Metagenome / Metatranscriptome Family F073948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	46 residues
Representative Sequence	MPTVALDVPSAHVLADQASIIQDLQFVMDCCKRLLTELAKPEEDRDP
Number of Associated Samples	114
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.83 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	95.00 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.167 % of family members)
Environment Ontology (ENVO)	Unclassified (23.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.33% β-sheet: 0.00% Coil/Unstructured: 54.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF09995	MPAB_Lcp_cat	50.00
PF00248	Aldo_ket_red	7.50
PF00313	CSD	5.83
PF03729	DUF308	4.17
PF00578	AhpC-TSA	2.50
PF01927	Mut7-C	0.83
PF07730	HisKA_3	0.83
PF14226	DIOX_N	0.83
PF00009	GTP_EFTU	0.83
PF00296	Bac_luciferase	0.83
PF00534	Glycos_transf_1	0.83
PF00583	Acetyltransf_1	0.83
PF08281	Sigma70_r4_2	0.83
PF10604	Polyketide_cyc2	0.83
PF12146	Hydrolase_4	0.83
PF02518	HATPase_c	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	4.17
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.83
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.83
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.83
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.83
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.83
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.17 %
Unclassified	root	N/A	45.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.17 %
Unclassified	root	N/A	45.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.17 %
Unclassified	root	N/A	45.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.50 %
Unclassified	root	N/A	45.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.17 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	5.83 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.33 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	5.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	15.00 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	5.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.83 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	15.00 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	5.83 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	8.33 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	5.83 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	5.83 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples	5.00 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.83 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.83 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	5.83 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	5.00 %
Pseudonocardia sp. P1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. P1	0.83 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_166567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1091	Open in IMG/M
3300001356\|JGI12269J14319_10172885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. P1	887	Open in IMG/M
3300004092\|Ga0062389_102992433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300004281\|Ga0066397_10064899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	694	Open in IMG/M
3300004635\|Ga0062388_102001946	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005178\|Ga0066688_10882097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300005347\|Ga0070668_100537434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1016	Open in IMG/M
3300005437\|Ga0070710_11173284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	566	Open in IMG/M
3300005455\|Ga0070663_100857366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	782	Open in IMG/M
3300005591\|Ga0070761_10840515	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005591\|Ga0070761_10902570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300005602\|Ga0070762_10138679	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300005618\|Ga0068864_100743272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	961	Open in IMG/M
3300005764\|Ga0066903_103838342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	807	Open in IMG/M
3300006028\|Ga0070717_11528349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	605	Open in IMG/M
3300006173\|Ga0070716_100007334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5424	Open in IMG/M
3300006173\|Ga0070716_100869261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	703	Open in IMG/M
3300006174\|Ga0075014_100438687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	720	Open in IMG/M
3300006606\|Ga0074062_12877284	Not Available	513	Open in IMG/M
3300006755\|Ga0079222_11072785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300006904\|Ga0075424_101972590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	616	Open in IMG/M
3300009098\|Ga0105245_10242113	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1749	Open in IMG/M
3300009162\|Ga0075423_12765997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300009174\|Ga0105241_11463711	Not Available	656	Open in IMG/M
3300009522\|Ga0116218_1532305	Not Available	523	Open in IMG/M
3300009545\|Ga0105237_12348317	Not Available	543	Open in IMG/M
3300009672\|Ga0116215_1062553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1681	Open in IMG/M
3300009700\|Ga0116217_10146469	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300010325\|Ga0134064_10396991	Not Available	550	Open in IMG/M
3300010326\|Ga0134065_10337460	Not Available	588	Open in IMG/M
3300010361\|Ga0126378_10798477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1053	Open in IMG/M
3300010366\|Ga0126379_13069220	Not Available	559	Open in IMG/M
3300010371\|Ga0134125_11725455	Not Available	681	Open in IMG/M
3300010376\|Ga0126381_104416278	Not Available	544	Open in IMG/M
3300010379\|Ga0136449_103414737	Not Available	607	Open in IMG/M
3300010398\|Ga0126383_13291208	Not Available	528	Open in IMG/M
3300012189\|Ga0137388_11993640	Not Available	509	Open in IMG/M
3300012211\|Ga0137377_10056948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3626	Open in IMG/M
3300012356\|Ga0137371_10070529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2706	Open in IMG/M
3300012363\|Ga0137390_11150880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300012908\|Ga0157286_10319641	Not Available	575	Open in IMG/M
3300012989\|Ga0164305_12021214	Not Available	526	Open in IMG/M
3300013307\|Ga0157372_10412359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1574	Open in IMG/M
3300014164\|Ga0181532_10158242	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300014166\|Ga0134079_10245318	Not Available	772	Open in IMG/M
3300015356\|Ga0134073_10116005	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300015371\|Ga0132258_13810254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1027	Open in IMG/M
3300016404\|Ga0182037_11806148	Not Available	546	Open in IMG/M
3300017959\|Ga0187779_10793139	Not Available	646	Open in IMG/M
3300017961\|Ga0187778_11301554	Not Available	512	Open in IMG/M
3300018060\|Ga0187765_10702724	Not Available	664	Open in IMG/M
3300019879\|Ga0193723_1152849	Not Available	617	Open in IMG/M
3300020199\|Ga0179592_10412363	Not Available	588	Open in IMG/M
3300020581\|Ga0210399_11278478	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300020582\|Ga0210395_11374083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	516	Open in IMG/M
3300021168\|Ga0210406_10420057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1069	Open in IMG/M
3300021171\|Ga0210405_10245734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1416	Open in IMG/M
3300021404\|Ga0210389_10249886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1387	Open in IMG/M
3300021405\|Ga0210387_11506595	Not Available	575	Open in IMG/M
3300021406\|Ga0210386_11112281	Not Available	671	Open in IMG/M
3300021433\|Ga0210391_11551475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300021477\|Ga0210398_11099834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300021560\|Ga0126371_10175047	Not Available	2225	Open in IMG/M
3300022721\|Ga0242666_1105476	Not Available	655	Open in IMG/M
3300024222\|Ga0247691_1011853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300024251\|Ga0247679_1019955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1140	Open in IMG/M
3300025898\|Ga0207692_10169547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1264	Open in IMG/M
3300025911\|Ga0207654_10948364	Not Available	625	Open in IMG/M
3300025912\|Ga0207707_11607183	Not Available	512	Open in IMG/M
3300025914\|Ga0207671_10959791	Not Available	675	Open in IMG/M
3300025916\|Ga0207663_10311834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1179	Open in IMG/M
3300025926\|Ga0207659_11333091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	616	Open in IMG/M
3300025928\|Ga0207700_11216579	Not Available	672	Open in IMG/M
3300026088\|Ga0207641_10237798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1696	Open in IMG/M
3300027080\|Ga0208237_1028914	Not Available	837	Open in IMG/M
3300027096\|Ga0208099_1028968	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300027297\|Ga0208241_1082680	Not Available	516	Open in IMG/M
3300027310\|Ga0207983_1039743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300027725\|Ga0209178_1053337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300027911\|Ga0209698_10265371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1367	Open in IMG/M
3300028906\|Ga0308309_10904782	Not Available	766	Open in IMG/M
3300029944\|Ga0311352_10538441	Not Available	939	Open in IMG/M
3300030494\|Ga0310037_10296213	Not Available	690	Open in IMG/M
3300030520\|Ga0311372_10094207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5483	Open in IMG/M
3300030659\|Ga0316363_10404100	Not Available	530	Open in IMG/M
3300030906\|Ga0302314_11732787	Not Available	550	Open in IMG/M
3300031543\|Ga0318516_10338637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	868	Open in IMG/M
3300031546\|Ga0318538_10364080	Not Available	781	Open in IMG/M
3300031564\|Ga0318573_10147226	Not Available	1233	Open in IMG/M
3300031572\|Ga0318515_10277745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	898	Open in IMG/M
3300031573\|Ga0310915_11140454	Not Available	541	Open in IMG/M
3300031680\|Ga0318574_10333001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	884	Open in IMG/M
3300031718\|Ga0307474_10934053	Not Available	687	Open in IMG/M
3300031719\|Ga0306917_10988554	Not Available	657	Open in IMG/M
3300031747\|Ga0318502_10634987	Not Available	644	Open in IMG/M
3300031765\|Ga0318554_10280418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300031778\|Ga0318498_10052362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1814	Open in IMG/M
3300031779\|Ga0318566_10493502	Not Available	600	Open in IMG/M
3300031781\|Ga0318547_10875861	Not Available	560	Open in IMG/M
3300031781\|Ga0318547_11073546	Not Available	504	Open in IMG/M
3300031794\|Ga0318503_10087497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	982	Open in IMG/M
3300031833\|Ga0310917_10182437	Not Available	1398	Open in IMG/M
3300031854\|Ga0310904_10193951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1219	Open in IMG/M
3300031860\|Ga0318495_10153303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	1039	Open in IMG/M
3300031879\|Ga0306919_11128524	Not Available	597	Open in IMG/M
3300031896\|Ga0318551_10303817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300031896\|Ga0318551_10816036	Not Available	542	Open in IMG/M
3300031910\|Ga0306923_10419612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	1521	Open in IMG/M
3300031954\|Ga0306926_12569047	Not Available	557	Open in IMG/M
3300031981\|Ga0318531_10462224	Not Available	575	Open in IMG/M
3300032054\|Ga0318570_10514012	Not Available	546	Open in IMG/M
3300032060\|Ga0318505_10631107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300032064\|Ga0318510_10146412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	930	Open in IMG/M
3300032064\|Ga0318510_10198267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	810	Open in IMG/M
3300032782\|Ga0335082_10747556	Not Available	840	Open in IMG/M
3300032783\|Ga0335079_11512026	Not Available	663	Open in IMG/M
3300032828\|Ga0335080_12290371	Not Available	517	Open in IMG/M
3300033134\|Ga0335073_10160940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2831	Open in IMG/M
3300033134\|Ga0335073_10345921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1764	Open in IMG/M
3300033289\|Ga0310914_10759158	Not Available	867	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.33%
Host-Associated	Host-Associated	11.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.17%
Plants	Host-Associated → Plants	11.67%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.17%
Freshwater	Environmental → Aquatic → Freshwater	2.50%
Peat	Environmental → Terrestrial → Peat	2.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%
Sediment	Environmental → Aquatic → Sediment	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.83%
Loam	Environmental → Terrestrial → Soil → Loam	14.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03073470	2199352024	Soil	MPMPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLADLAKPEEERDR
JGI12269J14319_101728852	3300001356	Peatlands Soil	MPTVALDVPSAHVLADQASIIGDLQFVMDCCKRLLTELDKPEEDR
Ga0062389_1029924332	3300004092	Bog Forest Soil	MPTVALDVPSAHVLADQASIIQDLQYVMDCCKRLLAELAKPEEDRDPLMPLA
Ga0066397_100648993	3300004281	Tropical Forest Soil	MSPEVSGLTVALDLPSAQILADQAGIIQDLQFVMDCCKRLLTELAR
Ga0062388_1020019462	3300004635	Bog Forest Soil	MLTVALDTPSAHVLADQASTIQDLQFVMDCCKRLLTELAKPEEDRDPLMPVALWSS
Ga0066688_108820971	3300005178	Soil	VPEDLRVPMPTVPLDVPSAHILADQASIVQDLQFVMDCCKRLL
Ga0070668_1005374341	3300005347	Switchgrass Rhizosphere	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEE
Ga0070710_111732841	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPTVALDVPSARVLADQASIVAELQFVMDCCKRLLPELAKPEEERDQLMPLALWSS
Ga0070663_1008573661	3300005455	Corn Rhizosphere	MATSSSELPTVPLDLPSAQVLADLVATVQDLQFVMDCCKRLL
Ga0070761_108405153	3300005591	Soil	VAGTPALTVALDTPSARVLADQASIINDLQFVMDCCKRLLTELE
Ga0070761_109025702	3300005591	Soil	MLTVALDVPSARILADQASIIQDLQFVMDCCKRLLEELARPEEDRDG
Ga0070762_101386791	3300005602	Soil	MLTVALDVPSAQILADQASIIRDLQFVMDCCKRLLTELAKPEEERDPV
Ga0068864_1007432723	3300005618	Switchgrass Rhizosphere	MLTVALDLPSARALAGQASVVQDLQFVMDCCKRLLA
Ga0066903_1038383421	3300005764	Tropical Forest Soil	MTMPTVAIDVPSAHVLADQASIIAELQFVMDCCKRLLTELA
Ga0070717_115283491	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATSSSELPTVPLDLPSAQVLADLVATVQDLQFVMDCCKRLLTELARPE
Ga0070716_1000073346	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MATSSSELPTVPLDLPSAQVLADLVATVQDLQFVMDCCKRLLTELARP
Ga0070716_1008692611	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEERDPL
Ga0075014_1004386871	3300006174	Watersheds	MTMPTVALDVPSAHVLADQASIIADLQYVMDCCKRLLTELAKPEEDRDPLMP
Ga0074062_128772841	3300006606	Soil	MLTVALDLPSARVLAGQASVVQDLQFVMDCCKRLLAELDRPEEDRDG
Ga0079222_110727852	3300006755	Agricultural Soil	MPTVAIDVPSAQVLADQASIISELQFVMDCCKRLL
Ga0075424_1019725902	3300006904	Populus Rhizosphere	MPTVALDVPSARVLADQASIIAELQFVMDCCKRLLPELAKPEEERDQLMPLALW
Ga0105245_102421131	3300009098	Miscanthus Rhizosphere	MPMPTVALDVPSARVLADQASIIAELQFVMDCCKR
Ga0075423_127659972	3300009162	Populus Rhizosphere	MPMPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLTELDKP
Ga0105241_114637111	3300009174	Corn Rhizosphere	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEERDPLMP
Ga0116218_15323052	3300009522	Peatlands Soil	MPMPTVALDVPSAHVLADQASIISDLQFVMDCCKRLLTELA
Ga0105237_123483172	3300009545	Corn Rhizosphere	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEERD
Ga0116215_10625531	3300009672	Peatlands Soil	MPMPTVALDVPSAHVLADQASIISDLQFVMDCCKRLLTELAMPEEDRDP
Ga0116217_101464693	3300009700	Peatlands Soil	MTMPTVALDVPSAHVLADQASIIGDLQFVMDCCKRLLTELDKPEEDRDPLMPVALW*
Ga0134064_103969912	3300010325	Grasslands Soil	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLTELAKPEEE
Ga0134065_103374602	3300010326	Grasslands Soil	MPMPTVAIDVPSAQVLADQASIIAELKFVMDSCKRLLTELAKP
Ga0126378_107984771	3300010361	Tropical Forest Soil	MPMPTVALDVPSAHVLADQASIIAELQFVMDCCKRLLTELERPEE
Ga0126379_130692201	3300010366	Tropical Forest Soil	MTMPTVAIDVPSAHVLADQASIIAELQFVMDCCKRLLTELAKPEEERDQLMPLA
Ga0134125_117254553	3300010371	Terrestrial Soil	MATSSSELPTVPLDLPSAQVLADLVATVQDLQFVMDCCKRLLTELARPEDERDMVVPQA
Ga0126381_1044162781	3300010376	Tropical Forest Soil	MLTVALDLPSARVLAGQASVIQDLQFVMDCCKRLLAELARPEEDRD
Ga0136449_1034147371	3300010379	Peatlands Soil	MTMPTVALDVPSAHVLADQASIIQDLQFVMDCCKRLLTELAKPEEDRDPLLP
Ga0126383_132912082	3300010398	Tropical Forest Soil	MTMPTVAIDVPSAHVLADQASIIAELQFVMDCCKRLLTELAKPEEERDQLMPLALW
Ga0137388_119936401	3300012189	Vadose Zone Soil	MLTVALDLPSAQVLADQASIVSDLQFVVECCKGLLGEL
Ga0137377_100569484	3300012211	Vadose Zone Soil	MLTVALDLPSARILAGQASVIQDLQFVMDCCKRLLTELALPEEDR
Ga0137371_100705295	3300012356	Vadose Zone Soil	MLTVALDLPSAQTLADQASIIQDLQFVMDCCKRLL
Ga0137390_111508801	3300012363	Vadose Zone Soil	MLTVALDVPSAQILADQASIIADLQFVMECCKRLLTEL
Ga0157286_103196411	3300012908	Soil	MPMPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLADLAKPEEERDP
Ga0164305_120212141	3300012989	Soil	MLTVALDLPSARVLAGQASVIQDLQFVMDCCKRLLAELDRPEED
Ga0157372_104123591	3300013307	Corn Rhizosphere	MPMPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLADLAKPEEERDPL
Ga0181532_101582423	3300014164	Bog	MTMPTVALDVPSAHVLADQASIIQDLQFVMDCCKRLL
Ga0134079_102453182	3300014166	Grasslands Soil	MPMPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLTELD
Ga0134073_101160052	3300015356	Grasslands Soil	MLTVALDLPSARTLADQASIIQDLQFVMDCCKRLLTELARPEEDRDRVV
Ga0132258_138102542	3300015371	Arabidopsis Rhizosphere	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEERDP
Ga0182037_118061482	3300016404	Soil	MLTVALDMPSAHVLADQASTIQDLQFVMDCCKRLLTELAKPEEERDAVVPQA
Ga0187779_107931392	3300017959	Tropical Peatland	MAMPTVALDVPSARVLADQASIIADLQFVIDCSKQLLTELAKPDEDRDPL
Ga0187778_113015542	3300017961	Tropical Peatland	MAMPTVALDVPSARVLADQAAIIQDLQFVMDCCKRLLTEL
Ga0187765_107027242	3300018060	Tropical Peatland	MLTVALDLPSARKLAGQASVIQDLQFVMDCCKRLLAELDRPEE
Ga0193723_11528491	3300019879	Soil	MPMPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLADLAKPEEER
Ga0179592_104123632	3300020199	Vadose Zone Soil	MDAASPEAPVLTVALDMPSAHVLADQASIIQDLQFVMDCCKRLLTELALPEEDRD
Ga0210399_112784781	3300020581	Soil	MLTVALDVPSARILADQASIIQDLQFVMDCSKRLLAELARPEEDRDGVVPQ
Ga0210395_113740832	3300020582	Soil	MLTVALDLPSAQILADQASIVSDLQFVVECCKGLLGELDKPEEERDSV
Ga0210406_104200571	3300021168	Soil	MPMPTVAIDVPSAQVLADQASIIAELQFVMDCCKRLLAELA
Ga0210405_102457343	3300021171	Soil	MPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLTE
Ga0210389_102498861	3300021404	Soil	MLTVALDVPSARILADQASIIQDLQFVMDCSKRLLEELARPEEDRD
Ga0210387_115065952	3300021405	Soil	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADL
Ga0210386_111122811	3300021406	Soil	MPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLTELDKPEEERDQLMPLAL
Ga0210391_115514752	3300021433	Soil	MLTVALEVPSAQILADQASIIQDLQFVMDCCKRLL
Ga0210398_110998342	3300021477	Soil	MLTVALDLPSAQVLADQASIVSDLQFVVECCKGLLGELDKPEDERD
Ga0126371_101750473	3300021560	Tropical Forest Soil	MLTVALDLPSAQILADQAGIIQDLQFVMDCCKRLLTELAKPEEDRD
Ga0242666_11054762	3300022721	Soil	MLTVALDVPSARILADQASIIQDLQFVMDCSKRLLEELARPEEDRDGVVPQPL
Ga0247691_10118533	3300024222	Soil	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEERDPLLPLAL
Ga0247679_10199552	3300024251	Soil	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEERDPLLPL
Ga0207692_101695471	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLTELDKPEDERDQLMPL
Ga0207654_109483642	3300025911	Corn Rhizosphere	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEERDPLL
Ga0207707_116071831	3300025912	Corn Rhizosphere	MVPMPTVAIDVPSAQVLADQASIISELQFIMDCCKRLLAELDKPEEERDQ
Ga0207671_109597912	3300025914	Corn Rhizosphere	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEEERDPLMPLALW
Ga0207663_103118341	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPMPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLADLAKPEEERDQLMPL
Ga0207659_113330912	3300025926	Miscanthus Rhizosphere	MLTVALDLPSAQTLADQASIIQDLQFVMDCCKRLLTELARPEED
Ga0207700_112165792	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPMPTVALDVPSARVLADQASIIAELQFVMDCCKRLLPELAK
Ga0207641_102377981	3300026088	Switchgrass Rhizosphere	MPTVALDVPSARVLADQASIIAELQFVMDCCKRLLPELAKPEDERD
Ga0208237_10289142	3300027080	Forest Soil	MTMPTVALDVPSAHVLADQASIIADLQYVMDCCKRLLTE
Ga0208099_10289682	3300027096	Forest Soil	MLTVALDVPSARILADQASIIQDLQFVMDCSKRLLEE
Ga0208241_10826801	3300027297	Forest Soil	MTMPTVALDVPSAHVLADQASIIADLQYVMDCCKRLLTELAKPEE
Ga0207983_10397432	3300027310	Soil	MPTVALDVPSAHVLADQASTISELQFVMDCCKRLLTELAKPEEERDQLM
Ga0209178_10533373	3300027725	Agricultural Soil	MPMPTVAIDVPSAQILADQASIISELQFVMDCCKRLL
Ga0209698_102653711	3300027911	Watersheds	VPGLTVALDMPSARILADQASIIQDLQFVMDCCKRLLTELAK
Ga0308309_109047822	3300028906	Soil	MPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLVELDKPEEERDQ
Ga0311352_105384411	3300029944	Palsa	MDAASPDKPMVTVALDVPSAYVLADQAAIIQDLQFVMDGCKRLLAELAKPEEDR
Ga0310037_102962131	3300030494	Peatlands Soil	MPTVALDVPSAHVLADQASIIQDLQFVMDCCKRLLTELAKPEEDRDP
Ga0311372_100942075	3300030520	Palsa	MDAASPDKPMVTVALDVPSAYILADQAAIIQDLQFVMDGCKRLLAELAKPEEE
Ga0316363_104041002	3300030659	Peatlands Soil	MPTVALDVPSAHVLADQASIIGDLQFVMDCCKRLLT
Ga0302314_117327871	3300030906	Palsa	MDAASPDKPMVTVALDVPSAYILADQAAIIQDLQFVMDGCKRLLAELAKPE
Ga0318516_103386372	3300031543	Soil	MLTVALDMPSAHVLADQASTIQDLQFVMDCCKRLLTELARPE
Ga0318538_103640801	3300031546	Soil	MTMPTVAIDVPSARVLADQASIIAELQFVMDCCKRLLTELAKPEEER
Ga0318573_101472263	3300031564	Soil	MPTVALDVPSAHVLADQASIVSELQFVMDCCKRLLTELSAPEEERDQLMPLALWSS
Ga0318515_102777452	3300031572	Soil	MPTVALDMPSAHVLADQASTIQDLQFVMDCCKRLLTELAK
Ga0310915_111404542	3300031573	Soil	MLTVALDLPSARVLAGQASVIQDLQFVMDCCKRLLAELALPEEDRDGVVP
Ga0318574_103330012	3300031680	Soil	MVTVALDTPSALVLADQASTIQDLQFVMDCCKRLLTELAKPEEERDAVVPQALW
Ga0307474_109340531	3300031718	Hardwood Forest Soil	MPMPTVAIDVPSAHVLADQASIISELQFVMDCCKRLLADLAKPEE
Ga0306917_109885541	3300031719	Soil	MPTVALDVPSAHVLADQASIVSELQFVMDCCKRLLTELAAPEEER
Ga0318502_106349871	3300031747	Soil	MLTVALDLPSARVLAGQASVIQDLQFVMDCCKRLLTELALPE
Ga0318554_102804182	3300031765	Soil	MLTVALDLPSAQILADQAGIIQDLQFVMDCCKRLLTELAKPEEDRDGVVP
Ga0318498_100523621	3300031778	Soil	MPTVALDVPSARVLADQASIIQDLQFVMDCCKRLLAELAKPEEERDPLMP
Ga0318566_104935021	3300031779	Soil	MLTVALDLPSAQILADQAGIIQDLQFVMDCCKRLLTELAK
Ga0318547_108758612	3300031781	Soil	VRTVALDIPSARVLADQASIIQDLQFVMDCCKRLLTELAVPAEDRDTVLPLALWSS
Ga0318547_110735461	3300031781	Soil	VPMPTVALDVPSARILADQASIIQDLQFVMDCCKRLLTELE
Ga0318503_100874971	3300031794	Soil	MLTVALDMPSAHVLADQASTIQDLQFVMDCCKRLLTE
Ga0310917_101824373	3300031833	Soil	VGALTVAIDTPSARILADQASVIQDLQFVMDCCKRLLTEL
Ga0310904_101939511	3300031854	Soil	MPMPTVAIDVPSAQVLADQASIISELQFVMDCCKRLLAELAKPEEERDQLIPL
Ga0318495_101533031	3300031860	Soil	MLTVALDMPSAHVLADQASTIQDLQFVMDCCKRLLTELAKPEDERDAVVPQAL
Ga0306919_111285241	3300031879	Soil	MLTVALDLPSARVLAGQASVIQDLQFVMDCCKRLLAEL
Ga0318551_103038171	3300031896	Soil	MLTVALDLPSAQILADQAGIIQDLQFVMDCCKRLLTE
Ga0318551_108160361	3300031896	Soil	MVTVALDTPSALVLADQASTIQDLQFVMDCCKRLLTELAKPE
Ga0306923_104196122	3300031910	Soil	MLTVALDLPSAQILADQAGIIQDLQFVMDCCKRLLTEL
Ga0306926_125690471	3300031954	Soil	MLTVPLDLPSARVLAGQASVIQDLQFVMDCCKRLLTELALPEEDRD
Ga0318531_104622242	3300031981	Soil	MPTVAIDVPSAHVLADQASIIAELQFVMDCCKRILPELAKPEAEQDQ
Ga0318570_105140122	3300032054	Soil	MPTVALDVPSAHVLADQASIVSELQFVMDCCKRLLTELAAPE
Ga0318505_106311072	3300032060	Soil	MLTVALDLPSAQILADQAGIIQDLQFVMDCCKRLLTELA
Ga0318510_101464122	3300032064	Soil	MVTVALDTPSALVLADQASTIQDLQFVMDCCKRLLTELAK
Ga0318510_101982671	3300032064	Soil	MLTVALDMPSAHVLADQASTIQDLQFVMDCCKRLLTELEKPEEDR
Ga0335082_107475561	3300032782	Soil	MPMPTVALDVPSARILADQASIIQDLQFVMDSCKRLLAELEKPEEDRDPVT
Ga0335079_115120261	3300032783	Soil	MATSSSELPTVPLDLPSAQVLADLVATVQDLQFVMDCCKRLLTELDRPEAERDPVVPQ
Ga0335080_122903712	3300032828	Soil	MPTVALDVPSAHVLADQASIVSELQFVMDCCKRLLTELAEPEEERDQ
Ga0335073_101609401	3300033134	Soil	MLTVALDVTSAQILADQASIIQDLQFVMDCCKRLLTELAKSEENRDPVVPPALW
Ga0335073_103459213	3300033134	Soil	MPMPTVAIDVPSAHVLADQASIIAELQFVMDCSKRLLTELA
Ga0310914_107591581	3300033289	Soil	MLTVALDLPSARVLAGQASVIQDLQFVMDCCKRLLAELAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences