Metagenome / Metatranscriptome Family F073893

Basic Information
Family ID	F073893
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	62 residues
Representative Sequence	FGAPMQMDPPENPDDPLENHDHGQCRAFTDRLMREIARLSEREYVDEYVPSRPSAAAA
Number of Associated Samples	103
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.33 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Bacteria (59.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.167 % of family members)
Environment Ontology (ENVO)	Unclassified (24.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.167 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.93% β-sheet: 0.00% Coil/Unstructured: 79.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01842	ACT	20.00
PF02547	Queuosine_synth	5.00
PF02782	FGGY_C	3.33
PF12802	MarR_2	2.50
PF13439	Glyco_transf_4	1.67
PF08471	Ribonuc_red_2_N	0.83
PF08450	SGL	0.83
PF13412	HTH_24	0.83
PF01022	HTH_5	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0809	S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)	Translation, ribosomal structure and biogenesis [J]	5.00
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.83
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.83
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.17 %
Unclassified	root	N/A	40.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.17 %
Unclassified	root	N/A	40.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.17 %
Unclassified	root	N/A	40.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.83 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	4.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.83 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	4.17 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.83 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.50 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	1.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.83 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.50 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101077993	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300004082\|Ga0062384_100219996	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300004082\|Ga0062384_100772210	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300004092\|Ga0062389_102284005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300004152\|Ga0062386_101454389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	571	Open in IMG/M
3300005524\|Ga0070737_10352670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300005602\|Ga0070762_11097379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	548	Open in IMG/M
3300006174\|Ga0075014_100057902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1688	Open in IMG/M
3300006176\|Ga0070765_102162093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300006893\|Ga0073928_10421659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300006893\|Ga0073928_10583354	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300009520\|Ga0116214_1038194	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300009522\|Ga0116218_1161195	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300009525\|Ga0116220_10262742	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300009640\|Ga0116126_1278735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300009764\|Ga0116134_1284766	Not Available	569	Open in IMG/M
3300010049\|Ga0123356_10665175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1209	Open in IMG/M
3300010361\|Ga0126378_12586001	Not Available	580	Open in IMG/M
3300010379\|Ga0136449_102109601	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300010880\|Ga0126350_12016877	Not Available	539	Open in IMG/M
3300014200\|Ga0181526_10757057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300014493\|Ga0182016_10115844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1865	Open in IMG/M
3300014499\|Ga0182012_10525703	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300014499\|Ga0182012_10959193	Not Available	538	Open in IMG/M
3300014838\|Ga0182030_10570702	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300017973\|Ga0187780_10055241	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300017975\|Ga0187782_10048102	All Organisms → cellular organisms → Bacteria	3106	Open in IMG/M
3300017975\|Ga0187782_10522275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300018026\|Ga0187857_10147675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1119	Open in IMG/M
3300018030\|Ga0187869_10465459	Not Available	601	Open in IMG/M
3300018034\|Ga0187863_10157668	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300018047\|Ga0187859_10321976	Not Available	839	Open in IMG/M
3300018057\|Ga0187858_10466237	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300018058\|Ga0187766_10591772	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300018062\|Ga0187784_11562624	Not Available	522	Open in IMG/M
3300018088\|Ga0187771_10839006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	779	Open in IMG/M
3300018090\|Ga0187770_10057653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2814	Open in IMG/M
3300020582\|Ga0210395_10538566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300021403\|Ga0210397_11223132	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300021406\|Ga0210386_11506584	Not Available	561	Open in IMG/M
3300021407\|Ga0210383_11389094	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300021432\|Ga0210384_11441984	Not Available	594	Open in IMG/M
3300021433\|Ga0210391_10995435	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300021478\|Ga0210402_11340408	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300021479\|Ga0210410_11275690	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300021479\|Ga0210410_11762167	Not Available	513	Open in IMG/M
3300022557\|Ga0212123_10573179	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300025703\|Ga0208357_1088027	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300026921\|Ga0207860_1032993	Not Available	583	Open in IMG/M
3300027039\|Ga0207855_1062995	Not Available	501	Open in IMG/M
3300027574\|Ga0208982_1099551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300027803\|Ga0209910_10005917	Not Available	823	Open in IMG/M
3300027855\|Ga0209693_10269265	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300027889\|Ga0209380_10675086	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027895\|Ga0209624_10735841	Not Available	650	Open in IMG/M
3300027908\|Ga0209006_11162746	Not Available	605	Open in IMG/M
3300027908\|Ga0209006_11334493	Not Available	552	Open in IMG/M
3300027968\|Ga0209061_1219367	Not Available	574	Open in IMG/M
3300028783\|Ga0302279_10056548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2325	Open in IMG/M
3300028806\|Ga0302221_10458603	Not Available	556	Open in IMG/M
3300028808\|Ga0302228_10558873	Not Available	503	Open in IMG/M
3300028813\|Ga0302157_10332599	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300028877\|Ga0302235_10026047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3081	Open in IMG/M
3300028877\|Ga0302235_10037500	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300028882\|Ga0302154_10427275	Not Available	636	Open in IMG/M
3300029636\|Ga0222749_10370220	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300029882\|Ga0311368_10787189	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300029883\|Ga0311327_10766298	Not Available	565	Open in IMG/M
3300029943\|Ga0311340_11428020	Not Available	545	Open in IMG/M
3300029951\|Ga0311371_11123418	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300029953\|Ga0311343_11105997	Not Available	613	Open in IMG/M
3300029955\|Ga0311342_10053509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	4630	Open in IMG/M
3300029999\|Ga0311339_10676481	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300030007\|Ga0311338_11960086	Not Available	522	Open in IMG/M
3300030013\|Ga0302178_10178140	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300030020\|Ga0311344_11344115	Not Available	528	Open in IMG/M
3300030503\|Ga0311370_10934653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300030503\|Ga0311370_12432823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300030520\|Ga0311372_10590120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1592	Open in IMG/M
3300030524\|Ga0311357_10136329	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300030617\|Ga0311356_10370730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1419	Open in IMG/M
3300030618\|Ga0311354_11571306	Not Available	579	Open in IMG/M
3300031057\|Ga0170834_109099889	Not Available	516	Open in IMG/M
3300031090\|Ga0265760_10105163	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300031234\|Ga0302325_13266319	Not Available	516	Open in IMG/M
3300031236\|Ga0302324_103063544	Not Available	554	Open in IMG/M
3300031236\|Ga0302324_103528216	Not Available	507	Open in IMG/M
3300031236\|Ga0302324_103565197	Not Available	503	Open in IMG/M
3300031259\|Ga0302187_10569838	Not Available	509	Open in IMG/M
3300031525\|Ga0302326_11146068	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300031572\|Ga0318515_10539457	Not Available	622	Open in IMG/M
3300031640\|Ga0318555_10129461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1345	Open in IMG/M
3300031671\|Ga0307372_10356989	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300031708\|Ga0310686_102281892	Not Available	618	Open in IMG/M
3300031708\|Ga0310686_103765494	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300031708\|Ga0310686_109865778	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031708\|Ga0310686_117722446	Not Available	506	Open in IMG/M
3300031723\|Ga0318493_10344114	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300031744\|Ga0306918_10769797	Not Available	752	Open in IMG/M
3300031744\|Ga0306918_11343913	Not Available	549	Open in IMG/M
3300031771\|Ga0318546_11307635	Not Available	509	Open in IMG/M
3300031781\|Ga0318547_10830494	Not Available	576	Open in IMG/M
3300031819\|Ga0318568_10105967	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300031859\|Ga0318527_10162146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300031890\|Ga0306925_11525752	Not Available	653	Open in IMG/M
3300031910\|Ga0306923_11628483	Not Available	670	Open in IMG/M
3300031959\|Ga0318530_10285377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300031959\|Ga0318530_10475641	Not Available	519	Open in IMG/M
3300032001\|Ga0306922_11706525	Not Available	623	Open in IMG/M
3300032008\|Ga0318562_10212947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300032064\|Ga0318510_10516865	Not Available	518	Open in IMG/M
3300032076\|Ga0306924_12369101	Not Available	536	Open in IMG/M
3300032094\|Ga0318540_10284038	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300032094\|Ga0318540_10474875	Not Available	604	Open in IMG/M
3300032160\|Ga0311301_11615199	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300032261\|Ga0306920_101378693	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300032898\|Ga0335072_11205641	Not Available	672	Open in IMG/M
3300034124\|Ga0370483_0149793	Not Available	784	Open in IMG/M
3300034199\|Ga0370514_053861	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300034199\|Ga0370514_120981	Not Available	671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.83%
Aquatic	Environmental → Aquatic	13.33%
Arthropoda	Host-Associated → Arthropoda	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.67%
Peat	Environmental → Terrestrial → Peat	24.17%
Freshwater	Environmental → Aquatic → Freshwater	10.00%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.50%
Sediment	Environmental → Aquatic → Sediment	0.83%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	24.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Clay	Environmental → Terrestrial → Soil → Clay	0.83%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	24.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.17%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.83%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	17.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.33%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.33%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.50%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.83%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1010779933	3300002245	Forest Soil	PENPDEPLANHDHTQCRDFTDRLMHEIAALSERPYVDEYVPSRAGVAPA*
Ga0062384_1002199961	3300004082	Bog Forest Soil	PVNSKMLRPFKTVTIRFGPPMQMAGPVNPDDPMEDHDHTQCRAFTDALMHEIARLAEREYVDEYVPSRATAAST*
Ga0062384_1007722101	3300004082	Bog Forest Soil	VNANFMRPFKTVVIRFGKPMRMDPPENPADPLANHDHTECRSFTDRLMHEIAALSERPYVDEYVPGRAGVAPA*
Ga0062389_1022840051	3300004092	Bog Forest Soil	IRFGAPMRMDPPEDPAHPLEHHDHTQCRDFTDQLMHEIARLSERDYVDEYVPSRTRAEAA
Ga0062386_1014543891	3300004152	Bog Forest Soil	KWMRPFKTVIIRFGAPMQMDPPENPDDPLENHDHTQCRAFTDRLMHEIARLSEREYVDWYVPARTKAAA*
Ga0070737_103526701	3300005524	Surface Soil	PPMRMDPPSDVNDPMADHDHTQCRAFTDELMREIARLSEREYLDEYVPSRTARTAA*
Ga0070762_110973791	3300005602	Soil	PFKTVTIRFGAPMQMEPPENPDDPLANHDHTQCRDFTDRLMREIARLSEREYIDEYVPSRKKAAA*
Ga0075014_1000579021	3300006174	Watersheds	FGEPMQMDPPENPDDPLENHDHTLCRAFTDSLMHQIARLSERQYVDEYVPTRTSAAAA*
Ga0070765_1021620931	3300006176	Soil	AADPSDPLADHDHDLCRAFTDRLMHEISRLSGRPYCDEYVPSRAPAT*
Ga0073928_104216591	3300006893	Iron-Sulfur Acid Spring	MQMDPPENPDDPLENHDHTQCRSFTDELMREIARLSDREYVDEYVPSRSARQAA*
Ga0073928_105833541	3300006893	Iron-Sulfur Acid Spring	VTIRFGAPMQMDPPENPDDPLANHDHTQCRDFTNQLMREIARLSEREYIDEYVPARTSAA
Ga0116214_10381944	3300009520	Peatlands Soil	APMQMDPPENPEDPLENHDHGQCRAFTDRLMREIARLSEREYVDEYVPSRPSAAAA*
Ga0116218_11611953	3300009522	Peatlands Soil	VNSNFMRPFKTVIVRFGAPMQMDPPENPDDPLENHDHGQCRAFTDRLMREIARLSEREYVDEYVPSRPSAAAA*
Ga0116220_102627423	3300009525	Peatlands Soil	FGAPMQMDPPENPDDPLENHDHGQCRAFTDRLMREIARLSEREYVDEYVPSRPSAAAA*
Ga0116126_12787352	3300009640	Peatland	DVQPVNSKFMRPFKKVTIRFGQPMEMDPPVNPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYIDEYVPSRAAAQSA*
Ga0116134_12847661	3300009764	Peatland	PMQMDPPENPEDPLANHDHTQCRAFTDRLMHEISRLSEREYVDEYVPARTKAAA*
Ga0123356_106651751	3300010049	Termite Gut	PMQMDPPDDPAHPLVNHDHTQCRTFTDKLMHEIARLSGREYVDEYVPSRSAAA*
Ga0126378_125860012	3300010361	Tropical Forest Soil	NSNMMRPFKTVTIRFGPPMQMDPPEDPAHPLENHDHTQCRDFTDRLMHEIARLSEREYIDEYVPPRAPAAAA*
Ga0136449_1021096011	3300010379	Peatlands Soil	VNSKILRPFIHVTIRFGRPMNMATPVNPDDPMEGHDHTECRTFTDSLMREIARLSERAYVDEYVHTR*
Ga0126350_120168771	3300010880	Boreal Forest Soil	VTIRFGAPMQMDPPANPDDPLENHDHTECRSFTDRLMREIARLSGREYVDEYVPARSSAAAA*
Ga0181526_107570573	3300014200	Bog	ERATNPDDPLADHDHTVCRDFTDDLMKEIARLSERPYVDEYVAKREAR*
Ga0182016_101158443	3300014493	Bog	VNSKWMRPFKTVIIRFGAPMQMDPPENPDDPLANHDHTQCREFTDRLMHEISRLSERPYVDDYVPGRAGVASA*
Ga0182012_105257031	3300014499	Bog	FKTVTIRFGKPMRMDGVVNPDDPMEGHDHTQCRAFTDQLMREIARLSEREYVDDYVPSRSAAQAA*
Ga0182012_109591932	3300014499	Bog	NSNFMRPFKKVTIRFGRPMEMDPPANPNDPMEGHDHTQCRRFTDRLMHEIARLSEREYIDEYVPSRAAAQSA*
Ga0182030_105707021	3300014838	Bog	IRFGTPMQMDPPEDPGDPLANHDHTQCRSFTDRLMHEIARLSDRQYIDEYVPTRASRQSEQAA*
Ga0187780_100552414	3300017973	Tropical Peatland	RFGAPMLMDPPENPADPLENHDHAVCRQFTDRLMREIARLSERPYVDEYVPARPSVATA
Ga0187782_100481024	3300017975	Tropical Peatland	PFKRVIVRFGAPMVMDPPENPDDPLDHDHTVCREFTDRLMHEIARLSERPYIDEYVPARPSPATA
Ga0187782_105222753	3300017975	Tropical Peatland	RPWRTVTIRFGPPMRMPSVADPDDPMADHDHVVCRSFTDRLMEEIARLSGRPYVDEYVPKRQTAR
Ga0187857_101476751	3300018026	Peatland	PENPEDPLENHDHTECRAFTDRLMHEIARLSGREYVDEYVPARTRAAAA
Ga0187869_104654591	3300018030	Peatland	KTVIVRFGAPMQMDPPENPEDPLENHDHTQCRAFTDRLMHEISRLSEREYVDEYVPARTKAAA
Ga0187863_101576681	3300018034	Peatland	PRAMDPPVNPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYIDEYVPARAAAQSA
Ga0187859_103219762	3300018047	Peatland	NSKFMRPFKKVTIRFGQPMEMDPPVNPDDPMEGHDHTQCRDFTDRLMHEIARLSEREYVDEYVPSRAAAQSA
Ga0187858_104662373	3300018057	Peatland	GAPMQMDPPENPDDPLENHDHTECRAFTDRLMHEIARLSERQYVDEYVPARTRAAAA
Ga0187766_105917723	3300018058	Tropical Peatland	FKRVTIRFGEPMVMDPPENPADPLANHDHTVCRDFTDRLMHEIAHLSERDYVDEYVPSRVSTATA
Ga0187784_115626241	3300018062	Tropical Peatland	PPEDPADPLANHDHAECRAFTDRLMREIARLSEREYVDEYVPARMRAATA
Ga0187771_108390061	3300018088	Tropical Peatland	ENPDDPLENHDHAVCREFTDRLMREIARLSERPYVDEYVPSRPSVATA
Ga0187770_100576534	3300018090	Tropical Peatland	AKMMRPFKTVIVRFGAPMLMDPPENPDDPLENHDHAVCREFTDRLMREIARLSERPYVDEYVPSRPSVATA
Ga0210395_105385663	3300020582	Soil	MDPPENPEDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRASAAAS
Ga0210397_112231321	3300021403	Soil	PPENPDDPLANHDHTQCRDFTDRLMREIARLSEREYIDEYVPSRKKAAA
Ga0210386_115065842	3300021406	Soil	ATFMRPFKTVVIRFGAPMQMDPPENPDEPLANHDHTQCRDFTDRLMHEIAALSERPYVDEYVPSRAGVAPA
Ga0210383_113890943	3300021407	Soil	VNRDDPMEGHDHTQCRAFTDNLMHEIARLSERDYVDEYVPARTVPSPVTD
Ga0210384_114419842	3300021432	Soil	VNSNFMRPFKTVRIRFGAPMQMDPPENPEDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRASAAAS
Ga0210391_109954351	3300021433	Soil	PADPTHPLENHDHTQCRAFTDQLMHEIARLSDRPYIDEYVPARPHAAAA
Ga0210402_113404083	3300021478	Soil	KTVRIRFGAPMRMDPPENPDDPLDHDHTKCRAFTDELMKEIARLSEREYVDEYVPSRASAAAS
Ga0210410_112756901	3300021479	Soil	ENPDDPLENHDHTQCRAFTDRLMQEIARLSEREYIDEYVPSRTSAAAA
Ga0210410_117621672	3300021479	Soil	VNSNMLRPFRTVTIRFGRPMRMEEPVNPDDPMEGHDHTQCRAFTDNLMHEIARLSERDYVDEYVPARTVPSPVTD
Ga0212123_105731793	3300022557	Iron-Sulfur Acid Spring	MDPPENPDDPLENHDHTQCRSFTDELMREIARLSDREYVDEYVPSRSARQAA
Ga0208357_10880273	3300025703	Arctic Peat Soil	PFKTVVIRFGKPMQMDPPENPDDPLANHDHTQCRDFTDRLMREISALSERPYVDEYVPSRAGVAPA
Ga0207860_10329931	3300026921	Tropical Forest Soil	GEPMQMDPPENPADPLDHDHTVCRNFTDRLMREIARLSEREYVDEYVPPRAPAAAA
Ga0207855_10629951	3300027039	Tropical Forest Soil	PPENPADPLDHDHTVCRNFTDRLMREIARLSEREYVDEYVPPRAPAAAA
Ga0208982_10995512	3300027574	Forest Soil	VIRFGKPMQMDPPENPDDPLANHDHTQCRDFTDRLMHEIAALSERSYVDEYVPSRAGAAP
Ga0209910_100059173	3300027803	Thawing Permafrost	FKTVTIRFGQPMEMDPPENPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYVDEYVPSRATAQSA
Ga0209693_102692653	3300027855	Soil	DVQPVNSNFMRPFKTVRIRFGPPMQMDPPENPDDPLENHDHGQCRAFTDRLMREIARLSEREYIDEYVPARTSAAAA
Ga0209380_106750863	3300027889	Soil	PENPEDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRASAAAS
Ga0209624_107358412	3300027895	Forest Soil	VNSNFMRPFKTVIIRFGKPLQMDPPENPDDPLANHDHTQCRAFTDELMHEIARLSERAYVDEYVPTRASVASA
Ga0209006_111627462	3300027908	Forest Soil	VQPVNSNFMRPFKTVIIRFGTPMQMDPPENPDDPLANHDHTQCRDFTDRLMHEIAALSERPYVDEYVPSRAGVAPA
Ga0209006_113344931	3300027908	Forest Soil	RTVTIRFGEPVRMDTAADPDHPLADHDHADCRAFTDQLMHEISRLSGRPYRDEYVPRREPAA
Ga0209061_12193671	3300027968	Surface Soil	PPMRMDPPSDVNDPMADHDHTQCRAFTDELMREIARLSEREYLDEYVPSRTARTAA
Ga0302279_100565481	3300028783	Bog	MDPPENPDDPLANHDHTQCRDFTDRLMHEIARLSERPYVDEYVPGRAGVASA
Ga0302221_104586032	3300028806	Palsa	KPMQMDPPENPDDPLANHDHTQCRDFTDRLMHEIARLSDREYIDQYVPTRASRQSDQAA
Ga0302228_105588731	3300028808	Palsa	RFGRPMEMAAPVNPDDPMEGHDHTECRSFTDNLMREIARLSERGYVDEYVPSRATAASA
Ga0302157_103325991	3300028813	Bog	PFKHVTIRFGKPMEMPPPVNPDDPLEGHDHTECRAFTDSLMREIARLSEREYKDEYVPARASASL
Ga0302235_100260471	3300028877	Palsa	KFMRPFKRVTIRFGRPMEMAAPVNPDDPMEGHDHTECRSFTDNLMREIARLSERGYVDEYVPSRATAASA
Ga0302235_100375001	3300028877	Palsa	VTIRFGQPMEMDPPANPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYIDEYVPSRAAAQSA
Ga0302154_104272751	3300028882	Bog	NFMRPFKTVVIRFGKPMQMDPPENPDEPLANHDHTECRDFTDRLMHEIAALSERPYVDEYVPSRAGVAPA
Ga0222749_103702201	3300029636	Soil	NFMRPFKTVRIRFGAPMQMDPPENPEDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRASAAAS
Ga0311368_107871893	3300029882	Palsa	TIRFGEPMQMEAPENPDDPLANHDHTQCRDFTDRLMREIARLSEREYIDEYVPTRASRQSDQAA
Ga0311327_107662982	3300029883	Bog	KFMRPFKKVTIRFGQPMEMDPPENPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYVDEYVPARAAAQSA
Ga0311340_114280202	3300029943	Palsa	FKRVTIRFGRAMEMAPAVNPDDPTEGHDHTECRAFTDALMREIAHLSERPYVDEYVPARAGAGANER
Ga0311371_111234183	3300029951	Palsa	FMHPFKKVTIRFGQPMEMDPPANPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYIDEYVPSRAAAQPA
Ga0311343_111059971	3300029953	Bog	PPENPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYVDEYVPSRATAQSA
Ga0311342_100535091	3300029955	Bog	QPVNANFMRPFKTVIIRFGKPMQMDPPENPDDPLANHDHTQCREFTDRLMHEISRLSERPYVDDYVPGRAGVASA
Ga0311339_106764813	3300029999	Palsa	RPFKTVVIRFGTPMRMDPPENPDDPLANHDHTQCRRFTDRLMHEISRLSERPYVDQYVPGRPGVATA
Ga0311338_119600861	3300030007	Palsa	FMRPFKTVVIRFGTPMRMDPPENPDDPLANHDHTQCRHFTDRLMHEISRLSERPYVDQYVPGRPGVATA
Ga0302178_101781403	3300030013	Palsa	PVNSKFMRPFKKVTIRFGEPMEMDPPVNPDDPMEGHDHTQCRSFTDRLMHEIARLSEREYIDEYVPSRAAAQSA
Ga0311344_113441152	3300030020	Bog	VKIRFGQPMEMDPPENPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYVDEYVPARAAAQSA
Ga0311370_109346531	3300030503	Palsa	RFGPPMQMDPPENPDDPLEGHDHTECRTFTDRLMHEIAKLSERDYVDEYVPARAKATA
Ga0311370_124328231	3300030503	Palsa	VEVQPVNSKFMRPFKKVTIRFGQPMEMDPPVNPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYIDEYVPSRAAAQSA
Ga0311372_105901201	3300030520	Palsa	VNSRFMRPFKTVTIRFGTPMQMDPPEDPDDPLANHDHTQCRSFTDRLMQEIARLSDRQYIDEYVPTRAGRRAEAA
Ga0311357_101363291	3300030524	Palsa	PFKKVTIRFGEPMEMDPPVNPDDPMEGHDHTQCRSFTDRLMHEIARLSEREYIDEYVPSRAAAQSA
Ga0311356_103707301	3300030617	Palsa	GQPMEMAAPVNPDDPMEGHDHTECRSFTDNLMREIARLSERGYVDEYVPSRATAASA
Ga0311354_115713061	3300030618	Palsa	EVQPVNSKFMRPFKKVTIRFGQPMEMDPPANPDDPLEGHDHTQCRRFTDRLMHEIARLSEREYIDEYVPSRVTAQSA
Ga0170834_1090998892	3300031057	Forest Soil	RLVYFYFMLPFKTVIIRFGAPMQMDPPENPDDPLANHDHTECRAFTDRLIHEIARLSEREYVDDYVPTRASAASG
Ga0265760_101051633	3300031090	Soil	VNSNMLRPFKTATIRFGRPMRMEEPVNPEDPMEGHDHTQCRAFTDNLMHEIARLSERDYVDEYVPARTVPSPVTD
Ga0302325_132663192	3300031234	Palsa	PPANPDDPLEGHDHRECRRFTDELMKEIARLSERPYVDEYVPARTPA
Ga0302324_1030635442	3300031236	Palsa	RPFKKVTIRFGEPMEMDPPVNPDDPMEGHDHTQCRRFTDRLMREIARLSERPYIDEYVPSRAAAKSA
Ga0302324_1035282162	3300031236	Palsa	IRFGQPMEMDPPENPAEPLEGHDHTQCRSFTDRLMHEIARLSERPYVDEYVPARASAASA
Ga0302324_1035651971	3300031236	Palsa	MDPPANPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYIDEYVPSRAAAQSA
Ga0302187_105698382	3300031259	Bog	VVIRFGAPMQMDPPVNPDDPLANHDHTQCRDFTDRLMHEIARLSERPYVDEYVPGRAGVASA
Ga0302326_111460681	3300031525	Palsa	NSKFMRPFKKVTIRFGQPMEMDPPANPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYVDEYVPSRVIARSA
Ga0318515_105394571	3300031572	Soil	PFKTVRIRFGAPMLMEPPEDPEHPLENHDHTKCRTFTDELMKQIARLSEREYLDEYVPARTKVASA
Ga0318555_101294613	3300031640	Soil	VNSNMMRPFKTVTIRFGKPIQMDPPEDPIHPLENHDHTQCRAFTDRLMHEIARLSEREYVDEYVPSRTKAAA
Ga0307372_103569893	3300031671	Soil	IRFGQPMQMDSPINPDDPMEGHDHTECRSFTDRLMHEIARLSEREYVDEYVPSRSTAKAA
Ga0310686_1022818921	3300031708	Soil	VMRPFKTVTIRFGKPMQMDPPENPDAPLENHDHTQCRDFTNELMHEIARLSEREYVDEYVPAKTAKATA
Ga0310686_1037654943	3300031708	Soil	NAKFMRPFKTVTIRFGTPMQMDPPENPDEPLANHDHTQCRSFTDRLMQEIARLSERQYVDEYVPSRTGRQSEQAA
Ga0310686_1098657781	3300031708	Soil	VRFGEPMEMEPPANLDDPLQGHDHTQCRSFTDRLMGEIARLSERPYVDEYVPSRAAA
Ga0310686_1177224461	3300031708	Soil	PQNPEDPLDGHDHTQCRSFTDRLMHEIARLSERPYVDEYVPSRASASAA
Ga0318493_103441143	3300031723	Soil	FKTVTIRFGKPMQMEPPEDPAHPLENHDHTQCRAFTDRLMHEIARLSEREYVDEYVPSRTRAAA
Ga0306918_107697971	3300031744	Soil	KTVRIRFGAPMLMEPPEDPDHPLEGHDHTKCRAFTDELMKEIARLSGREYVDEYVPARTKVTSA
Ga0306918_113439132	3300031744	Soil	MQMDPPENPDDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRSSAAAS
Ga0318546_113076352	3300031771	Soil	VRIRFGAPMLMEPPEDPEHPLENHDHTKCRAFTDELMKEIARLSEREYVDAYVPARTKVASA
Ga0318547_108304941	3300031781	Soil	VTIRFGKPMQMEPPEDPAHPLENHDHTQCRAFTDRLMHEIARLSEREYVDEYVPSRTRAA
Ga0318568_101059671	3300031819	Soil	MEPPEDPDHPLEGHDHTKCRAFTDELMKEIARLSGREYVDEYVPARTKVTSA
Ga0318527_101621461	3300031859	Soil	QMDPPENPADPLDHDHTVCRNFTDRLMHEVARLSEREYVDEYVPPRAPAAAA
Ga0306925_115257521	3300031890	Soil	VRIRFGAPMQMDPPENPDDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRSSAAA
Ga0306923_116284831	3300031910	Soil	FGKPMLMDPPEDPAHPLENHDHTQCRAFTDRLMHEIARLSEREYVDEYVPTRTKAAA
Ga0318530_102853773	3300031959	Soil	PMQMEPPEDPAHPLENHDHTQCRAFTDRLMHEIARLSEREYVDEYVPSRTRAAA
Ga0318530_104756412	3300031959	Soil	FKTVRIRFGTPMQMDPPENPDDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRSSAAAS
Ga0306922_117065251	3300032001	Soil	DPAHPLENHDHTHCRAFTDRLMHEIARLSEREYVDEYVPTRTKAAA
Ga0318562_102129473	3300032008	Soil	PPENPDDPLDHDHTVCRSFTDRLMREIARLSEREYVDEYVPPRAPAAAA
Ga0318510_105168651	3300032064	Soil	SNVMRPFKTVRIRFGEPMQMDPPENPDDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRSSAAAS
Ga0306924_123691012	3300032076	Soil	MQMDPPENPADPLDHDHTLCRAFTDRLMREIARLSEREYVDEYVPPRAPATAA
Ga0318540_102840383	3300032094	Soil	SNFMRPFKTVRIRFGTPMQMDPPENPDDPLDHDHTKCRSFTDELMKEIARLSEREYVDEYVPSRSSAAAS
Ga0318540_104748753	3300032094	Soil	PQDPAHPLENHDHTHCRAFTDRLMHEIARLSEREYVDEYVPTRTKAAA
Ga0311301_116151993	3300032160	Peatlands Soil	RNMATPVNPDDPMEGHDHTECRTFTDSLMREIARLSERAYVDEYVHTR
Ga0306920_1013786933	3300032261	Soil	VDVQPVNSNVMRPFKTVTIRFGKPMQMEPPEDPAHPLENHDHTQCRAFTDRLMHEIARLSEREYVDEYVPSRTRAAA
Ga0335072_112056411	3300032898	Soil	PVNAKFMRPFKTVTIRFGKPMQMDPPENPDDPLANHDHTQCRDFTDRLMREIARLSEREYVDEYVPSRASRQSDQAA
Ga0370483_0149793_1_189	3300034124	Untreated Peat Soil	VVIRFGAPMQMDPPENPEDPLANHDHTQCRDFTDRLMHEISRLSERPYVDVYVPGRAGVASA
Ga0370514_053861_3_197	3300034199	Untreated Peat Soil	KKVTIRFGAPMEMDPPVNPDDPMEGHDHTQCRRFTDRLMHEIARLSEREYVDEYVPARAAAQSA
Ga0370514_120981_454_654	3300034199	Untreated Peat Soil	MRPFKRVTIRFGKPMEMAAPVNPDDPMEGHDHTECRSFTDNLMREIARLSERGYVDEYVPSRASAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073893

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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