Metagenome Family F073906

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073906
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	59 residues
Representative Sequence	MEQDDLIFLGAAVLLGQMTSRRPPDPTDIKAAVQTARDLRDEVNQQHEEARAKKEPKKL
Number of Associated Samples	88
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.67 %
% of genes near scaffold ends (potentially truncated)	32.50 %
% of genes from short scaffolds (< 2000 bps)	74.17 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.167 % of family members)
Environment Ontology (ENVO)	Unclassified (44.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.02% β-sheet: 0.00% Coil/Unstructured: 45.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF03544	TonB_C	10.83
PF00072	Response_reg	8.33
PF00486	Trans_reg_C	3.33
PF08282	Hydrolase_3	1.67
PF01070	FMN_dh	1.67
PF00873	ACR_tran	0.83
PF13432	TPR_16	0.83
PF00440	TetR_N	0.83
PF00383	dCMP_cyt_deam_1	0.83
PF13180	PDZ_2	0.83
PF13570	PQQ_3	0.83
PF00011	HSP20	0.83
PF01494	FAD_binding_3	0.83
PF07488	Glyco_hydro_67M	0.83
PF04389	Peptidase_M28	0.83
PF07731	Cu-oxidase_2	0.83
PF05988	DUF899	0.83
PF03861	ANTAR	0.83
PF13546	DDE_5	0.83
PF12088	DUF3565	0.83
PF02518	HATPase_c	0.83
PF04326	AlbA_2	0.83
PF08241	Methyltransf_11	0.83
PF00202	Aminotran_3	0.83
PF00291	PALP	0.83
PF13442	Cytochrome_CBB3	0.83
PF14310	Fn3-like	0.83
PF01425	Amidase	0.83
PF07732	Cu-oxidase_3	0.83
PF03061	4HBT	0.83
PF10041	DUF2277	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	10.83
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.67
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	1.67
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	1.67
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.67
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.67
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	1.67
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.67
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	1.67
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	1.67
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.83
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.83
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.83
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.83
COG3661	Alpha-glucuronidase	Carbohydrate transport and metabolism [G]	0.83
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.83
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.50 %
Unclassified	root	N/A	42.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.50 %
Unclassified	root	N/A	42.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.50 %
Unclassified	root	N/A	42.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.83 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.17 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.83 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16574419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1899	Open in IMG/M
2088090014\|GPIPI_16977992	Not Available	1152	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101286623	Not Available	943	Open in IMG/M
3300000789\|JGI1027J11758_11838143	Not Available	649	Open in IMG/M
3300000955\|JGI1027J12803_101648690	Not Available	946	Open in IMG/M
3300001867\|JGI12627J18819_10038265	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1997	Open in IMG/M
3300004114\|Ga0062593_103367419	Not Available	513	Open in IMG/M
3300005167\|Ga0066672_10885516	Not Available	554	Open in IMG/M
3300005175\|Ga0066673_10130726	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300005177\|Ga0066690_10381065	Not Available	957	Open in IMG/M
3300005179\|Ga0066684_10490236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	825	Open in IMG/M
3300005445\|Ga0070708_100005368	All Organisms → cellular organisms → Bacteria	10169	Open in IMG/M
3300005445\|Ga0070708_100067871	All Organisms → cellular organisms → Bacteria	3204	Open in IMG/M
3300005445\|Ga0070708_100103284	All Organisms → cellular organisms → Bacteria	2612	Open in IMG/M
3300005446\|Ga0066686_10183481	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300005467\|Ga0070706_100844999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300005471\|Ga0070698_100055403	All Organisms → cellular organisms → Bacteria → Acidobacteria	4021	Open in IMG/M
3300005518\|Ga0070699_101290355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300005540\|Ga0066697_10470080	Not Available	720	Open in IMG/M
3300005555\|Ga0066692_10138954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300006173\|Ga0070716_101113826	Not Available	630	Open in IMG/M
3300006175\|Ga0070712_101398958	Not Available	610	Open in IMG/M
3300006854\|Ga0075425_100389452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1605	Open in IMG/M
3300006893\|Ga0073928_10005003	All Organisms → cellular organisms → Bacteria	18951	Open in IMG/M
3300007788\|Ga0099795_10086055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300007788\|Ga0099795_10247721	Not Available	767	Open in IMG/M
3300009038\|Ga0099829_10000353	All Organisms → cellular organisms → Bacteria	23998	Open in IMG/M
3300009089\|Ga0099828_10039229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3869	Open in IMG/M
3300009143\|Ga0099792_10138265	Not Available	1328	Open in IMG/M
3300009143\|Ga0099792_10954123	Not Available	570	Open in IMG/M
3300010303\|Ga0134082_10549607	Not Available	508	Open in IMG/M
3300011269\|Ga0137392_10360934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1204	Open in IMG/M
3300012200\|Ga0137382_11271108	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300012202\|Ga0137363_10000830	All Organisms → cellular organisms → Bacteria	17247	Open in IMG/M
3300012202\|Ga0137363_10195389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1620	Open in IMG/M
3300012202\|Ga0137363_10386360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300012202\|Ga0137363_10565325	Not Available	958	Open in IMG/M
3300012202\|Ga0137363_11150896	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012202\|Ga0137363_11368808	Not Available	597	Open in IMG/M
3300012205\|Ga0137362_10810080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	802	Open in IMG/M
3300012205\|Ga0137362_10968061	Not Available	725	Open in IMG/M
3300012205\|Ga0137362_11378321	Not Available	591	Open in IMG/M
3300012210\|Ga0137378_10912179	Not Available	792	Open in IMG/M
3300012210\|Ga0137378_11471446	Not Available	593	Open in IMG/M
3300012350\|Ga0137372_10720175	Not Available	721	Open in IMG/M
3300012357\|Ga0137384_10676152	Not Available	839	Open in IMG/M
3300012362\|Ga0137361_10238965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1653	Open in IMG/M
3300012362\|Ga0137361_10809941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300012363\|Ga0137390_11801825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012582\|Ga0137358_10491223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300012683\|Ga0137398_10076928	All Organisms → cellular organisms → Bacteria → Acidobacteria	2048	Open in IMG/M
3300012685\|Ga0137397_10616558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300012917\|Ga0137395_10286039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300012923\|Ga0137359_10125765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2277	Open in IMG/M
3300012923\|Ga0137359_10241756	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300012924\|Ga0137413_10936517	Not Available	675	Open in IMG/M
3300012929\|Ga0137404_10023926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4446	Open in IMG/M
3300012929\|Ga0137404_10036154	All Organisms → cellular organisms → Bacteria	3695	Open in IMG/M
3300012929\|Ga0137404_12297592	Not Available	505	Open in IMG/M
3300012930\|Ga0137407_10144708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2094	Open in IMG/M
3300015241\|Ga0137418_10152202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2037	Open in IMG/M
3300015245\|Ga0137409_10898125	Not Available	722	Open in IMG/M
3300015264\|Ga0137403_11020914	Not Available	674	Open in IMG/M
3300015373\|Ga0132257_100010923	All Organisms → cellular organisms → Bacteria	9106	Open in IMG/M
3300017927\|Ga0187824_10006888	All Organisms → cellular organisms → Bacteria → Acidobacteria	3201	Open in IMG/M
3300017930\|Ga0187825_10004909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4452	Open in IMG/M
3300018431\|Ga0066655_11241271	Not Available	531	Open in IMG/M
3300018482\|Ga0066669_10048137	All Organisms → cellular organisms → Bacteria	2673	Open in IMG/M
3300019789\|Ga0137408_1059784	Not Available	729	Open in IMG/M
3300019789\|Ga0137408_1330655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3686	Open in IMG/M
3300019881\|Ga0193707_1193882	Not Available	525	Open in IMG/M
3300019882\|Ga0193713_1090648	Not Available	856	Open in IMG/M
3300019887\|Ga0193729_1008738	All Organisms → cellular organisms → Bacteria	4657	Open in IMG/M
3300020199\|Ga0179592_10248360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300020199\|Ga0179592_10437964	Not Available	566	Open in IMG/M
3300020579\|Ga0210407_10032919	All Organisms → cellular organisms → Bacteria	3857	Open in IMG/M
3300020579\|Ga0210407_10752370	Not Available	754	Open in IMG/M
3300021046\|Ga0215015_10783761	Not Available	926	Open in IMG/M
3300021086\|Ga0179596_10619415	Not Available	549	Open in IMG/M
3300021168\|Ga0210406_10001283	All Organisms → cellular organisms → Bacteria → Acidobacteria	31313	Open in IMG/M
3300022557\|Ga0212123_10009436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14270	Open in IMG/M
3300024232\|Ga0247664_1003810	All Organisms → cellular organisms → Bacteria	3412	Open in IMG/M
3300024254\|Ga0247661_1073625	Not Available	636	Open in IMG/M
3300024288\|Ga0179589_10153281	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300025910\|Ga0207684_11412481	Not Available	569	Open in IMG/M
3300025915\|Ga0207693_11079085	Not Available	611	Open in IMG/M
3300025922\|Ga0207646_10246546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1613	Open in IMG/M
3300025922\|Ga0207646_10378412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279	Open in IMG/M
3300025939\|Ga0207665_10440300	Not Available	998	Open in IMG/M
3300026088\|Ga0207641_10018947	All Organisms → cellular organisms → Bacteria	5645	Open in IMG/M
3300026374\|Ga0257146_1036026	Not Available	803	Open in IMG/M
3300027502\|Ga0209622_1056870	Not Available	710	Open in IMG/M
3300027512\|Ga0209179_1058748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300027512\|Ga0209179_1125337	Not Available	574	Open in IMG/M
3300027903\|Ga0209488_10001736	All Organisms → cellular organisms → Bacteria → Acidobacteria	18458	Open in IMG/M
3300028281\|Ga0247689_1009197	Not Available	1238	Open in IMG/M
3300031057\|Ga0170834_103837628	Not Available	763	Open in IMG/M
3300031128\|Ga0170823_10749917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300031128\|Ga0170823_14785911	Not Available	649	Open in IMG/M
3300031231\|Ga0170824_101723975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300031231\|Ga0170824_104002532	Not Available	584	Open in IMG/M
3300031231\|Ga0170824_115841368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300031231\|Ga0170824_120705113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031446\|Ga0170820_15151979	Not Available	766	Open in IMG/M
3300031474\|Ga0170818_111732200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300031474\|Ga0170818_115622357	Not Available	501	Open in IMG/M
3300031715\|Ga0307476_10130728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1793	Open in IMG/M
3300031718\|Ga0307474_10369144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300031720\|Ga0307469_10090954	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300031754\|Ga0307475_10036268	All Organisms → cellular organisms → Bacteria	3624	Open in IMG/M
3300031754\|Ga0307475_10179681	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300031823\|Ga0307478_10126539	All Organisms → cellular organisms → Bacteria → Acidobacteria	2008	Open in IMG/M
3300031823\|Ga0307478_11760409	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300031962\|Ga0307479_10015272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7204	Open in IMG/M
3300031962\|Ga0307479_10602161	Not Available	1081	Open in IMG/M
3300031962\|Ga0307479_10799511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300032174\|Ga0307470_10156434	Not Available	1401	Open in IMG/M
3300032180\|Ga0307471_100066995	Not Available	3073	Open in IMG/M
3300032180\|Ga0307471_102204605	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300032205\|Ga0307472_102192357	Not Available	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.50%
Host-Associated	Host-Associated	2.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.17%
Aquatic	Environmental → Aquatic	3.33%
Plants	Host-Associated → Plants	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.17%
Freshwater	Environmental → Aquatic → Freshwater	1.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.83%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.67%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.67%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00597120	2088090014	Soil	MDQDEVIFLGAAVLLAQVVSQLTPDHNEIKTAVLTARHLRAEVSRQLEEARAKLPPGEPKKS
GPIPI_00267890	2088090014	Soil	MEQDDLIFFGAAVLLGRMIGQKPPDDAEIKAAVTTARSLRVEVERQHQEARMKQEPTKLK
INPhiseqgaiiFebDRAFT_1012866232	3300000364	Soil	MEQDDLIFLGAAVLLGQMVVQRPPDQAEIKAAVTTARILRDEVERQHAEAREKKELKKLK
JGI1027J11758_118381431	3300000789	Soil	YSFQSRRGTLMEQDDLIFLGAAVLLGQMVVQRPPDQAEIKAAVTTARILRDEVERQHAEAREKKELKKLK*
JGI1027J12803_1016486902	3300000955	Soil	AVLLVRMVGQKPPDDSEIKTAVITARSLRLEVERQHEEARVKKEPKKLK*
JGI12627J18819_100382652	3300001867	Forest Soil	MEQDDLIFLGAAVILAQMVSQRPPEHSEIKSAVSTARNLRDEVERQHEEARAKKEIKKP*
Ga0062593_1033674191	3300004114	Soil	MEQDDLIFFGAAVLLLRMVGQRPPDDGEIKTAVITARSLRVEVERQHEEARVKKEPKKLK
Ga0066672_108855161	3300005167	Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPKKF*
Ga0066673_101307262	3300005175	Soil	MEQDELIFLGAAVLLGQMASHRPPDPDEIKTAVQTARNLRDEVEQQHEDARARKEPKKV*
Ga0066690_103810652	3300005177	Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIRTAVQTARNLRAEVDQQHEDARAKKEPKKF*
Ga0066684_104902361	3300005179	Soil	TGMEQDELIFLGAAVLLGQMASHRPPDPDEIKTAVQTARNLRDEVEQQHEDARARKEPKKV*
Ga0070708_1000053687	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEQDDLIFLGAAVLLGQMVSQRPPDQSEIRAAVQAARNLRDEVNQQHEEARARREPKKS*
Ga0070708_1000678714	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKAAVQTARNLRAEVDQQHEDARAKKEPKKF*
Ga0070708_1001032845	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVEQQHEDARAKKEPKKF*
Ga0066686_101834811	3300005446	Soil	KDMEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPKKL*
Ga0070706_1008449992	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVEQQHEDARAKKEPRKL*
Ga0070698_1000554034	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MEQDDLIFLGAAVLLGQMVSQRPPDQSEIRAAVQAARNLRDEVNQQHEEARARKEPKKS*
Ga0070699_1012903552	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EYRNMEQDDLIFLGAAVLLGQMVSQRPPDQSEIRAAVQAARNLRDEVNQQHEEARARREPKKS*
Ga0066697_104700801	3300005540	Soil	MEQDELIFFGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVEQQHEDARAKKEPKKL*
Ga0066692_101389541	3300005555	Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPRKL*
Ga0070716_1011138262	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VEQDDLIFLGAAILLGQMVGQRQPDQTEIKTAVTTARSLRDEVERQHQEARMK
Ga0070712_1013989581	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ATVFHARQTDMEQDDLIFLGAAVLLAQMARERPPEPSEIKSAVSAARNLRDEVERQHEEARAKKEVKKP*
Ga0075425_1003894523	3300006854	Populus Rhizosphere	MEQDDLIFLGAVMLLGQMVAQRPPDQTEIKTAVTTARNLRVEVERQHAEAREKKEPKKLK
Ga0073928_100050032	3300006893	Iron-Sulfur Acid Spring	MEQDDLIFLGAAVLLGQMASRKPPDPTDIKAAVQTARDLRDEVNQQHEDARAKKEPKKP*
Ga0099795_100860552	3300007788	Vadose Zone Soil	DLIFLGGARIFEKKTSRRPPDPADIKAAVQTARDLRDEVNQQHEEARAKKEPKKP*
Ga0099795_102477212	3300007788	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMSSRKPPDHTDIQAAVQTARELRDEVNQQHEDARAKKEPKKL*
Ga0099829_100003531	3300009038	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEPKKP*
Ga0099828_100392291	3300009089	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASGKPPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEPKKP*
Ga0099792_101382651	3300009143	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARELRDEVNQQHEDARAKKEPKKL*
Ga0099792_109541231	3300009143	Vadose Zone Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVEQQHEDARAKKEPKKL*
Ga0134082_105496071	3300010303	Grasslands Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHED
Ga0137392_103609342	3300011269	Vadose Zone Soil	MEQDDLIFLGAAVLLVQMSSRNPPDHTDIQAAVQTARELRDEVNQQHEDARAKKEPKKP*
Ga0137382_112711081	3300012200	Vadose Zone Soil	MEQDELIFLGAAVLLGQMVSQRPPDATDIKAAVQTARNLRAEVDQQHEDARAKKEPKKF*
Ga0137363_100008307	3300012202	Vadose Zone Soil	MEQDDLIFLGAAVLLSQMASQRPPDQSEIRAAVQTARNLRDEVNQQHEEARAKKEPRKS*
Ga0137363_101953893	3300012202	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKRPDHSDIQAAVQTARDLRDEVNQQHEDARAKKEPKKP*
Ga0137363_103863601	3300012202	Vadose Zone Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPKKL*
Ga0137363_105653251	3300012202	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASQRTPDQSEIRAAVQAARNLRDEVNQQHEEARARKEPKKS*
Ga0137363_111508961	3300012202	Vadose Zone Soil	TRQTDMEQDDLIFLGAAVILGQMVSQRPPDQTEIKNAVSAARNLRDEVERQHEEARAKKEIKKP*
Ga0137363_113688081	3300012202	Vadose Zone Soil	MEQDDLIFLGAAVLLGPMASGKPPDPTDIQAAVQTARALRDEVNQQHEDARAKKEPRKSETIGR*
Ga0137362_108100802	3300012205	Vadose Zone Soil	MEQDDLIFLGAAVILGQMVSQRPPDQTEIKNAVSAARNLRDEVERQHEEARAKKEIKKP*
Ga0137362_109680611	3300012205	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMTSRRPPDPTDIKAAVQTARDLRDEVNQQHEDARAKKEPKKL*
Ga0137362_113783212	3300012205	Vadose Zone Soil	FLGAAVLLGQMVSQRPPDPTVISPAVQTARNLRAEVDQQHEDARAKKEPKKF*
Ga0137378_109121791	3300012210	Vadose Zone Soil	AAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVEQQHEDARAKKEPKKF*
Ga0137378_114714461	3300012210	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEP
Ga0137372_107201753	3300012350	Vadose Zone Soil	LGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPRKL*
Ga0137384_106761521	3300012357	Vadose Zone Soil	VEQDDLIFLGAAVLLGQMASRKPPDPTDIKAAVQTARDLRDEVNQQHEDARAKKEPKKL*
Ga0137361_102389651	3300012362	Vadose Zone Soil	MEQDDLIFLGAAVLLSQMASQRPPDQSEIRAAVQTARNLRDEVNQQHEESRSKKEPRKS*
Ga0137361_108099413	3300012362	Vadose Zone Soil	MEQDDLIFLGAAVILGQMVSQRPQDQTEIKNAVSAARNLRDEVERQHEEARAKKEIKKP*
Ga0137390_118018252	3300012363	Vadose Zone Soil	ADGRTVTTFSAQARSINSMEQDDLIFLGAAVLLGQMASRKRPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEPKKP*
Ga0137358_104912231	3300012582	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEPKKL*
Ga0137398_100769282	3300012683	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEEARAKKEPKRP*
Ga0137397_106165582	3300012685	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRRPPDPADIKAAVQTARDLRDEVNQQHEE
Ga0137395_102860392	3300012917	Vadose Zone Soil	SAQARSINSMEQDDLIFLGAAVLLGQMASRKRPDHSDIQAAVQTARDLRDEVNQQHEDARAKKEPKKP*
Ga0137359_101257654	3300012923	Vadose Zone Soil	MDQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEPKKP*
Ga0137359_102417562	3300012923	Vadose Zone Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPKKLSGSNSRS*
Ga0137413_109365171	3300012924	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEEARAKKEPKKP*
Ga0137404_100239261	3300012929	Vadose Zone Soil	KDMEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPKKF*
Ga0137404_100361545	3300012929	Vadose Zone Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKAAVQTARNLRAEVDQQHEDARAKKEPKKL*
Ga0137404_122975921	3300012929	Vadose Zone Soil	MEQDDLIFLGAAVLLGPMASGKPPDPTDIQAAVQTARALRDEVNQQHEDARAKKEPRKS
Ga0137407_101447082	3300012930	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMTSRRPPDPTDIKAAVQTARDLRDEVNQQHEEARAKKEPKKL*
Ga0137418_101522021	3300015241	Vadose Zone Soil	MEQDDLIFFGAAVLLGQMVSQRPPDDNEIKAAVQAARSLRDEVNRQHEEARAKPTFISDRKKP*
Ga0137409_108981252	3300015245	Vadose Zone Soil	QARSTKSMEQDDLIFLGAAVLLGPMASGKPPDPTDIQAAVQTARALRDEVNQQHEDARAKKEPRKSETIGR*
Ga0137403_110209141	3300015264	Vadose Zone Soil	IACEEYRNMEQDDLIFLGAAVLLGQMASQRTPDQSEIRAAVQAARNLRDEVNQQHEEARARKEPKKS*
Ga0132257_1000109238	3300015373	Arabidopsis Rhizosphere	MEQDDLIFLGAAVLLGQMVVQRPPDQAEIKTAVTTARILRDEVERQHAEAREKKELRKLK
Ga0187824_100068881	3300017927	Freshwater Sediment	MEQDDLIFFGAAVLLGRMASENPPGQAEIKTAVSIARNLRDEVERQHEEARIKRETRKIK
Ga0187825_100049093	3300017930	Freshwater Sediment	MEQDDLIFFGAAVLLGRMGSENPPGQAEIKTAVSIARNLRDEVERQHEEARIKRETRKIK
Ga0066655_112412711	3300018431	Grasslands Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPKKF
Ga0066669_100481372	3300018482	Grasslands Soil	MEQDELIFLGAAVLLGQMASHRPPDPDEIKTAVQTARNLRDEVEQQHEDARARKEPKKV
Ga0137408_10597842	3300019789	Vadose Zone Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKVAVQTARNLRAEVDQQHEDARAKKEPKKL
Ga0137408_13306555	3300019789	Vadose Zone Soil	KDMEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVDQQHEDARAKKEPKK
Ga0193707_11938821	3300019881	Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEEARAKKEPKKP
Ga0193713_10906481	3300019882	Soil	MEQDDLIFLGAAVLLGQMTSRRPPDPTDIKAAVQTARDLRDEVNQQHEDARAKKEPKKL
Ga0193729_10087386	3300019887	Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARELRDEVNQQHEEARAKKVPKKP
Ga0179592_102483602	3300020199	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRRPPDPADIKAAVQTARDLRDEVNQQHEEARAKKEPKKP
Ga0179592_104379641	3300020199	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEPKKP
Ga0210407_100329192	3300020579	Soil	MEQDDLIFLGAAVILAQMVSQRPPEHSEIKSAVSTARNLRDEVERQHEEARAKKEIKKP
Ga0210407_107523702	3300020579	Soil	MEQDDLIFLGAAVILGQMASQRPPEQSEIKSAVSTARNLRDEVERQHEEARAKKEIKKP
Ga0215015_107837611	3300021046	Soil	MEQDDLIFLGAAVLLGPMASGKPPDPTDIQAAVQTARALRDEVNQQHEDARAKKESELRK
Ga0179596_106194151	3300021086	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEPKKL
Ga0210406_1000128315	3300021168	Soil	MEQDDLIFLGAAVILAQMGSQRPPEHSEIKSAVATARNLRDEVERQHEEARAKKEIKKP
Ga0212123_100094368	3300022557	Iron-Sulfur Acid Spring	MEQDDLIFLGAAVLLGQMASRKPPDPTDIKAAVQTARDLRDEVNQQHEDARAKKEPKKP
Ga0247664_10038106	3300024232	Soil	MEQDDLIFLGAAVLLGQMVVQRPPDQAEIKTAVTTARILRDEVERQHAEAREKKELKKLK
Ga0247661_10736251	3300024254	Soil	MEQDDLIFLGAAVLLGQMVIQREPNQTEIKTAVTTARNLRDEVERQHEEARAKKEFRKT
Ga0179589_101532812	3300024288	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMVSQRPPDQSEIRAAVQAARNLRDEVNQQHEEARARKEPKKS
Ga0207684_114124811	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVYQQHEDARAKKEPKKF
Ga0207693_110790851	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ATVFHARQTDMEQDDLIFLGAAVLLAQMARERPPEPSEIKSAVSAARNLRDEVERQHEEARAKKEVKKP
Ga0207646_102465461	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVEQQHEDARAKKEPKKF
Ga0207646_103784121	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVEQQHE
Ga0207665_104403001	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ARSTKDMEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVRTARNLRAEVEQQHEDARAKKEPRKL
Ga0207641_100189475	3300026088	Switchgrass Rhizosphere	MEQDDLIFLGAAMLLGQIVAQRPPDQTEIKTAVTTARNLRVEVERQHAEAREKREPKKPK
Ga0257146_10360261	3300026374	Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEDA
Ga0209622_10568701	3300027502	Forest Soil	LIFLGAAVILAQMVSQRPPEHSEIKSAVSTARNLRDEVERQHEEARAKKEIKKP
Ga0209179_10587482	3300027512	Vadose Zone Soil	FLGAAVLLGQMSSRKPPDHTDIQAAVQTARELRDEVNQQHEEARAKKEPKKP
Ga0209179_11253372	3300027512	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMSSRKPPDHTDIQAAVQTARELRDEVNQQHEDARAKKEPK
Ga0209488_100017362	3300027903	Vadose Zone Soil	MEQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARELRDEVNQQHEDARAKKEPKKL
Ga0247689_10091972	3300028281	Soil	AAVLLGQMVVQRPPDQAEIKTAVTTARILRDEVERQHAEAREKKELKKLK
Ga0170834_1038376282	3300031057	Forest Soil	MEQDDLIFLGAAVLLGQMASGKPPDHTDIQAAVQTARDLRDEVNQQHEEARAKKEPKKP
Ga0170823_107499171	3300031128	Forest Soil	MEQDDLIFLGAAVLLGQMASRKPLDHTDIQAAVQTARDLRDEVNLQHEEARAKKEPKKP
Ga0170823_147859112	3300031128	Forest Soil	MEQDDLIFLGAAVLLGQMASRRPPDPADIKAAVQTARDLRDEVNQQHEEAPKYGAR
Ga0170824_1017239753	3300031231	Forest Soil	MEQDDLIFLGAAVLLGQMASRRPPDPADIKAAVQTARDLRDEVNQQHEEAPKYGA
Ga0170824_1040025322	3300031231	Forest Soil	ARQIDMEQDDLIFLGAAVILGQMASQRPPQQDEIKSAVSTARKLRDEVERQHEEARAKKEIKKP
Ga0170824_1158413681	3300031231	Forest Soil	HTVITFSARARSINSMEQDDLIFLGAAVLLGQMASRKPLDHTDIQAAVQTARDLRDEVNLQHEEARAKKEPKKP
Ga0170824_1207051132	3300031231	Forest Soil	ATVFHARQTDMEQDDLIFLGAAVILGQMVSQRPPEQSEIKSAVSTARNLRDEVERQHEEARAKKEIKKP
Ga0170820_151519792	3300031446	Forest Soil	LIFLGAAVILGQMVSQRPPDQTEIKNAVSTARNLRDEVERQHEEARAKKEIKKP
Ga0170818_1117322003	3300031474	Forest Soil	NSMEQDDLIFLGAAVLLGQMASRKPLDHTDIQAAVQTARDLRDEVNLQHEEARAKKEPKK
Ga0170818_1156223571	3300031474	Forest Soil	MEQDDLIFLGAAVILGQMVSQRPPDQTEIKNAVSTARNLRDEVERQHEEARAKKEIKKP
Ga0307476_101307282	3300031715	Hardwood Forest Soil	MDQDDLIFLGAAVLLGPMTSRKPPDPTDIQAAVQTARALRDEVNQQHEEARAKKDSELRK
Ga0307474_103691442	3300031718	Hardwood Forest Soil	MEQDELIFFGAAVLLGRMGSENPPGQAEIKTAVSVARNLRDEVERQHEEARIKRETRKIK
Ga0307469_100909543	3300031720	Hardwood Forest Soil	MEQDELIFLGAAVLLGQMVSQRPPDPTDIKTAVQTARNLRAEVEQQHEDARAKKEPKKL
Ga0307475_100362682	3300031754	Hardwood Forest Soil	MEQDDLIYLGAAVLLGQMVMQREPDQTEIKTAVTTARNLRDEVERQHQEARAKKEIRKA
Ga0307475_101796812	3300031754	Hardwood Forest Soil	MDQDDLIFLGAAVLLGPMPSGKPPDPAHIQAAVQTARALRDEVNQQHEEARAKKDSELRK
Ga0307478_101265391	3300031823	Hardwood Forest Soil	MEQDDLIFFGAAVLLGRMGSENPPGQAEIKTAVSIARSLRDEVERQHEEARIKRETPYKI
Ga0307478_117604091	3300031823	Hardwood Forest Soil	EYMEQDDLIYLGAAVLLGQMVMQREPDQTEIKTAVTTARNLRDEVERQHQEARAKKEIRK
Ga0307479_100152726	3300031962	Hardwood Forest Soil	MDQDDLIFLGAAVLLGPMTSGKPPDATDIQAAVQTARALRDEVNQQHEDARAKKDSELRR
Ga0307479_106021611	3300031962	Hardwood Forest Soil	MDQDDLIFLGAAVLLGQMASRKPPDHTDIQAAVQTARDLRDEVNQQHEDARAKKEPKKP
Ga0307479_107995112	3300031962	Hardwood Forest Soil	MEQDDLIFLGAAVILAQMGSQRPPEHSEIKSAVSTARNLRDEVERQHEEARAKKEIKKP
Ga0307470_101564341	3300032174	Hardwood Forest Soil	MEQDDLIFLGAAVILAQMGSQRPPEHSEIKSAVSTARNLRDEVERQHEEARAKKETKKP
Ga0307471_1000669953	3300032180	Hardwood Forest Soil	MEQDDLIFLGAAVLLGQMASQRPPEQSEIKSAVSTARNLRDEVERQHEEARAKKEVKKP
Ga0307471_1022046052	3300032180	Hardwood Forest Soil	MEQDDLIYLGAAVLLGQIVMQREPDQTEIKTAVTTARNLRDEVERQHQEARAKKEIRKA
Ga0307472_1021923571	3300032205	Hardwood Forest Soil	MEQDDLIFLGAAVLLGQMVSQRPPDQSEIRAAVQAARNLRDEVNQQHEEARA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073906

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences