI
Ga0310344_101252841	3300032006	Seawater	PKILPRLDAFLSPIILKIEKSEIILINSKKYLNNFI
Ga0315316_100573961	3300032011	Seawater	GPINLPSKLPRLDAFLRPIILKIQNKEIMLINSKKYLIIFIQFFLFHQ
Ga0315316_101371961	3300032011	Seawater	LIIFFDLNNGPIYTPRMLPRFDAFLNPIILKIQNNEIMIINSKKYLIIFI
Ga0315329_104914712	3300032048	Seawater	FFDLKKGPITFPRMLPRLDAFFSPIILKMQNKEIITINSKKYFTIFINFFLLIL
Ga0310345_109632021	3300032278	Seawater	KGPINFPKTPPRLEAFLRPIILNIQNKEIIIVNSKKYLINFI
Ga0310345_123717101	3300032278	Seawater	PSIAPRLDAFLSPIILKMQNKEIMLINSKKYLIIFI
Ga0315334_113253641	3300032360	Seawater	GPINLPRILPRFDAFFRPIILKMQNKEIILMNSKKYLKIFI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073662

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences