Metagenome / Metatranscriptome Family F073969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073969
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	65 residues
Representative Sequence	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEENKDD
Number of Associated Samples	92
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.17 %
% of genes near scaffold ends (potentially truncated)	27.50 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.500 % of family members)
Environment Ontology (ENVO)	Unclassified (38.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.64% β-sheet: 0.00% Coil/Unstructured: 39.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13505	OMP_b-brl	3.33
PF00072	Response_reg	2.50
PF12802	MarR_2	1.67
PF13305	TetR_C_33	1.67
PF04392	ABC_sub_bind	0.83
PF13426	PAS_9	0.83
PF07701	HNOBA	0.83
PF06411	HdeA	0.83
PF12680	SnoaL_2	0.83
PF01478	Peptidase_A24	0.83
PF00732	GMC_oxred_N	0.83
PF05199	GMC_oxred_C	0.83
PF01936	NYN	0.83
PF00890	FAD_binding_2	0.83
PF01638	HxlR	0.83
PF00239	Resolvase	0.83
PF13751	DDE_Tnp_1_6	0.83
PF13417	GST_N_3	0.83
PF08734	GYD	0.83
PF00857	Isochorismatase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.67
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.83
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.83
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.83
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.83
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
All Organisms	root	All Organisms	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
cellular organisms	root	All Organisms → cellular organisms	30.00 %
Viruses	superkingdom	All Organisms → Viruses	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.00 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.50 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.50 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.67 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.50 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.67 %
Chloroflexi bacterium RBG_16_69_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	2.50 %
Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16	0.83 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.83 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.83 %
Chloroflexi bacterium RBG_16_69_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	2.50 %
Brevundimonas phage vB_BsubS-Delta	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Brevundimonas phage vB_BsubS-Delta	0.83 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.83 %
Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Chloroflexi bacterium RBG_16_69_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	2.50 %
Acidisphaera rubrifaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	0.83 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.83 %
Brevundimonas phage vB_BsubS-Delta	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Brevundimonas phage vB_BsubS-Delta	0.83 %
Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100304110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1479	Open in IMG/M
3300003505\|JGIcombinedJ51221_10001527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5925	Open in IMG/M
3300003505\|JGIcombinedJ51221_10068770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1377	Open in IMG/M
3300004152\|Ga0062386_100407071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	1096	Open in IMG/M
3300005332\|Ga0066388_100686362	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300005332\|Ga0066388_100839617	Not Available	1506	Open in IMG/M
3300005332\|Ga0066388_101044353	Not Available	1375	Open in IMG/M
3300005434\|Ga0070709_10689389	Not Available	794	Open in IMG/M
3300005437\|Ga0070710_11057761	Not Available	594	Open in IMG/M
3300005549\|Ga0070704_101823345	Not Available	563	Open in IMG/M
3300005713\|Ga0066905_101401231	Not Available	633	Open in IMG/M
3300005764\|Ga0066903_103147672	Not Available	893	Open in IMG/M
3300005764\|Ga0066903_104236470	Not Available	767	Open in IMG/M
3300005764\|Ga0066903_106099413	Not Available	631	Open in IMG/M
3300005921\|Ga0070766_10764148	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300006050\|Ga0075028_100026161	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300006172\|Ga0075018_10435552	Not Available	673	Open in IMG/M
3300006173\|Ga0070716_100775813	Not Available	740	Open in IMG/M
3300006176\|Ga0070765_100048546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3449	Open in IMG/M
3300006893\|Ga0073928_10744445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300006893\|Ga0073928_10960633	Not Available	583	Open in IMG/M
3300007982\|Ga0102924_1207357	Not Available	844	Open in IMG/M
3300010043\|Ga0126380_11015392	Not Available	700	Open in IMG/M
3300010047\|Ga0126382_12531131	Not Available	501	Open in IMG/M
3300010048\|Ga0126373_12021920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300010048\|Ga0126373_12251523	Not Available	606	Open in IMG/M
3300010358\|Ga0126370_10793439	Not Available	843	Open in IMG/M
3300010359\|Ga0126376_11433651	Not Available	717	Open in IMG/M
3300010361\|Ga0126378_10517428	Not Available	1308	Open in IMG/M
3300010361\|Ga0126378_11016700	Not Available	932	Open in IMG/M
3300010371\|Ga0134125_12980886	Not Available	513	Open in IMG/M
3300010379\|Ga0136449_101890158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	888	Open in IMG/M
3300010398\|Ga0126383_12809081	Not Available	569	Open in IMG/M
3300010398\|Ga0126383_12887874	Not Available	561	Open in IMG/M
3300010398\|Ga0126383_13637381	Not Available	504	Open in IMG/M
3300010868\|Ga0124844_1156962	Not Available	857	Open in IMG/M
3300012948\|Ga0126375_10409044	Not Available	983	Open in IMG/M
3300012955\|Ga0164298_10803605	Not Available	673	Open in IMG/M
3300012960\|Ga0164301_10905656	Not Available	685	Open in IMG/M
3300012960\|Ga0164301_11050107	Not Available	644	Open in IMG/M
3300012971\|Ga0126369_12783452	Not Available	572	Open in IMG/M
3300012986\|Ga0164304_10231433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1227	Open in IMG/M
3300012989\|Ga0164305_10049778	All Organisms → cellular organisms → Bacteria → Proteobacteria	2444	Open in IMG/M
3300013297\|Ga0157378_11867735	Not Available	649	Open in IMG/M
3300014162\|Ga0181538_10659362	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Brevundimonas phage vB_BsubS-Delta	544	Open in IMG/M
3300015371\|Ga0132258_10949410	Not Available	2172	Open in IMG/M
3300015372\|Ga0132256_102372341	Not Available	633	Open in IMG/M
3300015374\|Ga0132255_102900082	Not Available	733	Open in IMG/M
3300016341\|Ga0182035_11023196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	733	Open in IMG/M
3300016341\|Ga0182035_11073353	Not Available	716	Open in IMG/M
3300016357\|Ga0182032_10428714	Not Available	1075	Open in IMG/M
3300016371\|Ga0182034_12011679	Not Available	511	Open in IMG/M
3300016387\|Ga0182040_10119250	Not Available	1827	Open in IMG/M
3300016404\|Ga0182037_11039510	Not Available	715	Open in IMG/M
3300016422\|Ga0182039_10932143	Not Available	776	Open in IMG/M
3300017823\|Ga0187818_10140879	Not Available	1049	Open in IMG/M
3300017924\|Ga0187820_1100038	Not Available	834	Open in IMG/M
3300017942\|Ga0187808_10389467	Not Available	636	Open in IMG/M
3300017955\|Ga0187817_10879184	Not Available	573	Open in IMG/M
3300017970\|Ga0187783_10066042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2665	Open in IMG/M
3300017970\|Ga0187783_10149797	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300017970\|Ga0187783_10675442	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300017970\|Ga0187783_10761315	Not Available	699	Open in IMG/M
3300017993\|Ga0187823_10149578	Not Available	736	Open in IMG/M
3300020579\|Ga0210407_10150418	Not Available	1794	Open in IMG/M
3300020579\|Ga0210407_10467791	Not Available	986	Open in IMG/M
3300020579\|Ga0210407_10936752	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300020580\|Ga0210403_10898359	Not Available	699	Open in IMG/M
3300020583\|Ga0210401_10228261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1720	Open in IMG/M
3300020583\|Ga0210401_10248877	All Organisms → cellular organisms → Bacteria → Proteobacteria	1637	Open in IMG/M
3300021046\|Ga0215015_10403306	Not Available	644	Open in IMG/M
3300021168\|Ga0210406_10851497	Not Available	690	Open in IMG/M
3300021171\|Ga0210405_10380954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	1112	Open in IMG/M
3300021171\|Ga0210405_10562458	All Organisms → cellular organisms → Bacteria → Proteobacteria	890	Open in IMG/M
3300021171\|Ga0210405_11057441	Not Available	609	Open in IMG/M
3300021181\|Ga0210388_11677431	Not Available	526	Open in IMG/M
3300021401\|Ga0210393_10143893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1914	Open in IMG/M
3300021405\|Ga0210387_10075796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2763	Open in IMG/M
3300021405\|Ga0210387_11573563	Not Available	560	Open in IMG/M
3300021406\|Ga0210386_11709232	Not Available	520	Open in IMG/M
3300021420\|Ga0210394_10399745	Not Available	1209	Open in IMG/M
3300021432\|Ga0210384_10539986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1049	Open in IMG/M
3300021433\|Ga0210391_11232194	Not Available	579	Open in IMG/M
3300021474\|Ga0210390_10206934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1660	Open in IMG/M
3300021474\|Ga0210390_11407319	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300021479\|Ga0210410_10191705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1830	Open in IMG/M
3300021479\|Ga0210410_11649837	Not Available	535	Open in IMG/M
3300021560\|Ga0126371_11383228	Not Available	835	Open in IMG/M
3300021560\|Ga0126371_12212536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300021560\|Ga0126371_13028886	Not Available	569	Open in IMG/M
3300022712\|Ga0242653_1033242	Not Available	781	Open in IMG/M
3300025898\|Ga0207692_10235939	Not Available	1090	Open in IMG/M
3300025928\|Ga0207700_12045698	Not Available	500	Open in IMG/M
3300026984\|Ga0208732_1013719	Not Available	693	Open in IMG/M
3300027065\|Ga0208489_1010490	Not Available	571	Open in IMG/M
3300027069\|Ga0208859_1012786	Not Available	930	Open in IMG/M
3300027069\|Ga0208859_1037873	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300027895\|Ga0209624_10835073	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300027908\|Ga0209006_10469586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16	1052	Open in IMG/M
3300027908\|Ga0209006_10794049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14	768	Open in IMG/M
3300027911\|Ga0209698_10366127	Not Available	1131	Open in IMG/M
3300029636\|Ga0222749_10661902	Not Available	571	Open in IMG/M
3300031057\|Ga0170834_105101023	Not Available	588	Open in IMG/M
3300031572\|Ga0318515_10344900	Not Available	799	Open in IMG/M
3300031573\|Ga0310915_10230837	Not Available	1300	Open in IMG/M
3300031708\|Ga0310686_115868336	Not Available	2356	Open in IMG/M
3300031719\|Ga0306917_10657792	Not Available	824	Open in IMG/M
3300031781\|Ga0318547_10498925	Not Available	752	Open in IMG/M
3300031819\|Ga0318568_10865061	Not Available	560	Open in IMG/M
3300031833\|Ga0310917_10033421	Not Available	3059	Open in IMG/M
3300031879\|Ga0306919_10336700	Not Available	1151	Open in IMG/M
3300031890\|Ga0306925_11920328	Not Available	562	Open in IMG/M
3300031945\|Ga0310913_10385430	Not Available	994	Open in IMG/M
3300031946\|Ga0310910_11119172	Not Available	613	Open in IMG/M
3300031947\|Ga0310909_10756752	Not Available	805	Open in IMG/M
3300032064\|Ga0318510_10263607	Not Available	711	Open in IMG/M
3300032076\|Ga0306924_10320789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	1777	Open in IMG/M
3300032076\|Ga0306924_11134994	Not Available	850	Open in IMG/M
3300032160\|Ga0311301_10066452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7730	Open in IMG/M
3300032261\|Ga0306920_103569135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.67%
Host-Associated	Host-Associated	3.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.83%
Aquatic	Environmental → Aquatic	10.83%
Plants	Host-Associated → Plants	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.83%
Freshwater	Environmental → Aquatic → Freshwater	5.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.50%
Sediment	Environmental → Aquatic → Sediment	2.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.83%
Loam	Environmental → Terrestrial → Soil → Loam	21.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.33%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.33%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.17%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.33%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027065	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF006 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1003041102	3300002245	Forest Soil	MTTTMEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYGSPEDNKED*
JGIcombinedJ51221_100015275	3300003505	Forest Soil	MTTTTIDVSEALERVDNIVNTLDEXCDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD*
JGIcombinedJ51221_100687702	3300003505	Forest Soil	MTRTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEGPEESKDD*
Ga0062386_1004070712	3300004152	Bog Forest Soil	MTTTTEVSDSLERVDSVINMLDEICDHTDGFLSAEEAWLSSITETLRTWRYVMQETYEGPDESKDD*
Ga0066388_1006863623	3300005332	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEENKDD*
Ga0066388_1008396174	3300005332	Tropical Forest Soil	MTTTEVSDSLERVGNVINMLDEIIDHMDGFSSAEEAWLSSSTETLRTWRYVMQETYESPDDNKDD*
Ga0066388_1010443531	3300005332	Tropical Forest Soil	MTTTMEVSETLERVENIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQESYESPEDNKDD*
Ga0070709_106893892	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMHETYESAEESKDD*
Ga0070710_110577612	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VHFFSRGELDKMTTAVSDSLERVDNIINVLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEDNKDD*
Ga0070704_1018233452	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LDKMTTAVSDSLERVDNIINVLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD*
Ga0066905_1014012312	3300005713	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYASAEE
Ga0066903_1031476721	3300005764	Tropical Forest Soil	MTTTEVSDSLERVDNIIKMLDEIIDDMEGFSSAEEAWLSSITETLRSWRYVMHETYESPEDNRDD*
Ga0066903_1042364703	3300005764	Tropical Forest Soil	MTTTEITDTLKSLGDIISTLDEIMDNMDGFSSAEEAWLSSITETLRTWRFVMHETYGNPEDSKDD*
Ga0066903_1060994132	3300005764	Tropical Forest Soil	MTTTETLERVDNIINMLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEENKED*
Ga0070766_107641482	3300005921	Soil	MTTTMEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRNWRYVMQEIYGSPEDNKED*
Ga0075028_1000261614	3300006050	Watersheds	MTTTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMHETYEGPEESKDD*
Ga0075018_104355522	3300006172	Watersheds	MTTTMEVSETLERVYNIVNTLDEICDHMDGFSSAEEAWLSSITETLRTSRYVM
Ga0070716_1007758131	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTTIDVSEALERVDNIVNTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQE
Ga0070765_1000485463	3300006176	Soil	MTTTTIDVSEALERVDNIVNTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD*
Ga0073928_107444452	3300006893	Iron-Sulfur Acid Spring	MTTTTEVSDSLERVDNIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAENNKDA*
Ga0073928_109606332	3300006893	Iron-Sulfur Acid Spring	MTTTELFDSLERIDNIIKMLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMHETYESPEEIKDD*
Ga0102924_12073572	3300007982	Iron-Sulfur Acid Spring	VDNIINMLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMHETYESPENDKDD*
Ga0126380_110153922	3300010043	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYASAEENKDD*
Ga0126382_125311311	3300010047	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDETCDHMDGFSSTEEAWLSSITETLRTWLYVMQETYASAEENKDD*
Ga0126373_120219202	3300010048	Tropical Forest Soil	MTTTMEVSETLERVENIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAGDN
Ga0126373_122515231	3300010048	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSNEEAWLSSITETLRTWRYVMQETYASAEENKDD*
Ga0126370_107934392	3300010358	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQET
Ga0126376_114336512	3300010359	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEKR*
Ga0126378_105174282	3300010361	Tropical Forest Soil	MTTTEVSDSLERVGNVINMLDEIIDHMDGFSSAEEAWLSSSTETLLTWRYVMQETYESPEDNKDD*
Ga0126378_110167002	3300010361	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDETCDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEENKDD*
Ga0134125_129808861	3300010371	Terrestrial Soil	MTTTMEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPENKKDD*
Ga0136449_1018901581	3300010379	Peatlands Soil	VGDDERFDNIVNMLDEICDHLDGFSSAEEAWLSSITEALRTWRYVMQETYEGPEDNKDD*
Ga0126383_128090812	3300010398	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQ
Ga0126383_128878742	3300010398	Tropical Forest Soil	VDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYQSAEENKDD*
Ga0126383_136373812	3300010398	Tropical Forest Soil	VHLFSSEELGEMTTTEVSHSLERVDNIIKMLDEIMDDMEGFSSAEEAWLSSITETLRTWSYVMHETYESPEDNRDD*
Ga0124844_11569623	3300010868	Tropical Forest Soil	MLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEENKDD*
Ga0126375_104090442	3300012948	Tropical Forest Soil	MTTTIEVSETLEQVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYQSAEENKDD*
Ga0164298_108036052	3300012955	Soil	LSLYLQSCRELEKMTTTTIDVSEALERVDNIVNTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD*
Ga0164301_109056562	3300012960	Soil	MTTTMEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD*
Ga0164301_110501072	3300012960	Soil	MTTTTEVSDSLDRVESIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYE
Ga0126369_127834522	3300012971	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAGENKDD*
Ga0164304_102314332	3300012986	Soil	MTTTTEVADLLERVDNIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEVSSDIQN*
Ga0164305_100497783	3300012989	Soil	LSLYLQSCRELEKMTTTTMDVSEALERVDNIVNTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD*
Ga0157378_118677351	3300013297	Miscanthus Rhizosphere	MTTTTEVFDSLERVDSIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYE
Ga0181538_106593621	3300014162	Bog	MTRTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEG
Ga0132258_109494103	3300015371	Arabidopsis Rhizosphere	MTATMEVSETLERVEHIVNALHEICDHMDGFSSAEEAWLSSITETLRTWRYVMQEAYESAADKND*
Ga0132256_1023723411	3300015372	Arabidopsis Rhizosphere	MTATMEVSETLERVEHIVNALHEICDHMDGFSSAEEAWLSSITETLRTWRYVMQEAY
Ga0132255_1029000822	3300015374	Arabidopsis Rhizosphere	LKMTATMEVSETLERVEHIVNALDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQEAYESAADKND*
Ga0182035_110231962	3300016341	Soil	MTTTMEVSETLEGVDNIINMLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMRETYESPAENKED
Ga0182035_110733532	3300016341	Soil	FSRGKLEKMTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAKENKDD
Ga0182032_104287142	3300016357	Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSVEEAWLSSITETLRTWRYVMQETYESAEEN
Ga0182034_120116791	3300016371	Soil	MTMTEVSHSLERVDNIIRMLDEIMDDMEGFSSAEEAWLSSITETLRTWRYVMHETYESPEDNIDD
Ga0182040_101192504	3300016387	Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYASAEENKDD
Ga0182037_110395102	3300016404	Soil	MMTTEVSDSLERVDNIINMLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEENKEN
Ga0182039_109321431	3300016422	Soil	MTTTIEVSEPLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEENKDD
Ga0187818_101408791	3300017823	Freshwater Sediment	MTTMTDVSDTVERVDNIINMLDEIMDHMEGFSSAEEAWLSSITKTLRTWRYVMQETYESPEDNKDD
Ga0187820_11000382	3300017924	Freshwater Sediment	MTTTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEGPEESKDD
Ga0187808_103894671	3300017942	Freshwater Sediment	MTTTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLLTWRYVM
Ga0187817_108791841	3300017955	Freshwater Sediment	MTTTTEVSDSLERVDSIINTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEGPEESKDD
Ga0187783_100660423	3300017970	Tropical Peatland	MTITEVSDSLDRVDNIINMLDEIMDHMDGFSSAEEAWLSSITETLRTWRHVMQETYESPDDNRDG
Ga0187783_101497971	3300017970	Tropical Peatland	MATIDVSEVLERVDNIVNMLDEICDDMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEGNKD
Ga0187783_106754423	3300017970	Tropical Peatland	MATTDVSEALERVDKIVNMLDEICDEMDGFSSAEEAWLSSITETLRTWRYVMQETYQ
Ga0187783_107613152	3300017970	Tropical Peatland	MTTTTAVSETLERVDSIINTLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEENTED
Ga0187823_101495782	3300017993	Freshwater Sediment	MTRTTEVSDSLERVDNIVNMLDEICDHTDGFSSAEEAWLSSITETLRTWRYVMQETYGSPEDNKED
Ga0210407_101504181	3300020579	Soil	MTTTTIDVSEALERVDNIVNTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD
Ga0210407_104677911	3300020579	Soil	MTTTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMHETYEGPEESKDD
Ga0210407_109367521	3300020579	Soil	MTTTMEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPENKKDD
Ga0210403_108983591	3300020580	Soil	MTTTTEVADLLERVDNIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQE
Ga0210401_102282611	3300020583	Soil	MTTTTEVSDSLDRVESIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEG
Ga0210401_102488772	3300020583	Soil	MTTTTEVADLLERVDNIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEVSSDIQN
Ga0215015_104033061	3300021046	Soil	MTTTEISDSLERIDNIINMLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMHETYESPEVSAETAT
Ga0210406_108514971	3300021168	Soil	MTTTTEVADLLERVDNIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETY
Ga0210405_103809541	3300021171	Soil	MTRTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEGPEESKDD
Ga0210405_105624582	3300021171	Soil	MATIDVSEALQRVDNIVNMLDEICDDMDGFSSAEEAWLSSITETLRTWRYVMQETYESSEDNKDE
Ga0210405_110574411	3300021171	Soil	MTTTEISDSLERIDNIINTLDKIMDQMDGFSSAEEAWLSSITETLRTWRYVMHETYESSEENNED
Ga0210388_116774311	3300021181	Soil	MTTTTIDVSEALERVDNIVNTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAED
Ga0210393_101438931	3300021401	Soil	EGELERMTTTTEVADLLERVDNIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEVSSDIQN
Ga0210387_100757962	3300021405	Soil	MTTTTMDVSEALERVDNIVNTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD
Ga0210387_115735632	3300021405	Soil	MTMTTEVSDSLERVDSIISMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD
Ga0210386_117092321	3300021406	Soil	PLVGCTFLKWELGKMTTTEVSDSLERVDNLINMLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMHETYESLEDSKRD
Ga0210394_103997451	3300021420	Soil	MTTTTEVSDSLDRVESIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEGSEESKYD
Ga0210384_105399862	3300021432	Soil	MTRTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMHETYEGSADKRGD
Ga0210391_112321941	3300021433	Soil	MTMTTEVSDSLERVDSIISMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMHETYEGPEESKDD
Ga0210390_102069342	3300021474	Soil	MTTTTEVSDSLDRVESIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEVSSDIQN
Ga0210390_114073191	3300021474	Soil	MTTTIEVSETLERVDNIVNMLDEICDDMDGFSSAEEAWLSSITETLRTWRYVMQETYESSEDNKDE
Ga0210410_101917051	3300021479	Soil	MTTTTEVADLLERADNIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEVSSDIQN
Ga0210410_116498372	3300021479	Soil	MTTTTEVSDSLERVDSIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEGPERRGSVMRRPRAALI
Ga0126371_113832282	3300021560	Tropical Forest Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYQSAEENKDD
Ga0126371_122125361	3300021560	Tropical Forest Soil	MTTTMEVSETLERVENIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMHETYESAEGNKDD
Ga0126371_130288861	3300021560	Tropical Forest Soil	MTTTETLERVDNIINMLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEENKED
Ga0242653_10332422	3300022712	Soil	LERVDNIVNTLDEVCDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD
Ga0207692_102359392	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTTEVFDSLERVDSIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPENKKDD
Ga0207700_120456981	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HGYRATRRRTFSQEGELERMTTTTEVADLLERVDNIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEVSSDIQN
Ga0208732_10137191	3300026984	Forest Soil	MTTTTIDVSEALERVDNIVNTLDEVCDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD
Ga0208489_10104901	3300027065	Forest Soil	MTTTTEVADLLERVDNIINMLDEICDHMDGFSSAEEAWHSSITETLRTWRYVMQETYESPEVSSDIQN
Ga0208859_10127862	3300027069	Forest Soil	MTTTMEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESAEDKRGD
Ga0208859_10378731	3300027069	Forest Soil	TEVADLLERVDNIINMLDEICDHMDGFSSAEEAWHSSITETLRTWRYVMQETYESPEVSSDIQN
Ga0209624_108350731	3300027895	Forest Soil	MTTTMEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYGSPEDNKED
Ga0209006_104695862	3300027908	Forest Soil	MTTTMEVSETLERVDNIVNMLDEICDHMDGFSSAEEAWLSSITETLRNWRYVMQEIYGSPEDNKED
Ga0209006_107940491	3300027908	Forest Soil	MTRTTEVSDSLERVDGIVNMLDEICDHIDGFSSAEEAWLSSISETLRTWRYVMH
Ga0209698_103661271	3300027911	Watersheds	MTTAEVSDSLERVDNIINVLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMQETYESPEGNKDD
Ga0222749_106619021	3300029636	Soil	MTTTTEVSDSLDRVESIINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEGSEESKDD
Ga0170834_1051010231	3300031057	Forest Soil	MTTTTEVSDSLDRVDSIINTLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMHETYEGPEESKDD
Ga0318515_103449001	3300031572	Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESPEGDKDN
Ga0310915_102308371	3300031573	Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEEN
Ga0310686_1158683364	3300031708	Soil	MTTTTEVSDSLERVDSIVNMLDEICDNMDGFSSAEEAWLSSITETLRIWRYVMRETYESPEDSKDD
Ga0306917_106577921	3300031719	Soil	MTTTDVSDALERVDNIINMLDEICDHMDGFSSVEEAWLSSITETLRTWRYVMQE
Ga0318547_104989252	3300031781	Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEENKDD
Ga0318568_108650611	3300031819	Soil	LERVDSIANMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAKENKDD
Ga0310917_100334215	3300031833	Soil	MTTTIEVSETLERVDSIVMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYASAEENKDD
Ga0306919_103367002	3300031879	Soil	MTTTIEVSETLERVDSIVNMLDEICDHTDGFSSVEEAWLSSITETLRTWRYVMQETYESAEEN
Ga0306925_119203282	3300031890	Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSVEEAWLSSITETLRTWRYVMQETYESAGENKDD
Ga0310913_103854301	3300031945	Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEENKD
Ga0310910_111191721	3300031946	Soil	MTTTIEVSETLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAKENKDD
Ga0310909_107567522	3300031947	Soil	MTTTIEVSETLERVDSIVKMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEENKDD
Ga0318510_102636072	3300032064	Soil	MTTTIEVSEPLERVDSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYASAEENKDD
Ga0306924_103207894	3300032076	Soil	MTTTIEVSETLERADSIVNMLDEICDHMDGFSSTEEAWLSSITETLRTWRYVMQETYESAEEN
Ga0306924_111349942	3300032076	Soil	MTTTIEVSEPLERVDGIVNMLDEICDHMDGFSSVEEAWLSSITEPLRTWRYVMQETYESAGENKDDWQLSFAGATATRTS
Ga0311301_1006645210	3300032160	Peatlands Soil	MTTTTEVSDSLERVDSVINMLDEICDHMDGFSSAEEAWLSSITETLRTWRYVMQETYEGPEESKDD
Ga0306920_1035691352	3300032261	Soil	LERVDSIINTLDEIMDHMDGFSSAEEAWLSSITETLRTWRYVMQETHESAEENTED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences