Metagenome / Metatranscriptome Family F074046

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074046
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	71 residues
Representative Sequence	MSEYSGCDDFKPLMVSHKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEAFKKRGYTRKQINELWEQSHK
Number of Associated Samples	91
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.00 %
% of genes near scaffold ends (potentially truncated)	18.33 %
% of genes from short scaffolds (< 2000 bps)	70.00 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (36.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (43.333 % of family members)
Environment Ontology (ENVO)	Unclassified (86.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (78.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.53% β-sheet: 10.20% Coil/Unstructured: 63.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00156	Pribosyltran	32.50
PF14489	QueF	9.17
PF01048	PNP_UDP_1	7.50
PF00438	S-AdoMet_synt_N	5.83
PF02772	S-AdoMet_synt_M	4.17
PF10262	Rdx	1.67
PF00535	Glycos_transf_2	1.67
PF16363	GDP_Man_Dehyd	1.67
PF02826	2-Hacid_dh_C	1.67
PF03102	NeuB	1.67
PF02773	S-AdoMet_synt_C	1.67
PF01370	Epimerase	1.67
PF00120	Gln-synt_C	0.83
PF01555	N6_N4_Mtase	0.83
PF04765	DUF616	0.83
PF01242	PTPS	0.83
PF02350	Epimerase_2	0.83
PF05838	Glyco_hydro_108	0.83
PF03721	UDPG_MGDP_dh_N	0.83
PF11655	DUF2589	0.83
PF00565	SNase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	11.67
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	7.50
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	7.50
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	7.50
COG2089	Sialic acid synthase SpsE, contains C-terminal SAF domain	Cell wall/membrane/envelope biogenesis [M]	1.67
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.83
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.83
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.83
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.83
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.83
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.83
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.83
COG3926	Lysozyme family protein	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.50 %
Unclassified	root	N/A	32.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	38.33 %
Unclassified	root	N/A	32.50 %
Viruses	superkingdom	All Organisms → Viruses	29.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.67 %
Unclassified	root	N/A	32.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.17 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.17 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	13.33 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.17 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	13.33 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.17 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	13.33 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001683\|GBIDBA_10150440	Not Available	579	Open in IMG/M
3300002514\|JGI25133J35611_10211474	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300002518\|JGI25134J35505_10096315	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300003542\|FS900DNA_11003400	Not Available	504	Open in IMG/M
3300003937\|Ga0063391_1005971	Not Available	37759	Open in IMG/M
3300005398\|Ga0066858_10229550	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	532	Open in IMG/M
3300005426\|Ga0066847_10038911	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300005430\|Ga0066849_10000468	All Organisms → cellular organisms → Bacteria	16366	Open in IMG/M
3300005521\|Ga0066862_10137176	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005551\|Ga0066843_10201943	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	558	Open in IMG/M
3300005596\|Ga0066834_10073081	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300005603\|Ga0066853_10137327	Not Available	825	Open in IMG/M
3300005969\|Ga0066369_10037384	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300006090\|Ga0082015_1006762	All Organisms → Viruses → Predicted Viral	2007	Open in IMG/M
3300006164\|Ga0075441_10022683	All Organisms → Viruses → Predicted Viral	2582	Open in IMG/M
3300006165\|Ga0075443_10003584	All Organisms → cellular organisms → Bacteria	5854	Open in IMG/M
3300006166\|Ga0066836_10935126	Not Available	523	Open in IMG/M
3300006308\|Ga0068470_1226489	Not Available	1295	Open in IMG/M
3300006308\|Ga0068470_1453245	All Organisms → Viruses → Predicted Viral	1355	Open in IMG/M
3300006310\|Ga0068471_1080763	All Organisms → Viruses → Predicted Viral	3500	Open in IMG/M
3300006310\|Ga0068471_1315840	All Organisms → Viruses → Predicted Viral	2304	Open in IMG/M
3300006310\|Ga0068471_1421847	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300006315\|Ga0068487_1153336	Not Available	686	Open in IMG/M
3300006340\|Ga0068503_10358020	Not Available	707	Open in IMG/M
3300006340\|Ga0068503_10613618	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1149	Open in IMG/M
3300006478\|Ga0100224_1083256	Not Available	583	Open in IMG/M
3300006565\|Ga0100228_1023096	All Organisms → cellular organisms → Bacteria	5051	Open in IMG/M
3300006565\|Ga0100228_1023652	All Organisms → cellular organisms → Bacteria	6153	Open in IMG/M
3300006565\|Ga0100228_1034200	All Organisms → cellular organisms → Bacteria	2500	Open in IMG/M
3300006565\|Ga0100228_1232791	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006738\|Ga0098035_1010331	All Organisms → Viruses → Predicted Viral	3838	Open in IMG/M
3300006738\|Ga0098035_1133862	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	849	Open in IMG/M
3300006750\|Ga0098058_1157005	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	600	Open in IMG/M
3300006751\|Ga0098040_1012628	Not Available	2866	Open in IMG/M
3300006751\|Ga0098040_1018274	All Organisms → Viruses → Predicted Viral	2311	Open in IMG/M
3300006751\|Ga0098040_1034853	All Organisms → Viruses → Predicted Viral	1599	Open in IMG/M
3300006754\|Ga0098044_1271554	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300006793\|Ga0098055_1245302	Not Available	674	Open in IMG/M
3300006793\|Ga0098055_1303522	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006900\|Ga0066376_10152154	All Organisms → Viruses → Predicted Viral	1411	Open in IMG/M
3300006902\|Ga0066372_10068824	All Organisms → Viruses → Predicted Viral	1765	Open in IMG/M
3300006923\|Ga0098053_1068784	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	722	Open in IMG/M
3300006927\|Ga0098034_1087363	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	898	Open in IMG/M
3300007758\|Ga0105668_1058503	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300009103\|Ga0117901_1150302	All Organisms → Viruses → Predicted Viral	1301	Open in IMG/M
3300009104\|Ga0117902_1350514	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300009173\|Ga0114996_10543913	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	870	Open in IMG/M
3300009173\|Ga0114996_10690179	Not Available	749	Open in IMG/M
3300009409\|Ga0114993_10259505	All Organisms → Viruses → Predicted Viral	1330	Open in IMG/M
3300009425\|Ga0114997_10372125	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	777	Open in IMG/M
3300009481\|Ga0114932_10006739	All Organisms → cellular organisms → Bacteria	9692	Open in IMG/M
3300009481\|Ga0114932_10010232	Not Available	7262	Open in IMG/M
3300009786\|Ga0114999_10992307	Not Available	608	Open in IMG/M
3300010151\|Ga0098061_1150333	Not Available	844	Open in IMG/M
3300010151\|Ga0098061_1227864	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	654	Open in IMG/M
3300012950\|Ga0163108_10082942	All Organisms → Viruses → Predicted Viral	2039	Open in IMG/M
3300017775\|Ga0181432_1099285	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	866	Open in IMG/M
3300020312\|Ga0211542_1035778	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300020332\|Ga0211502_1082864	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	608	Open in IMG/M
3300020353\|Ga0211613_1138001	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	578	Open in IMG/M
3300020361\|Ga0211531_1047035	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300020373\|Ga0211660_10164473	Not Available	787	Open in IMG/M
3300020407\|Ga0211575_10160322	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	937	Open in IMG/M
3300020411\|Ga0211587_10011249	All Organisms → Viruses → Predicted Viral	4777	Open in IMG/M
3300020415\|Ga0211553_10127485	All Organisms → Viruses → Predicted Viral	1049	Open in IMG/M
3300020423\|Ga0211525_10180817	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300020444\|Ga0211578_10463409	Not Available	531	Open in IMG/M
3300020453\|Ga0211550_10207491	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300020470\|Ga0211543_10365606	Not Available	695	Open in IMG/M
3300020470\|Ga0211543_10552546	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	544	Open in IMG/M
3300020471\|Ga0211614_10538436	Not Available	518	Open in IMG/M
3300020477\|Ga0211585_10448484	Not Available	738	Open in IMG/M
3300020478\|Ga0211503_10207755	All Organisms → Viruses → Predicted Viral	1099	Open in IMG/M
3300020478\|Ga0211503_10337966	Not Available	817	Open in IMG/M
3300021084\|Ga0206678_10113646	All Organisms → Viruses → Predicted Viral	1391	Open in IMG/M
3300021087\|Ga0206683_10531103	Not Available	576	Open in IMG/M
3300021352\|Ga0206680_10395084	Not Available	537	Open in IMG/M
3300021442\|Ga0206685_10005172	All Organisms → Viruses → Predicted Viral	4007	Open in IMG/M
3300021791\|Ga0226832_10002285	Not Available	6026	Open in IMG/M
3300021791\|Ga0226832_10063265	All Organisms → Viruses → Predicted Viral	1297	Open in IMG/M
3300021791\|Ga0226832_10463811	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	541	Open in IMG/M
3300022227\|Ga0187827_10057159	All Organisms → Viruses → Predicted Viral	3091	Open in IMG/M
(restricted) 3300024259\|Ga0233437_1394559	Not Available	505	Open in IMG/M
3300024344\|Ga0209992_10045161	All Organisms → Viruses → Predicted Viral	2138	Open in IMG/M
3300025066\|Ga0208012_1031802	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300025096\|Ga0208011_1009050	All Organisms → Viruses → Predicted Viral	2830	Open in IMG/M
3300025096\|Ga0208011_1023555	All Organisms → Viruses → Predicted Viral	1562	Open in IMG/M
3300025096\|Ga0208011_1036749	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300025114\|Ga0208433_1015287	All Organisms → Viruses → Predicted Viral	2227	Open in IMG/M
3300025118\|Ga0208790_1010987	All Organisms → Viruses → Predicted Viral	3280	Open in IMG/M
3300025125\|Ga0209644_1062711	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	860	Open in IMG/M
3300025131\|Ga0209128_1003487	Not Available	9627	Open in IMG/M
3300026260\|Ga0208408_1022159	All Organisms → Viruses → Predicted Viral	2392	Open in IMG/M
3300026269\|Ga0208766_1119386	Not Available	710	Open in IMG/M
3300026321\|Ga0208764_10036687	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300027685\|Ga0209554_1115284	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	862	Open in IMG/M
3300027685\|Ga0209554_1155463	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300027714\|Ga0209815_1059161	All Organisms → Viruses → Predicted Viral	1363	Open in IMG/M
3300027779\|Ga0209709_10086464	Not Available	1683	Open in IMG/M
3300027838\|Ga0209089_10043530	All Organisms → Viruses → Predicted Viral	2943	Open in IMG/M
3300027838\|Ga0209089_10141378	All Organisms → Viruses → Predicted Viral	1454	Open in IMG/M
3300027838\|Ga0209089_10311246	Not Available	895	Open in IMG/M
3300027839\|Ga0209403_10124173	All Organisms → Viruses → Predicted Viral	1653	Open in IMG/M
3300027844\|Ga0209501_10027156	All Organisms → Viruses → Predicted Viral	4381	Open in IMG/M
3300028192\|Ga0257107_1009760	All Organisms → Viruses → Predicted Viral	3164	Open in IMG/M
3300029319\|Ga0183748_1002269	Not Available	10730	Open in IMG/M
3300031675\|Ga0302122_10274777	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	603	Open in IMG/M
3300031861\|Ga0315319_10446594	Not Available	648	Open in IMG/M
3300031886\|Ga0315318_10561831	Not Available	648	Open in IMG/M
3300031886\|Ga0315318_10634950	Not Available	603	Open in IMG/M
3300032006\|Ga0310344_10353030	All Organisms → Viruses → Predicted Viral	1260	Open in IMG/M
3300032006\|Ga0310344_10597168	All Organisms → cellular organisms → Bacteria → Proteobacteria	945	Open in IMG/M
3300032032\|Ga0315327_10001620	Not Available	11759	Open in IMG/M
3300032048\|Ga0315329_10129645	Not Available	1299	Open in IMG/M
3300032048\|Ga0315329_10720415	Not Available	526	Open in IMG/M
3300032138\|Ga0315338_1006692	Not Available	7697	Open in IMG/M
3300032138\|Ga0315338_1007605	Not Available	6885	Open in IMG/M
3300032138\|Ga0315338_1025134	All Organisms → Viruses → Predicted Viral	2682	Open in IMG/M
3300032138\|Ga0315338_1031254	All Organisms → Viruses → Predicted Viral	2285	Open in IMG/M
3300034695\|Ga0372840_101869	Not Available	856	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	60.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.50%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.67%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	4.17%
Volcanic	Environmental → Aquatic → Marine → Volcanic	2.50%
Coastal	Environmental → Aquatic → Marine → Coastal	1.67%
Inlet	Environmental → Aquatic → Marine → Inlet	0.83%
Strait	Environmental → Aquatic → Marine → Strait	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	47.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.50%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.67%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	8.33%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	5.00%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	3.33%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	43.33%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	17.50%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	11.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	7.50%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	4.17%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.33%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	2.50%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	2.50%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.83%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.83%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.83%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.83%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.83%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.83%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300003542	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA	Environmental	Open in IMG/M
3300003937	SPOT_150m_metagenome_year	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental	Open in IMG/M
3300005551	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A	Environmental	Open in IMG/M
3300005596	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006315	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006478	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0125m	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300009103	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020312	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)	Environmental	Open in IMG/M
3300020332	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX555956-ERR598975)	Environmental	Open in IMG/M
3300020353	Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX556093-ERR598998)	Environmental	Open in IMG/M
3300020361	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)	Environmental	Open in IMG/M
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental	Open in IMG/M
3300020407	Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020415	Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)	Environmental	Open in IMG/M
3300020423	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)	Environmental	Open in IMG/M
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental	Open in IMG/M
3300020453	Marine microbial communities from Tara Oceans - TARA_B100001758 (ERX556003-ERR598963)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020477	Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300024259 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MG	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027839	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300031675	Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCM	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032138	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GBIDBA_101504402	3300001683	Hydrothermal Vent Plume	VSEYSGCDDFTPMIRSYKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSEVFKKRRYSRKQINEVWEQSHTGE*
JGI25133J35611_102114742	3300002514	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDEYGRXPNXSDVPMTYMTRSEVFKKRGYSRKDINELWKERHKNEL*
JGI25134J35505_100963152	3300002518	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHKNEL*
FS900DNA_110034001	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	VSEYSGCDNFTPLRRSYKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSEAYKKQRLNKKEINLLYGKDQKTIIIDGC*
Ga0063391_10059718	3300003937	Marine	MSEYSGCDDFTPIRRSYKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRAKGE*
Ga0066858_102295501	3300005398	Marine	MSEYSGCDDFRPLMISHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHNQYE*
Ga0066847_100389112	3300005426	Marine	MSEYSGCDDFRPLMISHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHKNEL*
Ga0066849_1000046819	3300005430	Marine	MSEYQGCDDFTPLTRSYKRAWFEEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGYNRNQINKLWEERNKNEL*
Ga0066862_101371762	3300005521	Marine	MSEYEGCDDFKPLMKSHKKEWFGEKLFVDEYGRAPNLSDVPMTFMTRSEVFKKRGYTRKQINELWNGKHND*
Ga0066843_102019432	3300005551	Marine	MSEYSGCDDFRPLMISHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHNQYE
Ga0066834_100730813	3300005596	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDMYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRHKE*
Ga0066853_101373272	3300005603	Marine	YSGCDDFRPLMVSHKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRHKE*
Ga0066369_100373843	3300005969	Marine	MSEYAGCNDFTPLMKSYKRAWFGEKLFVDMYGRVPNLSDVPMTYMTRSEVFKKRGLTRKGINKLWEQRSEK*
Ga0082015_10067623	3300006090	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHNQYE*
Ga0075441_100226833	3300006164	Marine	MSEYAGCDDFTPLMKSYKRSWFGEKLFVDEYGRAPNLSDVPMTYMTRSKVFKKRGLTRKQINELWNKRRLK*
Ga0075443_100035848	3300006165	Marine	MSEYAGCDDFTPLMKSYKKAWFGEKLFVDEFGRAPNLSDVPMTYMTRSQVFKKRGYTRKQINELWKGVKNER*
Ga0066836_109351262	3300006166	Marine	MSEYQGCDDFTPIMKSYKRAWFEEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGYNRNQINKLWEERNKNEL*
Ga0068470_12264893	3300006308	Marine	MSEYAGCDDFTPLIRSYKRAWFNEKLFVDTYGRAPNLSDVPMTYMTRSKVFKKRGYSRKQINELWDKE*
Ga0068470_14532453	3300006308	Marine	MSEYAGCDDFTPLMTSYKKAWFGEKLFVDMYGREPNLSDVPMTYMTRSEAFKKRGFSRKKINKLWEQSHNGE*
Ga0068471_10807638	3300006310	Marine	MSEYAGCDDFTPLMTSYKKAWFGEKLFVDMYGREPNLSDVPMTYMTRSEAFKKRGFSRKKINKLWEQSHKQ*
Ga0068471_13158402	3300006310	Marine	MSEYVGCDDFTPLRRSYKRSWFQEKLFVDIYGRAPNLSDVPMTYMTRSKVFKKRGYSRKQINELWDKE*
Ga0068471_14218471	3300006310	Marine	TPLIRSYKRAWFNEKLFVDTYGRAPNLSDVPMTYMTRSKVFKKRGYSRKQINELWERNHKNEL*
Ga0068487_11533362	3300006315	Marine	MSEYSGCDDFKPLMKSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEAFKKRGYSRKQINELWEKRHISG*
Ga0068503_103580203	3300006340	Marine	MSEYSGCDDFTPMMRSYKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSKVFNKRGLTRKDINKLWKQSHK*
Ga0068503_106136184	3300006340	Marine	MSEYSGCDDFTPMMRSYKRAWFGEKLFVDEYGRAPNLSDVPMTHMTRSQVFKKRGYTRKQINELWKGVKNER*
Ga0100224_10832562	3300006478	Marine	MSEYSGCDDFKPLMKSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEAFKKRGYSRKQINELW
Ga0100228_10230963	3300006565	Marine	MSEYSGCDDFKPLMRPYKKAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYSRKQINELWEKRHISG*
Ga0100228_10236522	3300006565	Marine	MSEYSGCDDFKPLMKSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEAFKKRGYSRKQINELWEKRHQDV*
Ga0100228_10342005	3300006565	Marine	MSEYSGCDDFKPLMRPYKRAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYSRKQINELWEKRHISG*
Ga0100228_12327912	3300006565	Marine	MSEYQGCDDFTPLMKSYKKAWFGEKLFVDEYGRDPNLSDVPMTYMTRSEAFKKRGYTRKQIDELWKERNEQLR*
Ga0098035_10103312	3300006738	Marine	MSEYSECDDFRPLMVSHKRAWFGEKLFVDMYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRHKE*
Ga0098035_11338623	3300006738	Marine	MSEYSGCDDFTPLTRSYKRAWFSEKLFVDIYGRDYNLSDVPMTYMTRSEAFKKRGYTRKQINELWKGV*
Ga0098058_11570052	3300006750	Marine	MSEYSGCDNFTPLTRSYKRSWFKEKLFVDIYGRAPNLSDVPMTYMTRSEAFKKRGYNRNQINKLWEERNKNEL*
Ga0098040_10126283	3300006751	Marine	MSEYSGCDDFTPLTRSYKRAWFSEKLFVDIYGRDYNLSDVPMTYMTRSEAFKKRGYTRKQINELWKGVKNER*
Ga0098040_10182743	3300006751	Marine	MSEYSGCDDFTPLTRSYKRAWFEEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGYNRNQINKLWEERNKNEL*
Ga0098040_10348532	3300006751	Marine	MSEYQGCDDFRPLMVSHKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRHKE*
Ga0098044_12715543	3300006754	Marine	MSEYSGCDDFTPLTRSYKRAWFSEKLFVDIYGRDYNLSDVPMTYMTRSEAFKKRGYTRKQINELWKGVKNERQKKDD*
Ga0098055_12453022	3300006793	Marine	MSEYQGCDDFRPLMVSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHNQYE*
Ga0098055_13035222	3300006793	Marine	MSEYSGCDDFTPLTRSYKRAWFEEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWNEYTGIDLNRTLNFV*
Ga0066376_101521544	3300006900	Marine	MSEYAGCNDFTPLMKSYKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEVFKKRGYTRKQINELWKGVKNER*
Ga0066372_100688241	3300006902	Marine	MSEYSGCDDFTPLTRSYKRAWFSEKLFVDIYGRDYNLSDVPMTYMTRSEAFKKRGYTRKQINELWK
Ga0098053_10687843	3300006923	Marine	YSGCDDFTPLTRSYKRAWFSEKLFVDIYGRDYNLSDVPMTYMTRQDAFKTRGYGKKMVKQLWREKIRAIKEEQYER*
Ga0098034_10873633	3300006927	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHKNEL*
Ga0105668_10585031	3300007758	Background Seawater	MSEYTGCDDFTPLMTSYKKAWFGEKLFVDEYGRAPNLSDVPMTYMTRSKVFNKRGLTRKDINKLWKQSHK*
Ga0117901_11503023	3300009103	Marine	MSEYEGCDDFKPLMRPYKRAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYSRKEINKLWEERHNEL*
Ga0117902_13505142	3300009104	Marine	MSEYSGCDDFTPMIRSYKRAWFGEKLFVDMYGRAPNLSDVPMTYMTRSEVFKKRGYNRNQINKLWEERNKNEL*
Ga0114996_105439131	3300009173	Marine	VSEYAGCDDFTPMIRSYKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEVFKKRRYSRKQINELWN
Ga0114996_106901792	3300009173	Marine	MSEYAGCDDFTPLMKSYKKAWFGEKLFVDEFGRPPNLSDVPMTYMTRSEVYKKRGYNRKQINELWNERKDD*
Ga0114993_102595053	3300009409	Marine	VSEYTGCDDFTPLTRSYKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEVFKKRRYSRKQINELWNGRKDD*
Ga0114997_103721253	3300009425	Marine	VSEYTGCDDFTPLTRSYKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEVFKKLGLARKDINKLWEQSHK*
Ga0114932_100067393	3300009481	Deep Subsurface	MSEYQGCDDFTPLMKSYKKAWFGEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYTRKQIDELWKERNEQLR*
Ga0114932_1001023216	3300009481	Deep Subsurface	MSEYSGCDDFSLLMKSYKKAWFNEKLFVDEYGREPNLSDVPMTFMTRSEVFKKRGLTRKEINKMWEQSYKR*
Ga0114999_109923072	3300009786	Marine	CDDFTPLMKSYKKAWFGEKLFVDEFGRPPNLSDVPMTYMTRSEVYKKRGYNRKQINELWNERKDD*
Ga0098061_11503332	3300010151	Marine	MSEYSGCDNFTPLTRSYKRSWFKEKLFVDIYGRAPNLSDVPMTYMTRSEAFKKRGYTRKQINELWETK*
Ga0098061_12278642	3300010151	Marine	MSEYQGCDDFTPLTRSYKRAWFEEKLFVDTYGRASNLSDVPMTYMTRSEAFKKRGYNRNQINKLWEERNKN
Ga0163108_100829423	3300012950	Seawater	MSEYSGCDDFTPLRRSYKRSWFQEKLFVDMYGRDYNLSDVSMTYMTRSEAFKKRGYTRKQINELWNERYKWWAENKGI*
Ga0181432_10992853	3300017775	Seawater	MSEYSGCDDFTPMMRSYKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRREVFKKRGYTRKQINELWKGVKNER
Ga0211542_10357782	3300020312	Marine	MSEYSGCDDFKPLMRSHKRSWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYSRKEINKLWEERYND
Ga0211502_10828641	3300020332	Marine	MSEYEGCDDFKPLMRPYKRAWFNEKLFVDTYGREPNLSDVPMTYMTRSEVFKKRGYSRKQINELWEKRHRDV
Ga0211613_11380012	3300020353	Marine	MSEYQGCDDFKPLMRPYKRAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYSRKEINKLWNERHND
Ga0211531_10470351	3300020361	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDMYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRHKE
Ga0211660_101644732	3300020373	Marine	DDFRPLMVSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHNQYE
Ga0211575_101603222	3300020407	Marine	MSEYSGCDDFTPLRRSYKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSKVFNKRGLTRKDINKLWKQSHK
Ga0211587_100112493	3300020411	Marine	MSEYSGCDDFKPLMRSHKRAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYNRKQINELWEKRHTSG
Ga0211553_101274852	3300020415	Marine	MSEYAGCDDFTPLMRSYKKSWFGEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGYTRKQINELWEQSHPDE
Ga0211525_101808172	3300020423	Marine	MSEYSGCDDFTPLRRSYKRSWFQEKLFVDMYGRDYNLSDVSMTYMTRSEAFKKRGYTRKQINELWNERYKWWAENKGI
Ga0211578_104634092	3300020444	Marine	MSEYAGCDDFTPLIRSYKRAWFNEKLFVDTYGRAPNLSDVPMTYMTRSKVFKKRGYSRKQINELWDKE
Ga0211550_102074912	3300020453	Marine	MSEYSGCDDFSLLMKSYKKAWFNEKLFVDEYGREPNLSDVPMTFMTRSEVFKKRGLTRKEINKMWEQSYKR
Ga0211543_103656062	3300020470	Marine	MSEYEGCDDFTPLMRSHKKAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYNRKQINELWEKR
Ga0211543_105525463	3300020470	Marine	MSEYSGCDDFKPLMRSHKRAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYNRKQINELWEKR
Ga0211614_105384362	3300020471	Marine	PLMRPYKRAWFDEKLFVDTYGREPNLSDVPMTYMTRSEVFKKRGYSRKQINELWNERHNNVKK
Ga0211585_104484841	3300020477	Marine	DFTPLMKSYKKAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYTRKQIDELWKERNEQLR
Ga0211503_102077553	3300020478	Marine	MSEYSGCDDFKPLMRPYKRAWFNEKLFVDTYGREPNLSDVPMTYMTRSEVFKKRGYNRKQINELWEERNESIR
Ga0211503_103379663	3300020478	Marine	MSEYEGCDDFTPLMRSHKKAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYNRKQINELWEKRHQDV
Ga0206678_101136462	3300021084	Seawater	MSEYSGCDNFTPLTRSYKRSWFKEKLFVDIYGRAPNLSDVPMTYMTRSEAFKKRGYTRKQINELWETK
Ga0206683_105311031	3300021087	Seawater	MSEYSGCDDFTPIRRSYKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRAKGE
Ga0206680_103950842	3300021352	Seawater	CDDFTPLRRSYKRSWFQEKLFVDIYGRVPNLSDVPMTYMTRSKVFKKRGYSRKQINELWDKE
Ga0206685_100051725	3300021442	Seawater	MSEYAGCDDFTPLIRSYKRAWFNEKLFVDTYGRAPNLSDVPMTYMTRSKVFKKRGYSRKQINELWERNHKNEL
Ga0226832_100022859	3300021791	Hydrothermal Vent Fluids	MSEYSGCDDFKPLMVSHKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEAFKKRGYTRKQINELWEQSHK
Ga0226832_100632652	3300021791	Hydrothermal Vent Fluids	MSEYSGCDDFTPLRRSYKRSWFQEKLFVDTYGRPPNLSDVPMTYMTRSKVFKKRGYTRKQINELWERNHKNEL
Ga0226832_104638112	3300021791	Hydrothermal Vent Fluids	MSEYSGCDDFTSLRRSYKRSWFGEKLFVDMYGRAPNLSDVPMTYMTRSEVFKKRGYTRKHINELWKGVKNER
Ga0187827_100571599	3300022227	Seawater	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHKNEL
(restricted) Ga0233437_13945592	3300024259	Seawater	VSEYTGCDDFTPLTRSYKRAWFGEKLFVDMYGRERNLSDVPMTYMTRSEVFKKRRYSRKQINELWSGGEK
Ga0209992_100451612	3300024344	Deep Subsurface	MSEYQGCDDFTPLMKSYKKAWFGEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYTRKQIDELWKERNEQLR
Ga0208012_10318022	3300025066	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHNQYE
Ga0208011_10090504	3300025096	Marine	MSEYSGCDDFTPLTRSYKRAWFEEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGYNRNQINKLWEERNKNEL
Ga0208011_10235554	3300025096	Marine	MSEYSGCDDFTPLTRSYKRAWFSEKLFVDIYGRDYNLSDVPMTYMTRSEAFKKRGYTRKQINELWKGVKNER
Ga0208011_10367492	3300025096	Marine	MSEYQGCDDFRPLMVSHKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRHKE
Ga0208433_10152872	3300025114	Marine	MSEYSECDDFRPLMVSHKRAWFGEKLFVDMYGRAPNLSDVPMTYMTRSEAFKKRGLTRKEINKLWEKRHKE
Ga0208790_10109873	3300025118	Marine	MSEYSGCDDFTPLTRSYKRAWFSEKLFVDIYGRDYNLSDVPMTYMTRSEAFKKRGYTRKQINELWKGVKNERQKKDD
Ga0209644_10627112	3300025125	Marine	MSEYAGCDDFTPLMTSYKKTWFGEKLFVDEYGRAPNLSDVPMTHMTRSQVFKKRGYTRKQINELWKGVKNERQKKDD
Ga0209128_10034872	3300025131	Marine	MSEYQGCDDFTPLTRSYKRAWFEEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGYNRNQINKLWEERNKNEL
Ga0208408_10221593	3300026260	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHKNEL
Ga0208766_11193862	3300026269	Marine	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDEYGRAPNLSDVPMTYMTRSEVFKKRGYSRKDINELWKERHNQYE
Ga0208764_100366872	3300026321	Marine	MSEYEGCDDFKPLMKSHKKEWFGEKLFVDEYGRAPNLSDVPMTFMTRSEVFKKRGYTRKQINELWNGKHND
Ga0209554_11152843	3300027685	Marine	RQMSEYAGCNDFTPLMKSYKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEVFKKRGYTRKQINELWKGVKNER
Ga0209554_11554632	3300027685	Marine	MSEYAGCNDFTPLMKSYKRAWFGEKLFVDMYGRVPNLSDVPMTYMTRSEVFKKRGLTRKGINKLWEQRSEK
Ga0209815_10591613	3300027714	Marine	MSEYAGCDDFTPLMKSYKRSWFGEKLFVDEYGRAPNLSDVPMTYMTRSKVFKKRGLTRKQINELWNKRRLK
Ga0209709_100864643	3300027779	Marine	MSEYAGCDDFTPLMKSYKKAWFGEKLFVDEFGRAPNLSDVPMTYMTRSKVFKKRGYSRKQINELWNKRRLK
Ga0209089_100435304	3300027838	Marine	VSEYAGCDDFTPMIRSYKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEVFKKRRYSRKQINELWNERSKNEL
Ga0209089_101413782	3300027838	Marine	MSEYAGCDDFTPLMKSYKKAWFGEKLFVDEFGRPPNLSDVPMTYMTRSEVYKKRGYNRKQINELWNERKDD
Ga0209089_103112462	3300027838	Marine	VSEYTGCDDFTPLTRSYKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEVFKKQRYSRKQINELWNGRKDD
Ga0209403_101241732	3300027839	Marine	VSEYAGCDDFTPMIRSYKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEVFKKRRYSRKQINELWNGRMDD
Ga0209501_100271561	3300027844	Marine	VSEYAGCDDFTPMIRSYKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEVFKKRRYSRKQINELWNKRRSK
Ga0257107_10097602	3300028192	Marine	VSEYSGCDDFTPLTRSYKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEVFKKRRYSRKQINELWEQSHTVE
Ga0183748_10022695	3300029319	Marine	MSEYSGCDDFKPLMRPYKRAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYNRKQINELWEKRHTSG
Ga0302122_102747772	3300031675	Marine	MSEYQGCDDFTPLRRSYKKQWFKEKLFVDIYGREPNLSDIPMTYMTRSEVFKKRHFSRKQINKLWKQEHK
Ga0315319_104465941	3300031861	Seawater	MSEYAGCDDFTPLMTSYKKAWFGEKLFVDMYGREPNLSDVPMTYMTRSESFKKQSFDKKKINELYNKDQNTIIIDGC
Ga0315318_105618312	3300031886	Seawater	MSEYSGCDDFTPIMRSYKKAWFNEKLFVDEFGRAPNLSDVPMTYMTRSEIFKKRGLTRKEINEMWKQSHKE
Ga0315318_106349502	3300031886	Seawater	MSEYAGCDDFTPLMTSYKKAWFGEKLFVDMYGREPNLSDVPMTYMTRSEAFKKRGFSRKKINKLWEQSHKQ
Ga0310344_103530303	3300032006	Seawater	MSEYSGCDDFKPLMRPYKKAWFNEKLFVDTYGREPNLSDVPMTYMTRSEAFKKRGYSRKQINELWEKRHISG
Ga0310344_105971682	3300032006	Seawater	MSEYSGCDDFKPLMKSHKRAWFGEKLFVDEYGREPNLSDVPMTYMTRSEAFKKRGYSRKQINELWEKRHISD
Ga0315327_1000162015	3300032032	Seawater	MSEYSGCDDFTPIRRSYKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEAFKKRGYTRKQINELWETK
Ga0315329_101296454	3300032048	Seawater	MSEYAGCDDFTPLMTSYKKAWFGEKLFVDMYGREPNLSDVPMTYMTRSKVFKKRGYSRKQINELWERNHKNEL
Ga0315329_107204153	3300032048	Seawater	VSEYSGCDDFTPMIRSYKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEVFKKRRYSRKQINELWNERK
Ga0315338_100669219	3300032138	Seawater	MSEYVGCDDFTPLRRSYKRSWFQEKLFVDIYGRVPNLSDVPMTYMTRSKVFKKRGYSRKQINELWDKE
Ga0315338_10076052	3300032138	Seawater	MSEYSGCDDFRPLMVSHKRAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEVFKKRGYSRKEINKLWKQRHKGE
Ga0315338_10251345	3300032138	Seawater	MSEYAGCDDFTPLMTSYKKAWFGEKLFVDMYGREPNLSDVPMTYMTRSEAFKKRGFSRKKINKLWEQSHNGE
Ga0315338_10312543	3300032138	Seawater	MNKIDYLDRGGYAGCDDFTPLMTSYKKAWFGEKLFVDTYGRAPNLSDVPMTYMTRSEVFKKRGYSRKQINELWKGVKNEL
Ga0372840_101869_342_560	3300034695	Seawater	MSEYSGCDDFTPLTRSYKRAWFGEKLFVDTYGRPPNLSDVPMTYMTRSEVFKKRRYSRKQINELWEQSHTVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters