Metagenome / Metatranscriptome Family F073817

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073817
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	49 residues
Representative Sequence	MSPIENVSRRRFLTGGIIAAGALVLGVRYYPKLSSGDKLPHDTNA
Number of Associated Samples	87
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.17 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (40.833 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.47% β-sheet: 0.00% Coil/Unstructured: 57.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13085	Fer2_3	45.00
PF01799	Fer2_2	28.33
PF14833	NAD_binding_11	17.50
PF10431	ClpB_D2-small	4.17
PF02687	FtsX	0.83
PF00557	Peptidase_M24	0.83
PF05199	GMC_oxred_C	0.83
PF04264	YceI	0.83
PF10518	TAT_signal	0.83
PF00005	ABC_tran	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.83
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
All Organisms	root	All Organisms	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
cellular organisms	root	All Organisms → cellular organisms	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Geobacter metallireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter metallireducens	0.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10032275	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300001593\|JGI12635J15846_10073437	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300001593\|JGI12635J15846_10678375	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300001593\|JGI12635J15846_10729828	Not Available	570	Open in IMG/M
3300001867\|JGI12627J18819_10068133	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300002245\|JGIcombinedJ26739_100618977	All Organisms → cellular organisms → Bacteria → Proteobacteria	960	Open in IMG/M
3300002910\|JGI25615J43890_1053894	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300002914\|JGI25617J43924_10133400	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300002914\|JGI25617J43924_10234690	Not Available	616	Open in IMG/M
3300005178\|Ga0066688_10853693	Not Available	565	Open in IMG/M
3300005187\|Ga0066675_10894548	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005445\|Ga0070708_101940881	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300005447\|Ga0066689_10686900	Not Available	641	Open in IMG/M
3300005557\|Ga0066704_10610940	Not Available	700	Open in IMG/M
3300005557\|Ga0066704_10672045	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005568\|Ga0066703_10773525	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300005586\|Ga0066691_10611536	Not Available	648	Open in IMG/M
3300006102\|Ga0075015_100550500	Not Available	670	Open in IMG/M
3300006176\|Ga0070765_100201252	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300006804\|Ga0079221_11455516	Not Available	548	Open in IMG/M
3300007258\|Ga0099793_10226156	Not Available	900	Open in IMG/M
3300009038\|Ga0099829_11047081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter metallireducens	676	Open in IMG/M
3300009143\|Ga0099792_11192099	Not Available	516	Open in IMG/M
3300010360\|Ga0126372_12575148	Not Available	560	Open in IMG/M
3300011270\|Ga0137391_10374018	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300011270\|Ga0137391_11524825	Not Available	513	Open in IMG/M
3300011271\|Ga0137393_10218409	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300011271\|Ga0137393_10462349	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300012096\|Ga0137389_10590423	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300012189\|Ga0137388_10310630	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300012189\|Ga0137388_10350557	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300012202\|Ga0137363_10012524	All Organisms → cellular organisms → Bacteria	5469	Open in IMG/M
3300012202\|Ga0137363_10339624	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300012202\|Ga0137363_10410263	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300012203\|Ga0137399_11335461	Not Available	602	Open in IMG/M
3300012205\|Ga0137362_10359700	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300012210\|Ga0137378_10843645	Not Available	829	Open in IMG/M
3300012210\|Ga0137378_10848877	Not Available	826	Open in IMG/M
3300012362\|Ga0137361_10025272	All Organisms → cellular organisms → Bacteria	4607	Open in IMG/M
3300012363\|Ga0137390_10175769	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300012918\|Ga0137396_10061502	All Organisms → cellular organisms → Bacteria	2604	Open in IMG/M
3300012922\|Ga0137394_11591258	Not Available	510	Open in IMG/M
3300012923\|Ga0137359_10507860	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300012923\|Ga0137359_10836134	Not Available	796	Open in IMG/M
3300012923\|Ga0137359_11093677	Not Available	682	Open in IMG/M
3300012924\|Ga0137413_10555424	Not Available	853	Open in IMG/M
3300012924\|Ga0137413_11797572	Not Available	506	Open in IMG/M
3300012927\|Ga0137416_11293260	Not Available	658	Open in IMG/M
3300012929\|Ga0137404_10818376	Not Available	846	Open in IMG/M
3300012984\|Ga0164309_10523775	All Organisms → cellular organisms → Bacteria → Proteobacteria	912	Open in IMG/M
3300015052\|Ga0137411_1001318	Not Available	937	Open in IMG/M
3300015054\|Ga0137420_1205286	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300015054\|Ga0137420_1288992	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300015054\|Ga0137420_1350431	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300015054\|Ga0137420_1362691	All Organisms → cellular organisms → Bacteria → Acidobacteria	2146	Open in IMG/M
3300015242\|Ga0137412_10137308	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300018006\|Ga0187804_10090653	Not Available	1246	Open in IMG/M
3300020140\|Ga0179590_1104752	Not Available	763	Open in IMG/M
3300020199\|Ga0179592_10012958	All Organisms → cellular organisms → Bacteria	3633	Open in IMG/M
3300020579\|Ga0210407_11061447	Not Available	615	Open in IMG/M
3300020581\|Ga0210399_10055078	All Organisms → cellular organisms → Bacteria → Acidobacteria	3199	Open in IMG/M
3300020581\|Ga0210399_10767790	Not Available	789	Open in IMG/M
3300020583\|Ga0210401_10160220	All Organisms → cellular organisms → Bacteria → Acidobacteria	2101	Open in IMG/M
3300020583\|Ga0210401_10776287	Not Available	818	Open in IMG/M
3300021046\|Ga0215015_10194998	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300021086\|Ga0179596_10229225	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300021088\|Ga0210404_10713376	Not Available	572	Open in IMG/M
3300021151\|Ga0179584_1445957	Not Available	565	Open in IMG/M
3300021170\|Ga0210400_10504577	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300021171\|Ga0210405_10927027	Not Available	660	Open in IMG/M
3300021401\|Ga0210393_10162771	All Organisms → cellular organisms → Bacteria → Acidobacteria	1796	Open in IMG/M
3300021432\|Ga0210384_10016493	All Organisms → cellular organisms → Bacteria	7243	Open in IMG/M
3300021432\|Ga0210384_10317921	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300021475\|Ga0210392_10441542	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300021479\|Ga0210410_11719014	Not Available	521	Open in IMG/M
3300021559\|Ga0210409_10284750	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300021559\|Ga0210409_10645815	Not Available	928	Open in IMG/M
3300021559\|Ga0210409_10743223	Not Available	853	Open in IMG/M
3300021559\|Ga0210409_11494960	Not Available	551	Open in IMG/M
3300022717\|Ga0242661_1040778	Not Available	836	Open in IMG/M
3300024249\|Ga0247676_1042332	Not Available	738	Open in IMG/M
3300024330\|Ga0137417_1039189	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300024330\|Ga0137417_1052938	Not Available	834	Open in IMG/M
3300024330\|Ga0137417_1110511	Not Available	868	Open in IMG/M
3300024330\|Ga0137417_1168014	Not Available	753	Open in IMG/M
3300025939\|Ga0207665_10032898	All Organisms → cellular organisms → Bacteria	3434	Open in IMG/M
3300026295\|Ga0209234_1298065	Not Available	518	Open in IMG/M
3300026304\|Ga0209240_1145857	Not Available	750	Open in IMG/M
3300026309\|Ga0209055_1040532	All Organisms → cellular organisms → Bacteria → Acidobacteria	2060	Open in IMG/M
3300026356\|Ga0257150_1032828	Not Available	749	Open in IMG/M
3300026359\|Ga0257163_1043150	Not Available	716	Open in IMG/M
3300026496\|Ga0257157_1095824	Not Available	518	Open in IMG/M
3300026551\|Ga0209648_10096015	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M
3300026557\|Ga0179587_10367086	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300026557\|Ga0179587_10728504	Not Available	653	Open in IMG/M
3300026557\|Ga0179587_11126663	Not Available	516	Open in IMG/M
3300027439\|Ga0209332_1078415	Not Available	598	Open in IMG/M
3300027629\|Ga0209422_1006145	All Organisms → cellular organisms → Bacteria → Acidobacteria	2954	Open in IMG/M
3300027645\|Ga0209117_1058896	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300027671\|Ga0209588_1152355	Not Available	732	Open in IMG/M
3300027681\|Ga0208991_1052627	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300027846\|Ga0209180_10544277	Not Available	647	Open in IMG/M
3300027846\|Ga0209180_10553229	Not Available	640	Open in IMG/M
3300028047\|Ga0209526_10285202	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300028536\|Ga0137415_11238924	Not Available	562	Open in IMG/M
3300029636\|Ga0222749_10365272	Not Available	759	Open in IMG/M
3300029636\|Ga0222749_10715199	Not Available	548	Open in IMG/M
3300030730\|Ga0307482_1013114	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300030730\|Ga0307482_1198570	Not Available	608	Open in IMG/M
3300030991\|Ga0073994_12293702	Not Available	615	Open in IMG/M
3300031231\|Ga0170824_112564542	Not Available	691	Open in IMG/M
3300031718\|Ga0307474_11387009	Not Available	554	Open in IMG/M
3300031753\|Ga0307477_11111687	Not Available	515	Open in IMG/M
3300031754\|Ga0307475_10014287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5400	Open in IMG/M
3300031754\|Ga0307475_10525600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300031754\|Ga0307475_11016502	Not Available	651	Open in IMG/M
3300031754\|Ga0307475_11086413	Not Available	626	Open in IMG/M
3300031768\|Ga0318509_10369293	Not Available	803	Open in IMG/M
3300031823\|Ga0307478_10414687	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300032180\|Ga0307471_102339753	Not Available	674	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.33%
Aquatic	Environmental → Aquatic	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.33%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.67%
Loam	Environmental → Terrestrial → Soil → Loam	11.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	40.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100322751	3300001545	Forest Soil	MSAIENVSRRRFLMGGIVAAGALVLGVRYYPRLSSGDR
JGI12635J15846_100734375	3300001593	Forest Soil	MSAIENVSRRRFLAEGIIAAGALVLGVRHYSKFSSGDKLPHDTNADH
JGI12635J15846_106783751	3300001593	Forest Soil	MSEIENVSRRRFLTGGVIAAGALVLGVGYHRKLLAGEKLSYATNAD
JGI12635J15846_107298281	3300001593	Forest Soil	MSEIENVSRRRFLAGGVVAAGALVLGVRYHKLLAGEK
JGI12627J18819_100681331	3300001867	Forest Soil	MNGIENVSRRRFLTGGIVAVGALVLGVRYYPRPSAGDELPHDTN
JGIcombinedJ26739_1006189771	3300002245	Forest Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRYYSKLSSGDKLPHDTNADRATLHPNAFLGIDADGTVWIVASRSE
JGI25615J43890_10538942	3300002910	Grasslands Soil	MSTIENVSRRRFLAGGIIAAGALVLGVRYYSKLSSGDKLPH
JGI25617J43924_101334001	3300002914	Grasslands Soil	MSTIENVSRRRFLTGGIIATGALVLGVRYYPKLLSGQKLPHDT
JGI25617J43924_102346902	3300002914	Grasslands Soil	MSAIENLSRRRFLTRGIIAAGALVLGVRYYHKLSSGDKLPHDTNADHATLHPSVYLGID
Ga0066688_108536931	3300005178	Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRFRSKLSGDHLPHNTNADHAKLRP
Ga0066675_108945481	3300005187	Soil	MSEIENVSRRRFLTRGIIAAGALVLGVRYYHKLSSGDKLPHDT
Ga0070708_1019408811	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSTIANVSRRRFLTGGVIAAGALVLGVGYYRKLLPGQKLPEETNADHATLHPSVYLGINP
Ga0066689_106869001	3300005447	Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRYYSGISSGDKLPHDTNADHATL
Ga0066704_106109401	3300005557	Soil	MSTIENVSRRRFLTGGIIAAGALVLGVRYYEKLSTGDNLPHDTNAD
Ga0066704_106720451	3300005557	Soil	MSTIENVSRRRFLAGGVIAAGALVLGVRYYHKLSSG
Ga0066703_107735252	3300005568	Soil	MSTIANVSRRRFLTGGVIAAGALVLGVGYYRKLLPGQKLPEETNTDHATLHP
Ga0066691_106115362	3300005586	Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRFRSKFSGDHLPH
Ga0075015_1005505002	3300006102	Watersheds	MSVIENVSRRRFLTGGIVAAGALVLGVRYYPKLAAGDKVPHDTNADRAT
Ga0070765_1002012521	3300006176	Soil	MSVIENVSRRRFLTGGVIAASALVLGVHYYPKRSAGDKLPHDTNADHA
Ga0079221_114555161	3300006804	Agricultural Soil	MSEIENVSRRRFLTGGIIAAGALVLGVRYCPKLSS
Ga0099793_102261561	3300007258	Vadose Zone Soil	MSPIENVSRRRFLTGGIIAAGALVLGVRYYHKLSSGDKLPHDTNADHAA
Ga0099829_110470811	3300009038	Vadose Zone Soil	MSAIENVSRRSFLTGGIVAAGALVLGVRYYPKLLPGDKLPQDTNADHATLHPSDYLGINPDGTVWIVAARSEM
Ga0099792_111920992	3300009143	Vadose Zone Soil	MNTIANVSRRRFIAGGVIATGALVLGVHYYPRLSASDKLPH
Ga0126372_125751481	3300010360	Tropical Forest Soil	MNTIQNVSRRRFLTGSIVAAGGLVLGVHYHRKFSGGDKLPHDLQ
Ga0137391_103740181	3300011270	Vadose Zone Soil	MNTIANVSRRRFIAGGVIATGALVLGVHYYPRLSASDKLPHDTNADHATLH
Ga0137391_115248251	3300011270	Vadose Zone Soil	MSEIENVSRRRFLTGGMIAAGALVLGVRYYGKLSWGDQLPHDTNADHATLHPSVYLGI
Ga0137393_102184093	3300011271	Vadose Zone Soil	MSTIENVSRRRFLAGGIIAAGALVLGVRYYSKLSSGDKL
Ga0137393_104623493	3300011271	Vadose Zone Soil	MSTIENVSRRRFLTGGIIAAGALVLGVKYYPKLSLGDKLPHDTNADH
Ga0137389_105904233	3300012096	Vadose Zone Soil	MSPIENVSRRRFLTGGIIAAGALVLGVRYYSRISSGDKLP
Ga0137388_103106303	3300012189	Vadose Zone Soil	MNGSENVSRRRFLTGGIITAGAVVLGVRYYPKLSSGDKLPHHTNADHA
Ga0137388_103505571	3300012189	Vadose Zone Soil	MSTIENVSRRRFLTGGIIAAGALVLGVRYYHKLSSGNKLPHDTTADHATLHPSVFL
Ga0137363_100125241	3300012202	Vadose Zone Soil	MSQIENVSRRRFLTGGIIAAGALVLGVRYDHKLSSGDKLPNDTKAD
Ga0137363_103396241	3300012202	Vadose Zone Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGATSPRNTNADHAKLNPSV
Ga0137363_104102634	3300012202	Vadose Zone Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRYYSKLSSGDKLPHDT
Ga0137399_113354612	3300012203	Vadose Zone Soil	MSSIGNVSRRRFLTGGVIAAGALVLGVRYYRKLSSGDKLPHDTNAD
Ga0137362_103597003	3300012205	Vadose Zone Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRYCSRISSGDKLPHDTNADHATLHP
Ga0137378_108436453	3300012210	Vadose Zone Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRYYSRISSGDKLPHDTNADHA
Ga0137378_108488771	3300012210	Vadose Zone Soil	MSPIENVSRRRFLTGGIIAAGALVLGVRYYSRISSGDKLPHDTNADHA
Ga0137361_100252726	3300012362	Vadose Zone Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRYYSKLSSGDKLPHDTNADRATLHPNAFLGIDADGTVWIVASRS
Ga0137390_101757693	3300012363	Vadose Zone Soil	MSQIENVSRRRFLTGGIIAGGALVLGVRYYHKLSPGDRLPHDTK
Ga0137396_100615021	3300012918	Vadose Zone Soil	MSTIENVSRRRFLTGGIIAAGALVLGVRYYSKLSLADKLPHDTNADHATLHPSAYL
Ga0137394_115912581	3300012922	Vadose Zone Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGAT
Ga0137359_105078603	3300012923	Vadose Zone Soil	MNTIANVSRRRFIAGGVIATGALVLGVHYYPRLSASDKLPHDTNADHATLRPTVYLGI
Ga0137359_108361343	3300012923	Vadose Zone Soil	MSMIEDVSRRKFLTTGIVAAGVLVLGVRYYPELTSGKTLPHDTNADRA
Ga0137359_110936771	3300012923	Vadose Zone Soil	MSTIENVSRRRFLTGGIIAAGALVLGVRYYSKLSLGDKLPHDTNADHAT
Ga0137413_105554241	3300012924	Vadose Zone Soil	MNTIANVSRRRFIAGGVIATGALVLGVRYYPRLSDSDKLPHDTNADHAT
Ga0137413_117975722	3300012924	Vadose Zone Soil	MNTIANLSRRRFIAGGVIATGALVLGVHYYPRLSASGQLPHDTNADHATLHPSVYLGINP
Ga0137416_112932601	3300012927	Vadose Zone Soil	MSAIENVSRRRFLTGGIIAAGALVLGVKYYPKLSLGDKLPHDTNADRAT
Ga0137404_108183761	3300012929	Vadose Zone Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGATT
Ga0164309_105237751	3300012984	Soil	MSPVANVSRRGFLAGGAIAAGALVLGVHYYPKLSSGDKLPHDTNADHAA
Ga0137411_10013181	3300015052	Vadose Zone Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGATTPRSTNADHAKLNPSVFLGI*
Ga0137420_12052861	3300015054	Vadose Zone Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRYYSKLSSGDKLPHDTNTDHATLHPNIF
Ga0137420_12889924	3300015054	Vadose Zone Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGATTPRSTNADHAKLNPSVF
Ga0137420_13504311	3300015054	Vadose Zone Soil	MIPIENVSRRRFLTGGIIAAGALVLGMRYYPKLSSGDKLPHDTNADQYKRGSRHL
Ga0137420_13626911	3300015054	Vadose Zone Soil	MSTIENVSRRRFLTGGIIAAGALVLGVKYYPKLSLGDKLLPH
Ga0137412_101373081	3300015242	Vadose Zone Soil	MNTIANVSRRGFIAGGVIATGALVLGVHYYPRLSASGQLPHDTNADHATLHPSVYLGINP
Ga0187804_100906533	3300018006	Freshwater Sediment	MNTIENVSRRTFLRGSVIAAGAFVLGVRFYPDLAFGDTLPHDTNADRATLHPSIFLGIN
Ga0179590_11047521	3300020140	Vadose Zone Soil	MSAIANVSRRRFIAGGVIATGALVLGVHYYPRLSSGDKLPHDSNADHAT
Ga0179592_100129581	3300020199	Vadose Zone Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRYYSKLSSGDKLPHDTNADRATLHPNAFLGIDADGTVWIVASRSEIH
Ga0210407_110614472	3300020579	Soil	VNEIENISRRRFLTGGIVSAGALVLGVRYFPKIAAGDVLPHDTNADHATLH
Ga0210399_100550784	3300020581	Soil	MKGIENVSRRRFLTAGIVAAGALVLGVRYYPKRWLGDKLPKDTSADHATLHPSVYL
Ga0210399_107677902	3300020581	Soil	MSGIENVSRRRFLTGGIVAAGALVLGVRYYPKLAAGGKVPHDTNADRA
Ga0210401_101602201	3300020583	Soil	MSSIENVSRRRFLTGGVIAAGALVLGVRYYHKLSS
Ga0210401_107762873	3300020583	Soil	MSAIENVSRRRLLRGGIIAAGALVLGVRYYPKLSSGDKLSHEPNADHAILHPGVYLG
Ga0215015_101949981	3300021046	Soil	MSTVENVSRRRFLTGGIIAAGALVLGVRYYSKLSSGDKLPHDTNADHATLHPSVSVSYTHLRAHD
Ga0179596_102292253	3300021086	Vadose Zone Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGA
Ga0210404_107133762	3300021088	Soil	MSTIENVSRRSFLRGSVIAAGALVLGMRFYPGLAFGDTLPHDTNA
Ga0179584_14459572	3300021151	Vadose Zone Soil	MSQVENVSRRRFLTGGIIAAGALVLGVRYYDKLSPGDKLPHDTNADHATLHPS
Ga0210400_105045773	3300021170	Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRHYSKFSSG
Ga0210405_109270272	3300021171	Soil	MRPVENVSRRNFLRGGVFAAGAFVLGVRFYPSLLSADALPRDTHVDLATFHPSIFVG
Ga0210393_101627711	3300021401	Soil	MNEIANASRRRFLTGGVIAAGALVLGLRYSPKLLHGDK
Ga0210384_1001649311	3300021432	Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRYYRKLLPG
Ga0210384_103179213	3300021432	Soil	MSTVENVSRRRFLTGGIIAAGALVLGVRYYSKLSPGAKLPHNTNADHATLHPNVYLGID
Ga0210392_104415423	3300021475	Soil	MSGIENVSRRRFLTGGIVAAGALVLGVRYYPKLAAGGKV
Ga0210410_117190142	3300021479	Soil	MSSIENVSRRRFLTGGIIAAGALVLGVRYYSKLSPG
Ga0210409_102847501	3300021559	Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRHYSKFSY
Ga0210409_106458151	3300021559	Soil	MSEVVNVSRRRFVTGGIIAAGALVLGVRYYSRLSP
Ga0210409_107432231	3300021559	Soil	MNAIENVSRRRFLTGGIIAAGALVLGVRYYPKLSSSDKLPHDTNADHATL
Ga0210409_114949602	3300021559	Soil	MSVIENVSRRRFLTGGVIAASALVLGVHYYPKRSAGDKLPHDTNADHATLHPSVYLGIDP
Ga0242661_10407781	3300022717	Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRYYRKLLPGDKLPHDTNADHATLH
Ga0247676_10423321	3300024249	Soil	MRGIENVSRRRFLAGGMVAAGALILGVRYYPVLAADDELPHDTKADNATLHP
Ga0137417_10391891	3300024330	Vadose Zone Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGATTPRSTNADHAKLNPSVFLGIDPDAQTAPCG
Ga0137417_10529383	3300024330	Vadose Zone Soil	MSPIENVSRRRFLTGGIIAAGALVLGVRYYHKLPSGDKLPHD
Ga0137417_11105111	3300024330	Vadose Zone Soil	MSPIENVSRRRFLTGGIIAAGALVLGVRYYHKLPSGDKLPHDTNADHAPPYIP
Ga0137417_11680142	3300024330	Vadose Zone Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGATSPRN
Ga0207665_100328984	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSTILNVSRRRFLTGGVIAAGALVLGVGCYRKSLTGQKLPEETNADHATLHPSVYLGIN
Ga0209234_12980651	3300026295	Grasslands Soil	MSPIENVSRRRFLTGGIIAAGALVLGVHYYHRLPSGDKLPRDR
Ga0209240_11458571	3300026304	Grasslands Soil	MSTIENVSRRRFLTGGIIAAGALVLGVKYYPKLSLGDKLPHDTNADRATLHP
Ga0209055_10405324	3300026309	Soil	MSEIENVSRRRFLTRGIIAAGALVLGVRYYHKLSSGDKRPHDTNADHATLPPSVY
Ga0257150_10328282	3300026356	Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRYYSKLSSGDKLPHDTNADHATLHPNV
Ga0257163_10431503	3300026359	Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRYYAKFSSG
Ga0257157_10958241	3300026496	Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGATSPRNTNADHAKLNPSVFL
Ga0209648_100960151	3300026551	Grasslands Soil	MSTIENVSRRRFLTGGIIAAGALVLGVRYYHKLSSGDKLPHDTN
Ga0179587_103670861	3300026557	Vadose Zone Soil	MNTIANLSRRRFIAGGVIATGALVLGVHYYPRLSASDQLPHDTNA
Ga0179587_107285041	3300026557	Vadose Zone Soil	MSPIENVSRRRFLTGGIIAAGALVLGVRYYPKSSSGGKLPHDT
Ga0179587_111266632	3300026557	Vadose Zone Soil	MSPIENVSRRRFLTGGIIAAGALVLGVRYYSRPSSGDKLPHDTNTDHATLRPSVYLGIN
Ga0209332_10784151	3300027439	Forest Soil	MSSIENVSRRKFLVGGVVVGSALVLGVRFYPKLLSGATLPHN
Ga0209422_10061451	3300027629	Forest Soil	MSEIENVSRRRFLTGGVIAAGALVLGVGYHRKLLAGEKLSYATNADHAALHPSVYLGID
Ga0209117_10588963	3300027645	Forest Soil	MSSIENVSRRKFLTGGVVVAGALVLGVRYYPKLLSGATFPRNTNADHAKL
Ga0209588_11523552	3300027671	Vadose Zone Soil	MSTVENVSRRRFLTGGIIAAGALVLGVRYYSKLSSGDKLPHDTNADHATLHPSVY
Ga0208991_10526271	3300027681	Forest Soil	MSTIENVSRRKFLTGGVVVAGALVLGVRYYPKLLS
Ga0209180_105442772	3300027846	Vadose Zone Soil	MSTIENVSRRRFLTGGIIAAGALVLGVRYYHKLSSGDKLPHDTNADHATLHPSVYLG
Ga0209180_105532291	3300027846	Vadose Zone Soil	MSPIENVSRRRFLTGGIIAAGALVLGVRYYPKLSSGDKLPHDTNA
Ga0209526_102852021	3300028047	Forest Soil	MSPIENVSRRRFLTGGIVAAGALVLGVRYYPKLSLGAQLPHDTNADHA
Ga0137415_112389241	3300028536	Vadose Zone Soil	MSAIENVSRRRFLTGGIIAAGALVLGVRFRSKLSGDHLPHNTNADHAKLRPNLYLGIDPD
Ga0222749_103652721	3300029636	Soil	MSTIENVSRRSFLRGGVIAAGALVLGVRFYPGLAFGDTLPHDTNADHATLHP
Ga0222749_107151991	3300029636	Soil	MNGIENVSRRRFLTGGIVAAGALVLGVRYYHKLAVGAELPHDTNADHATLHPS
Ga0307482_10131143	3300030730	Hardwood Forest Soil	MSPVENVSRRRFLTGGIIAAGALVLGVRYYDKLSLDGRLPHDTNAD
Ga0307482_11985701	3300030730	Hardwood Forest Soil	MSEIENVSRRRFLAGSVIAAGALVLGVRYYPKLSSGDELPRDTNADHA
Ga0073994_122937021	3300030991	Soil	MSEIENVSRRRFLTGGVIAAGALVLGVRYYGKLLPGDKLPHDTNA
Ga0170824_1125645422	3300031231	Forest Soil	MNTIANGSRRRFIAGGVIATGALVLGVHYYPRLSSGDKLPHDTNADHAALHPGVYLGINP
Ga0307474_113870091	3300031718	Hardwood Forest Soil	MSAIENVSRRRFLTGGVIAAGALVLGVRYYPMLSARDKLPHDT
Ga0307477_111116871	3300031753	Hardwood Forest Soil	MTAIENASRRKFLTGGVIAAGALVLGVRYYPKLLSGATLPHDTNSDRARLHPSVY
Ga0307475_100142876	3300031754	Hardwood Forest Soil	MSRIENVSRRRFLTGGIIAAGALVLGVRYYHKLSSGDRLPHDTKADHATLHPSV
Ga0307475_105256003	3300031754	Hardwood Forest Soil	MSAIENVSRRRFLAGGIIAAGALVLGVRYYSNLSPGDRL
Ga0307475_110165022	3300031754	Hardwood Forest Soil	MSTVENVSRRRFLTGGVIAAGALVLGVRFYSKLSPGDRLPHDTNADHATLHPSV
Ga0307475_110864132	3300031754	Hardwood Forest Soil	MNEIENVSRRRFLTGGIVAAGALVLGVRYYPRLSAGDELPHDTNADHAT
Ga0318509_103692932	3300031768	Soil	MSTVENVSRRRFLAGGVIAVGGLALGVRYFRSRRESNDLPHDTHADHATLHPSVYVGIDPDGTVWI
Ga0307478_104146873	3300031823	Hardwood Forest Soil	MSTIENVSRRSFLRGGVIAAGALVLGVRFYPGLAFGDTLPHDTNA
Ga0307471_1023397531	3300032180	Hardwood Forest Soil	MSAIENVSRRRFLTGGIIAAGGLVLGVRYYPKLSSDQKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073817

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences